Citrus Sinensis ID: 017052
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 378 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LEB2 | 381 | Alcohol dehydrogenase-lik | yes | no | 0.997 | 0.989 | 0.763 | 1e-180 | |
| P14675 | 380 | Alcohol dehydrogenase 3 O | N/A | no | 0.989 | 0.984 | 0.560 | 1e-123 | |
| P14674 | 380 | Alcohol dehydrogenase 2 O | N/A | no | 0.973 | 0.968 | 0.564 | 1e-122 | |
| P14673 | 380 | Alcohol dehydrogenase 1 O | N/A | no | 0.989 | 0.984 | 0.557 | 1e-122 | |
| P25141 | 382 | Alcohol dehydrogenase 1 O | N/A | no | 0.973 | 0.963 | 0.565 | 1e-122 | |
| P14219 | 379 | Alcohol dehydrogenase 1 O | N/A | no | 0.973 | 0.970 | 0.559 | 1e-121 | |
| P00333 | 379 | Alcohol dehydrogenase 1 O | N/A | no | 0.973 | 0.970 | 0.553 | 1e-121 | |
| P28032 | 380 | Alcohol dehydrogenase 2 O | N/A | no | 0.989 | 0.984 | 0.55 | 1e-121 | |
| Q2R8Z5 | 379 | Alcohol dehydrogenase 1 O | no | no | 0.973 | 0.970 | 0.553 | 1e-120 | |
| Q75ZX4 | 379 | Alcohol dehydrogenase 1 O | N/A | no | 0.973 | 0.970 | 0.553 | 1e-120 |
| >sp|Q8LEB2|ADHL6_ARATH Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 630 bits (1624), Expect = e-180, Method: Compositional matrix adjust.
Identities = 288/377 (76%), Positives = 341/377 (90%)
Query: 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA 61
S+S +QPQVITC AAVAW AG+PLV+EEVEV+PPQP EIRIKVVCTSLCRSD++AWE+Q+
Sbjct: 5 SSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS 64
Query: 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
+ PRIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+
Sbjct: 65 LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERK 124
Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG 181
G+MHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV +APL KICLLSCG++AG
Sbjct: 125 GLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAG 184
Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
LGAAWNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++I+GVD NP K E+AK FGVT+
Sbjct: 185 LGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTD 244
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
F+N ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK KP
Sbjct: 245 FINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKP 304
Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAF 361
EV+AHYGLFLSG++LKG+LFGGWKPK+DLPSL+++Y+ KE M+DEFITHNL F++IN+AF
Sbjct: 305 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAF 364
Query: 362 NLMKEGKCLRSVIHMPK 378
LM+EGKCLR V+HMPK
Sbjct: 365 VLMREGKCLRCVLHMPK 381
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Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1 |
| >sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/380 (56%), Positives = 280/380 (73%), Gaps = 6/380 (1%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
MST++ Q VI CKAAVAW AG+PLV+EEV+V PPQ E+R+K++ TSLC +D+ WE +
Sbjct: 1 MSTTVGQ--VIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAK 58
Query: 61 A---IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG 117
+FPRI GHEA+GIVESVG GVTE G+HVL VF GECK C CKS++SN C +L
Sbjct: 59 GQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLR 118
Query: 118 LER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC 176
+ RGVM +D Q+RFSI GKP+YH+ S+FSEYTVVH GC K++ +APL+K+C+LSC
Sbjct: 119 INTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178
Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
G+S GLGA NVA +KGS+V IFGLG VGL+ A+GA+ GASRIIGVD N + E+AK
Sbjct: 179 GISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238
Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
FGVTEF+NP D ++PVQ+VI +TDGG D S EC G + +A + DGWG+AV +GV
Sbjct: 239 FGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298
Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFED 356
P + H FL+ RTLKG+ FG +KP++D+PS+V +Y+ KE +++FITH L F +
Sbjct: 299 PHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAE 358
Query: 357 INQAFNLMKEGKCLRSVIHM 376
IN+AF+LM +G+ LR +I M
Sbjct: 359 INKAFDLMLKGEGLRCIITM 378
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Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/372 (56%), Positives = 275/372 (73%), Gaps = 4/372 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
QVI CKAAVAW AG+PLV+EEV+V PPQ E+R+K++ TSLC +D+ WE + +FPR
Sbjct: 7 QVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR 66
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
I GHEA+GIVESVG GVTE G+HVL VF GECK C CKS++SN C +L + RGVM
Sbjct: 67 ILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVM 126
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
+D Q+RFSI GKP+YH+ S+FSEYTVVH GC K++ +APL+K+C+LSCG+S GLGA
Sbjct: 127 INDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGA 186
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
NVA +KGS+V IFGLG VGL+ A+GA+ GASRIIGVD N + E+AK FGVTEF+N
Sbjct: 187 TLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVN 246
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D ++PVQ+VI +TDGG D S EC G + +A + DGWG+AV +GVP +
Sbjct: 247 PKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFK 306
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
H FL+ RTLKG+ FG +KP++D+PS+V +Y+ KE +++FITH L F +IN+AF+LM
Sbjct: 307 THPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLM 366
Query: 365 KEGKCLRSVIHM 376
+G+ LR +I M
Sbjct: 367 LKGEGLRCIITM 378
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Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/380 (55%), Positives = 279/380 (73%), Gaps = 6/380 (1%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
MST++ Q VI CKAAVAW AG+PLV+EEV+V PPQ E+R+K++ TSLC +D+ WE +
Sbjct: 1 MSTTVGQ--VIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAK 58
Query: 61 A---IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG 117
+FPRI GHEA+GIVESVG GVTE G+HVL VF GECK C CKS++SN C +L
Sbjct: 59 GQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLR 118
Query: 118 LER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC 176
+ RGVM +D Q+RFSI GKP+YH+ S+FSEYTVVH GC K++ +APL+K+C+LSC
Sbjct: 119 INTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178
Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
G+S GLGA NVA +KGS+V IFGLG VGL+ A+GA+ GASRIIGVD N + E+AK
Sbjct: 179 GISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238
Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
FGVTEF+NP D ++PVQ+VI +TDGG D S EC G + +A + DGWG+AV +GV
Sbjct: 239 FGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298
Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFED 356
P + H L+ RTLKG+ FG +KP++D+PS+V +Y+ KE +++FITH L F +
Sbjct: 299 PHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAE 358
Query: 357 INQAFNLMKEGKCLRSVIHM 376
IN+AF+LM +G+ LR +I M
Sbjct: 359 INKAFDLMLKGEGLRCIITM 378
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Solanum tuberosum (taxid: 4113) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/373 (56%), Positives = 273/373 (73%), Gaps = 5/373 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
QVI CKAAVAW AG+PLV+EEVEV PPQ E+R+K++ TSLC +D+ WE + +FPR
Sbjct: 8 QVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPR 67
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVM 124
IFGHEA GIVESVG GVT+ G+HVL VF GEC+ CR CKS++SN C++L + RGVM
Sbjct: 68 IFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVM 127
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
D QTRFS GKP+YH+ S+FSEYTV HSGC K+ APL+K+C+LSCG+S GLGA
Sbjct: 128 IHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGA 187
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
NVA +KGSTV IFGLG VGL+ A+GA+ GASRIIGVD NP + AK FGVTEF+N
Sbjct: 188 TLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVN 247
Query: 245 PNDN-NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
P D+ ++PVQQVI +TDGG D S EC G+ + +A + DGWG+AV +GVP
Sbjct: 248 PKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAF 307
Query: 304 AAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNL 363
H L+ RTLKG+ FG +KPK+D+PS+V++Y+KKE +++FITH + F +IN+AF+
Sbjct: 308 KTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDY 367
Query: 364 MKEGKCLRSVIHM 376
M +G+ +R +I M
Sbjct: 368 MLKGESIRCMITM 380
|
This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration. Petunia hybrida (taxid: 4102) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P14219|ADH1_PENAM Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/372 (55%), Positives = 274/372 (73%), Gaps = 4/372 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
+VI CKAAVAW AG+PL +EEVEV PPQ E+R+K++ TSLC +D+ WE + +FPR
Sbjct: 6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKGQTPVFPR 65
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
IFGHEA GI+ESVG GVT+ G+HVL VF GECK C CKS +SN C++L + RGVM
Sbjct: 66 IFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTVRGVM 125
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
D ++RFSI GKP+YH+ S+FSEYTV+H GC K++ APL+K+C+LSCG+S GLGA
Sbjct: 126 IGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGA 185
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
+ NVA KGSTV IFGLG VGL+ A+GA+ GASRIIGVD NP + E+AK FG TEF+N
Sbjct: 186 SINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVN 245
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D+N+PVQ+V+ +T+GG D S EC G+ + A + DGWG+AV +GVP E
Sbjct: 246 PKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFK 305
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
H FL+ RTLKG+ FG +KP+TDLP++V Y+KKE V++FITH++ F +IN+AF+LM
Sbjct: 306 THPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINKAFDLM 365
Query: 365 KEGKCLRSVIHM 376
+G+ +R +I M
Sbjct: 366 AKGEGIRCIIRM 377
|
Pennisetum americanum (taxid: 4543) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P00333|ADH1_MAIZE Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 274/372 (73%), Gaps = 4/372 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
+VI CKAAVAW AG+PL +EEVEV PPQ E+R+K++ TSLC +D+ WE + +FPR
Sbjct: 6 KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPR 65
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
IFGHEA GI+ESVG GVT+ G+HVL VF GECK C CKS +SN C++L + RGVM
Sbjct: 66 IFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVM 125
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
+D ++RFSI GKP+YH+ S+FSEYTV+H GC K++ APL+K+C+LSCG S GLGA
Sbjct: 126 IADGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYSTGLGA 185
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
+ NVA KGSTV +FGLG VGL+ A+GA+ GASRIIGVD NP + E+A+ FG TEF+N
Sbjct: 186 SINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVN 245
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D+N+PVQ+V+ +T+GG D S EC G+ + A + DGWG+AV +GVP E
Sbjct: 246 PKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFK 305
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
H FL+ RTLKG+ FG +KP+TDLP++V Y+KKE V++FITH++ F +IN+AF+LM
Sbjct: 306 THPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLM 365
Query: 365 KEGKCLRSVIHM 376
+G+ +R +I M
Sbjct: 366 AKGEGIRCIIRM 377
|
Zea mays (taxid: 4577) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|P28032|ADH2_SOLLC Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/380 (55%), Positives = 279/380 (73%), Gaps = 6/380 (1%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
MST++ Q VI CKAAVAW AG+PLV+EEV+V PPQ E+R+K++ TSLC +D+ WE +
Sbjct: 1 MSTTVGQ--VIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAK 58
Query: 61 A---IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG 117
+FPRI GHEA+GIVESVG GVT+ G+HVL VF GECK C CKS++SN C +L
Sbjct: 59 GQNPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLR 118
Query: 118 LER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC 176
+ RGVM +D ++RFSI G P+YH+ S+FSEYTVVH GC K++ +APL+K+C+LSC
Sbjct: 119 INTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178
Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
G+S GLGA+ NVA +KGS+V IFGLG VGL+ A+GA+ GASRIIGVD N + E+AK
Sbjct: 179 GISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238
Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
FGVTEF+NP D ++PVQ+VI +TDGG D S EC G + +A + DGWG+AV +GV
Sbjct: 239 FGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298
Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFED 356
P + H FL+ RTLKG+ FG +KP++D+P +V +Y+ KE +++FITH L F +
Sbjct: 299 PHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAE 358
Query: 357 INQAFNLMKEGKCLRSVIHM 376
IN+AF+LM +G+ LR +I M
Sbjct: 359 INKAFDLMLKGEGLRCIITM 378
|
Solanum lycopersicum (taxid: 4081) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q2R8Z5|ADH1_ORYSJ Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 271/372 (72%), Gaps = 4/372 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
+VI CKAAVAW A +PLV+EEVEV PPQ E+R+K++ TSLC +D+ WE + +FPR
Sbjct: 6 KVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPR 65
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
IFGHEA GIVESVG GVT+ G+HVL VF GECK C CKS +SN C++L + RGVM
Sbjct: 66 IFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVM 125
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
D ++RFSI GKP+YH+ S+FSEYTV+H GC K++ APL+K+C+LSCG+S GLGA
Sbjct: 126 IGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGA 185
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
NVA KGSTV IFGLG VGL+ A+GA+ GASRIIG+D N + E+A+ FG TEF+N
Sbjct: 186 TINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVN 245
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D+++PVQQV+ +T+GG D S EC G+ + A + DGWG+AV +GVP E
Sbjct: 246 PKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFK 305
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
H FL+ RTLKG+ FG +KP+TDLP++V Y+KKE V++FITH++ F +IN AF+LM
Sbjct: 306 THPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLM 365
Query: 365 KEGKCLRSVIHM 376
+G+ +R +I M
Sbjct: 366 HKGEGIRCIIRM 377
|
Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q75ZX4|ADH1_ORYSI Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/372 (55%), Positives = 271/372 (72%), Gaps = 4/372 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
+VI CKAAVAW A +PLV+EEVEV PPQ E+R+K++ TSLC +D+ WE + +FPR
Sbjct: 6 KVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPR 65
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
IFGHEA GIVESVG GVT+ G+HVL VF GECK C CKS +SN C++L + RGVM
Sbjct: 66 IFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVM 125
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
D ++RFSI GKP+YH+ S+FSEYTV+H GC K++ APL+K+C+LSCG+S GLGA
Sbjct: 126 IGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGA 185
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
NVA KGSTV IFGLG VGL+ A+GA+ GASRIIG+D N + E+A+ FG TEF+N
Sbjct: 186 TINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVN 245
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D+++PVQQV+ +T+GG D S EC G+ + A + DGWG+AV +GVP E
Sbjct: 246 PKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFK 305
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
H FL+ RTLKG+ FG +KP+TDLP++V Y+KKE V++FITH++ F +IN AF+LM
Sbjct: 306 THPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLM 365
Query: 365 KEGKCLRSVIHM 376
+G+ +R +I M
Sbjct: 366 HKGEGIRCIIRM 377
|
Oryza sativa subsp. indica (taxid: 39946) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 378 | ||||||
| 224078958 | 378 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.854 | 0.0 | |
| 356531015 | 374 | PREDICTED: alcohol dehydrogenase-like 6- | 0.989 | 1.0 | 0.812 | 0.0 | |
| 225454573 | 379 | PREDICTED: alcohol dehydrogenase-like 6 | 0.997 | 0.994 | 0.811 | 0.0 | |
| 449515985 | 379 | PREDICTED: alcohol dehydrogenase-like 6- | 0.978 | 0.976 | 0.816 | 0.0 | |
| 449469452 | 379 | PREDICTED: alcohol dehydrogenase-like 6- | 0.978 | 0.976 | 0.813 | 0.0 | |
| 359489892 | 383 | PREDICTED: alcohol dehydrogenase-like 6 | 0.997 | 0.984 | 0.803 | 0.0 | |
| 357498987 | 377 | Alcohol dehydrogenase [Medicago truncatu | 0.992 | 0.994 | 0.797 | 1e-180 | |
| 18420834 | 381 | alcohol dehydrogenase-like 6 [Arabidopsi | 0.997 | 0.989 | 0.763 | 1e-178 | |
| 297812675 | 382 | hypothetical protein ARALYDRAFT_489336 [ | 0.989 | 0.979 | 0.759 | 1e-177 | |
| 21553654 | 381 | alcohol dehydrogenase-like protein [Arab | 0.997 | 0.989 | 0.758 | 1e-176 |
| >gi|224078958|ref|XP_002305695.1| predicted protein [Populus trichocarpa] gi|222848659|gb|EEE86206.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/378 (85%), Positives = 352/378 (93%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
MS+SIKQP VITCKAAVAWGAG+ LV++EVEV+PP P+EIRIKVV TSLCRSDI+A ++
Sbjct: 1 MSSSIKQPNVITCKAAVAWGAGEALVMQEVEVSPPHPQEIRIKVVTTSLCRSDISALDSH 60
Query: 61 AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER 120
AIFPRIFGHEASGIVES+G GVTEF EG+HVLTVF GECKTCRQC S KSN C+VLGLER
Sbjct: 61 AIFPRIFGHEASGIVESIGEGVTEFQEGDHVLTVFTGECKTCRQCMSGKSNMCQVLGLER 120
Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180
RGVMHSDQ TRFSI GKPVYHYCAVSSFSEYTVVH+GCAVKVSS APLEKICLLSCGL+A
Sbjct: 121 RGVMHSDQGTRFSINGKPVYHYCAVSSFSEYTVVHTGCAVKVSSAAPLEKICLLSCGLAA 180
Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGA+ RGAS+IIGVDTNPEKC+KAK FG+T
Sbjct: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGARIRGASQIIGVDTNPEKCDKAKDFGIT 240
Query: 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300
EF+NPND NEP+QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGL VTLGVPK+K
Sbjct: 241 EFINPNDCNEPIQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLTVTLGVPKVK 300
Query: 301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQA 360
PEV+AHYGLFLSGRTLKGSLFGGWKPK+DLPSLV+ Y+ KE +DEFITHNL FE+IN+A
Sbjct: 301 PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDMYMNKEIQIDEFITHNLPFEEINKA 360
Query: 361 FNLMKEGKCLRSVIHMPK 378
F LM+EGKCLR VIHMPK
Sbjct: 361 FELMREGKCLRCVIHMPK 378
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356531015|ref|XP_003534074.1| PREDICTED: alcohol dehydrogenase-like 6-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/374 (81%), Positives = 341/374 (91%)
Query: 5 IKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFP 64
+ PQVITCKAAVAW AG+ LV+EEVEV+PPQP EIRIKVV TSLCRSD++AWE+ AIFP
Sbjct: 1 MSSPQVITCKAAVAWRAGEALVMEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFP 60
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
RIFGHEASGIVESVG GVTEF EG+HVLTVFIGEC +CRQC S KSNTC++LGLERRG+M
Sbjct: 61 RIFGHEASGIVESVGQGVTEFKEGDHVLTVFIGECMSCRQCTSGKSNTCQILGLERRGLM 120
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
HSDQ+TRFS+KGKPVYHYCAVSSFSEYTVVHSGCAVKVS +APLEKICLLSCG++AGLGA
Sbjct: 121 HSDQKTRFSLKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPLAPLEKICLLSCGVAAGLGA 180
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
AWNVAD+SKGSTVVIFGLGTVGLSVAQ +K RGASRIIGVD NP+KCE AKAFGVTE ++
Sbjct: 181 AWNVADVSKGSTVVIFGLGTVGLSVAQASKLRGASRIIGVDNNPQKCENAKAFGVTEVVD 240
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
PN EP+ QVIKRITDGGAD+SFEC+GDT ITTALQSCCDGWGL VTLGVPK+KPE++
Sbjct: 241 PNSYKEPIAQVIKRITDGGADFSFECVGDTDTITTALQSCCDGWGLTVTLGVPKVKPEMS 300
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
AHYGL L GRTLKGSLFGGWKPK+DLPSLV +YL KE +D++ITHNL F+DIN+AFNLM
Sbjct: 301 AHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYLNKEIQIDDYITHNLSFDDINKAFNLM 360
Query: 365 KEGKCLRSVIHMPK 378
KEG+CLR VIHMP+
Sbjct: 361 KEGECLRCVIHMPR 374
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454573|ref|XP_002263525.1| PREDICTED: alcohol dehydrogenase-like 6 isoform 1 [Vitis vinifera] gi|297737206|emb|CBI26407.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/377 (81%), Positives = 344/377 (91%)
Query: 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA 61
S+SIK P VITC+AAV +GAG+ LV+EEVEV+PPQP EIRIKVV TSLCRSDITAW
Sbjct: 3 SSSIKTPNVITCRAAVGYGAGEALVIEEVEVSPPQPMEIRIKVVSTSLCRSDITAWSQAP 62
Query: 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
IFPRIFGHEASGIVESVG GVTEF EG+HVLT+F GEC TCR C S KSN C+VLGLER+
Sbjct: 63 IFPRIFGHEASGIVESVGEGVTEFEEGDHVLTLFTGECMTCRHCTSGKSNMCQVLGLERK 122
Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG 181
GVMHSDQ+TRFSIKGKP+YHYCAVSSFSEYTVVHSGCA+KVSS+APL+KICLLSCG+SAG
Sbjct: 123 GVMHSDQKTRFSIKGKPIYHYCAVSSFSEYTVVHSGCALKVSSLAPLDKICLLSCGVSAG 182
Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
LGAAW VA+I++GSTVVIFGLGTVGLSVAQGAK RGASRIIGVD N EK EKAKAFG+TE
Sbjct: 183 LGAAWKVANITEGSTVVIFGLGTVGLSVAQGAKQRGASRIIGVDINSEKMEKAKAFGITE 242
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
F+NP+D NEPVQQVIK++TDGGADYSFECIGDTGM+TTALQSCCDGWGL VTLGVPK+ P
Sbjct: 243 FVNPHDCNEPVQQVIKQMTDGGADYSFECIGDTGMVTTALQSCCDGWGLTVTLGVPKVNP 302
Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAF 361
E+++HYGLFLSGRTL+GSLFGGW+PK+DL SLV+ Y++KE +DEFITHNL FEDIN+AF
Sbjct: 303 EISSHYGLFLSGRTLRGSLFGGWRPKSDLHSLVDMYMRKEIQIDEFITHNLPFEDINKAF 362
Query: 362 NLMKEGKCLRSVIHMPK 378
+LM EGKCLR VIHMPK
Sbjct: 363 DLMMEGKCLRCVIHMPK 379
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449515985|ref|XP_004165028.1| PREDICTED: alcohol dehydrogenase-like 6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/370 (81%), Positives = 336/370 (90%)
Query: 8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF 67
P V+TCKAAVAWG GQPLV+EEVEV+PPQP EIR+KVV TSLCRSD++AWETQAIFPRIF
Sbjct: 9 PAVLTCKAAVAWGPGQPLVIEEVEVSPPQPMEIRVKVVSTSLCRSDLSAWETQAIFPRIF 68
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
GHEASG+VESVGPGVTEF+EG+HVLT+F GECKTCR C S KSN C+VLGLERRGVMHSD
Sbjct: 69 GHEASGVVESVGPGVTEFSEGDHVLTLFTGECKTCRHCTSGKSNMCQVLGLERRGVMHSD 128
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
Q+TRFSIKGKP+YHYCAVSSFSEYTVVHSGCAVKVS PLEKICLLSCG++AGLGAAWN
Sbjct: 129 QKTRFSIKGKPIYHYCAVSSFSEYTVVHSGCAVKVSLAVPLEKICLLSCGVAAGLGAAWN 188
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
VADIS+GSTVVI+GLGTVGLSVAQGAK RGAS+IIGVD NPEK E AK FG+T F+NP +
Sbjct: 189 VADISEGSTVVIYGLGTVGLSVAQGAKVRGASQIIGVDINPEKSEIAKTFGITHFVNPKE 248
Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
+E +QQVI RITDGGADY+FECIGDTGMITTALQSCC GWGL VTLGVPK+ PE+ AHY
Sbjct: 249 CSESIQQVINRITDGGADYAFECIGDTGMITTALQSCCQGWGLTVTLGVPKVNPELTAHY 308
Query: 308 GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG 367
G+ LSGRTL+GSLFGGWKPK+DLPSLV+ Y KKE +DE+ITHN+ FEDINQAF LMKEG
Sbjct: 309 GILLSGRTLRGSLFGGWKPKSDLPSLVDMYTKKEIQIDEYITHNISFEDINQAFTLMKEG 368
Query: 368 KCLRSVIHMP 377
KCLR VIH+P
Sbjct: 369 KCLRCVIHLP 378
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449469452|ref|XP_004152434.1| PREDICTED: alcohol dehydrogenase-like 6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/370 (81%), Positives = 336/370 (90%)
Query: 8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF 67
P V+TCKAAVAWG GQPLV+EEVEV+PPQP EIR+KVV TSLCRSD++AWETQAIFPRIF
Sbjct: 9 PAVLTCKAAVAWGPGQPLVIEEVEVSPPQPMEIRVKVVSTSLCRSDLSAWETQAIFPRIF 68
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
GHEASG+VESVGPGVTEF+EG+HVLT+F GECKTCR C S KSN C+VLGLER+GVMHSD
Sbjct: 69 GHEASGVVESVGPGVTEFSEGDHVLTLFTGECKTCRHCTSGKSNMCQVLGLERKGVMHSD 128
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
Q+TRFSIKGKP+YHYCAVSSFSEYTVVHSGCAVKVS PLEKICLLSCG++AGLGAAWN
Sbjct: 129 QKTRFSIKGKPIYHYCAVSSFSEYTVVHSGCAVKVSLAVPLEKICLLSCGVAAGLGAAWN 188
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
VADIS+GSTVVI+GLGTVGLSVAQGAK RGAS+IIGVD NPEK E AK FG+T F+NP +
Sbjct: 189 VADISEGSTVVIYGLGTVGLSVAQGAKVRGASKIIGVDINPEKSEIAKTFGITHFVNPKE 248
Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
+E +QQVI RITDGGADY+FECIGDTGMITTALQSCC GWGL VTLGVPK+ PE+ AHY
Sbjct: 249 CSESIQQVINRITDGGADYAFECIGDTGMITTALQSCCQGWGLTVTLGVPKVNPELTAHY 308
Query: 308 GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG 367
G+ LSGRTL+GSLFGGWKPK+DLPSLV+ Y KKE +DE+ITHN+ FEDINQAF LMKEG
Sbjct: 309 GILLSGRTLRGSLFGGWKPKSDLPSLVDMYTKKEIQIDEYITHNISFEDINQAFTLMKEG 368
Query: 368 KCLRSVIHMP 377
KCLR VIH+P
Sbjct: 369 KCLRCVIHLP 378
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359489892|ref|XP_003633990.1| PREDICTED: alcohol dehydrogenase-like 6 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/381 (80%), Positives = 345/381 (90%), Gaps = 4/381 (1%)
Query: 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--- 58
S+SIK P VITC+AAV +GAG+ LV+EEVEV+PPQP EIRIKVV TSLCRSDITAW
Sbjct: 3 SSSIKTPNVITCRAAVGYGAGEALVIEEVEVSPPQPMEIRIKVVSTSLCRSDITAWSQVN 62
Query: 59 -TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG 117
+ IFPRIFGHEASGIVESVG GVTEF EG+HVLT+F GEC TCR C S KSN C+VLG
Sbjct: 63 SSPHIFPRIFGHEASGIVESVGEGVTEFEEGDHVLTLFTGECMTCRHCTSGKSNMCQVLG 122
Query: 118 LERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCG 177
LER+GVMHSDQ+TRFSIKGKP+YHYCAVSSFSEYTVVHSGCA+KVSS+APL+KICLLSCG
Sbjct: 123 LERKGVMHSDQKTRFSIKGKPIYHYCAVSSFSEYTVVHSGCALKVSSLAPLDKICLLSCG 182
Query: 178 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
+SAGLGAAW VA+I++GSTVVIFGLGTVGLSVAQGAK RGASRIIGVD N EK EKAKAF
Sbjct: 183 VSAGLGAAWKVANITEGSTVVIFGLGTVGLSVAQGAKQRGASRIIGVDINSEKMEKAKAF 242
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
G+TEF+NP+D NEPVQQVIK++TDGGADYSFECIGDTGM+TTALQSCCDGWGL VTLGVP
Sbjct: 243 GITEFVNPHDCNEPVQQVIKQMTDGGADYSFECIGDTGMVTTALQSCCDGWGLTVTLGVP 302
Query: 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI 357
K+ PE+++HYGLFLSGRTL+GSLFGGW+PK+DL SLV+ Y++KE +DEFITHNL FEDI
Sbjct: 303 KVNPEISSHYGLFLSGRTLRGSLFGGWRPKSDLHSLVDMYMRKEIQIDEFITHNLPFEDI 362
Query: 358 NQAFNLMKEGKCLRSVIHMPK 378
N+AF+LM EGKCLR VIHMPK
Sbjct: 363 NKAFDLMMEGKCLRCVIHMPK 383
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357498987|ref|XP_003619782.1| Alcohol dehydrogenase [Medicago truncatula] gi|355494797|gb|AES76000.1| Alcohol dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 635 bits (1638), Expect = e-180, Method: Compositional matrix adjust.
Identities = 299/375 (79%), Positives = 338/375 (90%)
Query: 4 SIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF 63
S PQVITCKAAVAWGAG+ LV+EEVEV+PPQP EIRIKVV TSLCRSD++AWET AIF
Sbjct: 3 SSSTPQVITCKAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWETHAIF 62
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
PRIFGHEASGIVESVG GVTEF EG+ VLTVFIGEC +C+ CKS K+N C+VLGLER+G+
Sbjct: 63 PRIFGHEASGIVESVGLGVTEFKEGDQVLTVFIGECMSCKLCKSGKTNICQVLGLERKGL 122
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
MHSDQ+TRF++KGKPVYHYC VSSFSEYTVVHSGCAVKVS PLEKIC+LSCG+SAGLG
Sbjct: 123 MHSDQKTRFTVKGKPVYHYCGVSSFSEYTVVHSGCAVKVSPHVPLEKICILSCGVSAGLG 182
Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
AAWNVAD+SKGSTVVIFGLGTVGLSVAQGAK RGASRIIGVD NP+KCE AK+FG+TE +
Sbjct: 183 AAWNVADVSKGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPQKCENAKSFGITEVV 242
Query: 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
+P+ EP+ QVIKRITDGGAD+ FEC GDT MITTALQSCCDGWGL VTLGVPK+KPE+
Sbjct: 243 DPSLYKEPIAQVIKRITDGGADFCFECAGDTDMITTALQSCCDGWGLTVTLGVPKVKPEM 302
Query: 304 AAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNL 363
+AHYGLFL+GRTLKGSLFGGWKPKTDLPSLV +Y+ KE +D++ITHNL F++IN+AFNL
Sbjct: 303 SAHYGLFLTGRTLKGSLFGGWKPKTDLPSLVEKYVNKEIQIDDYITHNLSFDEINKAFNL 362
Query: 364 MKEGKCLRSVIHMPK 378
MKEGKCLR VIHM +
Sbjct: 363 MKEGKCLRCVIHMSR 377
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420834|ref|NP_568453.1| alcohol dehydrogenase-like 6 [Arabidopsis thaliana] gi|158563847|sp|Q8LEB2.2|ADHL6_ARATH RecName: Full=Alcohol dehydrogenase-like 6 gi|19310538|gb|AAL85002.1| AT5g24760/T4C12_30 [Arabidopsis thaliana] gi|20334800|gb|AAM16261.1| AT5g24760/T4C12_30 [Arabidopsis thaliana] gi|332005972|gb|AED93355.1| alcohol dehydrogenase-like 6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 288/377 (76%), Positives = 341/377 (90%)
Query: 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA 61
S+S +QPQVITC AAVAW AG+PLV+EEVEV+PPQP EIRIKVVCTSLCRSD++AWE+Q+
Sbjct: 5 SSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS 64
Query: 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
+ PRIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+
Sbjct: 65 LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERK 124
Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG 181
G+MHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV +APL KICLLSCG++AG
Sbjct: 125 GLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAG 184
Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
LGAAWNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++I+GVD NP K E+AK FGVT+
Sbjct: 185 LGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTD 244
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
F+N ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK KP
Sbjct: 245 FINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKP 304
Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAF 361
EV+AHYGLFLSG++LKG+LFGGWKPK+DLPSL+++Y+ KE M+DEFITHNL F++IN+AF
Sbjct: 305 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAF 364
Query: 362 NLMKEGKCLRSVIHMPK 378
LM+EGKCLR V+HMPK
Sbjct: 365 VLMREGKCLRCVLHMPK 381
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297812675|ref|XP_002874221.1| hypothetical protein ARALYDRAFT_489336 [Arabidopsis lyrata subsp. lyrata] gi|297320058|gb|EFH50480.1| hypothetical protein ARALYDRAFT_489336 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust.
Identities = 284/374 (75%), Positives = 339/374 (90%)
Query: 5 IKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFP 64
+QPQVITCKAAVAW AG+PLV+EEVEV+PPQP EIRIKVVCTSLCRSD++AWE Q++ P
Sbjct: 9 FEQPQVITCKAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWEAQSLLP 68
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
RIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+G+M
Sbjct: 69 RIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERKGLM 128
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
HSDQ+TRF+IKGKPVYHYCAVSSFSEYTVVHSGCAVKV +APL KICLLSCG++AGLGA
Sbjct: 129 HSDQKTRFTIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPVAPLHKICLLSCGVAAGLGA 188
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
AWNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++IIGVD NP K E+AK FGVT+F+N
Sbjct: 189 AWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQIIGVDINPAKAEQAKTFGVTDFIN 248
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK+KPEV+
Sbjct: 249 SNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKVKPEVS 308
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
AHYGLFLSG++LKG+LFGGWKPK+DLPSL+ +Y+ KE M+DE +THNL+F++IN+AF+LM
Sbjct: 309 AHYGLFLSGKSLKGTLFGGWKPKSDLPSLIEKYMNKEIMIDELVTHNLVFDEINKAFDLM 368
Query: 365 KEGKCLRSVIHMPK 378
++GKCLR V+HMPK
Sbjct: 369 RDGKCLRCVLHMPK 382
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21553654|gb|AAM62747.1| alcohol dehydrogenase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 286/377 (75%), Positives = 339/377 (89%)
Query: 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA 61
S+S +QPQVITC AAVAW AG+PLV+EEVEV+PPQP EIRIKVVCTSLCRSD++AWE+Q+
Sbjct: 5 SSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS 64
Query: 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
+ PRIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+
Sbjct: 65 LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERK 124
Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG 181
+MHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV +APL KICLLSCG++AG
Sbjct: 125 CLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAG 184
Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
LGAAWNVAD+ KGS+VVIFGLGTVGLSVAQGAK GA++I+GVD NP K E+AK FGVT+
Sbjct: 185 LGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLSGAAQILGVDINPAKAEQAKTFGVTD 244
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
F+N ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK KP
Sbjct: 245 FINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKP 304
Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAF 361
EV+AHYGLFLSG++LKG+LFGGWKPK+DLPSL+++Y+ KE M+DEFITHNL F++IN+AF
Sbjct: 305 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAF 364
Query: 362 NLMKEGKCLRSVIHMPK 378
LM+EGKCLR V+HMPK
Sbjct: 365 VLMREGKCLRCVLHMPK 381
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 378 | ||||||
| TAIR|locus:2184575 | 381 | AT5G24760 [Arabidopsis thalian | 0.997 | 0.989 | 0.697 | 1.5e-147 | |
| TAIR|locus:2025237 | 379 | ADH1 "alcohol dehydrogenase 1" | 0.970 | 0.968 | 0.485 | 6.1e-94 | |
| ZFIN|ZDB-GENE-011003-1 | 376 | adh5 "alcohol dehydrogenase 5" | 0.965 | 0.970 | 0.435 | 6.2e-85 | |
| UNIPROTKB|F1S0C1 | 374 | ADH5 "Uncharacterized protein" | 0.970 | 0.981 | 0.432 | 1e-82 | |
| UNIPROTKB|P11766 | 374 | ADH5 "Alcohol dehydrogenase cl | 0.965 | 0.975 | 0.429 | 2.8e-82 | |
| UNIPROTKB|F1NKS5 | 374 | ADH5 "Uncharacterized protein" | 0.962 | 0.973 | 0.428 | 2e-81 | |
| UNIPROTKB|Q3ZC42 | 374 | ADH5 "Alcohol dehydrogenase cl | 0.970 | 0.981 | 0.422 | 2e-81 | |
| UNIPROTKB|F1NI89 | 370 | ADH5 "Uncharacterized protein" | 0.962 | 0.983 | 0.428 | 2.5e-81 | |
| UNIPROTKB|F1PLM5 | 376 | F1PLM5 "Uncharacterized protei | 0.970 | 0.976 | 0.416 | 1.1e-80 | |
| UNIPROTKB|J9PA83 | 374 | ADH5 "Uncharacterized protein" | 0.970 | 0.981 | 0.416 | 1.1e-80 |
| TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 263/377 (69%), Positives = 312/377 (82%)
Query: 2 STSIKQPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQA 61
S+S +QPQVITC AAVAW AG+ IRIKVVCTSLCRSD++AWE+Q+
Sbjct: 5 SSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS 64
Query: 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
+ PRIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+
Sbjct: 65 LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERK 124
Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXX 181
G+MHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV +APL KI
Sbjct: 125 GLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAG 184
Query: 182 XXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
WNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++I+GVD NP K E+AK FGVT+
Sbjct: 185 LGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTD 244
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
F+N ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK KP
Sbjct: 245 FINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKP 304
Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAF 361
EV+AHYGLFLSG++LKG+LFGGWKPK+DLPSL+++Y+ KE M+DEFITHNL F++IN+AF
Sbjct: 305 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAF 364
Query: 362 NLMKEGKCLRSVIHMPK 378
LM+EGKCLR V+HMPK
Sbjct: 365 VLMREGKCLRCVLHMPK 381
|
|
| TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 181/373 (48%), Positives = 244/373 (65%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQA---IFPR 65
Q+I CKAAVAW AG+ +RIK++ TSLC +D+ WE + +FPR
Sbjct: 6 QIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPR 65
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL--ERRGV 123
IFGHEA GIVESVG GVT+ G+HVL +F GEC CR C S++SN C++L + ER G+
Sbjct: 66 IFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGM 125
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXX 183
+H D ++RFSI GKP+YH+ S+FSEYTVVHSG K++ APL+K+
Sbjct: 126 IH-DGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLG 184
Query: 184 XXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
NVA KG +V IFGLG VGL A+GA+ GASRIIGVD N ++ ++AK FGVTE +
Sbjct: 185 ATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECV 244
Query: 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
NP D+++P+QQVI +TDGG D S EC G + A + DGWG+AV +GVP
Sbjct: 245 NPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAF 304
Query: 304 AAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNL 363
H FL+ RTLKG+ FG +KPKTD+P +V +Y+ KE +++FITH + F +IN+AF+
Sbjct: 305 KTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNKELELEKFITHTVPFSEINKAFDY 364
Query: 364 MKEGKCLRSVIHM 376
M +G+ +R +I M
Sbjct: 365 MLKGESIRCIITM 377
|
|
| ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 161/370 (43%), Positives = 234/370 (63%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
+VI CKAAVAW AG+ +R+K+ T +C +D ++ + + +FP
Sbjct: 6 KVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPEGLFPV 65
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
I GHE +G VESVG GVT+F G+ V+ +++ +C C+ CK+ K+N C+ + + + +G+M
Sbjct: 66 ILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQGLM 125
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
D +RF+ KGK ++H+ S+FSEYTVV KV APL+K+
Sbjct: 126 -PDNTSRFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTGYGA 184
Query: 185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
N A + GST +FGLG VGL+V G K+ GA+RIIG+D NP+K E AK FG TEF+N
Sbjct: 185 AINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGATEFVN 244
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D+++P+Q+V+ +TDGG DYSFECIG+ G++ AL++C GWG +V +GV E++
Sbjct: 245 PKDHSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGAGQEIS 304
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
++GRT KG+ FGGWK +P LVN Y+ K+ MVDEF+TH L F IN+AF+LM
Sbjct: 305 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVNDYMNKKLMVDEFVTHTLPFAQINEAFDLM 364
Query: 365 KEGKCLRSVI 374
GK +R+V+
Sbjct: 365 HAGKSIRAVL 374
|
|
| UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 161/372 (43%), Positives = 231/372 (62%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
QVI CKAAVAW AG+ +RIK++ T++C +D ++ + + FP
Sbjct: 4 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
I GHE +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +G+M
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 124 -PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGA 182
Query: 185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
N A + GST +FGLG VGL+V G K GASRIIGVD N +K +AK FG +E +N
Sbjct: 183 AVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN 242
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C GWG++V +GV E+A
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 302
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
++GRT KG+ FGGWK +P LV+ Y+ K+ VDEF+THNL F+ IN+AF LM
Sbjct: 303 TRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHNLPFDQINEAFELM 362
Query: 365 KEGKCLRSVIHM 376
GK +R+VI +
Sbjct: 363 HAGKSIRTVIKL 374
|
|
| UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 159/370 (42%), Positives = 230/370 (62%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
+VI CKAAVAW AG+ +RIK++ T++C +D ++ + + FP
Sbjct: 4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
I GHE +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +G+M
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 124 -PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
N A + GS +FGLG VGL+V G K GASRIIGVD N +K +AK FG TE +N
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C GWG++V +GV E+A
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 302
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
++GRT KG+ FGGWK +P LV+ Y+ K+ VDEF+THNL F++IN+AF LM
Sbjct: 303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELM 362
Query: 365 KEGKCLRSVI 374
GK +R+V+
Sbjct: 363 HSGKSIRTVV 372
|
|
| UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 158/369 (42%), Positives = 226/369 (61%)
Query: 10 VITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPRI 66
VI CKAAVAW AG+ +RIK+V T+LC +D ++ + + FP I
Sbjct: 5 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHE +GIVESVG GVT+ G+ V+ ++I +C C+ CK+ K+N C+ + + + +G+M
Sbjct: 65 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRVTQGKGLM- 123
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D RF+ KGK +YH+ S+FSEYTVV K+ AP +K+
Sbjct: 124 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GST +FGLG VGL+ G KA GASRIIG+D N KAK FG E ++P
Sbjct: 184 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
D +P+Q+V+ +TDGG DYSFECIG+ G++ AL++C GWG++V +GV E++
Sbjct: 244 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIST 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMK 365
++GRT KG+ FGGWK +P LVN Y+ K+ VDEF+TH L F+ IN+AF+L+
Sbjct: 304 RPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKVDEFVTHTLPFDKINEAFDLLH 363
Query: 366 EGKCLRSVI 374
+GK +R+V+
Sbjct: 364 KGKSIRTVL 372
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| UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 157/372 (42%), Positives = 232/372 (62%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
QVI CKAAVAW AG+ +RIK++ T++C +D ++ + + +P
Sbjct: 4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPV 63
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
I GHE +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +G+M
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 124 -PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
N A + GST +FGLG VGL+V G K GA+RIIGVD N +K +AK FG +E +N
Sbjct: 183 ALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECIN 242
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C GWG++V +GV E+A
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIA 302
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
++GRT KG+ FGGWK +P LV+ Y+ K+ VDEF+TH+L F+ IN+AF+LM
Sbjct: 303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFDLM 362
Query: 365 KEGKCLRSVIHM 376
GK +R+V+ +
Sbjct: 363 HAGKSIRTVVKL 374
|
|
| UNIPROTKB|F1NI89 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 158/369 (42%), Positives = 225/369 (60%)
Query: 10 VITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPRI 66
VI CKAAVAW AG+ +RIK+V T+LC +D ++ + + FP I
Sbjct: 1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHE +GIVESVG GVT+ G+ V+ ++I +C C+ CK+ K+N C+ + + +G+M
Sbjct: 61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKGLM- 119
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
D RF+ KGK +YH+ S+FSEYTVV K+ AP +K+
Sbjct: 120 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 179
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GST +FGLG VGL+ G KA GASRIIG+D N KAK FG E ++P
Sbjct: 180 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 239
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
D +P+Q+V+ +TDGG DYSFECIG+ G++ AL++C GWG++V +GV E++
Sbjct: 240 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIST 299
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMK 365
++GRT KG+ FGGWK +P LVN Y+ K+ VDEF+TH L F+ IN+AF+L+
Sbjct: 300 RPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIKVDEFVTHTLPFDKINEAFDLLH 359
Query: 366 EGKCLRSVI 374
+GK +R+V+
Sbjct: 360 KGKSIRTVL 368
|
|
| UNIPROTKB|F1PLM5 F1PLM5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 155/372 (41%), Positives = 230/372 (61%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
QVI CKAAVAW AG+ +RIK++ T++C +D ++ + + FP
Sbjct: 6 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 65
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
I GHE +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +G+M
Sbjct: 66 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 125
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 126 -PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 184
Query: 185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
N A + GST +FGLG VGL+ G K GASRIIGVD N +K +AK FG +E +N
Sbjct: 185 ALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECIN 244
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C GWG++V +GV E+A
Sbjct: 245 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIA 304
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
++GR KG+ FGGWK +P LV+ Y+ ++ VDEF+TH+L F+ IN+AF+L+
Sbjct: 305 TRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFDLL 364
Query: 365 KEGKCLRSVIHM 376
GK +R+V+ +
Sbjct: 365 HAGKSIRTVVKL 376
|
|
| UNIPROTKB|J9PA83 ADH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 155/372 (41%), Positives = 230/372 (61%)
Query: 9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
QVI CKAAVAW AG+ +RIK++ T++C +D ++ + + FP
Sbjct: 4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
I GHE +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +G+M
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+
Sbjct: 124 -PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
N A + GST +FGLG VGL+ G K GASRIIGVD N +K +AK FG +E +N
Sbjct: 183 ALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECIN 242
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
P D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C GWG++V +GV E+A
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIA 302
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
++GR KG+ FGGWK +P LV+ Y+ ++ VDEF+TH+L F+ IN+AF+L+
Sbjct: 303 TRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIKVDEFVTHSLSFDQINEAFDLL 362
Query: 365 KEGKCLRSVIHM 376
GK +R+V+ +
Sbjct: 363 HAGKSIRTVVKL 374
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P19854 | ADHX_HORSE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4743 | 0.9735 | 0.9839 | yes | no |
| P14674 | ADH2_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5645 | 0.9735 | 0.9684 | N/A | no |
| P14675 | ADH3_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5605 | 0.9894 | 0.9842 | N/A | no |
| A2XAZ3 | ADHX_ORYSI | 1, ., 1, ., 1, ., 2, 8, 4 | 0.5171 | 0.9920 | 0.9842 | N/A | no |
| P14673 | ADH1_SOLTU | 1, ., 1, ., 1, ., 1 | 0.5578 | 0.9894 | 0.9842 | N/A | no |
| P12711 | ADHX_RAT | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4690 | 0.9735 | 0.9839 | yes | no |
| P28032 | ADH2_SOLLC | 1, ., 1, ., 1, ., 1 | 0.55 | 0.9894 | 0.9842 | N/A | no |
| P93629 | ADHX_MAIZE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.5119 | 0.9867 | 0.9790 | N/A | no |
| P48977 | ADH_MALDO | 1, ., 1, ., 1, ., 1 | 0.5564 | 0.9735 | 0.9684 | N/A | no |
| P00333 | ADH1_MAIZE | 1, ., 1, ., 1, ., 1 | 0.5537 | 0.9735 | 0.9709 | N/A | no |
| P80572 | ADHX_PEA | 1, ., 1, ., 1, ., 2, 8, 4 | 0.5215 | 0.9735 | 0.9735 | N/A | no |
| Q4R1E8 | ADH2_ORYSI | 1, ., 1, ., 1, ., 1 | 0.5322 | 0.9735 | 0.9709 | N/A | no |
| Q3ZC42 | ADHX_BOVIN | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4716 | 0.9735 | 0.9839 | yes | no |
| P46415 | ADHX_DROME | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4574 | 0.9814 | 0.9788 | yes | no |
| P11766 | ADHX_HUMAN | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4743 | 0.9735 | 0.9839 | yes | no |
| P25141 | ADH1_PETHY | 1, ., 1, ., 1, ., 1 | 0.5656 | 0.9735 | 0.9633 | N/A | no |
| P05336 | ADH1_HORVU | 1, ., 1, ., 1, ., 1 | 0.5564 | 0.9735 | 0.9709 | N/A | no |
| P12886 | ADH1_PEA | 1, ., 1, ., 1, ., 1 | 0.5295 | 0.9735 | 0.9684 | N/A | no |
| P13603 | ADH1_TRIRP | 1, ., 1, ., 1, ., 1 | 0.5403 | 0.9735 | 0.9684 | N/A | no |
| P17648 | ADH_FRAAN | 1, ., 1, ., 1, ., 1 | 0.5430 | 0.9735 | 0.9684 | N/A | no |
| P04707 | ADH2_MAIZE | 1, ., 1, ., 1, ., 1 | 0.5376 | 0.9735 | 0.9709 | N/A | no |
| P14219 | ADH1_PENAM | 1, ., 1, ., 1, ., 1 | 0.5591 | 0.9735 | 0.9709 | N/A | no |
| P28474 | ADHX_MOUSE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4663 | 0.9735 | 0.9839 | yes | no |
| Q54TC2 | ADHX_DICDI | 1, ., 1, ., 1, ., 2, 8, 4 | 0.4633 | 0.9867 | 0.9841 | yes | no |
| Q75ZX4 | ADH1_ORYSI | 1, ., 1, ., 1, ., 1 | 0.5537 | 0.9735 | 0.9709 | N/A | no |
| P10847 | ADH2_HORVU | 1, ., 1, ., 1, ., 1 | 0.5351 | 0.9523 | 0.9651 | N/A | no |
| Q8LEB2 | ADHL6_ARATH | 1, ., 1, ., 1, ., 1 | 0.7639 | 0.9973 | 0.9895 | yes | no |
| P10848 | ADH3_HORVU | 1, ., 1, ., 1, ., 1 | 0.5392 | 0.9656 | 0.9630 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.983 |
| 4th Layer | 1.1.1.1 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | gw1.IV.2461.1 | alcohol dehydrogenase (EC-1.1.1.1) (377 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | gw1.XI.3391.1 | pyruvate decarboxylase (EC-4.1.1.1) (574 aa) | • | 0.899 | |||||||
 | gw1.V.2645.1 | hypothetical protein (479 aa) | • | 0.899 | |||||||
 | gw1.III.2325.1 | SubName- Full=Putative uncharacterized protein; (514 aa) | • | 0.899 | |||||||
 | gw1.4555.2.1 | annotation not avaliable (88 aa) | • | 0.899 | |||||||
 | gw1.134.62.1 | hypothetical protein (453 aa) | • | 0.899 | |||||||
 | grail3.0005008802 | aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (543 aa) | • | 0.899 | |||||||
 | fgenesh4_pg.C_LG_II000742 | hypothetical protein (480 aa) | • | 0.899 | |||||||
 | eugene3.01840014 | pyruvate decarboxylase (549 aa) | • | 0.899 | |||||||
 | eugene3.00060891 | pyruvate decarboxylase (EC-4.1.1.1) (606 aa) | • | 0.899 | |||||||
 | estExt_fgenesh4_pm.C_LG_XVI0442 | pyruvate decarboxylase (EC-4.1.1.1) (606 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 378 | |||
| PLN02827 | 378 | PLN02827, PLN02827, Alcohol dehydrogenase-like | 0.0 | |
| cd08301 | 369 | cd08301, alcohol_DH_plants, Plant alcohol dehydrog | 0.0 | |
| cd08277 | 365 | cd08277, liver_alcohol_DH_like, Liver alcohol dehy | 1e-179 | |
| cd08300 | 368 | cd08300, alcohol_DH_class_III, class III alcohol d | 1e-171 | |
| PLN02740 | 381 | PLN02740, PLN02740, Alcohol dehydrogenase-like | 1e-168 | |
| cd08299 | 373 | cd08299, alcohol_DH_class_I_II_IV, class I, II, IV | 1e-155 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 1e-145 | |
| cd05279 | 365 | cd05279, Zn_ADH1, Liver alcohol dehydrogenase and | 1e-142 | |
| TIGR02818 | 368 | TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat | 1e-137 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 1e-119 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 2e-89 | |
| cd08281 | 371 | cd08281, liver_ADH_like1, Zinc-dependent alcohol d | 5e-84 | |
| TIGR03989 | 369 | TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa | 3e-83 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 8e-70 | |
| TIGR03451 | 358 | TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi | 2e-62 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 2e-55 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 5e-54 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 2e-50 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 3e-49 | |
| cd08233 | 351 | cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio | 3e-46 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 2e-45 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 3e-45 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 6e-45 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 1e-43 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 3e-43 | |
| cd05278 | 347 | cd05278, FDH_like, Formaldehyde dehydrogenases | 3e-41 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 3e-41 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 1e-40 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 9e-40 | |
| cd08285 | 351 | cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd | 8e-38 | |
| cd05284 | 340 | cd05284, arabinose_DH_like, D-arabinose dehydrogen | 6e-36 | |
| cd05281 | 341 | cd05281, TDH, Threonine dehydrogenase | 2e-35 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 3e-35 | |
| cd08283 | 386 | cd08283, FDH_like_1, Glutathione-dependent formald | 1e-33 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 1e-32 | |
| cd08284 | 344 | cd08284, FDH_like_2, Glutathione-dependent formald | 5e-32 | |
| cd08287 | 345 | cd08287, FDH_like_ADH3, formaldehyde dehydrogenase | 2e-29 | |
| cd08269 | 312 | cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD | 4e-29 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 4e-29 | |
| TIGR00692 | 340 | TIGR00692, tdh, L-threonine 3-dehydrogenase | 4e-29 | |
| cd08282 | 375 | cd08282, PFDH_like, Pseudomonas putida aldehyde-di | 8e-29 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 1e-28 | |
| cd08240 | 350 | cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa | 2e-27 | |
| cd08286 | 345 | cd08286, FDH_like_ADH2, formaldehyde dehydrogenase | 2e-27 | |
| cd08265 | 384 | cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD | 6e-27 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 7e-27 | |
| cd08298 | 329 | cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA | 6e-26 | |
| PRK05396 | 341 | PRK05396, tdh, L-threonine 3-dehydrogenase; Valida | 7e-26 | |
| cd08256 | 350 | cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD | 1e-25 | |
| PRK10309 | 347 | PRK10309, PRK10309, galactitol-1-phosphate dehydro | 2e-24 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 4e-24 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 5e-24 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 6e-24 | |
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 7e-24 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 8e-23 | |
| cd08232 | 339 | cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | 9e-21 | |
| pfam08240 | 108 | pfam08240, ADH_N, Alcohol dehydrogenase GroES-like | 2e-20 | |
| TIGR03201 | 349 | TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1 | 3e-19 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 3e-19 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 5e-19 | |
| cd08262 | 341 | cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD | 9e-19 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 9e-19 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 1e-18 | |
| TIGR03366 | 280 | TIGR03366, HpnZ_proposed, putative phosphonate cat | 1e-18 | |
| PRK09422 | 338 | PRK09422, PRK09422, ethanol-active dehydrogenase/a | 1e-17 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 2e-17 | |
| PRK10083 | 339 | PRK10083, PRK10083, putative oxidoreductase; Provi | 2e-17 | |
| PLN02702 | 364 | PLN02702, PLN02702, L-idonate 5-dehydrogenase | 1e-16 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 3e-16 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 5e-15 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 5e-15 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 4e-14 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 5e-14 | |
| TIGR02819 | 393 | TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas | 6e-13 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 1e-12 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 5e-12 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 7e-12 | |
| cd08242 | 319 | cd08242, MDR_like, Medium chain dehydrogenases/red | 2e-11 | |
| PLN02514 | 357 | PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | 6e-11 | |
| PLN02586 | 360 | PLN02586, PLN02586, probable cinnamyl alcohol dehy | 7e-11 | |
| PRK09880 | 343 | PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro | 4e-10 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 4e-10 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 6e-10 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 2e-09 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 4e-09 | |
| PLN02178 | 375 | PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | 6e-09 | |
| cd08230 | 355 | cd08230, glucose_DH, Glucose dehydrogenase | 4e-08 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 5e-08 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 5e-07 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 7e-07 | |
| cd08252 | 336 | cd08252, AL_MDR, Arginate lyase and other MDR fami | 8e-07 | |
| TIGR02822 | 329 | TIGR02822, adh_fam_2, zinc-binding alcohol dehydro | 1e-06 | |
| TIGR01751 | 398 | TIGR01751, crot-CoA-red, crotonyl-CoA reductase | 1e-06 | |
| cd08247 | 352 | cd08247, AST1_like, AST1 is a cytoplasmic protein | 2e-06 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 3e-06 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 3e-06 | |
| PRK14806 | 735 | PRK14806, PRK14806, bifunctional cyclohexadienyl d | 5e-06 | |
| cd08292 | 324 | cd08292, ETR_like_2, 2-enoyl thioester reductase ( | 1e-05 | |
| pfam02254 | 116 | pfam02254, TrkA_N, TrkA-N domain | 3e-05 | |
| cd08246 | 393 | cd08246, crotonyl_coA_red, crotonyl-CoA reductase | 3e-05 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 5e-05 | |
| COG1748 | 389 | COG1748, LYS9, Saccharopine dehydrogenase and rela | 5e-05 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 7e-05 | |
| cd05288 | 329 | cd05288, PGDH, Prostaglandin dehydrogenases | 7e-05 | |
| PRK01390 | 460 | PRK01390, murD, UDP-N-acetylmuramoyl-L-alanyl-D-gl | 5e-04 | |
| COG0287 | 279 | COG0287, TyrA, Prephenate dehydrogenase [Amino aci | 5e-04 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 6e-04 | |
| cd05300 | 313 | cd05300, 2-Hacid_dh_1, Putative D-isomer specific | 6e-04 | |
| COG0569 | 225 | COG0569, TrkA, K+ transport systems, NAD-binding c | 0.002 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 0.002 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 0.003 | |
| PRK06545 | 359 | PRK06545, PRK06545, prephenate dehydrogenase; Vali | 0.003 | |
| pfam02826 | 175 | pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro | 0.003 | |
| cd01075 | 200 | cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d | 0.003 | |
| PRK08507 | 275 | PRK08507, PRK08507, prephenate dehydrogenase; Vali | 0.004 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 0.004 |
| >gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 734 bits (1896), Expect = 0.0
Identities = 307/378 (81%), Positives = 346/378 (91%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
S+SI QP VITC+AAVAWGAG+ LV+EEVEV+PPQP EIRIKVV TSLCRSD++AWE+Q
Sbjct: 1 SSSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ 60
Query: 61 AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER 120
A+FPRIFGHEASGIVES+G GVTEF +G+HVLTVF GEC +CR C S KSN C+VLGLER
Sbjct: 61 ALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLER 120
Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180
+GVMHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV +APL KICLLSCG++A
Sbjct: 121 KGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAA 180
Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
GLGAAWNVAD+SKGS+VVIFGLGTVGLSVAQGAK RGAS+IIGVD NPEK EKAK FGVT
Sbjct: 181 GLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT 240
Query: 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300
+F+NPND +EP+QQVIKR+T GGADYSFEC+GDTG+ TTALQSC DGWGL VTLGVPK K
Sbjct: 241 DFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK 300
Query: 301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQA 360
PEV+AHYGLFLSGRTLKGSLFGGWKPK+DLPSLV++Y+ KE M+DEFITHNL F++IN+A
Sbjct: 301 PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKA 360
Query: 361 FNLMKEGKCLRSVIHMPK 378
F LM+EGKCLR VIHMPK
Sbjct: 361 FELMREGKCLRCVIHMPK 378
|
Length = 378 |
| >gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 633 bits (1635), Expect = 0.0
Identities = 225/369 (60%), Positives = 285/369 (77%), Gaps = 4/369 (1%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIF 67
ITCKAAVAW AG+PLV+EEVEV PPQ E+RIK++ TSLC +D+ WE +FPRI
Sbjct: 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHS 126
GHEA+GIVESVG GVT+ G+HVL VF GECK CR CKS+KSN C++L + RGVM +
Sbjct: 61 GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
D ++RFSI GKP+YH+ S+FSEYTVVH GC K++ APL+K+CLLSCG+S GLGAAW
Sbjct: 121 DGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAW 180
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
NVA + KGSTV IFGLG VGL+VA+GA+ RGASRIIGVD NP K E+AK FGVTEF+NP
Sbjct: 181 NVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
D+++PVQ+VI +T GG DYSFEC G+ + +A + DGWG+ V LGVP + H
Sbjct: 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTH 300
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKE 366
L+GRTLKG+LFGG+KPKTDLP+LV +Y+KKE +++FITH L F +IN+AF+L+ +
Sbjct: 301 PMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLK 360
Query: 367 GKCLRSVIH 375
G+CLR ++H
Sbjct: 361 GECLRCILH 369
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369 |
| >gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 501 bits (1293), Expect = e-179
Identities = 191/366 (52%), Positives = 254/366 (69%), Gaps = 4/366 (1%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFG 68
I CKAAVAW AG+PLV+EE+EV PP+ E+RIK++ TS+C +DI A E +FP I G
Sbjct: 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILG 60
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
HE +GIVESVG GVT G+ V+ +FIG+C C C+S K+N C+ G+M D
Sbjct: 61 HEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM-PDG 119
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
+RF+ KGK +YH+ S+FS+YTVV K+ APLE +CLL CG S G GAAWN
Sbjct: 120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNT 179
Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
A + GSTV +FGLG VGLS GAK GASRIIGVD N +K EKAK FG T+F+NP D+
Sbjct: 180 AKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239
Query: 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 308
++PV +VI+ +T GG DYSFEC G+ ++ AL+S GWG++V +GVP E++
Sbjct: 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-ELSIRPF 298
Query: 309 LFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK 368
+ GRT KGS FGG+K ++D+P LV++Y+ K+F +DE ITH L FE+IN+ F+LMK G+
Sbjct: 299 QLILGRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE 358
Query: 369 CLRSVI 374
C+R+VI
Sbjct: 359 CIRTVI 364
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 482 bits (1242), Expect = e-171
Identities = 183/369 (49%), Positives = 255/369 (69%), Gaps = 5/369 (1%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW---ETQAIFPRIF 67
ITCKAAVAW AG+PL +EEVEV PP+ E+RIK++ T +C +D + + +FP I
Sbjct: 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHS 126
GHE +GIVESVG GVT G+HV+ ++ EC C+ CKS K+N C ++ + +G+M
Sbjct: 61 GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-P 119
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
D +RFS KGKP+YH+ S+FSEYTVV K++ APL+K+CLL CG++ G GA
Sbjct: 120 DGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVL 179
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
N A + GSTV +FGLG VGL+V QGAKA GASRIIG+D NP+K E AK FG T+ +NP
Sbjct: 180 NTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
D+++P+QQV+ +TDGG DY+FECIG+ ++ AL++C GWG +V +GV E++
Sbjct: 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTR 299
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKE 366
++GR KG+ FGGWK ++ +P LV Y+K + VDEFITH + ++IN+AF+LM
Sbjct: 300 PFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHA 359
Query: 367 GKCLRSVIH 375
GK +R+V+
Sbjct: 360 GKSIRTVVK 368
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368 |
| >gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 475 bits (1224), Expect = e-168
Identities = 199/380 (52%), Positives = 272/380 (71%), Gaps = 13/380 (3%)
Query: 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW----ETQAI 62
Q +VITCKAAVAWG G+PLV+EE+ V+PPQ E+RIK++ TS+C +D++AW E Q
Sbjct: 5 QGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRA 64
Query: 63 FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-R 121
+PRI GHEA+GIVESVG GV + G+HV+ +F GEC CR CK DK+N CE ++ +
Sbjct: 65 YPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFK 124
Query: 122 GVMHSDQQTRFSIK--GKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179
VM +D +TRFS K G+P+YH+ S+F+EYTV+ S C VK+ APL+K+ LLSCG+S
Sbjct: 125 SVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVS 184
Query: 180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
G+GAAWN A++ GS+V IFGLG VGL+VA+GA+ARGAS+IIGVD NPEK EK K G+
Sbjct: 185 TGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244
Query: 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV--- 296
T+F+NP D+++PV + I+ +T GG DYSFEC G+ ++ A S DGWGL V LG+
Sbjct: 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT 304
Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFED 356
PK+ P H GR++ GS+FG +K K+ LP+L + ++ +D FITH L FE
Sbjct: 305 PKMLP---LHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEK 361
Query: 357 INQAFNLMKEGKCLRSVIHM 376
IN+AF L+++GK LR ++H+
Sbjct: 362 INEAFQLLEDGKALRCLLHL 381
|
Length = 381 |
| >gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 440 bits (1134), Expect = e-155
Identities = 178/369 (48%), Positives = 242/369 (65%), Gaps = 4/369 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--AIFPRI 66
+VI CKAAV W +P +EE+EV PP+ E+RIK+V T +CRSD + FP I
Sbjct: 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVI 63
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
GHEA+GIVESVG GVT G+ V+ +F+ +C CR C + +SN C L + +G+M
Sbjct: 64 LGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM- 122
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
D +RF+ KGKP++H+ S+FSEYTVV K+ + APLEK+CL+ CG S G GAA
Sbjct: 123 QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAA 182
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A ++ GST +FGLG VGLS G KA GASRII VD N +K KAK G TE +NP
Sbjct: 183 VNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
D +P+Q+V+ +TDGG D+SFE IG + AL SC +G+G++V +GVP ++
Sbjct: 243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSI 302
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMK 365
+ L L+GRT KG++FGGWK K +P LV Y+ K+F +D ITH L FE IN+ F+L++
Sbjct: 303 NPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLR 362
Query: 366 EGKCLRSVI 374
GK +R+V+
Sbjct: 363 SGKSIRTVL 371
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 415 bits (1068), Expect = e-145
Identities = 168/370 (45%), Positives = 231/370 (62%), Gaps = 8/370 (2%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIF 67
+ +AAVA AG+PL +EEV+++PP+ E+ +++ T +C +D FP +
Sbjct: 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLS-GDDPEGFPAVL 59
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG-LERRGVMHS 126
GHE +GIVE+VG GVT G+HV+ +F EC C+ C S K N CE + + +G M
Sbjct: 60 GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-P 118
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
D TR S G PVYHY S+F+EYTVVH VK+ APLEK CLL CG++ G+GA
Sbjct: 119 DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV 178
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
N A + G TV +FGLG VGL+ QGAKA GA RII VD NPEK E AK FG T F+NP
Sbjct: 179 NTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
+ + V + I +TDGGADY+FEC+G+ ++ AL+ G +V +GV E++
Sbjct: 239 E-VDDVVEAIVELTDGGADYAFECVGNVEVMRQALE-ATHRGGTSVIIGVAGAGQEISTR 296
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKE 366
++GR KGS FGG +P++D+P LV+ Y+ + +D +TH + EDIN+AF+LM E
Sbjct: 297 PFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHE 356
Query: 367 GKCLRSVIHM 376
GK +RSVI
Sbjct: 357 GKSIRSVIRF 366
|
Length = 366 |
| >gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 407 bits (1047), Expect = e-142
Identities = 174/365 (47%), Positives = 236/365 (64%), Gaps = 4/365 (1%)
Query: 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--AIFPRIFGHE 70
CKAAV W G+PL +EE+EV PP+ E+RIKVV T +C +D+ + + P I GHE
Sbjct: 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVILGHE 60
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL-GLERRGVMHSDQQ 129
+GIVES+GPGVT G+ V+ +F +C C+QC + + N C G RG+M SD
Sbjct: 61 GAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGT 119
Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
+RF+ KGKP++H+ S+F+EYTVV K+ APLEK+CL+ CG S G GAA N A
Sbjct: 120 SRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTA 179
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
++ GST +FGLG VGLSV G KA GASRII VD N +K EKAK G TE +NP D +
Sbjct: 180 KVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239
Query: 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL 309
+P+ +V+ +TDGG DY+FE IG + AL + G G +V +GVP E
Sbjct: 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPND 299
Query: 310 FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC 369
L+GRT+KG++FGGWK K +P LV Y +K+F +DE ITH L FE+IN F+LM+ G+
Sbjct: 300 LLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES 359
Query: 370 LRSVI 374
+R+++
Sbjct: 360 IRTIL 364
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 394 bits (1014), Expect = e-137
Identities = 174/367 (47%), Positives = 247/367 (67%), Gaps = 5/367 (1%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD---ITAWETQAIFPRIFGHE 70
+AAVAW AGQPL +EEV+V PQ E+ +++V T +C +D ++ + + +FP I GHE
Sbjct: 3 RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE-VLGLERRGVMHSDQQ 129
+GIVE+VG GVT G+HV+ ++ EC C+ C S K+N C V + +G+M D
Sbjct: 63 GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGT 121
Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
+RFS G+P+YHY S+FSEYTVV K++ APLE++CLL CG++ G+GA N A
Sbjct: 122 SRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA 181
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
+ +G TV +FGLG +GLSV QGA+ ASRII +D NP K E AK G T+ +NPND +
Sbjct: 182 KVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD 241
Query: 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL 309
+P+Q+VI ITDGG DYSFECIG+ ++ AL+ C GWG ++ +GV E++
Sbjct: 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQ 301
Query: 310 FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC 369
++GR +GS FGG K +T+LP +V +Y+K E +D+F+TH + EDIN+AF+LM EGK
Sbjct: 302 LVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS 361
Query: 370 LRSVIHM 376
+R+VIH
Sbjct: 362 IRTVIHY 368
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 348 bits (896), Expect = e-119
Identities = 146/365 (40%), Positives = 206/365 (56%), Gaps = 8/365 (2%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFGHEA 71
+AAV G+PL +EEVE++ P P E+ +++ LC SD+ A P + GHE
Sbjct: 2 RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEG 61
Query: 72 SGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTR 131
+G+VE VGPGVT G+HV+ +I C TCR C + N C+ LG G D R
Sbjct: 62 AGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD-LGAGILGGQLPDGTRR 120
Query: 132 FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADI 191
F+ G+PV C + +F+EYTVV VK+ PL++ LL CG++ G+GA N A +
Sbjct: 121 FTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARV 180
Query: 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251
G TV + G G VGL+ QGA+ GASRII VD PEK E A+ FG T +N ++ ++
Sbjct: 181 RPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE-DDA 239
Query: 252 VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-YGL 309
V+ V + +TDG GADY+FE +G I AL G G AV +G+ V+ L
Sbjct: 240 VEAV-RDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALEL 297
Query: 310 FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC 369
FLS + L+GSL+G P+ D+P L++ Y +DE +T ++IN+AF M G+
Sbjct: 298 FLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGEN 357
Query: 370 LRSVI 374
R VI
Sbjct: 358 ARGVI 362
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 273 bits (701), Expect = 2e-89
Identities = 125/371 (33%), Positives = 184/371 (49%), Gaps = 12/371 (3%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIF 67
+ AAV G P V+E+VE++ P+P+E+ +++V T +C +D+ + P +
Sbjct: 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVV-RDGGLPTPLPAVL 59
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
GHE +G+VE+VG VT G+HV+ F C C C S CE D
Sbjct: 60 GHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPD 118
Query: 128 QQTRFSI-KGKPVY-HYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
T S+ G PV+ H+ SSF+ Y VVH VKV PLE + L CG+ G GA
Sbjct: 119 GSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAV 178
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
NV GS++ +FG G VGL+ AK G + II VD + E AK G T +NP
Sbjct: 179 LNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
+ + + I+ IT GG DY+ + G +I A+ + G +G P EV
Sbjct: 239 KEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTL 295
Query: 306 HYGLFL-SGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
L SG+T++G + G P+ +P L+ Y + +F D+ +T FEDINQA
Sbjct: 296 DVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTF-YPFEDINQAIADS 354
Query: 365 KEGKCLRSVIH 375
+ GK ++ V+
Sbjct: 355 ESGKVIKPVLR 365
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Score = 259 bits (664), Expect = 5e-84
Identities = 133/364 (36%), Positives = 192/364 (52%), Gaps = 8/364 (2%)
Query: 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI--FPRIFGHEAS 72
A + +PLV+EEVE++PP P E+ +K+ LC SD++ P GHEA+
Sbjct: 11 APTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAA 70
Query: 73 GIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTR 131
G+V VG GVT+ G+HV+ VF+ C CR C + CE G + S + R
Sbjct: 71 GVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGR-R 129
Query: 132 FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADI 191
++G + H+ VS+F+EY VV VK+ PLE L C + G+GA N A +
Sbjct: 130 LRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV 189
Query: 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251
G +V + GLG VGLS GA A GAS+++ VD N +K A+ G T +N D N
Sbjct: 190 RPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPN-A 248
Query: 252 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AHYGLF 310
V+QV + +T GG DY+FE G + TA + G G VT G+P + ++ L
Sbjct: 249 VEQV-RELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLV 306
Query: 311 LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL 370
RTLKGS G P+ D+P + YL VD+ +TH L ++IN+ F+ + G+ +
Sbjct: 307 AEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAV 366
Query: 371 RSVI 374
R VI
Sbjct: 367 RQVI 370
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371 |
| >gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 3e-83
Identities = 141/370 (38%), Positives = 200/370 (54%), Gaps = 14/370 (3%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD---ITAWETQAIFPRIFGHE 70
KAAV WG GQP VEE+E++ P+ E+ +K+V + LC SD +T +P + GHE
Sbjct: 3 KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
+G+V VGPGVT G+HV+ FI C CR C + N C++ G SD
Sbjct: 63 GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTY 122
Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD 190
RF G+ V C + +FSEYTVV VK+ PL+K CL+ CG+ G G+A N+AD
Sbjct: 123 RFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIAD 182
Query: 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
+ G TVV+ G+G VG++ QGA GA ++I VD K E+A FG T E
Sbjct: 183 VRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF--ASMEE 240
Query: 251 PVQQVIKRITDG-GADYSFECIG--DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
V Q+++ +T+G GAD + +G D I AL + G G V G+ + +V
Sbjct: 241 AV-QLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMA-DVDVKV 297
Query: 308 GLF---LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
LF L + L+G+LFGG P+ D+P L+ Y + +DE IT + IN+ + M
Sbjct: 298 NLFELTLLQKELQGTLFGGANPRADIPRLLELYRAGKLKLDELITRTYTLDQINEGYQDM 357
Query: 365 KEGKCLRSVI 374
+GK +R VI
Sbjct: 358 LDGKNIRGVI 367
|
This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 223 bits (569), Expect = 8e-70
Identities = 123/371 (33%), Positives = 169/371 (45%), Gaps = 16/371 (4%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR--IFGHEA 71
KAAV G PL +EE+ V P+ EI I+V +C SD+ + + FP + GHE
Sbjct: 2 KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPFVLGHEI 61
Query: 72 SGIVESVGPGVT---EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR-GVMHSD 127
SG V VGP V + G+ V+ FI C CR C K N CE R D
Sbjct: 62 SGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYD 121
Query: 128 QQTR-FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
TR F + G PVY Y ++ +EY VV + + + +L C GA
Sbjct: 122 GTTRLFRLDGGPVYMY-SMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALK 180
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
+ AD+ G TV + G+G VG S Q AKA GAS II VD EK KAK G T +N
Sbjct: 181 HAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAA 240
Query: 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
+ I+ IT G G D E +G AL DG G AV +G+
Sbjct: 241 KEDAVAA--IREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEI 297
Query: 306 HYGLFLS-GRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
+ G + GS G +P+ DLP LV + + +TH E+IN+A+ +
Sbjct: 298 PITRLVRRGIKIIGSY--GARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENL 355
Query: 365 KEGKC-LRSVI 374
++G R+++
Sbjct: 356 RKGLIHGRAIV 366
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 2e-62
Identities = 122/370 (32%), Positives = 184/370 (49%), Gaps = 21/370 (5%)
Query: 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIFG 68
T + +A G P+ +E + V P P E+ + + +C +D+ + I FP + G
Sbjct: 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLH-YREGGINDEFPFLLG 59
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
HEA+G+VE+VG GVT+ G++V+ + C CR CK + C H+
Sbjct: 60 HEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYC--------FDTHNAT 111
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
Q G + + +F+E T+VH+G KV A LL CG+ AGLGAA N
Sbjct: 112 QKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNT 171
Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
+ +G +V + G G VG + GA GAS+II VD + K E A+ FG T +N +
Sbjct: 172 GGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG- 230
Query: 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
+PV+ I+ +T G GAD + +G A + D G V +GVP P++
Sbjct: 231 TDPVEA-IRALTGGFGADVVIDAVGRPETYKQAFYA-RDLAGTVVLVGVP--TPDMTLEL 286
Query: 308 GL---FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364
L F G LK S +G P+ D P LV+ YL+ +D F+T + +D+ +AF+ M
Sbjct: 287 PLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKM 346
Query: 365 KEGKCLRSVI 374
G LRSV+
Sbjct: 347 HAGDVLRSVV 356
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 182 bits (465), Expect = 2e-55
Identities = 80/291 (27%), Positives = 118/291 (40%), Gaps = 33/291 (11%)
Query: 39 EIRIKVVCTSLCRSDITAWE----TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTV 94
E+ ++V LC +D+ P I GHE +G+V VGPGVT G+ V+ +
Sbjct: 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60
Query: 95 FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
C TC C+ +LG G F+EY VV
Sbjct: 61 PNLGCGTCELCRELCPG-GGILGEGLDG------------------------GFAEYVVV 95
Query: 155 HSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
+ V + LE+ LL L+ A + G TV++ G G VGL AQ AK
Sbjct: 96 PADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAK 155
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
A GA R+I D + EK E AK G ++ + E +++ ++ GGAD + +G
Sbjct: 156 AAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELRLTGGGGADVVIDAVGGP 212
Query: 275 GMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
+ AL+ G V +G P + L T+ GS G +
Sbjct: 213 ETLAQALR-LLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE 262
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 181 bits (462), Expect = 5e-54
Identities = 97/361 (26%), Positives = 146/361 (40%), Gaps = 26/361 (7%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF----PRIFGH 69
KAAV + G + +EE P P ++ I+V T +C SD+ + F I GH
Sbjct: 2 KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61
Query: 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
E G V VG V F G+ V+ C CR C++ + N CE G
Sbjct: 62 EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPG------------ 108
Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
G F+EY V + + E+ L+ L+ A
Sbjct: 109 ----FYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERA 164
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
+ G TVV+ G G +GL AK GAS +I VD +PE+ E AK G + + N +
Sbjct: 165 AVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV-NPSE 223
Query: 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 308
+ I +T G GAD E +G + AL++ G G V +GV +
Sbjct: 224 DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGL 282
Query: 309 LFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK 368
+ TL+GSL + D ++ + ++ ITH L +D +A+ L + K
Sbjct: 283 VVSKELTLRGSLRPSGRE--DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRK 340
Query: 369 C 369
Sbjct: 341 E 341
|
Length = 350 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 172 bits (437), Expect = 2e-50
Identities = 105/375 (28%), Positives = 157/375 (41%), Gaps = 48/375 (12%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIF 67
+T KAAV GQPL +EEV V P P E+ IKV +C +D+ + P I
Sbjct: 2 MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIP 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTV-FIGECKTCRQCKSDKSNTCE---VLGLERRGV 123
GHE G V VG GVT G+ V + C C C+S N C + G G
Sbjct: 62 GHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDG- 120
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
++EY VV + VK+ L + L C
Sbjct: 121 -----------------------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR 157
Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
A A++ G V + G G +G Q AKA GA +I + + EK E AK G +
Sbjct: 158 AL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVI 215
Query: 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
N +D ++ ++ V + AD + +G + +L++ G G V +G+P P
Sbjct: 216 NSSD-SDALEAVKEI-----ADAIIDTVGPATLE-PSLKALRRG-GTLVLVGLPGGGPIP 267
Query: 304 AAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFN 362
L L ++ GSL G + DL ++ E + I + ++IN+A+
Sbjct: 268 LLPAFLLILKEISIVGSLVGT---RADLEEALD--FAAEGKIKPEILETIPLDEINEAYE 322
Query: 363 LMKEGKCL-RSVIHM 376
M++GK R+VI M
Sbjct: 323 RMEKGKVRGRAVIDM 337
|
Length = 339 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 3e-49
Identities = 101/366 (27%), Positives = 154/366 (42%), Gaps = 43/366 (11%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW--ETQAIFPRIFGHEA 71
KA V G G L E++ P P E+ +KV +C SDI + P + GHE
Sbjct: 2 KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEF 60
Query: 72 SGIVESVGPGVTEFNEGEHVLTVF-IGECKTCRQCKSDKSNTCE---VLGLERRGVMHSD 127
SG VE VG GV + G+ V V + C C CK + + C +G R G
Sbjct: 61 SGTVEEVGSGVDDLAVGDRV-AVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDG----- 114
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
+F+EY V + +K+ E+ ++ + L A
Sbjct: 115 -------------------AFAEYVSVPARNLIKIPDHVDYEEAAMIE-PAAVALHAVRL 154
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
A I+ G TVV+ G GT+GL Q K GA R+I VD + EK A+ G + +NP +
Sbjct: 155 -AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE 213
Query: 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK--LKPEVA 304
+ + ++ +T+G GAD E G I AL G G V +G+P +
Sbjct: 214 EDV---EKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEE 269
Query: 305 AHYGLFLSGRTLKGS--LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFN 362
A + T++GS + P + + ++ + V+ ITH L ED AF
Sbjct: 270 AFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFE 329
Query: 363 LMKEGK 368
+ + +
Sbjct: 330 RLADRE 335
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Score = 161 bits (409), Expect = 3e-46
Identities = 94/332 (28%), Positives = 136/332 (40%), Gaps = 62/332 (18%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--------------T 59
KAA G + VEEV P +P E++IKV +C SD+ + T
Sbjct: 2 KAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLT 60
Query: 60 QAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE 119
P GHE SG+V VG GVT F G+ V+ +C TC CK N C+ LG
Sbjct: 61 GETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI 120
Query: 120 RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179
G+ F+EY VV + K+ PLE
Sbjct: 121 --GLGGGG------------------GGFAEYVVVPAYHVHKLPDNVPLE---------- 150
Query: 180 AGLGA-------AWN---VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229
A AW+ + G T ++ G G +GL KA GAS+II + +
Sbjct: 151 --EAALVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEA 208
Query: 230 KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGW 288
+ E A+ G T L+P + V ++++T G G D SF+C G + TA+ +
Sbjct: 209 RRELAEELGATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR- 265
Query: 289 GLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320
G AV + + + + L L +TL GS+
Sbjct: 266 GTAVNVAIWEKPISFNPND-LVLKEKTLTGSI 296
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 159 bits (404), Expect = 2e-45
Identities = 100/376 (26%), Positives = 152/376 (40%), Gaps = 31/376 (8%)
Query: 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIFGH 69
+AAV G G+PL + EV + +P + ++V +C SD+ + P I GH
Sbjct: 1 ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60
Query: 70 EASGIVESVGPGVTEFNEGEH-------VLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
E G V ++G GVT GE +V C C +C CE R+
Sbjct: 61 EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVGDPTKCE----NRKK 115
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA-VKVSSIAPLEKICLLSCGLSAG 181
H + G ++E+ + G A V+V P E +C L+
Sbjct: 116 YGHEASCDDPHLSG----------GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATV 165
Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
L A + G TVV+ G G +GL AK GA R+I +D +PE+ E A+ FG
Sbjct: 166 LAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA 225
Query: 242 FLNPNDNNEP-VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299
++ ++ +P + +++ IT G GAD E G + L+ G G V +G
Sbjct: 226 TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAP 284
Query: 300 KPEVAAH-YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDIN 358
V + T+ G + R + F E +TH EDIN
Sbjct: 285 AGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERT-QDRFPFAELVTHRYPLEDIN 343
Query: 359 QAFNLMKEGKCLRSVI 374
+A L + G L+ VI
Sbjct: 344 EALELAESGTALKVVI 359
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 3e-45
Identities = 78/264 (29%), Positives = 116/264 (43%), Gaps = 28/264 (10%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW---ETQAIFPRIFGHE 70
+AAV G+PL + EV P P+ + ++V +CRSD W + P + GHE
Sbjct: 2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
+G+V VG V+ + G+ V F+ C TC C++ SN CE Q
Sbjct: 62 FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQ-----------VQP 110
Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
F+ G SF+EY V V++ L C + A +
Sbjct: 111 GFTHPG----------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQ 160
Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
A + G V + G G VGLS A A GA R+I VD + +K E A+ G +N ++
Sbjct: 161 ARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE- 218
Query: 249 NEPVQQVIKRITDGGADYSFECIG 272
E V ++ +T GGA S + +G
Sbjct: 219 VEDVAAAVRDLTGGGAHVSVDALG 242
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 6e-45
Identities = 104/379 (27%), Positives = 148/379 (39%), Gaps = 54/379 (14%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIFGHE 70
KAAV G + +EEV V P P E+ +KV +C +D+ PRI GHE
Sbjct: 2 KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
+G + VG GVT F G+ V C C C N C
Sbjct: 61 IAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPN--------------- 105
Query: 131 RFSIKGKPVYHY-CAVSSFSEYTVVHS-----GCAVKVSSIAPLEKICL---LSCGLSAG 181
+ G Y F+EY V + G +K+ E+ L L+C +
Sbjct: 106 -YKKFG---NLYDGG---FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI--- 155
Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
A A I G TV++ G G +GL A AKA GA ++I D N + E AK G
Sbjct: 156 --NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY 213
Query: 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300
++ + + + + ++ +TDG GAD G AL+ G + G+PK
Sbjct: 214 TIDAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS 271
Query: 301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLK----KEFMVDEFITHNLLFED 356
+ T+ GS P L+ + V + ITH ED
Sbjct: 272 TVNIDPNLIHYREITITGSYAAS-------PEDYKEALELIASGKIDVKDLITHRFPLED 324
Query: 357 INQAFNLMKEGKCLRSVIH 375
I +AF L +GK L+ VI
Sbjct: 325 IEEAFELAADGKSLKIVIT 343
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 1e-43
Identities = 106/380 (27%), Positives = 162/380 (42%), Gaps = 55/380 (14%)
Query: 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI--F----PRIFG 68
AAV G G L +EE + P P E+ ++V +C SD+ ++ I F P + G
Sbjct: 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLG 59
Query: 69 HEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
HE++G V +VG GVT G+ V + + C+TC CKS + N C
Sbjct: 60 HESAGTVVAVGSGVTHLKVGDRVAIEPGVP-CRTCEFCKSGRYNLCP------------- 105
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
RF+ P Y + K+ LE+ L+ LS G+ A
Sbjct: 106 -DMRFA--ATPPVDGT----LCRYVNHPADFCHKLPDNVSLEEGALVE-PLSVGVHAC-R 156
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP-- 245
A + G TV++FG G +GL A AKA GA++++ D +P + E AK G T +N
Sbjct: 157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
D E +++ + + G D EC G I TA+ + G G V +G+ K + +
Sbjct: 217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPL 275
Query: 306 HYGLFLSGR--TLKGSLF---GGWKPKTDLPS--LVNRYLKKEFMVDEFITHNLLFEDIN 358
S R ++G F + +L + V+ V ITH ED
Sbjct: 276 ---SAASLREIDIRGV-FRYANTYPTAIELLASGKVD--------VKPLITHRFPLEDAV 323
Query: 359 QAFNLMKEGK--CLRSVIHM 376
+AF +GK ++ VI
Sbjct: 324 EAFETAAKGKKGVIKVVIEG 343
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 3e-43
Identities = 100/366 (27%), Positives = 154/366 (42%), Gaps = 35/366 (9%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR----IFGH 69
+ AV G + + E V P P E+ ++V + LC SD+ + P I GH
Sbjct: 2 RGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGH 60
Query: 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
E +G+V +VGPGVT F G+ V+ C CR C+ C
Sbjct: 61 EPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCT--------------- 105
Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
+ Y + +EY +V + + LL CG+ A
Sbjct: 106 -----SKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA-YHALRRV 159
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
+S TV++ G G VGL A+A GA +IGVD +PE+ E AKA G +N ++
Sbjct: 160 GVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD 219
Query: 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV-PKLKPEVAAHYG 308
VQ++ + + GAD + EC G+T AL++ WG V +G +L EV+
Sbjct: 220 --VQEIRELTSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEGGELTIEVSND-- 274
Query: 309 LFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK 368
L RTL GS + D+ + + VD +TH + +A+ L +G+
Sbjct: 275 LIRKQRTLIGSWY---FSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE 331
Query: 369 CLRSVI 374
+ V
Sbjct: 332 SGKVVF 337
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 3e-41
Identities = 104/376 (27%), Positives = 149/376 (39%), Gaps = 43/376 (11%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWE---TQAIFPRIFGH 69
KA V G G+ + +EEV Q P + ++V TS+C SD+ + A I GH
Sbjct: 2 KALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGH 60
Query: 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
E G V VG V G+ V I C CR C+ CE
Sbjct: 61 EFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGW--------- 111
Query: 130 TRFSIKGKPVYHYCAVS-SFSEYTVVH--SGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
+ +EY V K+ P E +LS L G A
Sbjct: 112 ----------KLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAE 161
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
A I GSTV + G G VGL GA+ GA+RII VD+NPE+ + AK G T+ +NP
Sbjct: 162 L-AGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220
Query: 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL--KPEV 303
N + V+Q+++ +T G G D E +G + T+ + KP+
Sbjct: 221 -NGDIVEQILE-LTGGRGVDCVIEAVG----FEETFEQAVKVVRPGGTIANVGVYGKPDP 274
Query: 304 AAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFN 362
G F T K L +P L++ + + + ITH +DI +A+
Sbjct: 275 LPLLGEWFGKNLTFKTGLVPVRA---RMPELLDLIEEGKIDPSKLITHRFPLDDILKAYR 331
Query: 363 LMKEGK--CLRSVIHM 376
L C++ VI
Sbjct: 332 LFDNKPDGCIKVVIRP 347
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 3e-41
Identities = 103/369 (27%), Positives = 161/369 (43%), Gaps = 52/369 (14%)
Query: 22 GQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWE-TQAIF--PRIFGHEASGIVE 76
+P +E V++ P P E+ ++V +C SD+ + PRI GHE SG V
Sbjct: 7 EKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVV 66
Query: 77 SVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTRFS 133
VG GV G+ V+ C C C+ + N CE VLG+ R G
Sbjct: 67 EVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGF--------- 117
Query: 134 IKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISK 193
+EY VV + + + L++ L+ L+ G A A ++
Sbjct: 118 ---------------AEYIVVPADALLVPEGL-SLDQAALVEP-LAIGAHAVRR-AGVTA 159
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253
G TV++ G G +GL V Q AKARGA R+I VD + E+ E A+ G + +N D E V
Sbjct: 160 GDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVA 216
Query: 254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS 312
++ +TDG GAD + G+ + A++ G G V +G+ K P
Sbjct: 217 ARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK-GPVTFPDPEFHKK 274
Query: 313 GRTLKGS---LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMK--EG 367
T+ GS + D P +++ + + ITH FED+ +AF+L + G
Sbjct: 275 ELTILGSRNAT------REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPG 328
Query: 368 KCLRSVIHM 376
++ +I
Sbjct: 329 GVIKVLIEF 337
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 145 bits (369), Expect = 1e-40
Identities = 106/376 (28%), Positives = 158/376 (42%), Gaps = 57/376 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI--FPRIFGHEA 71
KA V G G+ L VEEV V P P+E+ IKV +C +D+ +E + P + GHE
Sbjct: 2 KALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEF 60
Query: 72 SGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
+G+V +VG VT F G+ V V C C C+ + N CE L GV +
Sbjct: 61 AGVVVAVGSKVTGFKVGDRV-AVDPNIYCGECFYCRRGRPNLCENLTA--VGVTRN---- 113
Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSAGLGAAWN 187
G F+EY VV + K+ E+ L LSC + +
Sbjct: 114 ----GG-----------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHG-----LD 153
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
+ I G +V++FG G +GL +AQ K GASR+ + N EK E AK G TE ++P+
Sbjct: 154 LLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR 213
Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH- 306
+ Q K G D E G + A++ G G + GV V+
Sbjct: 214 EDPEAQ---KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISP 269
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVN------RYLK-KEFMVDEFITHNLLFEDINQ 359
+ +F T+ GS L+ + V ++H L E++ +
Sbjct: 270 FEIFQKELTIIGSF-----------INPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPE 318
Query: 360 AFNLMKEGKCLRSVIH 375
A M+ G L+ V+
Sbjct: 319 ALEGMRSGGALKVVVV 334
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 9e-40
Identities = 113/373 (30%), Positives = 160/373 (42%), Gaps = 55/373 (14%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR-----IFG 68
KAA+ +PL +EEV P P E+ IKV +C D+ W + FPR I G
Sbjct: 2 KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFW--KGFFPRGKYPLILG 59
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMH 125
HE G VE VG GV F G+ V+ + C C C S + N C G E G
Sbjct: 60 HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDG--- 116
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
F+EY V VK+ E L +C + + A
Sbjct: 117 ---------------------GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL 155
Query: 186 WNVADISKGSTVVI-FGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
A + KG TV++ G VG+ Q AKA GA R+I V +PEK + K G ++
Sbjct: 156 -KRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVID 213
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
+ +E V+++ GGAD E +G + I +L+S G G V +G + P+ A
Sbjct: 214 GSKFSEDVKKL------GGADVVIELVG-SPTIEESLRSLNKG-GRLVLIG--NVTPDPA 263
Query: 305 -AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFN 362
GL L + GS+ K D+ + L KE + I + EDIN+A
Sbjct: 264 PLRPGLLILKEIRIIGSISA---TKADVEEALK--LVKEGKIKPVIDRVVSLEDINEALE 318
Query: 363 LMKEGKCL-RSVI 374
+K GK + R V+
Sbjct: 319 DLKSGKVVGRIVL 331
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 8e-38
Identities = 101/375 (26%), Positives = 155/375 (41%), Gaps = 59/375 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TAWETQAIFPR---IFGH 69
KA G G+ E + P + ++ + C SD+ T W A R I GH
Sbjct: 2 KAFAMLGIGKV-GWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWG-GAPGERHGMILGH 59
Query: 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV-MHSDQ 128
EA G+VE VG V +F G+ V+ I + RG S
Sbjct: 60 EAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQ--------------RGYPSQSGG 105
Query: 129 QT---RFS-IKGKPVYHYCAVSSFSEYTVVHSGCA--VKVSSIAPLEKICLLSCGLSAGL 182
+FS K F+EY V+ A + E+ +L +S G
Sbjct: 106 MLGGWKFSNFKD---------GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF 156
Query: 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
A A+I G TV +FG+G VGL GA+ RGA RII V + P + E AK +G T+
Sbjct: 157 HGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDI 215
Query: 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ--------SCCDGWGLAVT 293
++ N + V+Q I ++T G G D G AL+ S + +G
Sbjct: 216 VDYK-NGDVVEQ-ILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDY 273
Query: 294 LGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD-LPSLV-NRYLKKEFMVDEFITHN 351
L +P+ + +G+ + +T+ G L G + + + L SL+ + ++ H
Sbjct: 274 LPIPREE------WGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLL---THHF 324
Query: 352 LLFEDINQAFNLMKE 366
F+DI +A LMK+
Sbjct: 325 FGFDDIEEALMLMKD 339
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351 |
| >gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 6e-36
Identities = 102/378 (26%), Positives = 161/378 (42%), Gaps = 58/378 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIF 67
KAA + G+PL +E+V V P P ++ ++V +C SD+ + P
Sbjct: 2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
GHE +G VE VG GV EG+ V+ C TCR C+ + N CE G
Sbjct: 62 GHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCE--NARFPG----- 114
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC-GLSAGLGAAW 186
G F+EY +V S VK+ + L+ GL+A
Sbjct: 115 ----IGTDG----------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKK 160
Query: 187 NVADISKGSTVVIFGLGTVGLSVA-QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
+ + GSTVV+ G+G +G +A Q +A + +I VD + E + A+ G LN
Sbjct: 161 ALPYLDPGSTVVVIGVGGLG-HIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNA 219
Query: 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCD-------GWGLAVTLGVP 297
+D+ V + ++ +T G GAD + +G + A + G+G L
Sbjct: 220 SDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTS 276
Query: 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI 357
L P + ++ GSL+G +L +V L + V IT L ED
Sbjct: 277 DLVP----------TEISVIGSLWGTR---AELVEVVA--LAESGKVKVEITKFPL-EDA 320
Query: 358 NQAFNLMKEGKCL-RSVI 374
N+A + ++EG+ R+V+
Sbjct: 321 NEALDRLREGRVTGRAVL 338
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340 |
| >gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 132 bits (334), Expect = 2e-35
Identities = 116/382 (30%), Positives = 165/382 (43%), Gaps = 61/382 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-----TAWETQAI-FPRIF 67
KA V AG + EV V P P E+ IKV+ S+C +D+ W I P IF
Sbjct: 2 KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIF 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVL--TVFIGECKTCRQCKSDKSNTCE---VLGLERRG 122
GHE +G V VG GVT G++V T + C C QC++ + C+ +LG++ G
Sbjct: 62 GHEFAGEVVEVGEGVTRVKVGDYVSAETHIV--CGKCYQCRTGNYHVCQNTKILGVDTDG 119
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGL 182
F+EY VV K P E + S + L
Sbjct: 120 C------------------------FAEYVVVPEENLWKNDKDIPPE---IAS--IQEPL 150
Query: 183 GAAWN---VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
G A + D+S G +V+I G G +GL AKA GAS +I D NP + E AK G
Sbjct: 151 GNAVHTVLAGDVS-GKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGA 209
Query: 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299
+NP + E V +V G D E G+ I L++ G G LG+P
Sbjct: 210 DVVINPRE--EDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG 266
Query: 300 KPEVAAHYGLFLSGRTLKG----SLFGGWKPKTDLPSLVNRYLK-KEFMVDEFITHNLLF 354
++ + + G T++G +F W V+ LK + + ITH L
Sbjct: 267 PVDIDLNNLVIFKGLTVQGITGRKMFETWY-------QVSALLKSGKVDLSPVITHKLPL 319
Query: 355 EDINQAFNLMKEGKCLRSVIHM 376
ED +AF LM+ GKC + V++
Sbjct: 320 EDFEEAFELMRSGKCGKVVLYP 341
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 131 bits (333), Expect = 3e-35
Identities = 101/376 (26%), Positives = 153/376 (40%), Gaps = 64/376 (17%)
Query: 13 CKAAV--AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRI 66
KAAV +G +P V++V V P P E+ +K+ + +C +D+ A W + P I
Sbjct: 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLI 59
Query: 67 FGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
GHE +G+V +VGPGV+ G+ V + C C C++ C
Sbjct: 60 GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCP----------- 108
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV------SSIAPLEKICLLSCGLS 179
+ + + +++ G +F+EY + + + APL L
Sbjct: 109 NQKNSGYTVDG----------TFAEYAIADARYVTPIPDGLSFEQAAPL---------LC 149
Query: 180 AGLGA--AWNVADISKGSTVVIFG----LGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
AG+ A A + G VVI G LG +G+ Q AKA G R+I +D EK E
Sbjct: 150 AGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGV---QYAKAMGL-RVIAIDVGDEKLEL 205
Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVT 293
AK G F++ ++ V+ V + GGA AL G G V
Sbjct: 206 AKELGADAFVDFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVC 263
Query: 294 LGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL-KKEFMVDEFITHNL 352
+G+P + L L G T+ GSL G + + R K V
Sbjct: 264 VGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKPHIQVVP------ 317
Query: 353 LFEDINQAFNLMKEGK 368
ED+N+ F M+EGK
Sbjct: 318 -LEDLNEVFEKMEEGK 332
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Score = 128 bits (324), Expect = 1e-33
Identities = 105/420 (25%), Positives = 162/420 (38%), Gaps = 95/420 (22%)
Query: 16 AVAW-GAGQPLVVEEVEVNPP---QPEEIRIKVVCTSLCRSDI-----TAWETQAIFPRI 66
A+ W G V EV P P + ++V T++C SD+ + I
Sbjct: 3 ALVWHG---KGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKK--GDI 57
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHE G+VE VGP V G+ V+ F C C CK + C+
Sbjct: 58 LGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCD------------ 105
Query: 127 DQQTRFSIKGKPVYHY--CAVSSFS-----------EYTVV---HSGCAVKVSSIAPLEK 170
T S + +Y + + +S EY V G K+ EK
Sbjct: 106 --NTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGP-FKIPDDLSDEK 162
Query: 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230
LS L G AA A++ G TV ++G G VGL A+ AK GA R+I +D PE+
Sbjct: 163 ALFLSDILPTGYHAAEL-AEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPER 221
Query: 231 CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG----------------- 272
E A++ E +N + ++ V+ ++ +T G G D + +G
Sbjct: 222 LEMARSHLGAETINFEEVDDVVE-ALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLK 280
Query: 273 ---DTG-MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS----------GRTLKG 318
D + A+Q+ G +++ +GV YG ++ G TL+
Sbjct: 281 LETDRPDALREAIQAVRKGGTVSI-IGV----------YGGTVNKFPIGAAMNKGLTLRM 329
Query: 319 SLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM--KEGKCLRSVIHM 376
G + LP L+ E ITH L ED +A+ + KE C++ V+
Sbjct: 330 ---GQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 1e-32
Identities = 98/351 (27%), Positives = 144/351 (41%), Gaps = 40/351 (11%)
Query: 24 PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI------TAWETQAIFPRIFGHEASGIVES 77
LV+EEV V P P E+ +KV +C SD+ T+ P GHE +G V
Sbjct: 13 LLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTK--LPLTLGHEIAGTVVE 70
Query: 78 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGK 137
VG GVT F G+ V + C C C+ + N C M I G
Sbjct: 71 VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC------LNQGMPG-----LGIDG- 118
Query: 138 PVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV 197
F+EY VV + V V P + + + + A ++ G TV
Sbjct: 119 ---------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETV 169
Query: 198 VIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIK 257
++ GLG +GL+ Q AKA GA +I VD EK E AK G E LN D++ +
Sbjct: 170 LVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLDDSP--KDKKA 226
Query: 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 317
GG D F+ +G A ++ G G V +G+ + K V + R +
Sbjct: 227 AGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLSDLIARELR-II 284
Query: 318 GSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK 368
GS FGG DLP +++ K + + ++I + + +GK
Sbjct: 285 GS-FGG--TPEDLPEVLDLIAKGKL---DPQVETRPLDEIPEVLERLHKGK 329
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 5e-32
Identities = 102/369 (27%), Positives = 149/369 (40%), Gaps = 36/369 (9%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQAIFP-RIFGHEA 71
KA V G G V E P + +KV ++C SD+ + P + GHE
Sbjct: 2 KAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEF 61
Query: 72 SGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTR 131
G V VGP V G+ V++ F C C C+ +S C GL
Sbjct: 62 VGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL------------- 108
Query: 132 FSIKGKPVYHYCAVSSFSEYTVV--HSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
F G P + +EY V G +K+ E LL L G A A
Sbjct: 109 FGYAGSPNLD----GAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR-A 163
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
+ G TV + G G VGL A+ GA+R+ VD PE+ E+A A G E +N D
Sbjct: 164 QVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFED-A 221
Query: 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCD---GWGLAVTLGVPKLKPEVAA 305
EPV++V + T+G GAD E +G AL D G+ ++GV +
Sbjct: 222 EPVERV-REATEGRGADVVLEAVG----GAAALDLAFDLVRPGGVISSVGVHTAEEFPFP 276
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMK 365
+ TL+ FG ++ P L+ ++ I H + E+ +A+ L
Sbjct: 277 GLDAYNKNLTLR---FGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFD 333
Query: 366 EGKCLRSVI 374
+ K L+ V+
Sbjct: 334 KRKVLKVVL 342
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344 |
| >gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 2e-29
Identities = 101/373 (27%), Positives = 152/373 (40%), Gaps = 43/373 (11%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPP--QPEEIRIKVVCTSLCRSDITAW--ETQAIFPRIFGH 69
+A V G G + VEEV +P +P + I+VV T +C SD+ + + P GH
Sbjct: 2 RATVIHGPGD-IRVEEVP-DPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIGH 59
Query: 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
E G+VE VG VT G+ V+ F TC C++ + +C G Q
Sbjct: 60 EFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCV--HGGFWGAFVDGGQ 117
Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAVKVSSIAP-----LEKICLLSCGLSAGLG 183
+ V + G VKV L + LS + G
Sbjct: 118 GEY------------------VRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHH 159
Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
AA A + GSTVV+ G G VGL AK GA RII + + ++ A+ FG T+ +
Sbjct: 160 AA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIV 218
Query: 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
E V +V + +T G GAD EC+G + A+ G G +GVP E
Sbjct: 219 -AERGEEAVARV-RELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGGVE 275
Query: 303 VAAHYGLFLSGRTLKGSLFGGWKP-KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAF 361
+ LF L GG P + LP L++ L L +++ + +
Sbjct: 276 LDVRE-LFFRNVGLA----GGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGY 330
Query: 362 NLMKEGKCLRSVI 374
M E + ++ ++
Sbjct: 331 RAMDERRAIKVLL 343
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 4e-29
Identities = 79/359 (22%), Positives = 123/359 (34%), Gaps = 68/359 (18%)
Query: 20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI------TAWETQAIFPRIFGHEASG 73
G G+ VEE P P ++ ++V +C SD+ W P GHE G
Sbjct: 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWG 61
Query: 74 IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFS 133
V ++GPGV G D+ V GL
Sbjct: 62 RVVALGPGVRGLAVG-------------------DR-----VAGLSGGA----------- 86
Query: 134 IKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL--LSCGLSAGLGAAWNVADI 191
F+EY + + AV + S+ + L C L+ I
Sbjct: 87 --------------FAEYDLADADHAVPLPSLLDGQAFPGEPLGCALNVF-----RRGWI 127
Query: 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251
G TV + G G +GL Q A A GA R+I +D P + A+ G TE D++E
Sbjct: 128 RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEV--VTDDSEA 185
Query: 252 VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF 310
+ + ++ +T G GAD E +G + A + + G V G + P
Sbjct: 186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDGPRPVPFQTWN 244
Query: 311 LSGRTLKGSLFGGWKPKT-DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK 368
G L ++ + + V + +TH E++ AF +
Sbjct: 245 WKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRP 303
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 4e-29
Identities = 89/362 (24%), Positives = 141/362 (38%), Gaps = 46/362 (12%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ---AIFPRIFGHE 70
KAAV AG PL EEV V P P E+ IK+ +C +D+ A E + +P + GHE
Sbjct: 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60
Query: 71 ASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
G V VG GV G+ V + +G C C C+ N C+
Sbjct: 61 IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQ-----------KAVN 109
Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN-- 187
T ++ +G ++EY V + V + PL + L C AG+ ++
Sbjct: 110 TGYTTQG----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLC---AGI-TVYSAL 155
Query: 188 -VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
A G V + G+G +G Q A+A G + + +P+K E A+ G E ++
Sbjct: 156 RDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG 214
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
+ GGAD + AL G G V +G+P+ P
Sbjct: 215 AELDEQA------AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDI 267
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKE 366
+ L + +++ GS GG + K + + N+A+ M++
Sbjct: 268 FPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKP------MIETFPLDQANEAYERMEK 321
Query: 367 GK 368
G
Sbjct: 322 GD 323
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 4e-29
Identities = 100/366 (27%), Positives = 147/366 (40%), Gaps = 56/366 (15%)
Query: 21 AGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-----TAWETQAI-FPRIFGHEASGI 74
G + EV V P P E+ IKV+ TS+C +D+ W I P++ GHE +G
Sbjct: 7 PGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGE 66
Query: 75 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTR 131
V +GPGV G++V C C C+ + + C+ + G++ G
Sbjct: 67 VVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGC-------- 118
Query: 132 FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA-- 189
F+EY VV + K P E + LG A +
Sbjct: 119 ----------------FAEYAVVPAQNIWKNPKSIPPE-----YATIQEPLGNAVHTVLA 157
Query: 190 -DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
IS G +V++ G G +GL AKA GA +I D N + E AK G T +NP
Sbjct: 158 GPIS-GKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK- 215
Query: 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
E V + + +TDG G D E G + LQ+ G G LG+P K +
Sbjct: 216 -EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTN 273
Query: 308 GLFLSGRTLKG----SLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNL 363
+ G T+ G +F W + L + +D ITH F+ + F L
Sbjct: 274 KVIFKGLTIYGITGRHMFETWYTVSRLIQ------SGKLDLDPIITHKFKFDKFEKGFEL 327
Query: 364 MKEGKC 369
M+ G+
Sbjct: 328 MRSGQT 333
|
This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340 |
| >gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Score = 114 bits (289), Expect = 8e-29
Identities = 77/274 (28%), Positives = 112/274 (40%), Gaps = 40/274 (14%)
Query: 16 AVAWGAGQPLVVEEVEVNPPQ---PEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFGHE 70
G P V +V P+ P + +++ T++C SD+ + T A + GHE
Sbjct: 2 KAVV-YGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLGHE 60
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
A G VE VG V G+ V+ F C CR CK + C + R G
Sbjct: 61 AMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAG-------- 112
Query: 131 RFSIKGKPVYHYCAVSSF----SEYTVV---HSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
Y Y + + +EY V EK L LS
Sbjct: 113 -------GAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLM--LSDIFP 163
Query: 184 AAWNVADISK---GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
W+ +++ G TV +FG G VGL A A RGASR+ VD PE+ + A++ G
Sbjct: 164 TGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI 223
Query: 241 EFLNPND--NNEPVQQVIKRITDGGADYSFECIG 272
P D + +PV+Q I + GG D + +C+G
Sbjct: 224 ----PIDFSDGDPVEQ-ILGLEPGGVDRAVDCVG 252
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 1e-28
Identities = 92/370 (24%), Positives = 140/370 (37%), Gaps = 62/370 (16%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR-----IFG 68
KA + G Q +EEV P +E+ IKV LC D+ Q +PR I G
Sbjct: 2 KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQL--QGFYPRMKYPVILG 59
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMH 125
HE G VE VG V F G+ V ++ TC C+S + C+ G E G
Sbjct: 60 HEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGF-- 117
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
F+EY V VKV E ++ C +
Sbjct: 118 ----------------------FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM-VYRG 154
Query: 186 WNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VTE 241
A + KG TV++ G G VG+ Q AKA GA ++I V ++ K + + +
Sbjct: 155 LRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKYADYVIVG 213
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
+ +E V K+I GGAD E +G T + +L+S G + + + P
Sbjct: 214 ----SKFSEEV----KKI--GGADIVIETVG-TPTLEESLRSL--NMGGKIIQ-IGNVDP 259
Query: 302 EVAAHYGL---FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDIN 358
L L + G + K D+ + L E + I + +I+
Sbjct: 260 SPTYSLRLGYIILKDIEIIGHISAT---KRDVEEALK--LVAEGKIKPVIGAEVSLSEID 314
Query: 359 QAFNLMKEGK 368
+A +K+
Sbjct: 315 KALEELKDKS 324
|
Length = 334 |
| >gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 2e-27
Identities = 103/389 (26%), Positives = 153/389 (39%), Gaps = 83/389 (21%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWE------------- 58
KAA G+PL EEVE++ P+P E+ +KV +C SD+ W+
Sbjct: 2 KAAAVVEPGKPL--EEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSL 59
Query: 59 --TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVF--IGECKTCRQCKSDKSNTCE 114
P + GHE G V +VGP + G+ VL V+ IG C C C + N C
Sbjct: 60 DDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVL-VYPWIG-CGECPVCLAGDENLCA 117
Query: 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV-HSGCAVKVSSIAPLEKICL 173
+ R + ++EY +V HS V + P
Sbjct: 118 --------------KGRALGIFQDGG-------YAEYVIVPHSRYLVDPGGLDPALA-AT 155
Query: 174 LSC-GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
L+C GL+A A + + VVI G G +GL KA G + II VD + K E
Sbjct: 156 LACSGLTA-YSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLE 214
Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD-------------YSFECIGDTGMITT 279
AKA G +N +D + +++IK GG D +F+ + G +
Sbjct: 215 AAKAAGADVVVNGSDPDA-AKRIIK-AAGGGVDAVIDFVNNSATASLAFDILAKGGKLV- 271
Query: 280 ALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLK 339
+G TL +P L L T++GS G + +L +L K
Sbjct: 272 ----LVGLFGGEATLPLP----------LLPLRALTIQGSYVGSLEELRELVALA----K 313
Query: 340 KEFMVDEFITHNLLFEDINQAFNLMKEGK 368
+ +T L D+N A + +K GK
Sbjct: 314 AGKLKPIPLTERPL-SDVNDALDDLKAGK 341
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350 |
| >gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-27
Identities = 77/274 (28%), Positives = 112/274 (40%), Gaps = 46/274 (16%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIR-----IKVVCTSLCRSD--ITAWETQAIFP-R 65
KA V G G+ + E+ P+P +K++ T++C +D I + + P R
Sbjct: 2 KALVYHGPGK-ISWEDR----PKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGR 56
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE----VLGLERR 121
I GHE G+VE VG VT F G+ VL I C TC C+ + CE +LG
Sbjct: 57 ILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLID 116
Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT-VVHSGCA-VKVSSIAPLEKICLLSCGLS 179
G +EY + H+ + K+ E +LS L
Sbjct: 117 GTQ------------------------AEYVRIPHADNSLYKLPEGVDEEAAVMLSDILP 152
Query: 180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
G + G TV I G G VGL+ A+ S+II VD + + E AK G
Sbjct: 153 TGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGA 212
Query: 240 TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
T +N + + + +TDG G D E +G
Sbjct: 213 THTVNSAKGD--AIEQVLELTDGRGVDVVIEAVG 244
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 6e-27
Identities = 92/373 (24%), Positives = 146/373 (39%), Gaps = 49/373 (13%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGI 74
L VE+V V +P+EI I+V +C SDI +ET FP + GHE SG+
Sbjct: 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98
Query: 75 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSI 134
VE G V F +G+ V + C CR C+S N C+ L FS
Sbjct: 99 VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE-----------LGFSA 147
Query: 135 KGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL--EKICLLSCGLSAGLGAAWNV---- 188
G +F+EY V++ A +++ + + E + L A+N
Sbjct: 148 DG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIR 197
Query: 189 -ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
G+ VV++G G +GL+ AKA GAS++I + + E+ AK G NP
Sbjct: 198 GGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTK 257
Query: 248 --NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
+ ++V++ +T G GAD E G ++ + + + V
Sbjct: 258 MRDCLSGEKVME-VTKGWGADIQVEAAGAPPATIPQMEKSI--AINGKIVYIGRAATTVP 314
Query: 305 AHYGLFLSGRTLKGSLFG--GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFN 362
H + R + G G PS++ + + + IT E I +A
Sbjct: 315 LHLEVLQVRR---AQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIK 371
Query: 363 LMKEGKCLRSVIH 375
E + I
Sbjct: 372 AASERTDGKITIL 384
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 7e-27
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-G 263
VGL+ Q AKA GA+R+I VD + EK E AK G +N D E + ++ +T G G
Sbjct: 2 VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRD--EDFVERVRELTGGRG 59
Query: 264 ADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323
D +C+G + AL+ G V +G+P P L L T+ GSL GG
Sbjct: 60 VDVVIDCVGAPATLEQALE-LLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGG 118
Query: 324 -WKPKTDLPSLVN 335
+ + L L +
Sbjct: 119 REEFEEALELLAS 131
|
Length = 131 |
| >gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 6e-26
Identities = 68/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 14 KAAVAWGAG----QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRI 66
KA V G PL + EV V P P E+ IKV +CR+D+ E P I
Sbjct: 2 KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLI 61
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMH 125
GHE G VE+VGPGVT F+ G+ V ++G C CR C+S + N C
Sbjct: 62 PGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLC-----------D 110
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA- 184
+ + T +++ G ++EY V A + E+ L C AG+
Sbjct: 111 NARFTGYTVDG----------GYAEYMVADERFAYPIPEDYDDEEAAPLLC---AGIIGY 157
Query: 185 -AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
A +A + G + ++G G Q A+ +GA + + E E A+ G
Sbjct: 158 RALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELG 211
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329 |
| >gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 7e-26
Identities = 94/388 (24%), Positives = 149/388 (38%), Gaps = 88/388 (22%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-----TAWETQAI-FPRIF 67
KA V A L + +V V P P ++ IKV T++C +D+ W + I P +
Sbjct: 2 KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVV 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKSDKSNTCE---VLGLER 120
GHE G V VG VT F G+ V GE C CR C++ + + C +G+ R
Sbjct: 62 GHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNR 117
Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180
G +F+EY V+ + K+ P +
Sbjct: 118 PG------------------------AFAEYLVIPAFNVWKIPDDIPDD----------- 142
Query: 181 GLGA-------------AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227
L A ++++ G V+I G G +G+ A AK GA ++ D N
Sbjct: 143 -LAAIFDPFGNAVHTALSFDLV----GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVN 197
Query: 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCD 286
+ E A+ G T +N E ++ V+ + G D E G L +
Sbjct: 198 EYRLELARKMGATRAVNVAK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNH 255
Query: 287 GWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKG----SLFGGWKPKTDLPSLVNRYLKKE 341
G +A+ LG+P ++A + G T+KG +F W + L L+
Sbjct: 256 GGRIAM-LGIP--PGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSAL-------LQSG 305
Query: 342 FMVDEFITHNLLFEDINQAFNLMKEGKC 369
+ ITH +D + F M+ G+
Sbjct: 306 LDLSPIITHRFPIDDFQKGFEAMRSGQS 333
|
Length = 341 |
| >gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 1e-25
Identities = 77/282 (27%), Positives = 109/282 (38%), Gaps = 54/282 (19%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF---------- 63
+A V G +EEV V P P EI +KV +C DI + F
Sbjct: 2 RAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60
Query: 64 --PRIFGHEASGIVESVGPGVTE--FNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VL 116
P I GHE G V +G G E G+ V++ I C CR C + C+ +
Sbjct: 61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY 120
Query: 117 GLERR--GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL- 173
G + G M F + +VH KV P E L
Sbjct: 121 GFQNNVNGGM------------------AEYMRFPKEAIVH-----KVPDDIPPEDAILI 157
Query: 174 --LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC 231
L+C L A + A+I VV+ G G +GL + A+ + ++I +D E+
Sbjct: 158 EPLACALHAV-----DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERL 212
Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
A+ FG LNP + + V + IK +T G G D E G
Sbjct: 213 ALARKFGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATG 252
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350 |
| >gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 2e-24
Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 50/238 (21%)
Query: 37 PEEIRIKVVCTSLCRSDITAWETQAIFPRIF-----------GHEASGIVESVGPGVTEF 85
+++ +KV + LC SDI PRIF GHE SG VE+VG GV +
Sbjct: 25 QDDVLVKVASSGLCGSDI---------PRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDL 75
Query: 86 NEGEHVLTVFIGECKTCRQCKSDKSNTC---EVLGLERRGVMHSDQQTRFSIKGKPVYHY 142
+ G+ V V + C TC +C + C + +G R G
Sbjct: 76 HPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDG-------------------- 115
Query: 143 CAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL 202
+EY VV + + P+E + ++ GL A+++A +G V+I G
Sbjct: 116 ----GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGL-HAFHLAQGCEGKNVIIIGA 169
Query: 203 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP-VQQVIKRI 259
GT+GL Q A A GA + +D N EK AK+ G + N + + P +Q V++ +
Sbjct: 170 GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227
|
Length = 347 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 4e-24
Identities = 90/372 (24%), Positives = 137/372 (36%), Gaps = 86/372 (23%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWETQAI----FPRIF 67
KA V G P V++ VEV P+P E+ ++V + D+ + A P I
Sbjct: 2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
G EA+G+V +VG GVT F G+ V L
Sbjct: 62 GSEAAGVVVAVGSGVTGFKVGD------------------------RVAAL--------- 88
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC-GLSAGLGAAW 186
++EY VV + V + E+ L GL+A L
Sbjct: 89 ------------GGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFD 136
Query: 187 NVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
A + G TV++ G G VG + Q AKA GA ++ V ++ EK E K G +N
Sbjct: 137 -RAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194
Query: 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
+ E + ++ +T G G D + +G +L + G G V++G P V
Sbjct: 195 RE--EDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPG-GRLVSIGALSGGPPVP 250
Query: 305 AH-YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNL 363
+ L TL+G G P+ E + + F+L
Sbjct: 251 LNLLPLLGKRLTLRGVTLGSRDPEALA------------------------EALAELFDL 286
Query: 364 MKEGKCLRSVIH 375
+ GK L+ VI
Sbjct: 287 LASGK-LKPVID 297
|
Length = 326 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 5e-24
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 31/262 (11%)
Query: 27 VEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT 83
+ EV P P E+ IKV +C SD+ ++ P + GHE SG + VGP V
Sbjct: 16 LREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVE 75
Query: 84 EFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHY 142
+ G+ V++ C C C+ N C R+G+
Sbjct: 76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCP----HRKGI-----------------GT 114
Query: 143 CAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL 202
A F+EY +V ++ LE L L+ + A + I G TVV+FG
Sbjct: 115 QADGGFAEYVLVPEESLHELPENLSLEAAALTE-PLAVAVHAVAERSGIRPGDTVVVFGP 173
Query: 203 GTVGLSVAQGAKARGASRII-GVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261
G +GL AQ AK +GA+ ++ G + + + + AK G N E + +++ ITD
Sbjct: 174 GPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA---VNGGEEDLAELVNEITD 230
Query: 262 G-GADYSFECIGDTGMITTALQ 282
G GAD EC G + AL+
Sbjct: 231 GDGADVVIECSGAVPALEQALE 252
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 100 bits (252), Expect = 6e-24
Identities = 71/282 (25%), Positives = 108/282 (38%), Gaps = 62/282 (21%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIF 67
KA V G G P L ++ P P+E+ ++V +L D+ P I
Sbjct: 2 KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHIL 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVM 124
G + +G+VE+VGPGVT G+ V+ C C C + + N C +LG G
Sbjct: 62 GSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGY 121
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS----- 179
+EY V A + I LS
Sbjct: 122 ------------------------AEYVAVP---ARNLLPIPD---------NLSFEEAA 145
Query: 180 -AGL--GAAWNV----ADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKC 231
A L AW++ A + G TV++ G G+ VG + Q AK GA +I + +K
Sbjct: 146 AAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKL 204
Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
E+AK G ++ E + ++ +T G D E +G
Sbjct: 205 ERAKELGADYVIDY--RKEDFVREVRELTGKRGVDVVVEHVG 244
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 7e-24
Identities = 89/379 (23%), Positives = 134/379 (35%), Gaps = 75/379 (19%)
Query: 21 AGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA---WETQAIFPRIFGHEASGIVE 76
A L E P P+++ IK+ +C SD+ T W +P + GHE GIV
Sbjct: 8 ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHEIVGIVV 66
Query: 77 SVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIK 135
+VG VT+F G+ V + + C TC QCKS + C + +
Sbjct: 67 AVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCP--------------KGVVTYN 112
Query: 136 GKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-------AWNV 188
GK ++++ VV K+ L C G V
Sbjct: 113 GKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA-----GITVYSPLKRNGV 167
Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
G V + G+G +G + AKA GA + +P K E A G EF+ D
Sbjct: 168 G---PGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDP 223
Query: 249 NEPVQQVIKRITDGGADYSFECIGDTGMIT---TALQSCCDGWGLAVTLGVPKLKPEVAA 305
A S + I DT + S G V +G P +P
Sbjct: 224 EAM----------KKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAP-EEPLPVP 272
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEF--MVDEFITHNL-------LFED 356
+ L +++ GSL GG +KE M+D H + +
Sbjct: 273 PFPLIFGRKSVAGSLIGG---------------RKETQEMLDFAAEHGIKPWVEVIPMDG 317
Query: 357 INQAFNLMKEGKCL-RSVI 374
IN+A +++G R V+
Sbjct: 318 INEALERLEKGDVRYRFVL 336
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 8e-23
Identities = 83/325 (25%), Positives = 117/325 (36%), Gaps = 82/325 (25%)
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
P G+ + G V VG GVT F G+ V
Sbjct: 21 PLPPGYSSVGRVVEVGSGVTGFKPGDRVF------------------------------C 50
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
H +E VV + V + P E+ L + +A L
Sbjct: 51 FGP--------------H-------AERVVVPANLLVPLPDGLPPERAALTALAATA-LN 88
Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
+ A+ G V + GLG VGL AQ AKA GA ++GVD + + E A+A G
Sbjct: 89 GVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPA--- 144
Query: 244 NPNDNNEPVQQ-VIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
+PV I GAD E G + TAL+ D G V +G LKP
Sbjct: 145 ------DPVAADTADEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLKPL 197
Query: 303 V---AAHYG---LFLS-----GRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHN 351
+ H+ + S GR + W +L L E ++ ITH
Sbjct: 198 LLGEEFHFKRLPIRSSQVYGIGRYDRP---RRWTEARNL-EEALDLL-AEGRLEALITHR 252
Query: 352 LLFEDINQAFNLMKEGK--CLRSVI 374
+ FED +A+ L+ E CL+ V+
Sbjct: 253 VPFEDAPEAYRLLFEDPPECLKVVL 277
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 9e-21
Identities = 74/265 (27%), Positives = 103/265 (38%), Gaps = 32/265 (12%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIFGHEASGIVESV 78
L VEE P P E+R++V +C SD+ ++ P + GHE SG+VE+V
Sbjct: 9 LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAV 68
Query: 79 GPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGK 137
GPGVT G+ V V C TC C++ + N C RF G
Sbjct: 69 GPGVTGLAPGQRV-AVNPSRPCGTCDYCRAGRPNLCL--------------NMRF--LGS 111
Query: 138 PVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV 197
+ F EY VV + V + L L+ L+ L A N A G V
Sbjct: 112 AMRFPHVQGGFREYLVVDASQCVPLPDGLSLR-RAALAEPLAVALHAV-NRAGDLAGKRV 169
Query: 198 VIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP-NDNNEPVQQVI 256
++ G G +G V A+ GA+ I+ D A+A G E +N D
Sbjct: 170 LVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADK 229
Query: 257 KRITDGGADYSFECIGDTGMITTAL 281
D FE G + +AL
Sbjct: 230 GDF-----DVVFEASGAPAALASAL 249
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 2e-20
Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 30/132 (22%)
Query: 37 PEEIRIKVVCTSLCRSDI---TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
P E+ ++V +C SD+ P I GHE +GIVE VGPGVT G+ V+
Sbjct: 1 PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60
Query: 94 VFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
+ C C C+ + N C LG+ G F+E
Sbjct: 61 YPLIPCGKCAACREGRENLCPNGKFLGVHLDG------------------------GFAE 96
Query: 151 YTVVHSGCAVKV 162
Y VV + V +
Sbjct: 97 YVVVPARNLVPL 108
|
This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108 |
| >gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 87.3 bits (216), Expect = 3e-19
Identities = 97/375 (25%), Positives = 151/375 (40%), Gaps = 48/375 (12%)
Query: 20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW----ETQAIFPRIFGHEASGIV 75
G+P+V VE+ ++ +KV +C +D++ + T P GHE SG V
Sbjct: 6 EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65
Query: 76 ESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIK 135
G G + G+ V+ + C C CK+ + C R M + ++
Sbjct: 66 IQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTIC------RAQKMPGN-----DMQ 113
Query: 136 GKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA----PLEKICLLSCGLSAGLGAAWNVA 189
G F+ + VV + C V + +A PLE + +++ ++ AA A
Sbjct: 114 G----------GFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ-A 162
Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND-N 248
+ KG V++ G G VG + Q AKA GA+ ++ +D +PEK E K FG LNP D +
Sbjct: 163 GLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKS 221
Query: 249 NEPVQQVIKRITDGGADYS-----FECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
V+++IK S FEC G +AL G L V +G K E
Sbjct: 222 AREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVV-VGYTMAKTEY 280
Query: 304 AAHYGLFLSGRTLKGSLFGGWKPKTDL-PSLVNRYLKKEFMVDEFITHNLLFEDINQAFN 362
+ R L G W D P+ ++ L + + F+ L + I F
Sbjct: 281 RLSNLMAFHARAL-----GNWGCPPDRYPAALDLVLDGKIQLGPFVERRPL-DQIEHVFA 334
Query: 363 LMKEGKCLRSVIHMP 377
K R I P
Sbjct: 335 AAHHHKLKRRAILTP 349
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 86.7 bits (216), Expect = 3e-19
Identities = 70/262 (26%), Positives = 104/262 (39%), Gaps = 70/262 (26%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPRIFGHEASGIVESV 78
L E+V V P P E+ ++ + RS + P + G E +G+VE+V
Sbjct: 14 LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLP----LPFVLGVEGAGVVEAV 69
Query: 79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKP 138
GPGVT F G+ V
Sbjct: 70 GPGVTGFKVGDRV----------------------------------------------- 82
Query: 139 VYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAG--LGAAWNVADISKGS 195
Y +++EY VV + VK+ I+ LL GL+A L + V G
Sbjct: 83 AYAG-PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVK---PGD 138
Query: 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQ 254
TV++ G VGL + Q AKA GA +IG ++ EK E A+A G +N D + +
Sbjct: 139 TVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDEDFVER- 196
Query: 255 VIKRITDG-GADYSFECIG-DT 274
++ IT G G D ++ +G DT
Sbjct: 197 -VREITGGRGVDVVYDGVGKDT 217
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 5e-19
Identities = 76/326 (23%), Positives = 127/326 (38%), Gaps = 59/326 (18%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIFGHE 70
KA G PL + E +V P P E+ IKV +C SD E +PR+ GHE
Sbjct: 2 KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61
Query: 71 ASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHS 126
G +++VG GV+ + G+ V + G C TC C+ CE V G+ R G
Sbjct: 62 VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDG---- 117
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV------SSIAPLEKICLLSCGLSA 180
++EY + + ++ + APL L A
Sbjct: 118 --------------------GYAEYMLAPAEALARIPDDLDAAEAAPL---------LCA 148
Query: 181 GLGAAWNV---ADISKGSTVVIFGLGTVG-LSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
G+ +N + G V + G+G +G L+V Q A G R + + +K + A+
Sbjct: 149 GV-TTFNALRNSGAKPGDLVAVQGIGGLGHLAV-QYAAKMGF-RTVAISRGSDKADLARK 205
Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
G +++ + E V + ++ + GGA + I+ + G + LG
Sbjct: 206 LGAHHYIDTSK--EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGA 260
Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFG 322
V+ L + +++ G G
Sbjct: 261 AGEPVAVSP-LQLIMGRKSIHGWPSG 285
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 9e-19
Identities = 70/301 (23%), Positives = 110/301 (36%), Gaps = 53/301 (17%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF---------- 63
+AAV PLVV +V P P ++ +KV+ +C SD+ A
Sbjct: 2 RAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLM 59
Query: 64 ----PRIFGHEASGIVESVGPGV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL 118
+ GHE G V GPG + G V ++ + C C S
Sbjct: 60 DLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPE------ 113
Query: 119 ERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGL 178
A ++EY ++ ++V +E L L
Sbjct: 114 -------------------------APGGYAEYMLLSEALLLRVPDGLSMEDAALTE-PL 147
Query: 179 SAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
+ GL A A ++ G ++ G G +GL+V KARG I+ D +PE+ A A G
Sbjct: 148 AVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMG 206
Query: 239 VTEFLNPNDNNEP--VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
++P ++ + R FEC+G G+I ++ G G V +GV
Sbjct: 207 ADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV 265
Query: 297 P 297
Sbjct: 266 C 266
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 9e-19
Identities = 69/284 (24%), Positives = 99/284 (34%), Gaps = 91/284 (32%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPE----EIRIKVVCTSLCRSDIT------AWETQAIF 63
KA G P V+E +V P PE E+ +KV + D+
Sbjct: 2 KAVRIHEYGGPEVLELADV--PTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTL 59
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
P I GH+ +G+V +VGPGVT F G+ EV G+
Sbjct: 60 PLIPGHDVAGVVVAVGPGVTGFKVGD------------------------EVFGM----- 90
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS---- 179
T F+ G +++EY VV +A LS
Sbjct: 91 ------TPFTRGG----------AYAEYVVVP------ADELALKPA------NLSFEEA 122
Query: 180 -----AGLGAAWN----VADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPE 229
AGL AW + + G TV+I G G VG Q AKARGA R+I +
Sbjct: 123 AALPLAGL-TAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIAT-ASAA 179
Query: 230 KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273
+ ++ G E ++ + GG D + +G
Sbjct: 180 NADFLRSLGADEVIDYTK-----GDFERAAAPGGVDAVLDTVGG 218
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 85.7 bits (213), Expect = 1e-18
Identities = 88/359 (24%), Positives = 145/359 (40%), Gaps = 61/359 (16%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIFGHEASGIVESVGP 80
L + E V P P E+ ++V SL D+ + P I + +G V +VG
Sbjct: 15 LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGE 74
Query: 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVY 140
GVT F G+ V+ F D+++ LG GV+
Sbjct: 75 GVTRFKVGDRVVPTFFPNWLDGPPTAEDEASA---LGGPIDGVL---------------- 115
Query: 141 HYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN----VADISKGST 196
+EY V+ V+ E+ L C AGL AWN + + G T
Sbjct: 116 --------AEYVVLPEEGLVRAPDHLSFEEAATLPC---AGL-TAWNALFGLGPLKPGDT 163
Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256
V++ G G V L Q AKA GA R+I ++ EK E+AKA G +N + ++V
Sbjct: 164 VLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPDWGEEV- 221
Query: 257 KRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGV---PKLKPEVAAHYGLFLS 312
++T G G D+ E +G G + ++++ G G+ +G + + L
Sbjct: 222 LKLTGGRGVDHVVE-VGGPGTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLP---LLTK 276
Query: 313 GRTLKGSLFGGWKPKTDLPSLVNRYLKKEFM---VDEFITHNLLFEDINQAFNLMKEGK 368
G TL+G G + ++ NR ++ + +D FE+ +A+ ++ G
Sbjct: 277 GATLRGIAVG---SRAQFEAM-NRAIEAHRIRPVIDRVFP----FEEAKEAYRYLESGS 327
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 84.5 bits (209), Expect = 1e-18
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 32/240 (13%)
Query: 66 IFGHEASGIVESVGPGVTEFNEGEH-------VLTVFIGECKTCRQCKSDKSNTCEVLGL 118
+ GHE G V ++ G T ++G V +V + C C +C+ C+ L
Sbjct: 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVP-CGRCFRCRRGLPQKCDSL-- 57
Query: 119 ERRGVMHSDQQTRFSIKGKPVYHYCAVS-SFSEYTVVHSGCA-VKVSSIAPLEKICLLSC 176
R H + + +S ++E+ + +G A V V P C
Sbjct: 58 --RKYGH-----------EALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGC 104
Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
+ + A D+ KG V++ G G +GL+ A A A GA+R++ D +P++ E A +
Sbjct: 105 ATATVMAALEAAGDL-KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALS 163
Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295
FG T P E + + + +G G D + E G T + L+S G G AV G
Sbjct: 164 FGATALAEP----EVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280 |
| >gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 1e-17
Identities = 75/268 (27%), Positives = 109/268 (40%), Gaps = 53/268 (19%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF----PRIFGH 69
KAAV VV E + P + E +K+ +C +D+ F RI GH
Sbjct: 2 KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHV--ANGDFGDKTGRILGH 59
Query: 70 EASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
E GIV+ VGPGVT G+ V + F C C C + + C R V ++
Sbjct: 60 EGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC-------RSVKNAG- 111
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV---------SSIAPLEKICLLSCGLS 179
+++ G +E +V + AVKV SSI +C
Sbjct: 112 ---YTVDG----------GMAEQCIVTADYAVKVPEGLDPAQASSI---------TC--- 146
Query: 180 AGLGA--AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
AG+ A V+ I G + I+G G +G Q AK +++I VD N +K AK
Sbjct: 147 AGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEV 206
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGAD 265
G +N E V ++I+ GGA
Sbjct: 207 GADLTINSKR-VEDVAKIIQ-EKTGGAH 232
|
Length = 338 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 82.2 bits (204), Expect = 2e-17
Identities = 85/383 (22%), Positives = 130/383 (33%), Gaps = 83/383 (21%)
Query: 14 KAAVAWGA-GQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFPRIFGHE 70
KAAV G G LVV +V V P P+E+ +KV +L D + +P I G +
Sbjct: 2 KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCD 61
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
+G V VG GVT F G+ V V G +
Sbjct: 62 FAGTVVEVGSGVTRFKVGDRVAGF--------------------VHGGNPNDPRN----- 96
Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA---------G 181
+F EY V + K+ E+ L GL G
Sbjct: 97 ---------------GAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLG 141
Query: 182 LGAAW-NVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKC-----EKA 234
L + SKG V+I+G + VG Q AK G ++I +
Sbjct: 142 LPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITT------ASPKNFDLV 194
Query: 235 KAFGVTEFLNPNDNNEP-VQQVIKRITDGGADYSFECIGDTG---MITTALQSCCDGWGL 290
K+ G D ++P V + I+ T G Y+ +CI + AL G L
Sbjct: 195 KSLGADAVF---DYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGG-KL 250
Query: 291 AVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITH 350
L VP+ L ++FG + + +YL + + H
Sbjct: 251 VSLLPVPEETEPRKG----VKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH 306
Query: 351 NLL-----FEDINQAFNLMKEGK 368
+ E + + +L+++GK
Sbjct: 307 PVRVVEGGLEGVQEGLDLLRKGK 329
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 2e-17
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 37/242 (15%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPG 81
L +EE + P E+R+KV +C SD + A +PR+ GHE G++++VG G
Sbjct: 12 LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 71
Query: 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTRFSIKGKP 138
V GE V + C C C K N C VLG+ R G
Sbjct: 72 VDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDG---------------- 115
Query: 139 VYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV 197
FSEY VV + A ++ +IA + + ++A + ++
Sbjct: 116 --------GFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGP---TEQDVA 164
Query: 198 VIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256
+I+G G VGL++ Q K +I D E+ AK G + N+ EP+ + +
Sbjct: 165 LIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVI--NNAQEPLGEAL 222
Query: 257 KR 258
+
Sbjct: 223 EE 224
|
Length = 339 |
| >gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 1e-16
Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 32/276 (11%)
Query: 18 AWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF------PRIFGHE 70
AW G L ++ ++ P P ++R+++ +C SD+ +T P + GHE
Sbjct: 21 AWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE 80
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
+GI+E VG V G+ V C C CK + N C
Sbjct: 81 CAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCP---------------- 124
Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD 190
P H S + V + K+ LE+ + LS G+ A A+
Sbjct: 125 EMKFFATPPVH----GSLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGVHAC-RRAN 178
Query: 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
I + V++ G G +GL A+A GA RI+ VD + E+ AK G E + + N E
Sbjct: 179 IGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIE 238
Query: 251 PVQQVIKRITD---GGADYSFECIGDTGMITTALQS 283
V+ ++ I GG D SF+C+G ++TAL++
Sbjct: 239 DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEA 274
|
Length = 364 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 78.4 bits (194), Expect = 3e-16
Identities = 62/257 (24%), Positives = 95/257 (36%), Gaps = 58/257 (22%)
Query: 25 LVVEEVEVNPPQPEEIRIKVV------CTSLCRSDITAWETQAIFPRIFGHEASGIVESV 78
L +EE+ V P E+ I+V ++ R P G+EA+G+VE+V
Sbjct: 15 LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIE--PPPLPARLGYEAAGVVEAV 72
Query: 79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKP 138
G GVT F G+ V + Q
Sbjct: 73 GAGVTGFAVGDRVSVI----------------------------PAADLGQ--------- 95
Query: 139 VYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV 197
Y A EY +V + VK+ ++ +E L L+A A + G +V
Sbjct: 96 -YGTYA-----EYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVEL-AGLRPGDSV 148
Query: 198 VIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256
+I +VGL+ Q A A GA +I EK + A G + ++ E + +
Sbjct: 149 LITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEV 205
Query: 257 KRITDG-GADYSFECIG 272
RIT G G D F+ +G
Sbjct: 206 LRITGGKGVDVVFDPVG 222
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 74.8 bits (185), Expect = 5e-15
Identities = 70/275 (25%), Positives = 107/275 (38%), Gaps = 75/275 (27%)
Query: 14 KAAV--AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI--TAWETQAIFPRIF-- 67
KA V G + LV+EEV P P E+RI+V + D+ + Q P F
Sbjct: 2 KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVP 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
G E +G+VE+VG GVT F G+ V+ L +G
Sbjct: 62 GSEVAGVVEAVGEGVTGFKVGDRVV------------------------ALTGQG----- 92
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
F+E VV + + E+ +A L +
Sbjct: 93 -------------------GFAEEVVVPAAAVFPLPDGLSFEE--------AAALPVTYG 125
Query: 188 V--------ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
A + G TV++ G G VGL+ Q AKA GA R+I ++ EK A+A G
Sbjct: 126 TAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALG 184
Query: 239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
++ D +++ +K +T G G D ++ +G
Sbjct: 185 ADHVIDYRD--PDLRERVKALTGGRGVDVVYDPVG 217
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 5e-15
Identities = 71/266 (26%), Positives = 106/266 (39%), Gaps = 61/266 (22%)
Query: 18 AW-----GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAI-FPRIFGH 69
AW GA L +EE+E+ P E+ +KV L D + AW A +P + G
Sbjct: 3 AWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGV 62
Query: 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
+ +G+V +VG VT + G+ R H+
Sbjct: 63 DGAGVVVAVGAKVTGWKVGD-------------------------------RVAYHAS-- 89
Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNV 188
+ G SF+EYTVV + + + S++ E L GL+A A +
Sbjct: 90 --LARGG----------SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTA-YQALFKK 136
Query: 189 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
I G T++I G G VG Q AK G R+I + E K+ G ++ ND
Sbjct: 137 LRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGADHVIDYND 194
Query: 248 NNEPVQQVIKRITDG-GADYSFECIG 272
+ V + IK IT G G D + +G
Sbjct: 195 ED--VCERIKEITGGRGVDAVLDTVG 218
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 4e-14
Identities = 87/378 (23%), Positives = 128/378 (33%), Gaps = 89/378 (23%)
Query: 16 AVAWGAGQPLVVEEVEVNPPQPE----EIRIKVVCTSLCRSDI------TAWETQAIFPR 65
V G P V+ +EV P P E+ +KV S+ D FP
Sbjct: 1 VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I G + +G V +VG GVT F G+ V L + G
Sbjct: 61 IPGMDFAGEVVAVGSGVTRFKVGDEVFG---------------------RLPPKGGG--- 96
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
+ +EY V SG A K ++ E L GL+A L A
Sbjct: 97 ---------------------ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTA-LQA 134
Query: 185 AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
+ + G V+I G G VG Q AKA GA + GV + E ++ G E +
Sbjct: 135 LRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVC-STRNAELVRSLGADEVI 192
Query: 244 NPNDNNEPVQQVIKRITDGGA-DYSFECIGDTGMITTALQSCCDGW---GLAVTLGVP-- 297
+ + + G D F+ +G++ +L G V++G
Sbjct: 193 DYTTED-----FVALTAGGEKYDVIFDAVGNS---PFSLYRASLALKPGGRYVSVGGGPS 244
Query: 298 -KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDE-----FITHN 351
L + L GR LK F DL L + +V+E I
Sbjct: 245 GLLLVLLLLPLTLGGGGRRLK--FFLAKPNAEDL-----EQLAE--LVEEGKLKPVIDSV 295
Query: 352 LLFEDINQAFNLMKEGKC 369
ED +A+ +K G+
Sbjct: 296 YPLEDAPEAYRRLKSGRA 313
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 70/260 (26%), Positives = 99/260 (38%), Gaps = 53/260 (20%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSD---ITAWETQAIFPRIFGHEASGIVESVGPG 81
L VE+V+ P P E+ I+V + D I A + + + P I G E +G+VE VG
Sbjct: 14 LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPGAEFAGVVEEVGDH 72
Query: 82 VTEFNEGEHVLT---VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKP 138
V +G+ V+ VF G TC C S C G +
Sbjct: 73 VKGVKKGDRVVVYNRVFDG---TCDMCLSGNEMLCRNGG-------------IIGVVSNG 116
Query: 139 VYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-----AWNVADISK 193
Y +EY VV K+ E S + A A A +
Sbjct: 117 GY--------AEYIVVPEKNLFKIPDSISDE------LAASLPVAALTAYHALKTAGLGP 162
Query: 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252
G TVV+FG G G+ Q AK GA +I V + K FG E ++ + V
Sbjct: 163 GETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSRK----DWLKEFGADEVVDY----DEV 213
Query: 253 QQVIKRITDGGADYSFECIG 272
++ +K IT AD +G
Sbjct: 214 EEKVKEIT-KMADVVINSLG 232
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 6e-13
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 15/236 (6%)
Query: 42 IKVVCTSLCRSD--ITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99
+KVV T++C SD + T A + GHE +G V G V G+ V F C
Sbjct: 38 LKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIAC 97
Query: 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159
CR CK + C + R G + + G+ Y + F+ A
Sbjct: 98 GRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA 157
Query: 160 VKVSSIAPLEKI---CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKAR 216
LEKI +LS G A A + GSTV I G G VGL+ A A+
Sbjct: 158 --------LEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLL 208
Query: 217 GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272
GA+ +I D NP + +A++FG E ++ + + +Q+ + + + D + +C+G
Sbjct: 209 GAAVVIVGDLNPARLAQARSFGC-ETVDLSKDATLPEQIEQILGEPEVDCAVDCVG 263
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 67.9 bits (167), Expect = 1e-12
Identities = 72/282 (25%), Positives = 103/282 (36%), Gaps = 89/282 (31%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQP--EEIRIKVVCTSLCRSDITAWETQAIFP------R 65
KA V G P V+E EV P P E+ I+V + R+D+ Q ++P
Sbjct: 2 KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQR--QGLYPPPPGASD 59
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I G E +G+V +VGPGVT + G+ V L
Sbjct: 60 ILGLEVAGVVVAVGPGVTGWKVGD------------------------RVCAL------- 88
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS----AG 181
A ++EY VV +G + V GLS A
Sbjct: 89 -----------------LAGGGYAEYVVVPAGQLLPVPE------------GLSLVEAAA 119
Query: 182 LGAAW--------NVADISKGSTVVIFGLGT--VGLSVAQGAKARGASRIIGVDTNPEKC 231
L + + + G TV+I G G VG + Q AKA GA R+I + EK
Sbjct: 120 LPEVFFTAWQNLFQLGGLKAGETVLIHG-GASGVGTAAIQLAKALGA-RVIATAGSEEKL 177
Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
E +A G +N + + +K T G G D + +G
Sbjct: 178 EACRALGADVAINYRTED--FAEEVKEATGGRGVDVILDMVG 217
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 5e-12
Identities = 66/269 (24%), Positives = 93/269 (34%), Gaps = 67/269 (24%)
Query: 14 KAAVAWGAGQPLVVEEVEVNP---PQPEEIRIKVVCTSLCRSDI---------------- 54
+A + G G + + P P P E+ I+V + +DI
Sbjct: 2 RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATD 61
Query: 55 -------TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTC-RQCK 106
W FPRI G + G V +VG GV GE VL R
Sbjct: 62 STGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVL------VDPSIRDPP 115
Query: 107 SDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166
D + +G ER G F+EYTVV + A V+S
Sbjct: 116 EDDPADIDYIGSERDG------------------------GFAEYTVVPAENAYPVNSPL 151
Query: 167 PLEKICLLSCGLSAGLGAAWNV---ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRII 222
++ C S A N+ A + G TV++ G G VG ++ Q AK RGA +I
Sbjct: 152 SDVELATFPCSYS----TAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVI 206
Query: 223 GVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251
V K E +A G + +
Sbjct: 207 AV-AGAAKEEAVRALGADTVILRDAPLLA 234
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 7e-12
Identities = 58/273 (21%), Positives = 95/273 (34%), Gaps = 65/273 (23%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR----I 66
+T K +G L + E P+ ++ IKV + R+D + + P I
Sbjct: 5 VTLKG---FGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEI 61
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
G E +G VE VG V F EG+ V+ + G
Sbjct: 62 LGLEVAGYVEDVGSDVKRFKEGDRVMALLPG----------------------------- 92
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
++EY V H G + + E+ + + AW
Sbjct: 93 -------------------GGYAEYAVAHKGHVMHIPQGYTFEE----AAAIPEAFLTAW 129
Query: 187 N----VADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
D+ KG +V+I G VG + AQ A+ GA+ II ++ EK + K
Sbjct: 130 QLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITT-SSEEKVDFCKKLAAII 188
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
+ D +V K + G + +C+G +
Sbjct: 189 LIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS 221
|
Length = 334 |
| >gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 2e-11
Identities = 66/290 (22%), Positives = 98/290 (33%), Gaps = 82/290 (28%)
Query: 16 AVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIFGH 69
A+ G L VE++ P P E ++V+ +C +D+ I FP + GH
Sbjct: 3 ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDL------EIYKGYYPFPGVPGH 56
Query: 70 EASGIVESVGPG-------VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
E GIVE V E N C C C+ GL
Sbjct: 57 EFVGIVEEGPEAELVGKRVVGEINIA----------CGRCEYCRR---------GLYT-- 95
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG- 181
H +T I + +F+EY PLE + ++ +
Sbjct: 96 --HCPNRTVLGIVDRD-------GAFAEYLT------------LPLENLHVVPDLVPDEQ 134
Query: 182 ------LGAAWNVAD---ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
L AA + + I+ G V + G G +GL +AQ G ++ V + EK
Sbjct: 135 AVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLA 193
Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQ 282
A+ GV L +E GG D E G + AL+
Sbjct: 194 LARRLGVETVLPDEAESE----------GGGFDVVVEATGSPSGLELALR 233
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 6e-11
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 34/226 (15%)
Query: 37 PEEIRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-L 92
PE++ IKV+ +C +D+ + + +P + GHE G V VG V++F G+ V +
Sbjct: 34 PEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGV 93
Query: 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT 152
V +G C C CKSD C +R ++D T GKP F+
Sbjct: 94 GVIVGCCGECSPCKSDLEQYC-----NKRIWSYNDVYT----DGKPTQ-----GGFASAM 139
Query: 153 VVHSGCAVKV-SSIAPLEKICLLSCGLSA-------GLGAAWNVADISKGSTVVIFGLGT 204
VV VK+ +AP + LL G++ GL G I GLG
Sbjct: 140 VVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGL--------KQSGLRGGILGLGG 191
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
VG + AKA G + ++ ++ E + G ++L +D E
Sbjct: 192 VGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAE 237
|
Length = 357 |
| >gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 62.6 bits (152), Expect = 7e-11
Identities = 76/328 (23%), Positives = 125/328 (38%), Gaps = 31/328 (9%)
Query: 6 KQPQVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-- 60
K P+ + A W A P L E++ +K++ +C SD+ + +
Sbjct: 3 KSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG 62
Query: 61 -AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGL 118
+P + GHE GIV +G V +F EG+ V + V +G CK+C C D N C +
Sbjct: 63 FTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIF 122
Query: 119 ERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGL 178
+ H + +S+ VV ++ PL+ L C
Sbjct: 123 TYNSIGHDGTKN--------------YGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAG 168
Query: 179 SAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF 237
G + + GLG +G + KA G ++ + ++ K ++A
Sbjct: 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL 227
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
G FL D E ++ I G DY + + + L G +TLG+P
Sbjct: 228 GADSFLVSTD-PEKMKAAI-----GTMDYIIDTVSAVHALGPLL-GLLKVNGKLITLGLP 280
Query: 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
+ KP + L L + + GS GG K
Sbjct: 281 E-KPLELPIFPLVLGRKLVGGSDIGGIK 307
|
Length = 360 |
| >gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 4e-10
Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 43/290 (14%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFP 64
+ ++ V G + + V E E+ +++ +C SD+ ++ P
Sbjct: 3 VKTQSCVVAGK-KDVAVTEQEIEW-NNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAP 60
Query: 65 RIFGHEASG-IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
+ GHE G IV S G+ EG+ V C C+ C S N C
Sbjct: 61 MVLGHEVIGKIVHSDSSGL---KEGQTVAINPSKPCGHCKYCLSHNENQCT--------- 108
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
RF G +Y F+ Y VV + + A EK+ + L+ +
Sbjct: 109 -----TMRFF--GSAMYFPHVDGGFTRYKVVDTAQCIPYPEKAD-EKVMAFAEPLAVAIH 160
Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
AA D+ +G V + G+G +G + K GA+ I+ D +P A+ G + +
Sbjct: 161 AAHQAGDL-QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219
Query: 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVT 293
NP +++ + K G D SFE G +++ +C L VT
Sbjct: 220 NPQNDDLDHYKAEK----GYFDVSFEVSGH----PSSINTC-----LEVT 256
|
Length = 343 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 4e-10
Identities = 74/306 (24%), Positives = 107/306 (34%), Gaps = 84/306 (27%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDI-----TAWETQAIFPRI 66
KA V G P V E EV PQP ++ ++V + + D A P I
Sbjct: 2 KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPP-LPAI 60
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
G + +G+VE+VG GVT F G+ EV G
Sbjct: 61 LGCDVAGVVEAVGEGVTRFRVGD------------------------EVYGCAG------ 90
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGLGAA 185
+ G S +EY VV + A+K ++++ E L A
Sbjct: 91 ------GLGGLQ-------GSLAEYAVVDARLLALKPANLSMREAAAL-----PLVGITA 132
Query: 186 WNV----ADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
W A + G TV+I G G VG Q AKA GA R+ ++ EK A++ G
Sbjct: 133 WEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGAD 190
Query: 241 EFLNPNDNNEPVQQVIKRITD-----------GGA--DYSFECIGDTGMITTALQSCCDG 287
+ E V + + T GG D SFE + G + + G
Sbjct: 191 PIIYY---RETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVS----ILGG 243
Query: 288 WGLAVT 293
+
Sbjct: 244 ATHDLA 249
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 6e-10
Identities = 68/251 (27%), Positives = 99/251 (39%), Gaps = 59/251 (23%)
Query: 27 VEEVEVNPPQPEEIRIKVVCTSLCRSDI--TA--WETQAIFPRIFGHEASGIVESVGPGV 82
+ +V V P P E+ +K + SDI TA ++ P G E G V +VG GV
Sbjct: 20 IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGV 79
Query: 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHY 142
T+F G+ V T+ G
Sbjct: 80 TDFKVGDAVATMSFG--------------------------------------------- 94
Query: 143 CAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV-VIFG 201
+F+EY VV + AV V + P E + LL GL+A + A V ++ G TV V
Sbjct: 95 ----AFAEYQVVPARHAVPVPELKP-EVLPLLVSGLTASI-ALEEVGEMKSGETVLVTAA 148
Query: 202 LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261
G G Q AK G +IG ++ EK E K+ G +N E + +V+K+
Sbjct: 149 AGGTGQFAVQLAKLAG-CHVIGTCSSDEKAEFLKSLGCDRPINY--KTEDLGEVLKKEYP 205
Query: 262 GGADYSFECIG 272
G D +E +G
Sbjct: 206 KGVDVVYESVG 216
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 2e-09
Identities = 63/241 (26%), Positives = 94/241 (39%), Gaps = 56/241 (23%)
Query: 31 EVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGPGVTEFN 86
EV PP P E+RI+V SL D+ + T +P G EASG+V +VGP VT
Sbjct: 1 EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60
Query: 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS 146
G+ V+ GE T ++ V A
Sbjct: 61 VGDEVI-AGTGE-------------------------SMGGHATLVTVPEDQVVRKPASL 94
Query: 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVI-FGLGTV 205
SF E CA+ V + ++ A+ A ++KG ++I G
Sbjct: 95 SFEE------ACALPVVFLTVID---------------AFARAGLAKGEHILIQTATGGT 133
Query: 206 GLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GA 264
GL Q A+ +GA I ++ +K E K GV +N + + ++ I R+T G G
Sbjct: 134 GLMAVQLARLKGAE-IYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGV 190
Query: 265 D 265
D
Sbjct: 191 D 191
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 4e-09
Identities = 60/237 (25%), Positives = 90/237 (37%), Gaps = 53/237 (22%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIFG 68
KA V G P L + E+ + P+P + I+V L RS+I + FPR+ G
Sbjct: 2 KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
EA G VE PG F G+ V T +G +G G
Sbjct: 62 IEAVGEVEE-APG-GTFTPGQRVAT-AMGG-----------------MGRTFDG------ 95
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
S++EYT+V + + S ++ L G+ +
Sbjct: 96 ------------------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRS 137
Query: 189 ADISKGSTVVIFGLGT--VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
+ G T++I G GT VGL+ + AKA GA + +PE+ K G E +
Sbjct: 138 LGLQPGDTLLIRG-GTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVV 192
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 6e-09
Identities = 73/305 (23%), Positives = 120/305 (39%), Gaps = 43/305 (14%)
Query: 39 EIRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTV 94
++ +K++ +C SD+ + + +P I GHE GI VG VT+F EG+ V + V
Sbjct: 33 DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92
Query: 95 FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS------- 147
IG C++C C D N C K V+ Y + SS
Sbjct: 93 IIGSCQSCESCNQDLENYCP----------------------KVVFTYNSRSSDGTRNQG 130
Query: 148 -FSEYTVVHSGCAVKVSSIAPLEKICLLSC-GLSAGLGAAWNVADISKGSTVVIFGLGTV 205
+S+ VV + + P + L C G++ + G + + GLG +
Sbjct: 131 GYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGL 190
Query: 206 GLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265
G + KA G + ++ ++ E G FL D+ Q +K G D
Sbjct: 191 GHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS-----QKMKEAV-GTMD 244
Query: 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
+ + + + L S G V LG+P+ KP + L L + + GS GG K
Sbjct: 245 FIIDTVSAEHAL-LPLFSLLKVSGKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGGMK 302
Query: 326 PKTDL 330
++
Sbjct: 303 ETQEM 307
|
Length = 375 |
| >gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 4e-08
Identities = 79/331 (23%), Positives = 122/331 (36%), Gaps = 62/331 (18%)
Query: 16 AVAWGAGQP-LVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFPR-----IF 67
A+A G+P + V ++ P P E+ ++ + +C +D I A E P +
Sbjct: 3 AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEY-GTAPPGEDFLVL 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
GHEA G+VE VG G + + G+ V+ C C+ + + CE +
Sbjct: 62 GHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCE-----------TG 109
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
+ T IKG + EY V VKV L + +L LS + A
Sbjct: 110 EYTERGIKGLHGF-------MREYFVDDPEYLVKVP--PSLADVGVLLEPLSV-VEKAIE 159
Query: 188 VAD-ISK------GSTVVIFGLGTVGLSVAQGAKARG-----ASRIIGVDTNPEKCEKAK 235
A+ + K ++ G G +GL A + RG +R D K + +
Sbjct: 160 QAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNR---RDPPDPKADIVE 216
Query: 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQ--SCCDGWGLAVT 293
G T N + PV +V G D E TG+ A + G+ +
Sbjct: 217 ELGATYV---NSSKTPVAEVKL---VGEFDLIIEA---TGVPPLAFEALPALAPNGVVIL 267
Query: 294 LGVPKLKPEV-----AAHYGLFLSGRTLKGS 319
GVP E + L L + L GS
Sbjct: 268 FGVPGGGREFEVDGGELNRDLVLGNKALVGS 298
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 5e-08
Identities = 56/270 (20%), Positives = 89/270 (32%), Gaps = 77/270 (28%)
Query: 14 KAAV--AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIF 67
+A +GA L + ++ V P P E+ ++V + + D A+ P +
Sbjct: 2 RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVP 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
G + +G+VE+VG GV G+ V L
Sbjct: 62 GSDGAGVVEAVGEGVDGLKVGDRVWLT----------------------NLGWGRRQ--- 96
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
+ +EY VV P +++ L G+S GAA
Sbjct: 97 ------------------GTAAEYVVV------------PADQLVPLPDGVSFEQGAALG 126
Query: 188 V------------ADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234
+ A G TV++ G G VG + Q A+ GA R+I ++ E E
Sbjct: 127 IPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELV 185
Query: 235 KAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264
+ G N E + I T G
Sbjct: 186 RQAGADAVFNYRA--EDLADRILAATAGQG 213
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 5e-07
Identities = 55/259 (21%), Positives = 90/259 (34%), Gaps = 64/259 (24%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGP 80
L V E ++ P E+ +KV + + +D+ + Q P G++ G V+++G
Sbjct: 15 LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGS 74
Query: 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVY 140
GVT F G+ V L R G
Sbjct: 75 GVTGFEVGD------------------------RVAALTRVG------------------ 92
Query: 141 HYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVI 199
+EY + + V V + E +CL+ ++A A + G V+I
Sbjct: 93 ------GNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTA-YQMLHRAAKVLTGQRVLI 145
Query: 200 FGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIK 257
G G VG ++ + A GA + G T E+ A + G T + P
Sbjct: 146 HGASGGVGQALLELALLAGA-EVYG--TASERNHAALRELGATPIDYRTKDWLPA----- 197
Query: 258 RITDGGADYSFECIGDTGM 276
+T GG D F+ +G
Sbjct: 198 MLTPGGVDVVFDGVGGESY 216
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 7e-07
Identities = 68/282 (24%), Positives = 98/282 (34%), Gaps = 89/282 (31%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWETQAIFP------R 65
KA G P V+ VEV P P+ E+ I+V + R D+ + +P
Sbjct: 2 KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLL--QRAGKYPPPPGASD 59
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I G E +G V +VG GV+ + G+ V L
Sbjct: 60 ILGLEVAGEVVAVGEGVSRWKVGD------------------------RVCAL------- 88
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
A ++EY V +G + V GLS AA
Sbjct: 89 -----------------VAGGGYAEYVAVPAGQVLPVPE------------GLSLVEAAA 119
Query: 186 --------W-NVADI---SKGSTVVIFGLGTVGLSVA--QGAKARGASRIIGVDTNPEKC 231
W N+ G TV+I G G G+ Q AKA GA R+ + EKC
Sbjct: 120 LPETFFTVWSNLFQRGGLKAGETVLIHG-GASGIGTTAIQLAKAFGA-RVFTTAGSDEKC 177
Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
+A G +N + + +V+K T G G D + +G
Sbjct: 178 AACEALGADIAINYREEDFV--EVVKAETGGKGVDVILDIVG 217
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Score = 49.8 bits (120), Expect = 8e-07
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 17/88 (19%)
Query: 18 AWGAGQPLVVE--------EVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIF 63
A G QPL + E+ P ++ ++V S+ R+ Q
Sbjct: 3 AIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQ--- 59
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHV 91
P+I G +ASG+VE+VG VT F G+ V
Sbjct: 60 PKILGWDASGVVEAVGSEVTLFKVGDEV 87
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336 |
| >gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-06
Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 26/199 (13%)
Query: 24 PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGP 80
PL E V P P E+ ++V +CR+D+ E R GHE G V G
Sbjct: 14 PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGA 73
Query: 81 GVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV 139
F G+ V ++ C CR C+ N C +R++
Sbjct: 74 DAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCP--------------ASRYT------ 113
Query: 140 YHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVI 199
+ ++EYT V + A ++ + ++ L C G A A + G + +
Sbjct: 114 -GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGL 171
Query: 200 FGLGTVGLSVAQGAKARGA 218
+G G AQ A A+GA
Sbjct: 172 YGFGGSAHLTAQVALAQGA 190
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329 |
| >gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 30/190 (15%)
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVL---TVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
I G +ASG+V VGPGVT + G+ V+ R S+ + G E
Sbjct: 80 IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWGYE--- 136
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSA- 180
T F SF+E+ +V K + E C G +A
Sbjct: 137 -------TNFG-------------SFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAY 176
Query: 181 GLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
WN A + G V+I+G G +G Q A+A G + + V ++PEK E ++ G
Sbjct: 177 RQLVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPV-AVVSSPEKAEYCRSLGA 235
Query: 240 TEFLNPNDNN 249
++ ND
Sbjct: 236 EAVIDRNDFG 245
|
The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398 |
| >gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 46/213 (21%), Positives = 74/213 (34%), Gaps = 28/213 (13%)
Query: 182 LGAAWNVAD-----ISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
LG A+ + + + S V++ G T VG Q AK + + E K
Sbjct: 135 LGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNK 194
Query: 236 AFGVTEFLN--PNDNNEPVQQVIKRITDGGA-DYSFECIGDT---GMITTALQSCCDGWG 289
G F++ + + ++ V++ + G D +C+G I + L+ G
Sbjct: 195 KLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-G 253
Query: 290 LAVTL-GVPKL---KPEVAAHYGLFLSGRTLKGSLFGGW---------KPKTDLPSLVNR 336
VT+ G K K + + R L GSL G W P D
Sbjct: 254 HYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSL-GLWSYNYQFFLLDPNADWIEKCAE 312
Query: 337 YLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC 369
+ V I FED +AF +K +
Sbjct: 313 LIADG-KVKPPIDSVYPFEDYKEAFERLKSNRA 344
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Query: 20 GAGQPLVVEEVEV--NPPQPEEIRIKVVCTSLCRSDITAWETQAI---------FPRIFG 68
G PLV+E V + PP P E+ ++++ + SD+ I P + G
Sbjct: 7 GEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLIT-----ISGAYGSRPPLPAVPG 61
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVF 95
+E G+V VG GV+ G+ VL +
Sbjct: 62 NEGVGVVVEVGSGVSGLLVGQRVLPLG 88
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 3e-06
Identities = 40/194 (20%), Positives = 60/194 (30%), Gaps = 75/194 (38%)
Query: 39 EIRIKVVCTSLCRSDI-TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
E+ ++V L D+ A G E SGIV VG GVT G+ V+ + G
Sbjct: 2 EVEVEVKAAGLNFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAPG 61
Query: 98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
+F+ + V +
Sbjct: 62 -------------------------------------------------AFATHVRVDAR 72
Query: 158 CAVKVSSIAPLEKICLLSCGLS----AGLGAAW--------NVADISKGSTVVIF-GLGT 204
VK+ LS A L A+ ++A + KG +V+I G
Sbjct: 73 LVVKIPD------------SLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGG 120
Query: 205 VGLSVAQGAKARGA 218
VG + Q A+ GA
Sbjct: 121 VGQAAIQLAQHLGA 134
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|237820 PRK14806, PRK14806, bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 5e-06
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 197 VVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
VV+ GLG +G S A+ + RG A ++ VD + E A + GV
Sbjct: 6 VVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGV 49
|
Length = 735 |
| >gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 1e-05
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 14 KAAVAWGAGQPL-VVEEVEVNPPQPE--EIRIKVVCTSLCRSDI----TAWETQAIFPRI 66
+AAV G P V+E EV P P E+ ++ + + D+ + + P I
Sbjct: 2 RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAI 61
Query: 67 FGHEASGIVESVGPGVTEFNEGEHV 91
G EA G+V++VG GV G+ V
Sbjct: 62 GGSEAVGVVDAVGEGVKGLQVGQRV 86
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-05
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
++I G G VG S+A+ + G ++ +D +PE+ E+ + GV
Sbjct: 1 IIIIGYGRVGRSLAEELREGG-PDVVVIDKDPERVEELREEGVP 43
|
This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116 |
| >gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 42/246 (17%)
Query: 22 GQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFP-------------R 65
G P + +E+V V P E+ + V+ + +++ A + +
Sbjct: 24 GDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH 83
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I G +ASGIV +VG GV + G+ V+ C N E G M
Sbjct: 84 IGGSDASGIVWAVGEGVKNWKVGDEVVV----------HCSVWDGNDPERAG---GDPMF 130
Query: 126 SDQQTRFSIKGKPVYHY-CAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSA-GL 182
Q ++ Y SF+++ +V + K ++ E + G +A +
Sbjct: 131 DPSQR--------IWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRM 182
Query: 183 GAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
WN + G V+I+G G +G Q A+A GA + V ++ EK E +A G
Sbjct: 183 LFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEG 241
Query: 242 FLNPND 247
+N D
Sbjct: 242 VINRRD 247
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 144 AVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISK---GSTVVI 199
VS + EY + K+ S APL L G+ GL A + + DI + G TVV+
Sbjct: 99 GVSGWQEYAISDGEGLRKLDPSPAPLSAY-LGVLGMP-GLTAYFGLLDIGQPKAGETVVV 156
Query: 200 FGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQVIK 257
G VG V Q AK +G R++G+ EKC+ G ++ + Q +K
Sbjct: 157 SAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQALK 213
Query: 258 RITDGGADYSFECIG 272
G D FE +G
Sbjct: 214 EACPKGIDVYFENVG 228
|
Length = 340 |
| >gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 5e-05
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
+++ G G VG VA G + D + EKC +
Sbjct: 4 ILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI 45
|
Length = 389 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 7e-05
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
+A V G G L VE+ + P E+R++V L +D+ A +++ P +
Sbjct: 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVP 60
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTV 94
G E +G VE+VG GV +F G+ V+ +
Sbjct: 61 GFECAGTVEAVGEGVKDFKVGDRVMGL 87
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Score = 44.0 bits (105), Expect = 7e-05
Identities = 38/143 (26%), Positives = 54/143 (37%), Gaps = 23/143 (16%)
Query: 143 CAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-------AW----NVADI 191
+ EY VV S + L+ L LSA LG A+ +
Sbjct: 91 SGFLGWQEYAVVDGA-----SGLRKLDPSLGLP--LSAYLGVLGMTGLTAYFGLTEIGKP 143
Query: 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNN 249
G TVV+ G VG V Q AK GA R++G+ + EKC G +N
Sbjct: 144 KPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT-- 200
Query: 250 EPVQQVIKRITDGGADYSFECIG 272
+ + +K G D F+ +G
Sbjct: 201 PDLAEALKEAAPDGIDVYFDNVG 223
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|234950 PRK01390, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 5e-04
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
G TV +FGLG GL+ A+ A GA +I D NP KA A G+T
Sbjct: 8 AGKTVAVFGLGGSGLATARALVAGGA-EVIAWDDNPASRAKAAAAGIT 54
|
Length = 460 |
| >gnl|CDD|223364 COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253
V I GLG +G S+A+ K G RIIG D + + A GV + L E
Sbjct: 5 KVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAA 63
|
Length = 279 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 25 LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDI--------TAWETQAIFPRIFGHEASGIV 75
L +E E+ PP P E+ +K++ + +DI T P + G+E G V
Sbjct: 16 LQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEV 75
Query: 76 ESVGPGVTEFNEGEHVL 92
VG GV G+ V+
Sbjct: 76 VKVGSGVKSLKPGDWVI 92
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 6e-04
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
G TV+I GLG +G +A+ AKA G R+IGV +
Sbjct: 133 AGKTVLIVGLGDIGREIARRAKAFGM-RVIGVRRSGRPAP 171
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313 |
| >gnl|CDD|223643 COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
++I G G VG SVA+ G + ++ +D + E+ E+ A
Sbjct: 2 KIIIIGAGRVGRSVARELSEEGHN-VVLIDRDEERVEEFLA 41
|
Length = 225 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 39.3 bits (93), Expect = 0.002
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
+ G E +G+V VGPGVT G+ V+ + G
Sbjct: 23 EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPG 56
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 188 VADISKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
+ G V+ VG + Q AK G + I V E+ E+ KA G E + +
Sbjct: 133 YLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVI--D 189
Query: 247 DNNEPVQQVIKRITDG-GADYSFECIG--DTGMITTALQ 282
+ E + Q +K T G GA + + +G + +L+
Sbjct: 190 SSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLR 228
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|235824 PRK06545, PRK06545, prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTE 241
TV+I GLG +G S+A KA G IIG D + + +A FGV +
Sbjct: 2 TVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVID 48
|
Length = 359 |
| >gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Score = 38.2 bits (90), Expect = 0.003
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
G TV I GLG +G +VA+ KA G ++I D P+ +A+A G
Sbjct: 35 GKTVGIIGLGRIGRAVARRLKAFGM-KVIAYDRYPK--AEAEALGAR 78
|
This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175 |
| >gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.003
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT 240
+G TV + GLG VG +A+ GA ++I D N E +A FG T
Sbjct: 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT 74
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200 |
| >gnl|CDD|181452 PRK08507, PRK08507, prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.004
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 197 VVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
+ I GLG +G S+ K +G S++ G D N +KA G+
Sbjct: 3 IGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALELGL 46
|
Length = 275 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.004
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 16/76 (21%)
Query: 18 AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-----------AIFPRI 66
+G + LV E+V P P ++RI V + + +TQ P +
Sbjct: 8 EFGPPEVLVPEDVPDPVPGPGQVRIAVAA-----AGVHFVDTQLRSGWGPGPFPPELPYV 62
Query: 67 FGHEASGIVESVGPGV 82
G E +G+V++VGPGV
Sbjct: 63 PGGEVAGVVDAVGPGV 78
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 378 | |||
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 100.0 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 100.0 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 100.0 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 100.0 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 100.0 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 100.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 100.0 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 100.0 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 100.0 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 100.0 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 100.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 100.0 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 100.0 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 100.0 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 100.0 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 100.0 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 100.0 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 100.0 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 100.0 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 100.0 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 100.0 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 100.0 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.98 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.97 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.96 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.95 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.88 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.71 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.41 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.31 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 99.26 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.57 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.48 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.4 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.34 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 98.27 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.21 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.19 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.05 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 98.04 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 97.92 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.87 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.84 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 97.78 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.69 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 97.67 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 97.66 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.62 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 97.53 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.48 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.45 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.38 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.36 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 97.33 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.32 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.25 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.23 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.19 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 97.18 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.15 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.13 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 97.13 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.11 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.07 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 97.06 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.01 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 96.97 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.96 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.95 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.92 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 96.9 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 96.9 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 96.89 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.87 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.83 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.83 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 96.82 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 96.82 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.81 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 96.79 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 96.78 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 96.75 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.74 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 96.72 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 96.71 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.71 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 96.7 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.7 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 96.7 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.68 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 96.67 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 96.66 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 96.66 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.64 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 96.64 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.63 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.61 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.61 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 96.6 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.6 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 96.6 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.6 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 96.59 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.59 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.58 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.58 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.57 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.56 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 96.54 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.52 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 96.52 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 96.51 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 96.49 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.48 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.48 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 96.46 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.46 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.45 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 96.44 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.42 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 96.38 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 96.36 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.35 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 96.34 | |
| PLN02366 | 308 | spermidine synthase | 96.34 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 96.34 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.34 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 96.33 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.33 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 96.33 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 96.32 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.32 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.3 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.3 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 96.29 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.29 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.28 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 96.28 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.28 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.28 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.27 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 96.26 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 96.26 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.25 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 96.25 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.24 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 96.24 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 96.23 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.23 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.22 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 96.22 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.21 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 96.2 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 96.19 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 96.19 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.19 | |
| PRK00536 | 262 | speE spermidine synthase; Provisional | 96.18 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.18 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.17 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 96.16 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 96.16 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.15 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 96.15 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 96.14 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.14 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 96.13 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 96.13 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.13 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 96.12 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 96.12 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 96.11 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 96.11 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 96.11 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 96.1 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.1 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 96.09 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 96.08 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 96.08 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 96.08 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 96.07 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 96.06 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 96.06 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.06 | |
| PRK05717 | 255 | oxidoreductase; Validated | 96.04 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 96.03 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 96.03 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 96.02 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 96.02 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 96.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.0 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 95.99 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 95.99 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 95.98 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 95.98 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.98 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 95.98 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 95.97 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 95.97 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 95.97 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 95.97 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 95.96 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 95.96 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 95.95 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.93 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 95.93 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 95.93 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 95.93 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 95.91 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 95.91 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 95.91 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 95.9 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 95.9 | |
| PRK08643 | 256 | acetoin reductase; Validated | 95.9 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 95.89 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 95.89 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 95.88 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.88 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 95.87 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 95.87 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 95.86 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 95.83 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 95.83 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.82 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.82 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 95.82 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 95.8 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 95.8 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 95.8 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.8 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 95.79 | |
| PLN02476 | 278 | O-methyltransferase | 95.79 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 95.78 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 95.78 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 95.76 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 95.76 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 95.76 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 95.72 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.72 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 95.71 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 95.69 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 95.68 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 95.68 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 95.67 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 95.67 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 95.66 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.66 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.64 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 95.63 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 95.63 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 95.63 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 95.62 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 95.6 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.58 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 95.54 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.54 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 95.53 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.53 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.52 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 95.52 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 95.5 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.48 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 95.46 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 95.44 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 95.42 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 95.42 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 95.41 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 95.39 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 95.39 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 95.38 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 95.38 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 95.38 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 95.38 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.36 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 95.36 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 95.36 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 95.35 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 95.35 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.34 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.33 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 95.3 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.29 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.29 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 95.26 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 95.23 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.23 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 95.22 | |
| COG0421 | 282 | SpeE Spermidine synthase [Amino acid transport and | 95.22 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.2 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 95.18 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 95.18 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 95.18 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 95.16 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.14 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.14 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 95.14 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 95.14 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 95.12 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 95.12 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 95.11 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.09 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.09 | |
| PLN02823 | 336 | spermine synthase | 95.08 | |
| PF01596 | 205 | Methyltransf_3: O-methyltransferase; InterPro: IPR | 95.06 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 95.02 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.0 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 94.98 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 94.97 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 94.95 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 94.93 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 94.87 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 94.86 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 94.86 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 94.85 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 94.85 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 94.85 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 94.85 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 94.84 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 94.84 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 94.83 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 94.82 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 94.82 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 94.8 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.8 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 94.8 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.77 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 94.76 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 94.74 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.71 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 94.7 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 94.69 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 94.68 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.68 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 94.67 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 94.67 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 94.66 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 94.62 | |
| PLN02928 | 347 | oxidoreductase family protein | 94.62 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 94.58 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 94.58 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 94.56 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 94.55 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 94.54 | |
| PLN02589 | 247 | caffeoyl-CoA O-methyltransferase | 94.54 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.54 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.51 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 94.47 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 94.47 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 94.45 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 94.43 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 94.43 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 94.4 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 94.4 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 94.39 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 94.34 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 94.34 | |
| PRK10637 | 457 | cysG siroheme synthase; Provisional | 94.33 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 94.31 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 94.31 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 94.23 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 94.22 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 94.21 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 94.19 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 94.17 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 94.17 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 94.15 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 94.13 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 94.11 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 94.11 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.07 | |
| TIGR03215 | 285 | ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati | 94.07 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 94.06 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 94.06 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.04 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 94.04 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 94.01 | |
| PF08704 | 247 | GCD14: tRNA methyltransferase complex GCD14 subuni | 94.01 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 94.0 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 94.0 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 93.98 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 93.96 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 93.96 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 93.96 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 93.95 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 93.94 | |
| PRK08223 | 287 | hypothetical protein; Validated | 93.93 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.93 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 93.93 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.92 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 93.92 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 93.91 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 93.89 | |
| TIGR00563 | 426 | rsmB ribosomal RNA small subunit methyltransferase | 93.88 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 93.83 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 93.82 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 93.81 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 93.79 | |
| PRK07411 | 390 | hypothetical protein; Validated | 93.79 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 93.79 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 93.78 |
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-65 Score=441.47 Aligned_cols=370 Identities=55% Similarity=0.995 Sum_probs=353.4
Q ss_pred cccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCC
Q 017052 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+..++++||++.+++++||.++++..++|+.+||+||+.++++|++|...|.|.. .+|.++|||.+|+|+.+|..|.
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 3467899999999999999999999999999999999999999999999999874 6799999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
.+++||+|+..+...|+.|.+|+++..|.|....... .+..+.||..||+.+|+++||+.+..+|+||.+++...+.+|
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 9999999999999999999999999999999998877 566656999999999999999999999999999999999999
Q ss_pred CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 163 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
+++.+++.++.+.|.+.|+|.|.+..+.+++|++|.|.|-|++|+++++-||..|++++|+++.+++|.+.++++|+++.
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~ 241 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEF 241 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeec
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
+|..+......+.+.+.|++++|+-|||+|..+.+.+++.++.++||+-+.+|.......+.+.++.++++.++.|+.++
T Consensus 242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FG 321 (375)
T KOG0022|consen 242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFG 321 (375)
T ss_pred cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecc
Confidence 99875445688999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.|+++.+++.+++.+.++++.++.+|++++|++++++||+.|.+++.+|-||.+
T Consensus 322 G~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 322 GFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred cccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999999999888764
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-65 Score=450.15 Aligned_cols=363 Identities=46% Similarity=0.833 Sum_probs=343.7
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
+++||++..++++||+++++++++|+++||+||+.++|+|++|.....|.. .+|.++|||.+|+|++||+.|+++++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpG 80 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPG 80 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCceecccccccEEEEecCCccccCCC
Confidence 468999999999999999999999999999999999999999999999987 789999999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
|+|+..+...|+.|..|++|++|+|....-.. .|.. .||+.++...+++++++.+.++|+||.++++..++++++.++
T Consensus 81 DhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 81 DHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 99999999999999999999999999655443 5644 899999999999999999999999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
++.++.+.|...|.+.+....+++++|++|.|.|.|++|++++|-|+..|+.++|+++.+++|++++++||+++++|..+
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~ 239 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE 239 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence 99999999999999999989999999999999999999999999999999999999999999999999999999999873
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcC
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
.. +..+.+.+++++++|++|||+|....++.++.++.+ ||+.+.+|.......+++++..+..+.+++|++++.-.++
T Consensus 240 ~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~ 317 (366)
T COG1062 240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR 317 (366)
T ss_pred hh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence 22 699999999999999999999999999999999999 6999999998888888899999888999999999988888
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.++++++++..+|++++++++++.++|+||+|||+.+.+++.+|-||++
T Consensus 318 ~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 9999999999999999999999999999999999999999999888865
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-65 Score=456.58 Aligned_cols=332 Identities=31% Similarity=0.462 Sum_probs=300.2
Q ss_pred ccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCC
Q 017052 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
+++|||++++++++|+++.+++.|+|+|+||+|+|+|+|+|++|++.+.|.. .+|++||||++|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 4789999999999999999999999999999999999999999999999987 6899999999999999999999999
Q ss_pred CCCEEEe-ecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 87 EGEHVLT-VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 87 ~Gd~V~~-~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
+||||.+ ++..+|+.|.+|++|+++.|++....++. ..|+|+||+++|++++++||++
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~---------------------~~GGyaeyv~v~~~~~~~iP~~ 139 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT---------------------TDGGYAEYVVVPARYVVKIPEG 139 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccccee---------------------ecCcceeEEEEchHHeEECCCC
Confidence 9999988 89999999999999999999997764322 2369999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++||.+.|+..|+|++| +..++++|++|+|+|+|++|++++|+|+++|+ +|++++++++|++.+++||++++++.
T Consensus 140 ~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~ 217 (339)
T COG1064 140 LDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINS 217 (339)
T ss_pred CChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEc
Confidence 99999999999999999998 66999999999999999999999999999998 99999999999999999999999988
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~ 324 (378)
+ +.+..+.+++. +|+++|+++ +..+..+++.|+++ |+++.+|.........++.. .+++++++.|+..+.
T Consensus 218 ~--~~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~- 288 (339)
T COG1064 218 S--DSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT- 288 (339)
T ss_pred C--CchhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC-
Confidence 6 56666666653 999999999 78999999999997 99999999852233334444 345799999998876
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
+.+.++++++..++++++. +.+.++++++++|++.|++++.. |+||.+.
T Consensus 289 --~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 --RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred --HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 5689999999999998776 44799999999999999999997 9999875
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-58 Score=402.31 Aligned_cols=340 Identities=26% Similarity=0.421 Sum_probs=300.7
Q ss_pred cceeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
.+|+|+++++++. +++.+.|+|++ .|+||+|++.++|||++|++.|.... ..|.++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4689999999996 99999999986 99999999999999999999998766 4799999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
.+++||||.+.|..+|+.|..|++|+||.|....+...+.. .|++++|++.+++.++|+|
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~--------------------~G~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPV--------------------DGTLAEYYVHPADFCYKLP 141 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCc--------------------CCceEEEEEechHheeeCC
Confidence 99999999999999999999999999999999988654422 3699999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
|++|+|++|.+. +++++|+|. ++++++.|.+|||+|||++|+.++..||.+|+.+|++++..++|+++++++|++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999887 799999997 899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCC--chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEee
Q 017052 244 NPNDNN--EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320 (378)
Q Consensus 244 ~~~~~~--~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 320 (378)
+..... ..+.+.+....+. .+|+.|||+|....++.++..++.+ |+++.+|+.....++++.... .+++.+.|++
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v~-~kE~~~~g~f 297 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDVA-LKEVDLRGSF 297 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhhh-hheeeeeeee
Confidence 776322 3444555555544 6999999999988899999999997 999999887655555544443 5688888886
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEEeCCC
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVIHMPK 378 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~~~ 378 (378)
-+- ..+++.+++++.+|++.++++|++.|+++++.+||+.+..+.. +|++|..++
T Consensus 298 ry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 298 RYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 432 3489999999999999999999999999999999999988774 499998764
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-57 Score=392.74 Aligned_cols=344 Identities=25% Similarity=0.405 Sum_probs=303.7
Q ss_pred cccccceeeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCC
Q 017052 7 QPQVITCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~ 81 (378)
...|.+.++|.+..+++ ++++.+++.|+++++||+|+|+|+|||++|++.+.|.. .+|.++|||++|+|+++|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~ 83 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN 83 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence 45788999999999998 57779999999999999999999999999999999877 78999999999999999999
Q ss_pred CCcCCCCCEE-EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 82 VTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 82 v~~~~~Gd~V-~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
|++|++|||| +.....+|.+|.+|.+++++.|.+......|+. .||+ .++|+|++|+++++.+++
T Consensus 84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~-~DGt-------------~~~ggf~~~~~v~~~~a~ 149 (360)
T KOG0023|consen 84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVY-HDGT-------------ITQGGFQEYAVVDEVFAI 149 (360)
T ss_pred cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccc-cCCC-------------CccCccceeEEEeeeeEE
Confidence 9999999999 667788999999999999999998887777777 6663 346899999999999999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCC
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGV 239 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~ 239 (378)
+||++++.+.||.+.|+..|.|.+| .+.++.||++|-|.|+|++|.+++|+||++|. +|++++++. +|.+.++.||+
T Consensus 150 kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGA 227 (360)
T KOG0023|consen 150 KIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGA 227 (360)
T ss_pred ECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCc
Confidence 9999999999999999999999998 88899999999999997799999999999999 999998887 77888888999
Q ss_pred cEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEe
Q 017052 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS 319 (378)
Q Consensus 240 ~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 319 (378)
+.+++..+ +.++.+.+...+++++|-|.+. ..-.++.++.+++.+ |++|.+|.+.....++..+.. +..++|.|+
T Consensus 228 d~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~~~~~~~~~li-l~~~~I~GS 302 (360)
T KOG0023|consen 228 DVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEKPLKLDTFPLI-LGRKSIKGS 302 (360)
T ss_pred ceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCCcccccchhhh-cccEEEEee
Confidence 99888753 6788899998887777777765 335788999999998 999999998763333333332 568889999
Q ss_pred eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 320 LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
..++ +.+.+++++++.++.+... | +..+++++++|++.++.++.. |.||.+.
T Consensus 303 ~vG~---~ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 303 IVGS---RKETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred cccc---HHHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 8877 4689999999999998776 3 788999999999999999997 9999865
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-56 Score=421.27 Aligned_cols=373 Identities=52% Similarity=0.975 Sum_probs=310.7
Q ss_pred ccccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeC
Q 017052 4 SIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVG 79 (378)
Q Consensus 4 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG 79 (378)
|.++|+|++|||+++.++++++++++.+.|.|+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++|
T Consensus 2 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG 81 (381)
T PLN02740 2 SETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVG 81 (381)
T ss_pred ccccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeC
Confidence 5678899999999999999889999999999999999999999999999999988753 458899999999999999
Q ss_pred CCCCcCCCCCEEEeecccCCCCCcccccCCCCCccccccccccc-ccCCCcccccc--cCCcccccccccceeeEEEEeC
Q 017052 80 PGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV-MHSDQQTRFSI--KGKPVYHYCAVSSFSEYTVVHS 156 (378)
Q Consensus 80 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~-~~~~g~~~~~~--~~~~~~~~~~~g~~a~~~~v~~ 156 (378)
+++..|++||||++.+..+|+.|.+|..++++.|........+. ...+|..+++. .+...++....|+|+||+++|.
T Consensus 82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~ 161 (381)
T PLN02740 82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS 161 (381)
T ss_pred CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence 99999999999999999999999999999999999865321100 00011100000 0011111223479999999999
Q ss_pred CceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 157 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
+.++++|++++++++|.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.+++
T Consensus 162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~ 241 (381)
T PLN02740 162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241 (381)
T ss_pred HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence 99999999999999999999999999998788899999999999999999999999999999669999999999999999
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+|+++++++++.+.++.+.+++++.+++|++||++|++..+..++.++++++|+++.+|.......+++.+..+++++++
T Consensus 242 ~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i 321 (381)
T PLN02740 242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI 321 (381)
T ss_pred cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeE
Confidence 99999998763223577788887766899999999987889999999987449999999875433455555444568899
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.|+..+.+....+++++++++.++++++.++++++|+++++++|++.+.+++..|++|++
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 988776554345688999999999998888899999999999999999988878999874
|
|
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-55 Score=417.45 Aligned_cols=377 Identities=81% Similarity=1.363 Sum_probs=309.7
Q ss_pred CcccccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCC
Q 017052 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 2 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~ 81 (378)
|+|.++|....|||++++++++.+++++++.|.|+++||+|||.++|||++|++.+.+...+|.++|||++|+|+++|++
T Consensus 2 ~~~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~~~p~i~GhE~~G~V~~vG~~ 81 (378)
T PLN02827 2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQALFPRIFGHEASGIVESIGEG 81 (378)
T ss_pred CccccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCCCCCeeecccceEEEEEcCCC
Confidence 45677888899999999998877999999999999999999999999999999988775457889999999999999999
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
+++|++||+|++.+..+|+.|..|++|.++.|........|..+.++...+...|...++....|+|+||+.+|++.+++
T Consensus 82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~ 161 (378)
T PLN02827 82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
T ss_pred CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence 99999999999999899999999999999999875322112110000000000000000011237999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+++++++++.+++++.++|+++++.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|+++
T Consensus 162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 162 VDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence 99999999999999899999998877788999999999999999999999999999966888988999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeee
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
++++++.+.++.+.+++++.+++|+|||++|.+..+..+++.+++++|+++.+|.......+......+.+++++.|+..
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF 321 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence 99876322467777888776689999999998778899999999844999999986543222222223457889999877
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCCC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 378 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~~ 378 (378)
..+....++.++++++.++++++.++++++|+++++++|++.+++++..|+||.+++
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~~ 378 (378)
T PLN02827 322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMPK 378 (378)
T ss_pred CCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEecC
Confidence 655444578899999999999987789999999999999999999888899999874
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-54 Score=407.81 Aligned_cols=363 Identities=48% Similarity=0.895 Sum_probs=298.3
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++...++++++++++.|+|+++||+|||+++|+|++|++.+.|.. .+|.++|||++|+|+++|+.+.+|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 8999999998889999999999999999999999999999999888754 4588999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCccccccc-ccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
||++.+..+|+.|..|+.|+++.|...... ..|+. .+|..++...|...++..+.|+|+||+.+|.+.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999998999999999999999999874321 11221 1221111111111122123479999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++|.+++++.|||+++.+++++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|+++++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998788899999999999999999999999999999679999999999999999999999987632
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
+.++.+.+++++.+++|++|||+|++..+..+++++++++|+++.+|.......+.+.+..+..+..+.++.........
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 34567778888777899999999987788999999987449999999764333333333333344456666544333345
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
++.++++++.+++++++++++++|+|+++++|++.+++++..|++|++
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 689999999999998888899999999999999999888777999875
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=404.63 Aligned_cols=364 Identities=50% Similarity=0.955 Sum_probs=301.9
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
.+|||+++.+.++++++++.|.|.|+++||+|||+++|+|++|++.+.|.. .+|.++|||++|+|+++|+++.+|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 368999999998889999999999999999999999999999999887754 46889999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCccccccc-ccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|+..+..+|+.|.+|++++++.|...... +.|.. .+|..++...|...++..+.|+|+||+.++++.++++|+++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 99999998999999999999999999875321 11221 12211111222222222235799999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++++.|||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++++++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~ 239 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 99999999999999999987888999999999999999999999999999996699999999999999999999999886
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
+.+.++.+.+++++++++|+|||++|++..+..+++++++++|+++.+|.......+.+.+..+..+.++.++..+.+..
T Consensus 240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (368)
T cd08300 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKS 319 (368)
T ss_pred ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCc
Confidence 32235778888887778999999999877889999999874599999997643233343443334455677776655554
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
.+++.++++++.++++++.++++++|+|+++++||+.+++++..|++|+
T Consensus 320 ~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 320 RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 5678999999999999988889999999999999999998887799885
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-53 Score=404.97 Aligned_cols=358 Identities=36% Similarity=0.653 Sum_probs=297.8
Q ss_pred eeeEEeecCCC--------CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCC
Q 017052 13 CKAAVAWGAGQ--------PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 13 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v 82 (378)
|||+++.++|. .+++++.+.|+|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~v 80 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAAGVVVEVGEGV 80 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCCCCCccCCccceeEEEEeCCCC
Confidence 89999999763 38999999999999999999999999999999988854 468899999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
.+|++||||++.+..+|+.|..|++|+++.|....... .|.. .+|...+...+....+..+.|+|+||+.+|++.+++
T Consensus 81 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 81 TDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 99999999998888899999999999999998764321 1111 111100000000001111236999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+++++++|+.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 239 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999999999999878889999999999999999999999999999966999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEee
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL 320 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 320 (378)
++++. +.++.+.+++++++++|++|||+|.+..+..++++++++ |+++.+|.......+.+....+ .+++++.|++
T Consensus 240 ~i~~~--~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 240 TVNAG--DPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred EeCCC--chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 99886 567788888887768999999999878899999999997 9999999765333344444433 4688999987
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEE
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 374 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi 374 (378)
...+...++++++++++.++++++..+++++|+++++++||+.+++++..|.||
T Consensus 317 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 317 MGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 665443457889999999999998888999999999999999999998884443
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-53 Score=403.07 Aligned_cols=364 Identities=62% Similarity=1.128 Sum_probs=304.3
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
++|||+++.+++++++++++++|+|+++||+|||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 479999999998889999999999999999999999999999999888754 46889999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||||+..+..+|+.|..|+.|+++.|....... .|....++...+...|...+++...|+|+||+.+++..++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 999999999999999999999999998864321 1111001111111112222222234799999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++.+.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999999999999988888999999999999999999999999999986799999999999999999999998875
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
+.+..+.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+++.+..+++++++.|+....+..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 32245777788877668999999999877888999999983399999998764334455544445689999987766554
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEE
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 374 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi 374 (378)
+.+++++++++.++.+++.++++++|+++++++||+.+++++..|++|
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 557889999999999988888899999999999999999998889887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-53 Score=399.40 Aligned_cols=354 Identities=32% Similarity=0.554 Sum_probs=298.2
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
+|||+++.++++++++++.+.|+|+++||+|||.++|+|++|++.+.|.. .+|.++|||++|+|+++|+++.+|++||
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 80 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGD 80 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccccCCcccccceEEEEEEeCCCCcccCCCC
Confidence 69999999999889999999999999999999999999999999888753 5688999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.+..+|+.|..|.+|+++.|........+....+|. ........|+|+||+.+|++.++++|++++++
T Consensus 81 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~--------~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~ 152 (358)
T TIGR03451 81 YVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGT--------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPA 152 (358)
T ss_pred EEEEccCCCCCCChHHhCcCcccCcCccccccccccccCc--------ccccccccccccceEEEehhheEECCCCCChh
Confidence 9999999999999999999999998532211000000110 00000123799999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+|+.+++.+.++|+++.+.+.+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|+++++++. .
T Consensus 153 ~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~--~ 230 (358)
T TIGR03451 153 AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS--G 230 (358)
T ss_pred HhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC--C
Confidence 99999999999999887788899999999999999999999999999995699999999999999999999999886 5
Q ss_pred chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccCCcC
Q 017052 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 250 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~ 327 (378)
.++.+.+++++++ ++|++|||+|++..+..++.+++++ |+++.+|.......++++.. .+.+++++.+++.......
T Consensus 231 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 309 (358)
T TIGR03451 231 TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPE 309 (358)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcH
Confidence 5777888888877 8999999999877889999999997 99999998654333444432 3345788887765433234
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
++++++++++.++++++..+++++|+++++++|++.+++++..|++|.+
T Consensus 310 ~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 310 RDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred HHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 5788999999999998888899999999999999999998878888763
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-52 Score=396.09 Aligned_cols=363 Identities=53% Similarity=0.982 Sum_probs=304.6
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
+.|||+++.+.+++++++++|.|.++++||+|||+++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++|
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPG 80 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCCCCCCeecccceeEEEEeeCCCCccCCCC
Confidence 468999999988889999999999999999999999999999999988754 567899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|+|++.+..+|+.|..|.+|.++.|........|.. .++...++..|+..++..+.|+|+||+.++.+.++++|+++++
T Consensus 81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~ 159 (365)
T cd08277 81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL 159 (365)
T ss_pred CEEEECCCCCCCCCchhcCcCcccCcCccccccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence 999998899999999999999999988654433433 3332222222322222223579999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++++++..+.
T Consensus 160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~ 239 (365)
T cd08277 160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239 (365)
T ss_pred HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccc
Confidence 99999999999999998788899999999999999999999999999999679999999999999999999999887532
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
+..+.+.+++++.+++|+||||+|+...+..+++++++++|+++.+|.... ...++.+..+..++++.+++.+.+....
T Consensus 240 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 318 (365)
T cd08277 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSRS 318 (365)
T ss_pred cchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChHH
Confidence 234567777777668999999999877888999999874499999997653 2334444444458888888776654445
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
+++++++++.++.+++.++++++|+++++++|++.+++++..|++|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 319 DVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 78899999999999888889999999999999999998886799874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=387.12 Aligned_cols=334 Identities=29% Similarity=0.452 Sum_probs=288.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.+++. +++++.+.|.|+++||+|||.++++|++|++.+.+.+ .+|.++|||++|+|+++|++++.|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999998764 9999999999999999999999999999998876643 257899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|+|+..+..+|+.|..|+.|+.+.|..... ..|.. ..|+|+||+.+|.+.++++|+++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~g~~-------------------~~G~~ae~~~v~~~~~~~~P~~~~~ 139 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA-AYGWN-------------------RDGGHAEYMLVPEKTLIPLPDDLSF 139 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc-ccccC-------------------CCCcceeEEEechHHeEECCCCCCH
Confidence 999999999999999999999999986542 12221 2369999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++|+.+++++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++++++++
T Consensus 140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~-- 216 (339)
T cd08239 140 ADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG-- 216 (339)
T ss_pred HHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC--
Confidence 99999999999999998 667899999999999999999999999999994499999999999999999999999886
Q ss_pred CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
+.+ .+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.|++... .
T Consensus 217 ~~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~ 290 (339)
T cd08239 217 QDD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---V 290 (339)
T ss_pred cch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---H
Confidence 344 6677777777 8999999999977778899999997 99999997643 22332223345688998876543 3
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
+++.++++++.++.+++.++++++|+++++++||+.++++...|++|++
T Consensus 291 ~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 291 PDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 5789999999999998888899999999999999999887756999875
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-50 Score=378.21 Aligned_cols=334 Identities=22% Similarity=0.358 Sum_probs=275.0
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccc-cCC-----CCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
..+||++++++++ +++++.+.| ++++||+|||.++|||++|++.+. |.. .+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 4578999998887 999999987 689999999999999999998874 321 46899999999999999 6789
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||+..+..+|+.|.+|+.|+++.|..... .|.. . +.....|+|+||++++++.++++|+
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~-~-------------~~~~~~G~~aey~~v~~~~~~~~P~ 142 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF--FGSA-M-------------YFPHVDGGFTRYKVVDTAQCIPYPE 142 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce--eecc-c-------------ccCCCCCceeeeEEechHHeEECCC
Confidence 9999999999999999999999999999987543 1211 0 0001136999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++++. ..++++||+++ +.....+|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++++++
T Consensus 143 ~l~~~~aa~-~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~ 220 (343)
T PRK09880 143 KADEKVMAF-AEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN 220 (343)
T ss_pred CCCHHHHHh-hcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEec
Confidence 999987664 45778999998 4556678999999999999999999999999977999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
++ +.++.+.. +. .+++|+||||+|++..+..++++++++ |+++.+|.......+++. ..+.+++++.++...
T Consensus 221 ~~--~~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~k~~~i~g~~~~-- 292 (343)
T PRK09880 221 PQ--NDDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPPEFPMM-TLIVKEISLKGSFRF-- 292 (343)
T ss_pred CC--cccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHHhCCcEEEEEeec--
Confidence 86 33443322 21 236999999999877889999999997 999999975443333322 122568888887642
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.++++++++++.++++++.++++++|+++++++|++.+++++.. |++|.+
T Consensus 293 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 --TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred --cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 35799999999999998888889999999999999999888765 999864
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-50 Score=372.27 Aligned_cols=311 Identities=27% Similarity=0.363 Sum_probs=262.9
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+.+.| +++++.|.|.|+++||+|||++++||+.|.....|.. ++|.++|.|++|+|+++|+.|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999999987 8899999999999999999999999999999998853 4899999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||+... ..| ..|+|+||+.+|++.++++|+++
T Consensus 81 ~GdrV~~~~-~~~--------------------------------------------~~G~~AEy~~v~a~~~~~~P~~l 115 (326)
T COG0604 81 VGDRVAALG-GVG--------------------------------------------RDGGYAEYVVVPADWLVPLPDGL 115 (326)
T ss_pred CCCEEEEcc-CCC--------------------------------------------CCCcceeEEEecHHHceeCCCCC
Confidence 999998873 100 12699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
|+++||++++++.|||++|....++++|++|||+|+ |++|++++||||++|+ .++++++++++.++++++|++++++|
T Consensus 116 s~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y 194 (326)
T COG0604 116 SFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194 (326)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 999999999999999999999899999999999987 9999999999999998 67777777888889999999999999
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (378)
+ +.+|.+.+++++++ ++|+|||++|+ +.+..++++++++ |+++.+|...+.....++...+ .+.++..+.....
T Consensus 195 ~--~~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 270 (326)
T COG0604 195 R--EEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGS 270 (326)
T ss_pred C--cccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEeccee
Confidence 8 66799999999999 99999999998 6888899999998 9999999887422333332222 3466666665543
Q ss_pred C---CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHH--HHHhhcCcee-EEEEeC
Q 017052 324 W---KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQA--FNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A--~~~l~~~~~~-kvvi~~ 376 (378)
. ...+.+.++.+++.++.+++. ++++||+++..++ +..++ ++.. |+||++
T Consensus 271 ~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~-~~~~GKvvl~~ 326 (326)
T COG0604 271 RDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLE-RRTTGKVVLKV 326 (326)
T ss_pred cchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcc-cCCcceEEEeC
Confidence 2 112456779999999997776 7789999995444 44444 4555 999874
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-49 Score=377.58 Aligned_cols=343 Identities=23% Similarity=0.347 Sum_probs=272.9
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCC-------CCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCC
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQ-------PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v 82 (378)
.|||+++.++++ +++++++.|.|+ +|||||||+++|||++|++.+.|.. .+|.++|||++|+|+++|++|
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCCCCCccccceeEEEEEEEcCcc
Confidence 589999998885 999999999874 6899999999999999999998854 568999999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccc----cccccCCCcccccccCCcccccccccceeeEEEEeCC-
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 157 (378)
.+|++||||++.+..+|+.|..|++|+++.|....... .|.. ..| ...|+|+||+++|+.
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~-~~~--------------~~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYV-DMG--------------GWVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccc-ccC--------------CCCCceEEEEEechhh
Confidence 99999999999999999999999999999999753210 1111 000 013699999999964
Q ss_pred -ceeeCCCCCCh----hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 158 -CAVKVSSIAPL----EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 158 -~~~~iP~~l~~----~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
.++++|++++. ++++.+.+.+.++|+++ .+.++++|++|||.|+|++|++++|+|+.+|++.+++++++++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998754 35677788899999987 5678999999999888999999999999999965677778899999
Q ss_pred HHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCCh--------------HHHHHHHHHhccCCccEEEeccC
Q 017052 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT--------------GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 233 ~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+++++|++. +++.. ..++.+.+.+++.+ ++|++||++|.+ ..+..++++++++ |+++.+|.+
T Consensus 225 ~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~ 301 (393)
T TIGR02819 225 QARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLY 301 (393)
T ss_pred HHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeec
Confidence 999999975 44431 34566778887776 899999999985 4799999999997 999999986
Q ss_pred CCCCeee-----------ccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCccee-eeeccccHHHHHHHh
Q 017052 298 KLKPEVA-----------AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFIT-HNLLFEDINQAFNLM 364 (378)
Q Consensus 298 ~~~~~~~-----------~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~i~~A~~~l 364 (378)
....... +.... ..++.++.+.. ....+.+.++++++.++++++..+++ ++|+|+++++||+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~ 378 (393)
T TIGR02819 302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEF 378 (393)
T ss_pred CCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHH
Confidence 3211111 11111 12234444421 11112346899999999999887776 789999999999999
Q ss_pred hcCceeEEEEeCC
Q 017052 365 KEGKCLRSVIHMP 377 (378)
Q Consensus 365 ~~~~~~kvvi~~~ 377 (378)
.++...|++|.+.
T Consensus 379 ~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 379 DAGAAKKFVIDPH 391 (393)
T ss_pred hhCCceEEEEeCC
Confidence 9887779999874
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-49 Score=369.52 Aligned_cols=337 Identities=24% Similarity=0.368 Sum_probs=281.5
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCccccccc-c-cCCCCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAW-E-TQAIFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~-~-g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++++++. +++++.+.|.| +++||+|||.++++|++|+..+ . +...+|.++|||++|+|+++|+++.+|++||
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd 79 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGD 79 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 79999999875 99999999997 5999999999999999998753 2 2125688999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.+..+|+.|.+|..|.++.|..... .|.. ..|+|+||+.+|++.++++|++++++
T Consensus 80 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-------------------~~G~~aey~~v~~~~~~~lP~~~s~~ 138 (347)
T PRK10309 80 AVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSR-------------------RDGGNAEYIVVKRKNLFALPTDMPIE 138 (347)
T ss_pred EEEECCCcCCCCCcchhCcCcccCCCcce--eccC-------------------CCCccceeEEeehHHeEECcCCCCHH
Confidence 99999999999999999999999976432 1211 13699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+. .+.++|+++ +...+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|++++++++ .
T Consensus 139 ~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~--~ 214 (347)
T PRK10309 139 DGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSR--E 214 (347)
T ss_pred Hhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCc--c
Confidence 998874 456688875 677889999999999999999999999999995588999999999999999999998876 3
Q ss_pred chHHHHHHHHhCC-Ccc-EEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecc-c-cccccccEEEEeeeccCC
Q 017052 250 EPVQQVIKRITDG-GAD-YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 250 ~~~~~~i~~~~~~-~~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~ 325 (378)
.+ .+.+.+++.+ ++| ++|||+|+...+..++++++++ |+++.+|.......++.. . ..+.+++++.|++.....
T Consensus 215 ~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 292 (347)
T PRK10309 215 MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSS 292 (347)
T ss_pred cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccC
Confidence 33 4456666666 888 9999999877889999999997 999999976542222211 1 223468899988764321
Q ss_pred --cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 326 --PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 326 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
..++++++++++.++.+++.++++++|+|+++++|++.+.+++.. |++++++
T Consensus 293 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 293 PWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred CcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 135788999999999998888899999999999999999988765 9999874
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-49 Score=371.91 Aligned_cols=346 Identities=22% Similarity=0.335 Sum_probs=281.4
Q ss_pred CCcccccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEE
Q 017052 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVES 77 (378)
Q Consensus 1 m~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~ 77 (378)
|..|+.+--|+.++++.+.+.++.+++.+.+.|.|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence 6777777788889999998887779999999999999999999999999999999887753 4588999999999999
Q ss_pred eCCCCCcCCCCCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeC
Q 017052 78 VGPGVTEFNEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (378)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 156 (378)
+|+++.+|++||+|++.+ ..+|+.|.+|++|+++.|........+.. .+|. ...|+|+||+++|+
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g~-------------~~~G~~aey~~v~~ 146 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIG-HDGT-------------KNYGGYSDMIVVDQ 146 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccc-cCCC-------------cCCCccceEEEEch
Confidence 999999999999998654 45799999999999999987543211000 0010 01369999999999
Q ss_pred CceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHH
Q 017052 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAK 235 (378)
Q Consensus 157 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~-~~~l~ 235 (378)
+.++++|++++++++|.+++...|+|+++.+...+++|++|||.|+|++|++++|+|+.+|+ ++++++.++++ .+.++
T Consensus 147 ~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~ 225 (360)
T PLN02586 147 HFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAIN 225 (360)
T ss_pred HHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHH
Confidence 99999999999999999999999999998666667899999999999999999999999999 77777666555 56778
Q ss_pred hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-cccc
Q 017052 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGR 314 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 314 (378)
++|+++++++. +. +.+.+.++ ++|++||++|.+..+..++++++++ |+++.+|....... ++...+ .++.
T Consensus 226 ~~Ga~~vi~~~--~~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~--~~~~~~~~~~~ 296 (360)
T PLN02586 226 RLGADSFLVST--DP---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKPLE--LPIFPLVLGRK 296 (360)
T ss_pred hCCCcEEEcCC--CH---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCCCc--cCHHHHHhCCe
Confidence 89999998765 22 23444443 6999999999877888999999997 99999997643223 333322 3466
Q ss_pred EEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 315 TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 315 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.++..+. ..+++++++++.++++++. + ++|+|+++++||+.+++++.. |++|++
T Consensus 297 ~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 297 LVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 666665432 3468999999999998764 4 589999999999999998876 999976
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-48 Score=364.39 Aligned_cols=340 Identities=29% Similarity=0.398 Sum_probs=277.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCc-ccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR-IFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~-~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|++++++.++...++++.+.|.+.|+||+|||.++|||+||++.+.+.. ..|. ++|||++|+|+++| .+..|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 6788888777645577777777899999999999999999999999965 3444 89999999999999 77789999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceee-CCCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK-VSSIAP 167 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~-iP~~l~ 167 (378)
|||.+.+..+|+.|.+|+.|.++.|.+... .|.....+ ...|+|+||+.+|.++.++ +|+++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~--~g~~~~~~--------------~~~G~~aEyv~vp~~~~~~~~pd~~- 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGF--YGYAGLGG--------------GIDGGFAEYVRVPADFNLAKLPDGI- 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccc--cccccccC--------------CCCCceEEEEEeccccCeecCCCCC-
Confidence 999999999999999999999999995432 22220000 0136999999999755555 58998
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~ 246 (378)
..+++++..+++++|++.......+++.+|+|+|+|++|++++++|+.+|+.+|++++.+++|++++++ ++++.+++..
T Consensus 143 ~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~ 222 (350)
T COG1063 143 DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPS 222 (350)
T ss_pred ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCc
Confidence 566666667999998774455556666699999999999999999999999999999999999999999 6666666654
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEeeeccC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~ 324 (378)
..+....+.+.+.+ ++|++|||+|.+..+..++++++++ |+++.+|....... .+.. ..+.+++++.|+....
T Consensus 223 --~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~~- 297 (350)
T COG1063 223 --EDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRPS- 297 (350)
T ss_pred --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCCC-
Confidence 22677788888888 9999999999988899999999997 99999999876442 2322 3335799999884311
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEEeC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~ 376 (378)
...+++.+++++.+|++++..++++.++++++++|++.+.+... .|++|++
T Consensus 298 -~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 298 -GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred -CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 23579999999999999999999999999999999999988554 4999864
|
|
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-47 Score=361.49 Aligned_cols=366 Identities=49% Similarity=0.888 Sum_probs=297.4
Q ss_pred ccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
..+|||.++..+++++++++.|.|++.++||+|||+++|+|++|++.+.|.. .+|.++|||++|+|+++|+++..|++
T Consensus 5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~ 84 (373)
T cd08299 5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVILGHEAAGIVESVGEGVTTVKP 84 (373)
T ss_pred cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCCCCCccccccceEEEEEeCCCCccCCC
Confidence 3569999999998889999999999999999999999999999999988754 56789999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|+..+..+|+.|.+|++++++.|+...... .|.. ..++.+.+..|.+..+..+.|+|+||++++.+.++++|+++
T Consensus 85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 999999888999999999999999998753210 1111 11111222222222222235799999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++++.+||+++.....+++|++|||+|+|++|++++++|+.+|+++|+++++++++.+.++++|++++++..
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~ 243 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ 243 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence 99999999999999999987888999999999998899999999999999986799999999999999999999998875
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
+...++.+.+.+++.+++|+++||+|++..+..++..+.+.+|+++.+|.......+.+.+..+.++.++.++..+.+..
T Consensus 244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
T cd08299 244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS 323 (373)
T ss_pred ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCcc
Confidence 32234667777776668999999999767777777765432499999997654334555554445677888887766544
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
..++.++++.+.++.+++.+++.+.|+++++++|++.+++++..|+++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 45677888888888777777788999999999999999988777988864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-48 Score=327.13 Aligned_cols=314 Identities=23% Similarity=0.266 Sum_probs=273.1
Q ss_pred ccccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCC
Q 017052 8 PQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v 82 (378)
..|+..|-+++++.|.+ +++.+.|.|+|+|+|++||-.|+|+|..|.-...|.+ +.|++||.|.+|+|+.+|+.+
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 45777899999999976 8899999999999999999999999999999888887 678999999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
+++++||||.... ..|.|+|++.+|...++++
T Consensus 84 tdrkvGDrVayl~------------------------------------------------~~g~yaee~~vP~~kv~~v 115 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN------------------------------------------------PFGAYAEEVTVPSVKVFKV 115 (336)
T ss_pred cccccccEEEEec------------------------------------------------cchhhheeccccceeeccC
Confidence 9999999998762 1369999999999999999
Q ss_pred CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 163 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
|+.+++++||++.+.++|||..+++...+++|++|||+.| |++|++++|+++..|+ .+|++.++.+|++.+++.|+++
T Consensus 116 pe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h 194 (336)
T KOG1197|consen 116 PEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEH 194 (336)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999999966 9999999999999999 9999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-CeeeccccccccccEEEEe
Q 017052 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGS 319 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~ 319 (378)
.|+++ .+++.+.+++++++ |+|+++|.+|. +.+...+.+|++. |++|.+|+.+.. .++++.... .+.+++...
T Consensus 195 ~I~y~--~eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~ls-~k~l~lvrp 269 (336)
T KOG1197|consen 195 PIDYS--TEDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQLS-PKALQLVRP 269 (336)
T ss_pred eeecc--chhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCCCeehhhcC-hhhhhhccH
Confidence 99998 88999999999988 99999999998 7899999999997 999999987753 233332222 224443333
Q ss_pred -eeccCCcCCc----HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 320 -LFGGWKPKTD----LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 320 -~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
.+++...+.+ ..+++.++.++.+++. |+++||++++.+|+..+++.... |+++...
T Consensus 270 sl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 270 SLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred hhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 3332222222 3467788889998777 99999999999999999999887 9998754
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-48 Score=362.68 Aligned_cols=331 Identities=23% Similarity=0.332 Sum_probs=262.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++...+.+++++++|.|+|+++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 7899998655449999999999999999999999999999999988754 24679999999999999999 9999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||+..+..+|+.|..|+.|+++.|........|.. ...|+|+||++++++.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~------------------~~~G~~aey~~~~~~~~~~~P~~~ 141 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIK------------------GLHGFMREYFVDDPEYLVKVPPSL 141 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcC------------------CCCccceeEEEeccccEEECCCCC
Confidence 99999999888999999999999999986543212211 013699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHH------hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHhC
Q 017052 167 PLEKICLLSCGLSAGLGAAW------NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT---NPEKCEKAKAF 237 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~------~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~---~~~~~~~l~~~ 237 (378)
+ ++ +.+..++.+++.++. ....+++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|++.++++
T Consensus 142 ~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~ 218 (355)
T cd08230 142 A-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEEL 218 (355)
T ss_pred C-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHc
Confidence 8 43 444445555555432 22336789999999999999999999999999 8999987 68899999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecc-----cccccc
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-----YGLFLS 312 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-----~~~~~~ 312 (378)
|++. +++. +.++.+ .+ ..+++|+||||+|++..+..++++++++ |+++.+|....+..+.+. ...+.+
T Consensus 219 Ga~~-v~~~--~~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k 291 (355)
T cd08230 219 GATY-VNSS--KTPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLG 291 (355)
T ss_pred CCEE-ecCC--ccchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhc
Confidence 9987 4554 233333 21 1248999999999877889999999997 999999987653333333 122356
Q ss_pred ccEEEEeeeccCCcCCcHHHHHHHHHcCCC----CCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 313 GRTLKGSLFGGWKPKTDLPSLVNRYLKKEF----MVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 313 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
++++.|+.... .++++++++++.++.+ .+.++++++|+++++++|++.++++. .|++|++
T Consensus 292 ~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 292 NKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred CcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 88888875432 3578899999988772 25567889999999999999887554 5999875
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=360.42 Aligned_cols=331 Identities=26% Similarity=0.413 Sum_probs=279.0
Q ss_pred EEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC-C---CCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 16 AVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-A---IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 16 ~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
++++++++++++++.|.|.++++||+|||.++++|++|++.+.+. . .+|.++|||++|+|+++|+.+..+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 567788877999999999999999999999999999999876332 2 458899999999999999999877 99999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC------C
Q 017052 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS------I 165 (378)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~------~ 165 (378)
++.+..+|+.|..|+.|+++.|...... |.. ..|+|+||+.+|.+.++++|+ +
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~--g~~-------------------~~G~~ae~~~v~~~~~~~ip~~~~~~~~ 139 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKMP--GND-------------------MQGGFASHIVVPAKGLCVVDEARLAAAG 139 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCcc--CcC-------------------CCCcccceEEechHHeEECCcccccccC
Confidence 9999999999999999999999775432 211 126999999999999999999 8
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++++.+++++.++|+++ ....+++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus 140 ~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~ 217 (349)
T TIGR03201 140 LPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNP 217 (349)
T ss_pred CCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecC
Confidence 99999999999999999998 46789999999999999999999999999999 79999999999999999999999887
Q ss_pred CCC-CchHHHHHHHHhCC-Ccc----EEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEe
Q 017052 246 NDN-NEPVQQVIKRITDG-GAD----YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS 319 (378)
Q Consensus 246 ~~~-~~~~~~~i~~~~~~-~~d----~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 319 (378)
.+. ..++.+.+++++++ ++| +||||+|+...+..++++++++ |+++.+|.......+++.. .+.++.++.+.
T Consensus 218 ~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~~~g~ 295 (349)
T TIGR03201 218 KDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYRLSN-LMAFHARALGN 295 (349)
T ss_pred ccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcccCHHH-HhhcccEEEEE
Confidence 531 13577778888876 776 8999999877888899999997 9999999875433333221 12346777776
Q ss_pred eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 320 LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+... ..+++++++++.++++++.++++ .|+|+++++||+.+++++.. |+++++
T Consensus 296 ~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 296 WGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred ecCC---HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 5422 35789999999999998877764 79999999999999998876 988863
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-47 Score=360.18 Aligned_cols=333 Identities=22% Similarity=0.332 Sum_probs=268.8
Q ss_pred eEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 15 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
+++..+.++++++.+.+.|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++|+++.+|++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 55566665568888999999999999999999999999999988754 458899999999999999999999999999
Q ss_pred Eeeccc-CCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 92 LTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 92 ~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
.+.+.. +|+.|..|++|+++.|........+.. ..| ....|+|+||+.+|++.++++|+++++++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~~ 154 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRS-SDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSDS 154 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccc-cCC-------------CcCCCccccEEEEchHHeEECCCCCCHHH
Confidence 866544 699999999999999997643110000 001 00136999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhCCCcEEeCCCCC
Q 017052 171 ICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-~~~~l~~~g~~~vi~~~~~ 248 (378)
++.+++...|+|+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|++++.+++ +.+.++++|+++++++.
T Consensus 155 aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~-- 231 (375)
T PLN02178 155 GAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTT-- 231 (375)
T ss_pred cchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCc--
Confidence 99999999999998744432 3689999999999999999999999999 7888877654 47888999999998875
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
+. +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|.......+++.. .+.+++++.|+.... .+
T Consensus 232 ~~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~~~~~-~~~~~~~i~g~~~~~---~~ 302 (375)
T PLN02178 232 DS---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKPLDLPIFP-LVLGRKMVGGSQIGG---MK 302 (375)
T ss_pred CH---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCCCccCHHH-HHhCCeEEEEeCccC---HH
Confidence 21 34555443 7999999999876889999999997 9999999764322233222 224688888876543 34
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
++.++++++.+|++++. + ++|||+++++||+.+++++.. |++|++
T Consensus 303 ~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 303 ETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 68999999999998765 4 679999999999999998876 999976
|
|
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=350.48 Aligned_cols=318 Identities=22% Similarity=0.312 Sum_probs=266.1
Q ss_pred eEEeecCCC----CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 15 AAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 15 a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
|+.+.++|. +++++++|.|.|+++||+|||+++|+|++|.+.+.|.+ .+|.++|||++|+|+++|+.+.+|++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 356666663 38899999999999999999999999999999988864 24689999999999999999999999
Q ss_pred CCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|++.+ ..+|..|..|..|+++.|..... .|.. ..|+|+||+.+|++.++++|+++
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-------------------~~G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWD-------------------TDGGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCccc--CCcc-------------------cCCcceeEEEeccccEEECCCCC
Confidence 99998765 45799999999999999987643 2221 13699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++.+.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++..
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999998 56889999999999999999999999999999 799999999999999999999998753
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~ 325 (378)
+ .. .+++|+++++.+.+..+..++++++++ |+++.+|....+. ..+... .+.+++++.++....
T Consensus 218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~-- 282 (329)
T TIGR02822 218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDT-PPLNYQRHLFYERQIRSVTSNT-- 282 (329)
T ss_pred c--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccC-CCCCHHHHhhCCcEEEEeecCC--
Confidence 1 11 126899998888778899999999997 9999999753321 122222 234577887765422
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
+.++.++++++.++++++ ++++|+|+++++|++.+++++.. |+||
T Consensus 283 -~~~~~~~~~l~~~g~i~~---i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 283 -RADAREFLELAAQHGVRV---TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred -HHHHHHHHHHHHhCCCee---EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 346788999999999753 57899999999999999998887 9887
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-46 Score=350.48 Aligned_cols=345 Identities=28% Similarity=0.418 Sum_probs=286.6
Q ss_pred eeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCc------
Q 017052 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE------ 84 (378)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~------ 84 (378)
||+++.++++++++++.+.|.|+++||+|||.++++|++|+....|.. .+|.++|||++|+|+++|+++.+
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 799999999779999999999999999999999999999998887753 46779999999999999999986
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC-ceeeCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVS 163 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~iP 163 (378)
|++||+|+..+..+|+.|..|+.+.++.|.+.... |.....+. ....|+|+||+.++++ +++++|
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~--~~~~~~~~------------~~~~g~~a~~~~v~~~~~~~~lP 147 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY--GHEASCDD------------PHLSGGYAEHIYLPPGTAIVRVP 147 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc--cccccccC------------CCCCcccceEEEecCCCceEECC
Confidence 99999999999999999999999999999876532 22100000 0013699999999986 899999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
++++.++++.+++++.|||+++.+....++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++|++.++
T Consensus 148 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi 227 (361)
T cd08231 148 DNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI 227 (361)
T ss_pred CCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence 99999999999899999999996666667999999998899999999999999997789999999999999999999988
Q ss_pred CCCCC-CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEee
Q 017052 244 NPNDN-NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL 320 (378)
Q Consensus 244 ~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 320 (378)
++++. ..++...+.+++++ ++|++|||+|+...+..++++++++ |+++.+|.........+.+.. +.+++++.++.
T Consensus 228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (361)
T cd08231 228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH 306 (361)
T ss_pred cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcc
Confidence 77531 12234567787776 8999999998867788999999997 999999976533333344322 34588887776
Q ss_pred eccCCcCCcHHHHHHHHHcC--CCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 321 FGGWKPKTDLPSLVNRYLKK--EFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
... .+++.++++++.++ .+.+..+++++|+++++++||+.+++++..|++|++
T Consensus 307 ~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 307 NYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred cCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 432 35788999999988 666777788999999999999999988767999863
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-46 Score=349.44 Aligned_cols=331 Identities=31% Similarity=0.495 Sum_probs=282.9
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--------------CCCcccccceeEEEEEe
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--------------IFPRIFGHEASGIVESV 78 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--------------~~p~~~G~e~~G~V~~v 78 (378)
|||+++.++++ +++++.+.|+|+++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 79999998775 9999999999999999999999999999987654321 26889999999999999
Q ss_pred CCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCc
Q 017052 79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158 (378)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 158 (378)
|+++..|++||+|+..+..+|+.|.+|..+..+.|..... .|+. . ..|+|+||+.++.+.
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-----------------~~g~~a~~~~~~~~~ 139 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLG-G-----------------GGGGFAEYVVVPAYH 139 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccC-C-----------------CCCceeeEEEechHH
Confidence 9999999999999999999999999999999999976542 1211 0 136999999999999
Q ss_pred eeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 159 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 159 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
++++|+++++++++.+ ..+.|||+++ ..+++++|++|||+|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|
T Consensus 140 ~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~g 217 (351)
T cd08233 140 VHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELG 217 (351)
T ss_pred eEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence 9999999999998876 5778999998 7889999999999998999999999999999977899999999999999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTL 316 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i 316 (378)
++.++++. ..++.+.+++++++ ++|++||++|++..+..++++++++ |+++.+|..... ..+... .+.+++++
T Consensus 218 a~~~i~~~--~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i 292 (351)
T cd08233 218 ATIVLDPT--EVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKTL 292 (351)
T ss_pred CCEEECCC--ccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcEE
Confidence 99999887 56688888888877 7999999999777889999999997 999999986532 233332 23468888
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccH-HHHHHHhhcCce--eEEEE
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI-NQAFNLMKEGKC--LRSVI 374 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i-~~A~~~l~~~~~--~kvvi 374 (378)
.+..... .++++++++++.++.+++.+.++++|+++++ ++|++.+.+++. .|++|
T Consensus 293 ~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 293 TGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred EEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 8876432 3679999999999999877778899999996 799999988875 49887
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=349.15 Aligned_cols=361 Identities=48% Similarity=0.875 Sum_probs=303.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
+||+++.+.++++++++.+.|++++++|+||+.++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++||+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDK 80 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence 4789999988889999999999999999999999999999999887754 45679999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
|+..+..+|+.|.+|+.+.++.|......+ .|.. .+|+..+...|.+.++..+.|+|++|+.++++.++++|++++++
T Consensus 81 Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 81 VIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 999988899999999999999997755332 2322 44555555566555555566899999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+++++.+||+++...+.+++|++|||+|+|++|++++++|+.+|+..++++++++++.+.++++|++++++.++.+
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 239 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccccc
Confidence 99999999999999988888999999999998899999999999999996688888899999999999999988876322
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhc-cCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC-DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
.++.+.+++++++++|++||++|....+..++++++ ++ |+++.+|.........+....+.++.++.|.++..+...+
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 318 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD 318 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence 267777888775589999999987678889999999 86 9999998764223344444444456778877665555456
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
.+.++++++.++.+++.+++.++|+++++++|++.+++++..|++++
T Consensus 319 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 319 SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred HHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 78899999999998876677899999999999999988877787763
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=348.58 Aligned_cols=339 Identities=21% Similarity=0.307 Sum_probs=275.3
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
..++|+++++++.++++++++.|+|+++||+|||.++++|++|++.+.|.. .+|.++|||++|+|+++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 348899999999999999999999999999999999999999999887754 45889999999999999999999999
Q ss_pred CCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|+..+ ..+|+.|..|+.|+++.|....+...+.. ..| ....|+|+||+.+|...++++|+++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~ 153 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG-------------KPTQGGFASAMVVDQKFVVKIPEGM 153 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC-------------ccCCCccccEEEEchHHeEECCCCC
Confidence 99998654 44799999999999999987532110000 001 0113699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~~vi~~ 245 (378)
++++++.+++.+.|||+++......++|++|+|+|+|++|++++|+|+.+|+ +++++++++++.+ .++++|++.++++
T Consensus 154 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~ 232 (357)
T PLN02514 154 APEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVS 232 (357)
T ss_pred CHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecC
Confidence 9999999999999999998665566899999999889999999999999999 7888877776664 4467999888766
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
. +. +.+.+.+ +++|++|||+|....+..++++++++ |+++.+|.......+... ..+.+++++.|+....
T Consensus 233 ~--~~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 233 S--DA---AEMQEAA-DSLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTPLQFVTP-MLMLGRKVITGSFIGS-- 302 (357)
T ss_pred C--Ch---HHHHHhc-CCCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCCCcccHH-HHhhCCcEEEEEecCC--
Confidence 4 21 2344443 37999999999767888999999997 999999976532222222 2235688888887543
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
..+++++++++.+++++ +++ ++|+++++.+||+.+++++.. |++|.+++
T Consensus 303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 24689999999999865 345 689999999999999998886 99998763
|
|
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-45 Score=343.77 Aligned_cols=359 Identities=35% Similarity=0.626 Sum_probs=288.5
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
++|||+++.++++++++++.+.|.+.++||+|||.++++|++|++...|.. .+|.++|+|++|+|+++|+++..|++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPG 80 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCC
Confidence 579999999987789999999999999999999999999999999887754 467899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCccccccc-CCcc-cccccccceeeEEEEeCCceeeCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIK-GKPV-YHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~-~~~~-~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
|+|++.+. +|+.|..|+.++.+.|....... .|.. ++|....... +.+. .+....|+|++|+.++.+.++++|++
T Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 81 DHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99998764 89999999999999998654211 1111 0000000000 0000 00112479999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++++.+++++.|||.++.....+++|++|||+|+|.+|++++|+|+.+|++.++++++++++.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999998888899999999999889999999999999999779999999999999999999999887
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 324 (378)
+ ..++.+.+.++++.++|+++||+|++..+..++++++++ |+++.+|.........+....+ .++.++.++.....
T Consensus 239 ~--~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (365)
T cd08278 239 K--EEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS 315 (365)
T ss_pred C--CcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence 6 456777788877339999999999767889999999997 9999999764322333443333 46788877654333
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
...+.+.++++++.++.+++...+ ..|+++++++|++.+++++..|++|+
T Consensus 316 ~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 316 VPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred ChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 223457889999999988653344 68999999999999998887799885
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-44 Score=336.40 Aligned_cols=339 Identities=25% Similarity=0.337 Sum_probs=280.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +++.+.+.|.+.++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+.+.+|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999885 8999999999999999999999999999998876643 4578999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|++.+..+|+.|..|..|+++.|..... +.++. ....|+|+||+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~-~~~~~-----------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~ 141 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG-GWKFS-----------------NFKDGVFAEYFHVNDADANLAPLPDGLT 141 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC-Ccccc-----------------CCCCcceeEEEEcchhhCceEECCCCCC
Confidence 99998888999999999999999986421 00000 0113699999999974 8999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++++.++..+.|||+++ +.+.+++|++|||+|+|.+|++++|+|+.+|+..++++++++++.+.++++|++++++++
T Consensus 142 ~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~- 219 (351)
T cd08285 142 DEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK- 219 (351)
T ss_pred HHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC-
Confidence 999999999999999996 778899999999998899999999999999996699999999999999999999999886
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc---ccccEEEEeeecc
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---LSGRTLKGSLFGG 323 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~~ 323 (378)
..++.+.+.+++.+ ++|+++|++|++..+..++++++++ |+++.+|.........+....+ ....++.+....
T Consensus 220 -~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 296 (351)
T cd08285 220 -NGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP- 296 (351)
T ss_pred -CCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC-
Confidence 45677778877766 8999999999877889999999997 9999998765433333332121 234455443321
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCc-ceeeeeccccHHHHHHHhhcCce--eEEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDE-FITHNLLFEDINQAFNLMKEGKC--LRSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~ 376 (378)
...+.++++++++.++++++.. .+.+.++++++++|++.+++++. .|++|++
T Consensus 297 -~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 -GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred -CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 1235789999999999988743 34456999999999999998874 4999875
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-44 Score=336.52 Aligned_cols=358 Identities=39% Similarity=0.695 Sum_probs=289.5
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|||+++.+++.++++++++.|.+++++|+||+.++++|+.|...+.|.. .+|.++|+|++|+|+++|+++..|++||+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDH 80 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCCCCCccccccceEEEEEeCCCccccCCCCE
Confidence 7999999998889999999999999999999999999999998887754 45678999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+..+..+|++|.+|++++.+.|+....--.|.. .++..++...|...+.....|+|++|+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 81 VVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEECCCCCCCCChhhcCCCcccCccccccccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 9999999999999999999999986531000000 111111111111222223357999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
++.+++++.+||.++....+++++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|++++++.+ ..
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~--~~ 237 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS--ED 237 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC--Cc
Confidence 9999999999999988888999999999997799999999999999995599999999999999999998888876 45
Q ss_pred hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcCC
Q 017052 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 251 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~ 328 (378)
++...+.+++.+ ++|+++|++++...+...+++++++ |+++.+|.........+....+ ..+..+.++.+......+
T Consensus 238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (363)
T cd08279 238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRR 316 (363)
T ss_pred cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHH
Confidence 677778877755 8999999999767889999999997 9999998655322333333332 246666666543323345
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEE
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 374 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi 374 (378)
.++++++++.++.+++.+.+.++|+++++++|++.+++++..|.||
T Consensus 317 ~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 317 DIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 7889999999999876655678999999999999999887775554
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-45 Score=342.05 Aligned_cols=318 Identities=17% Similarity=0.187 Sum_probs=246.5
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-------CCCcccccceeEEEEEeCCCCCc
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
..++++++++++ +++++.+.|+ +++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|.. .
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 457899998886 9999999995 99999999999999999999998853 35889999999999998864 7
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||++.+..+|+ |+.|. ..+.|...... |.. . .|+|+||+++|+++++++|+
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~vP~ 133 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEII--PENYLPSSRFR--SSG-Y------------------DGFMQDYVFLPPDRLVKLPD 133 (341)
T ss_pred cCCCCEEEECCCCCch-hcccc--hhccCCCccee--Eec-C------------------CCceEEEEEEchHHeEECCC
Confidence 9999999998877787 55664 45667654321 111 1 25999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHh--hcCCCCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
++++++||.+. +++++|+++.. .+.+++|++|||+|+|++|++++|+|+. +|..+|++++++++|++++++++.+.
T Consensus 134 ~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~ 212 (341)
T cd08237 134 NVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETY 212 (341)
T ss_pred CCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCcee
Confidence 99999887554 88899998743 3457899999999999999999999986 66558999999999999998866543
Q ss_pred EeCCCCCCchHHHHHHHHhCC-CccEEEeccCC---hHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEE
Q 017052 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGD---TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTL 316 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i 316 (378)
.++ ++ ..+ ++|+|||++|+ +..+..++++++++ |+++.+|..... ..+... .+.+++++
T Consensus 213 ~~~------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~i 276 (341)
T cd08237 213 LID------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLTL 276 (341)
T ss_pred ehh------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceEE
Confidence 221 11 122 79999999994 45788999999997 999999975432 233322 23568888
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcC---CCCCCcceeeeeccccH---HHHHHHhhcCceeEEEEeCC
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKK---EFMVDEFITHNLLFEDI---NQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~l~~i---~~A~~~l~~~~~~kvvi~~~ 377 (378)
.|+.... .++++++++++.++ ..+++++++++|+++++ .+||+...++...|+||+++
T Consensus 277 ~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 277 VGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 8875432 34689999999998 33577788999998655 44554444443349999875
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=329.47 Aligned_cols=332 Identities=22% Similarity=0.374 Sum_probs=273.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +++++.+.|+|+++|++||+.++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 78999998884 9999999999999999999999999999998887754 3588999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|+..+..+|+.|..|..+.++.|..... .++. ..|+|+||+.++.+.++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~~~~~~~~~ip~~~~~~ 138 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV--LGVH-------------------RDGGFSEYAVVPAKNAHRIPDAIADQ 138 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce--EEEc-------------------cCCcceeeEEechHHeEECcCCCCHH
Confidence 99999999999999999999999975432 1111 12599999999999999999999998
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++ +...+.++|+ +.+..++++|++|+|+|+|++|++++|+|+. +|+..++++++++++.++++++|++++++++
T Consensus 139 ~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~-- 214 (339)
T PRK10083 139 YAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNA-- 214 (339)
T ss_pred HHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCc--
Confidence 876 4567788886 4578899999999999999999999999996 6996788899999999999999999999876
Q ss_pred CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
+.++.+.+.. .+ ++|++||++|++..+..++++++++ |+++.+|.......+... ....+++++.+... ..
T Consensus 215 ~~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~----~~ 286 (339)
T PRK10083 215 QEPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPSEIVQQ-GITGKELSIFSSRL----NA 286 (339)
T ss_pred cccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCceecHH-HHhhcceEEEEEec----Ch
Confidence 4455555543 23 5689999999777889999999997 999999876432222111 11134666665543 13
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCc-e-eEEEEeCCC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-C-LRSVIHMPK 378 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~-~-~kvvi~~~~ 378 (378)
+.+.++++++.++.+++..++.+.|+++++++|++.+++++ . .|+++.+++
T Consensus 287 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 287 NKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 57889999999999887655779999999999999998653 3 499998875
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=338.23 Aligned_cols=328 Identities=18% Similarity=0.225 Sum_probs=260.9
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCccccccc-ccCC---------CCCcccccceeEEEEEeCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA---------IFPRIFGHEASGIVESVGP 80 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~---------~~p~~~G~e~~G~V~~vG~ 80 (378)
|.|||+++++++. +++++.|.|+++++||+|||.++|||++|++.+ .|.. .+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5689999999885 999999999999999999999999999999875 3431 2578999999999999999
Q ss_pred CCC-cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--
Q 017052 81 GVT-EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-- 157 (378)
Q Consensus 81 ~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-- 157 (378)
++. .|++||||++.+...|+.|..|. + .|.. . .|+|+||+++|.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~-~------------------~G~~aey~~v~~~~~ 127 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYT-Y------------------PGGLATYHIIPNEVM 127 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------cccc-C------------------CCcceEEEEecHHhc
Confidence 998 59999999998888888887772 1 1111 1 2599999999987
Q ss_pred --ceeeCCCCCChhhhhhh-chhh-hhhHHHH--------HhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcC--CCeEE
Q 017052 158 --CAVKVSSIAPLEKICLL-SCGL-SAGLGAA--------WNVADISKGSTVVIFGL-GTVGLSVAQGAKARG--ASRII 222 (378)
Q Consensus 158 --~~~~iP~~l~~~~aa~~-~~~~-~ta~~al--------~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g--~~~vi 222 (378)
.++++|+++++++++.+ +.+. .+++.++ .+++++++|++|+|+|+ |++|++++|+|+.+| +.+|+
T Consensus 128 ~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi 207 (410)
T cd08238 128 EQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLV 207 (410)
T ss_pred cCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEE
Confidence 68999999999998865 2111 1233332 24678899999999985 999999999999975 45799
Q ss_pred EEcCChhhHHHHHhC--------CCc-EEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEE
Q 017052 223 GVDTNPEKCEKAKAF--------GVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAV 292 (378)
Q Consensus 223 ~v~~~~~~~~~l~~~--------g~~-~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v 292 (378)
+++++++|++.++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|.+..+..++++++++ |+++
T Consensus 208 ~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v 285 (410)
T cd08238 208 VTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLN 285 (410)
T ss_pred EEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEE
Confidence 999999999999997 666 4666542 24677788888887 8999999999878899999999987 8877
Q ss_pred EeccCC-CCCeeeccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee
Q 017052 293 TLGVPK-LKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL 370 (378)
Q Consensus 293 ~~g~~~-~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~ 370 (378)
.++... .....+++... +.+++++.|+.... ..+++++++++.++++++..+++++|+|+++++|++.+. ++..
T Consensus 286 ~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~ 361 (410)
T cd08238 286 FFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPG 361 (410)
T ss_pred EEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCC
Confidence 664322 21122333322 24688888876432 357899999999999999888999999999999999999 5554
Q ss_pred -EEEEeCC
Q 017052 371 -RSVIHMP 377 (378)
Q Consensus 371 -kvvi~~~ 377 (378)
|++|.++
T Consensus 362 gKvvl~~~ 369 (410)
T cd08238 362 GKKLIYTQ 369 (410)
T ss_pred ceEEEECC
Confidence 9999864
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=329.56 Aligned_cols=333 Identities=27% Similarity=0.379 Sum_probs=278.4
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------------CCCcccccceeEEEEEeCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------------IFPRIFGHEASGIVESVGP 80 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------------~~p~~~G~e~~G~V~~vG~ 80 (378)
|||+++++++. +++++.+.|++++++|+||+.++++|+.|+..+.|.. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 79999998875 9999999999999999999999999999998877642 2467899999999999999
Q ss_pred CCC--cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC-
Q 017052 81 GVT--EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (378)
Q Consensus 81 ~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 157 (378)
.+. .|++||+|+..+..+|+.|..|+.+..+.|.... ..|+. . ...|+|+||+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~-~----------------~~~g~~~~~~~~~~~~ 140 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD--LYGFQ-N----------------NVNGGMAEYMRFPKEA 140 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc--ceeec-c----------------CCCCcceeeEEccccc
Confidence 998 8999999999999999999999999999997542 23331 0 013699999999988
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
.++++|+++++++++.+ .+++++|+++ +.+++++|++|||.|+|.+|++++++|+.+|+..++++++++++.++++++
T Consensus 141 ~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 218 (350)
T cd08256 141 IVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKF 218 (350)
T ss_pred ceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHc
Confidence 67899999999999988 7889999997 788999999999977799999999999999986788999999999999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
|++.+++.+ ..++.+.+.+++++ ++|++||++|++..+..++++++++ |+++.+|.......+++......+++++
T Consensus 219 g~~~v~~~~--~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i 295 (350)
T cd08256 219 GADVVLNPP--EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDV 295 (350)
T ss_pred CCcEEecCC--CcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEE
Confidence 998888875 45677788888777 8999999999766788899999997 9999998654332222222212346677
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.++.... ..+.++++++.++.+++.+++.+.|+++++++|++.+++++.. |+++
T Consensus 296 ~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 296 LGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 6665432 3588899999999988755567899999999999999988765 8774
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=326.94 Aligned_cols=327 Identities=24% Similarity=0.393 Sum_probs=276.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||++++++++++++++.+.|.++++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++.+|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 7999999997679999999999999999999999999999998887743 4577899999999999999999999999
Q ss_pred EEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 90 HVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 90 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
+|++.+ ...|+.|.+|..|.++.|..... .|+. . .|+|+||+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~--~~~~-~------------------~g~~a~~~~v~~~~~~~lp~~~~~ 139 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVT-R------------------DGGYAEYMLAPAEALARIPDDLDA 139 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc--cCcc-c------------------CCcceeEEEEchhheEeCCCCCCH
Confidence 998754 56799999999999999987653 2221 1 259999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++++.+++.+.+||+++. ...++++++|||+|+|.+|++++++|+.+|+ +++++++++++.+.++++|+++++++.
T Consensus 140 ~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~-- 215 (333)
T cd08296 140 AEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTS-- 215 (333)
T ss_pred HHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCC--
Confidence 999999999999999984 4589999999999999999999999999999 899999999999999999999998876
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~ 327 (378)
..++.+.++++ +++|+++|++|.+..+...+++++++ |+++.+|.... .++++.. .+.+++++.++.... .
T Consensus 216 ~~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~ 287 (333)
T cd08296 216 KEDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---A 287 (333)
T ss_pred CccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---H
Confidence 44566666665 37999999997667889999999997 99999987653 2333332 225688888876432 2
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.++..+++++.++.++. .+ +.|+++++.+|++.+++++.. |+||+
T Consensus 288 ~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 288 LDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 46788888888887654 34 689999999999999998886 99874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=327.69 Aligned_cols=330 Identities=28% Similarity=0.427 Sum_probs=281.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.++++++++.+.+.|.+++++|+||+.++++|++|+....|.+ .+|.++|+|++|+|+++|+++..|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 7999999987789999999999999999999999999999998876643 3468899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..+..+|+.|..|..|..+.|......+.+ ..|+|++|+.++.++++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~g~~~~~~~v~~~~~~~~P~~l 139 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIG---------------------TDGGFAEYLLVPSRRLVKLPRGL 139 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCcc---------------------CCCcceeeEEecHHHeEECCCCC
Confidence 999999999899999999999999999988763221 13599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhh-cCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++|+|+.+| . +|+++++++++.+.++++|++++++
T Consensus 140 s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 9999999999999999998665 46889999999999779999999999999 6 8899999999999999999999988
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeecc
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
++ .. +.+.+++++.+ ++|+++|++|+......++++++++ |+++.+|.... ..++... .+.+++++.+.....
T Consensus 219 ~~--~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 292 (340)
T cd05284 219 AS--DD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH-GRLPTSD-LVPTEISVIGSLWGT 292 (340)
T ss_pred CC--cc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-CccCHHH-hhhcceEEEEEeccc
Confidence 86 34 77788888776 8999999999767889999999997 99999987643 2222111 134677777665322
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.+.++++++.++.+++ ..+.|+++++++|++.+++++.. |+++.+
T Consensus 293 ---~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 293 ---RAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ---HHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 356888999999998765 24679999999999999988876 888753
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-43 Score=326.44 Aligned_cols=300 Identities=21% Similarity=0.280 Sum_probs=237.8
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecC-cccccccccCC------CCCcccccceeEEEEEeCCCCCc
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLC-RSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
+|||+++.+++. +++++.+.|+|+++||+|||+++||| ++|++.+.|.+ .+|.++|||++|+|+++|+++ .
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998775 99999999999999999999999996 79998887754 358899999999999999998 6
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||+.. |..|..|..+ . .|+|+||+++|++.++++|+
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~~-----------------~------------------~G~~aey~~v~~~~~~~ip~ 119 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVRG-----------------L------------------FGGASKRLVTPASRVCRLDP 119 (308)
T ss_pred CCCCCEEEEe----Cccccccccc-----------------c------------------CCcccceEEcCHHHceeCCC
Confidence 9999999873 2233332211 1 25999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+++++. +.++ ...|||+++.+ . ..++++|||+|+|++|++++|+|+.+|++.|++++.++++++.++++ .+++
T Consensus 120 ~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~ 192 (308)
T TIGR01202 120 ALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLD 192 (308)
T ss_pred CCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccC
Confidence 999864 5454 57899999844 3 34688999999999999999999999996677788888777766553 3444
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
++ + . ...++|+||||+|++..+..++++++++ |+++.+|.......+++... +.+++++.++....
T Consensus 193 ~~--~-~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~i~~~~~~~- 258 (308)
T TIGR01202 193 PE--K-D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVPA-FMKEARLRIAAEWQ- 258 (308)
T ss_pred hh--h-c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccchh-hhcceEEEEecccc-
Confidence 42 1 1 1238999999999977889999999997 99999998654323333222 24577887665322
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce-eEEEEe
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC-LRSVIH 375 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~-~kvvi~ 375 (378)
.++++++++++.++++++.++++++|+|+++++|++.+.++.. .|++|+
T Consensus 259 --~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 259 --PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred --hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 3579999999999999988889999999999999998776554 499874
|
|
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=325.70 Aligned_cols=338 Identities=30% Similarity=0.417 Sum_probs=280.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.+++. +.+.+.+.|.| .+++|+|||.++++|++|++.+.|.. .+|.++|+|++|+|+++|++++++++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999998876 89999999999 99999999999999999998887754 457899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 166 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l 166 (378)
|+|+..+..+|+.|.+|++|+...|+......++- ....|+|++|+.++.+ +++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~g~~~~~~~v~~~~~~~~~lP~~~ 141 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG------------------NRIDGGQAEYVRVPYADMNLAKIPDGL 141 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc------------------cCCCCeeeEEEEecchhCeEEECCCCC
Confidence 99999999999999999999999998754321100 0123699999999987 999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+++.+.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|...++++++++++.+.++++|++.+++++
T Consensus 142 ~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~ 220 (347)
T cd05278 142 PDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220 (347)
T ss_pred CHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCC
Confidence 9999999999999999998 778899999999987799999999999999965788888889999999999999998886
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
..++.+.+++++++ ++|++||++|+...+..++++++++ |+++.+|..............+.+++++.+.....
T Consensus 221 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (347)
T cd05278 221 --NGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-- 295 (347)
T ss_pred --cchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc--
Confidence 45677888887776 8999999999766888999999997 99999986543221112222234566666543221
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce-e-EEEEeC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC-L-RSVIHM 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~-~-kvvi~~ 376 (378)
.+.+.++++++.++.+.+...+...++++++++|++.+..++. . |++++.
T Consensus 296 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 296 -RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 3568889999999998765545688999999999999988776 4 888763
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=328.68 Aligned_cols=351 Identities=28% Similarity=0.384 Sum_probs=281.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.++++ +++.+.+.|.| ++++|+||+.++++|++|+..+.|.. ++|.++|||++|+|+++|+++.++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999998764 99999999988 49999999999999999999988865 357899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccc--cccccCCCcccccccCCc-ccccccccceeeEEEEeCC--ceeeCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER--RGVMHSDQQTRFSIKGKP-VYHYCAVSSFSEYTVVHSG--CAVKVS 163 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~--~g~~~~~g~~~~~~~~~~-~~~~~~~g~~a~~~~v~~~--~~~~iP 163 (378)
|+|+..+..+|+.|.+|..+.++.|....... .++ .|....+..|-. .. ....|+|+||++++.+ .++++|
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lp 155 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKL---YGHAGAGIFGYSHLT-GGYAGGQAEYVRVPFADVGPFKIP 155 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccc---ccccccccccccccc-CCCCCeeEEEEEcccccCeEEECC
Confidence 99999988899999999999999998765421 000 000000000000 00 0013699999999988 899999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
+++++++++.++..++|||+++ +..++++|++|||+|+|.+|++++++|+..|+.+++++++++++.+.+++++...++
T Consensus 156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi 234 (386)
T cd08283 156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI 234 (386)
T ss_pred CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence 9999999999999999999998 888999999999998899999999999999985699999999999999998544677
Q ss_pred CCCCCCc-hHHHHHHHHhCC-CccEEEeccCC---------------------hHHHHHHHHHhccCCccEEEeccCCCC
Q 017052 244 NPNDNNE-PVQQVIKRITDG-GADYSFECIGD---------------------TGMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 244 ~~~~~~~-~~~~~i~~~~~~-~~d~vid~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
++. .. ++.+.+.+++.+ ++|++||++|+ ...+..++++++++ |+++.+|.....
T Consensus 235 ~~~--~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~ 311 (386)
T cd08283 235 NFE--EVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT 311 (386)
T ss_pred cCC--cchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC
Confidence 765 33 477888888877 89999999975 24678899999997 999999876542
Q ss_pred Ceeeccc-cccccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEEeC
Q 017052 301 PEVAAHY-GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVIHM 376 (378)
Q Consensus 301 ~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~ 376 (378)
...+.. ..+.+++++.+.... ..+.+.++++++.++++....++.+.|+++++.+|++.+.+++. .|++|+.
T Consensus 312 -~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 312 -VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred -cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 222332 233457777765422 23568889999999998876667789999999999999988763 4999863
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-42 Score=322.13 Aligned_cols=334 Identities=27% Similarity=0.419 Sum_probs=281.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.+++. +++.+.+.|+| .++||+|||+++++|++|+..+.|.+ .+|.++|||++|+|+++|+++..+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 78999999886 99999999986 89999999999999999999887754 347889999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 166 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l 166 (378)
|+|++.+..+|+.|.+|..++++.|....+. .|.. ..|+|++|+.++.+ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------------------~~g~~~~~~~v~~~~~~~~~lp~~~ 139 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNL-------------------IDGTQAEYVRIPHADNSLYKLPEGV 139 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc-cccc-------------------cCCeeeeEEEcccccCceEECCCCC
Confidence 9999998889999999999999888876431 1111 12699999999987 899999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+.++++.+++.+++||.++....++++|++|||.|+|.+|++++|+|+.+|..+++++++++++.+.++++|++.+++++
T Consensus 140 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (345)
T cd08286 140 DEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA 219 (345)
T ss_pred CHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccc
Confidence 99999999999999999877788899999999998899999999999999943889999999999999999999999886
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW 324 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~ 324 (378)
..++.+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|..... ..+.... +.+++++.+....
T Consensus 220 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-- 292 (345)
T cd08286 220 --KGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD-- 292 (345)
T ss_pred --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc--
Confidence 45677778877776 8999999999777888899999997 999999865432 3333333 4467777664322
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcC---ceeEEEEeC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG---KCLRSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~---~~~kvvi~~ 376 (378)
.+.+.++++++.++.+++.+++.++|+++++++|++.+.+. ...|++|++
T Consensus 293 --~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 --TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred --hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 14578899999999988766677999999999999999876 345999974
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-42 Score=321.48 Aligned_cols=335 Identities=27% Similarity=0.420 Sum_probs=284.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++.++++++.+.|.+.+++|+||+.++++|++|+..+.|.. .+|.++|+|++|+|+++|+.+..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 7999999998889999999999999999999999999999998887754 3377899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|+..+..+|+.|.+|..|..+.|..... .|+. ..|+|++|+.++.. +++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~~iP~~~~ 139 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFT-------------------HPGSFAEYVAVPRADVNLVRLPDDVD 139 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc--cccC-------------------CCCcceeEEEcccccCceEECCCCCC
Confidence 99987788999999999999999998643 2221 12599999999975 9999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++++.++..+.|||+++.+.+++.++++|+|+|+|.+|++++|+|+..|+ .++++++++++.+.++++|++.+++++
T Consensus 140 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~- 217 (345)
T cd08260 140 FVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS- 217 (345)
T ss_pred HHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc-
Confidence 999999999999999998778889999999999999999999999999999 899999999999999999999999886
Q ss_pred CC-chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe-eecccccc-ccccEEEEeeeccC
Q 017052 248 NN-EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLF-LSGRTLKGSLFGGW 324 (378)
Q Consensus 248 ~~-~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~~ 324 (378)
. .++.+.+.++..+++|++|||+|+...+...+++++++ |+++.+|....... ..+....+ .+++++.+....
T Consensus 218 -~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (345)
T cd08260 218 -EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-- 293 (345)
T ss_pred -cchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence 4 56777777776668999999999767788999999997 99999987654322 23332222 456777665432
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
..+.++++++++.++.+.+...+.+.++++++++|++.+++++.. |+|++
T Consensus 294 -~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 -PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 235688899999999987655567899999999999999988776 88764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=321.11 Aligned_cols=334 Identities=25% Similarity=0.373 Sum_probs=281.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---------------CCCcccccceeEEEEE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---------------IFPRIFGHEASGIVES 77 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---------------~~p~~~G~e~~G~V~~ 77 (378)
|||+++..++.++++.+.+.|+++++||+||+.++++|++|+..+.|.+ .+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 7999999999889999999999999999999999999999998876632 2357899999999999
Q ss_pred eCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC
Q 017052 78 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 157 (378)
+|+++.++++||+|++.+...|+.|..|.++..+.|...... |.. ..|+|++|+.++.+
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~ 139 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIF-------------------QDGGYAEYVIVPHS 139 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eee-------------------ccCcceeeEEecHH
Confidence 999999999999999999999999999999999999775321 111 13699999999999
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
.++++|+++++++++.+.+.+.|||+++.+...++++++|||+|+|.+|++++|+|+.+|++.|+++++++++.+.++++
T Consensus 140 ~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 219 (350)
T cd08240 140 RYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219 (350)
T ss_pred HeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 99999999999999999999999999987666667899999998899999999999999997788998999999999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEE
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 317 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 317 (378)
|++.+++.+ +..+.+.+.++..+++|++||++|....+..++++++++ |+++.+|........+..... +++.++.
T Consensus 220 g~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~i~ 295 (350)
T cd08240 220 GADVVVNGS--DPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLLP-LRALTIQ 295 (350)
T ss_pred CCcEEecCC--CccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHHh-hcCcEEE
Confidence 998888775 445666677766558999999999767889999999997 999999876543333333333 3677777
Q ss_pred EeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 318 GSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+..... .+++.++++++.++.++.. +...|+++++++|++.+.+++.. |+++++
T Consensus 296 ~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 296 GSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred EcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 665433 2568889999999987654 45789999999999999888776 988753
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=320.08 Aligned_cols=336 Identities=26% Similarity=0.391 Sum_probs=268.9
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
..|+++++..+. .+++++.+.|.+.++||+|||+++++|++|++.+.+.. .+|.++|||++|+|+++|+++..
T Consensus 16 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 345556666655 49999999998999999999999999999998876521 35778999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||+|++.+..+|+.|..|+.|.++.|..... .+.. +..|+|+||+.++.+.++++|+
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~--~~~~------------------~~~g~~~~y~~v~~~~~~~~P~ 154 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF--FATP------------------PVHGSLANQVVHPADLCFKLPE 154 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc--cCCC------------------CCCCcccceEEcchHHeEECCC
Confidence 9999999999999999999999999999986421 1100 0136999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++++.. ..+.++|+++ +..++.+|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.+++
T Consensus 155 ~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~ 232 (364)
T PLN02702 155 NVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVL 232 (364)
T ss_pred CCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEe
Confidence 9999998763 2455688877 7888999999999988999999999999999966888989999999999999999877
Q ss_pred CCCCCchHHHHHHHH---hCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeee
Q 017052 245 PNDNNEPVQQVIKRI---TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
++....++.+.+.++ ..+++|++||++|++..+..++++++++ |+++.+|.......+... ....+++++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~ 310 (364)
T PLN02702 233 VSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNEMTVPLT-PAAAREVDVVGVFR 310 (364)
T ss_pred cCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCcccHH-HHHhCccEEEEecc
Confidence 642234566666554 2338999999999767889999999997 999999875432111111 22345778877653
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeecc--ccHHHHHHHhhcCcee-EEEEe
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLF--EDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
. ...+..+++++.++.+.+.+.+.++|++ +++++|++.+++++.. |++|.
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 Y----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred C----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2 2467889999999998765567788665 7999999999888765 99985
|
|
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=324.20 Aligned_cols=338 Identities=20% Similarity=0.251 Sum_probs=275.5
Q ss_pred cccceeeEEeec--CCC---CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------------CCC-cccccc
Q 017052 9 QVITCKAAVAWG--AGQ---PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------------IFP-RIFGHE 70 (378)
Q Consensus 9 ~~~~~~a~~~~~--~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------------~~p-~~~G~e 70 (378)
.|.+|||+++.. .+. .+++++.+.|.++++||+|||.++++|++|++.+.|.. ..| .++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 678899999863 332 27888999999999999999999999999988776531 113 478999
Q ss_pred eeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceee
Q 017052 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (378)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 150 (378)
++|+|+++|++++.|++||+|++.+...|+.|..|..+..+.|..... .|.. ...|+|++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~------------------~~~g~~a~ 148 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYE------------------TNYGSFAQ 148 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--cccc------------------CCCCccee
Confidence 999999999999999999999999999999999999999999976543 2221 01369999
Q ss_pred EEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhh--cCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 151 ~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~--~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
|+.++...++++|+++++++++.+++.+.|||+++... +++++|++|||+|+ |.+|++++++|+.+|+ ++++++++
T Consensus 149 y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s 227 (393)
T cd08246 149 FALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSS 227 (393)
T ss_pred EEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCC
Confidence 99999999999999999999999999999999998654 68899999999997 9999999999999999 77888899
Q ss_pred hhhHHHHHhCCCcEEeCCCCC--------------------CchHHHHHHHHhCC--CccEEEeccCChHHHHHHHHHhc
Q 017052 228 PEKCEKAKAFGVTEFLNPNDN--------------------NEPVQQVIKRITDG--GADYSFECIGDTGMITTALQSCC 285 (378)
Q Consensus 228 ~~~~~~l~~~g~~~vi~~~~~--------------------~~~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~~l~ 285 (378)
+++.+.++++|+++++++++. ...+.+.+.+++++ ++|++||++|+ ..+..++++++
T Consensus 228 ~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~ 306 (393)
T cd08246 228 EEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCD 306 (393)
T ss_pred HHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhc
Confidence 999999999999998886421 11356677888776 69999999997 67888999999
Q ss_pred cCCccEEEeccCCCC-CeeeccccccccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHh
Q 017052 286 DGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364 (378)
Q Consensus 286 ~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l 364 (378)
++ |+++.+|..... ..+++.. .+.++.++.+.+... .+.+.++++++.++.+.+ .+.++|+++++++|++.+
T Consensus 307 ~~-G~~v~~g~~~~~~~~~~~~~-l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~ 379 (393)
T cd08246 307 RG-GMVVICAGTTGYNHTYDNRY-LWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLM 379 (393)
T ss_pred cC-CEEEEEcccCCCCCCCcHHH-HhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHH
Confidence 97 999999865432 1222222 224466776665433 246888999999998764 367899999999999999
Q ss_pred hcC-cee-EEEEe
Q 017052 365 KEG-KCL-RSVIH 375 (378)
Q Consensus 365 ~~~-~~~-kvvi~ 375 (378)
.++ +.. |+++-
T Consensus 380 ~~~~~~~gkvvv~ 392 (393)
T cd08246 380 HRNQHHVGNMAVL 392 (393)
T ss_pred HhCccccceEEEe
Confidence 988 565 88764
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-41 Score=319.90 Aligned_cols=356 Identities=33% Similarity=0.520 Sum_probs=285.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCc---CCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE---FNE 87 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~---~~~ 87 (378)
|||+++.+++.++++.+.++|.++++||+||+.++++|++|+....+.. .+|.++|||++|+|+.+|+.+.. |++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~ 80 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSV 80 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCCCCCcccccccceEEEEeCCCCCCCCcCCC
Confidence 7899999998779999999999999999999999999999999887754 45778999999999999999888 999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCccccccccc-c-cccCCC-cccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR-G-VMHSDQ-QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~-g-~~~~~g-~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
||+|++.+..+|+.|.+|..+..+.|.......+ + .. ..| +..+...+.+.+. ...|+|++|+.++.+.++++|+
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 81 GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL-YDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccc-cCCcccccccCCCcccc-ccCCcceeEEEechhhEEECCC
Confidence 9999998888999999999999999997641100 0 00 000 0000000000000 1236999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++++.++..+.|||+++.+...++++++|||+|+|.+|++++++|+.+|+..++++++++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999877788899999999988999999999999999944999989999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 322 (378)
.+ ..++.+.+++...+ ++|++||++++.+....++++++++ |+++.+|.........+....+ .++.++.++...
T Consensus 239 ~~--~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 239 AA--KEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred CC--cccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 76 45677778877766 8999999999854788999999997 9999998664322223333333 457777664321
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
...+.+.++++++.++.+.+...+.+.++++++.+|++.+++++.. |+||+
T Consensus 316 --~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 --RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred --CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1234688899999999987765567889999999999999988876 88874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-42 Score=318.09 Aligned_cols=306 Identities=20% Similarity=0.250 Sum_probs=251.1
Q ss_pred eeeEEeecCCCC-----eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC
Q 017052 13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 13 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
|||+++.++++| +++.+.+.|.|+++||+||+.++++|++|+..+.|.+ .+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 789999998854 7888899999999999999999999999999887754 3578999999999999999998
Q ss_pred c-CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 84 E-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 84 ~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
+ |++||+|++... . .|+|+||+.+|++.++++
T Consensus 81 ~~~~vGd~V~~~~~-----------------------------~------------------~g~~a~~~~v~~~~~~~i 113 (324)
T cd08291 81 AQSLIGKRVAFLAG-----------------------------S------------------YGTYAEYAVADAQQCLPL 113 (324)
T ss_pred ccCCCCCEEEecCC-----------------------------C------------------CCcchheeeecHHHeEEC
Confidence 6 999999987520 0 158999999999999999
Q ss_pred CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE-cc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc
Q 017052 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240 (378)
Q Consensus 163 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~-Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~ 240 (378)
|+++++++++++++...|||.++ +.... ++++++|+ |+ |++|++++|+|+.+|+ +++++++++++.+.++++|++
T Consensus 114 P~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~ 190 (324)
T cd08291 114 PDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAE 190 (324)
T ss_pred CCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCc
Confidence 99999999998888899998544 55555 56666665 55 9999999999999999 899999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEE
Q 017052 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKG 318 (378)
Q Consensus 241 ~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g 318 (378)
++++++ ..++.+.+++++.+ ++|++||++|+. .....+.+++++ |+++.+|.........++. ..+.+++++.+
T Consensus 191 ~~i~~~--~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08291 191 YVLNSS--DPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEG 266 (324)
T ss_pred EEEECC--CccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEE
Confidence 999886 56788888888877 899999999984 567789999997 9999998764432211222 22356888888
Q ss_pred eeeccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 319 SLFGGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 319 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
+....+.. .+.++++++++. +.+ ++.++++|+++|+++|++.+++++.. |++|+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 267 FWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 87654321 235677888887 654 45588999999999999999998775 99874
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-41 Score=314.65 Aligned_cols=334 Identities=25% Similarity=0.358 Sum_probs=272.4
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
||++++.+++..+++.+.+.|.|+++||+||++++++|++|+.++.+.. .+|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 7899999988789999999999999999999999999999998654421 3577899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..+..+|..|..|+.+++++|+.... .+.. ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~iP~~l 139 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG--VGVN-------------------RPGAFAEYLVIPAFNVWKIPDDI 139 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce--eeec-------------------CCCcceeeEEechHHeEECcCCC
Confidence 99999999999999999999999999987532 1111 23699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++++.+ ..+.++++++.. ...+|++|+|.|+|.+|++++|+|+.+|+++++++++++++.+.++++|++++++++
T Consensus 140 ~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~ 216 (341)
T PRK05396 140 PDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA 216 (341)
T ss_pred CHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence 99988754 466667666532 346899999988899999999999999986688888899999999999999999886
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
..++.+.+++++.+ ++|++|||+|+...+..++++++++ |+++.+|.......+.+ ...+++++++.++....
T Consensus 217 --~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~-- 290 (341)
T PRK05396 217 --KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGRE-- 290 (341)
T ss_pred --cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccC--
Confidence 45677788887766 8999999999877889999999997 99999987654333332 22234566776654221
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~ 377 (378)
..+.+..+++++.++ +.+.+.+.+.++++++++|++.+.+++..|++++++
T Consensus 291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 291 MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 123466788888888 545455778999999999999998877449999875
|
|
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=311.59 Aligned_cols=330 Identities=32% Similarity=0.507 Sum_probs=275.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +++.+.+.|.++++|++|||.++++|+.|+....+.. .+|.++|+|++|+|+++|+++..|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 78999998875 9999999999999999999999999999998877654 3477899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|+..+..+|+.|..|..++.+.|.+... .++. ..|+|++|+.++++ ++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~v~v~~~-~~~~p~~~~~~ 137 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV--LGVH-------------------RDGGFAEYIVVPAD-ALLVPEGLSLD 137 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe--eeec-------------------CCCcceeEEEechh-eEECCCCCCHH
Confidence 99998888999999999999999964432 1111 13599999999999 99999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+ ..+.++++++ ....+++|++|||+|+|.+|++++|+|+.+|+ +++++.+++++.+.++++|+++++++. .
T Consensus 138 ~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~--~ 212 (337)
T cd08261 138 QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG--D 212 (337)
T ss_pred Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc--c
Confidence 99877 4678888887 78899999999999889999999999999999 899998999999999999999999887 4
Q ss_pred chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcC
Q 017052 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 250 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (378)
.++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|...... .+....+ ..++++.+... ...
T Consensus 213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~ 286 (337)
T cd08261 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGPV--TFPDPEFHKKELTILGSRN---ATR 286 (337)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCCC--ccCHHHHHhCCCEEEEecc---CCh
Confidence 5677888888776 8999999998877889999999997 9999998664322 2222222 24666665431 223
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCc-ee-EEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-CL-RSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~-~~-kvvi~~ 376 (378)
+.+.++++++.++.+++.+.+...++++++.+|++.+++++ .. |+|+++
T Consensus 287 ~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 287 EDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 46888999999999876333678999999999999999874 54 999874
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=312.28 Aligned_cols=332 Identities=30% Similarity=0.433 Sum_probs=277.1
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +.+++.+.|++.+++|+|||+++++|+.|+..+.|.. ..|.++|+|++|+|+++|+.+..|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999998874 9999999999999999999999999999999887754 4577899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCc-----eeeCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC-----AVKVSS 164 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~iP~ 164 (378)
+|+..+..+|++|.+|..++.+.|....... .. ..|+|++|+.++.+. ++++|+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------------~~g~~~~~v~v~~~~~~~~~~~~lP~ 138 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKFG--NL-------------------YDGGFAEYVRVPAWAVKRGGVLKLPD 138 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcceec--cC-------------------CCCcceeeEEecccccccccEEECCC
Confidence 9999999999999999999999998765421 11 135999999999998 999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++++.+ ..+.+||+++. ..++++|++|||+|+|.+|++++|+|+..|++.++++++++++.+.++++|.+++++
T Consensus 139 ~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~ 216 (343)
T cd08235 139 NVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTID 216 (343)
T ss_pred CCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEec
Confidence 9999999876 68899999984 558999999999988999999999999999933899999999999999999999888
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 322 (378)
++ +.++.+.++++..+ ++|+++||+++...+...+++++++ |+++.+|.........+.... ..++.++.+....
T Consensus 217 ~~--~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 293 (343)
T cd08235 217 AA--EEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA 293 (343)
T ss_pred CC--ccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC
Confidence 76 56777888887777 8999999999766888999999997 999999865443222222221 1345566554432
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
. .+.++++++++.++.+.+.+.+..+|+++++.+|++.+.+++ . |+|++
T Consensus 294 ~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 294 S---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred C---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 2 356888999999998875444678899999999999999888 6 98874
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=310.21 Aligned_cols=318 Identities=25% Similarity=0.327 Sum_probs=263.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCCCEEE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVL 92 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 92 (378)
|||+++.+++ ++++++.+.|+++++||+||++++++|++|.....|....|.++|||++|+|+++|++ +++||+|.
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~ 76 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFPGVPGHEFVGIVEEGPEA---ELVGKRVV 76 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCCCCCccCceEEEEEEEeCCC---CCCCCeEE
Confidence 7899999876 5999999999999999999999999999999988886667889999999999999987 68999999
Q ss_pred eecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhh
Q 017052 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 172 (378)
Q Consensus 93 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa 172 (378)
..+..+|+.|.+|..+.++.|...... ++. ...|+|++|+.++.+.++++|++++.++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa 136 (319)
T cd08242 77 GEINIACGRCEYCRRGLYTHCPNRTVL--GIV------------------DRDGAFAEYLTLPLENLHVVPDLVPDEQAV 136 (319)
T ss_pred ECCCcCCCCChhhhCcCcccCCCCccc--Ccc------------------CCCCceEEEEEechHHeEECcCCCCHHHhh
Confidence 999999999999999999888876532 111 012599999999999999999999999888
Q ss_pred hhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchH
Q 017052 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~ 252 (378)
.+ ....++|.++ +..++++|++|||+|+|.+|++++|+|+.+|+ +++++++++++.+.++++|++.+++++ ..
T Consensus 137 ~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~--~~-- 209 (319)
T cd08242 137 FA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDE--AE-- 209 (319)
T ss_pred hh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcc--cc--
Confidence 64 3455666644 78889999999999889999999999999999 799999999999999999998887764 11
Q ss_pred HHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcHH
Q 017052 253 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP 331 (378)
Q Consensus 253 ~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 331 (378)
+.+ ++|+++||+|+...+..++++++++ |+++..+.......+++.. .+.++.++.+.... .++
T Consensus 210 -------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~------~~~ 274 (319)
T cd08242 210 -------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASFDLTK-AVVNEITLVGSRCG------PFA 274 (319)
T ss_pred -------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCccCHHH-heecceEEEEEecc------cHH
Confidence 233 8999999998867788999999997 9999877654333333222 22456677665432 378
Q ss_pred HHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 332 SLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 332 ~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
++++++.++++++.+.+.+.|+++++++||+.+.++...|++|+.
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 275 PALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred HHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 899999999987666678999999999999999977756999863
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=312.59 Aligned_cols=337 Identities=27% Similarity=0.402 Sum_probs=275.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCC-CCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++ .+++++.++|.|. ++||+||+.++++|+.|+....|.. .+|.++|+|++|+|+++|+++.++++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCCcccccceEEEEEeeCCCccccCCCC
Confidence 7899998775 5999999999985 9999999999999999998887753 3478899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|++.+..+|++|.+|.+++.+.|.....- |. ++ .....|+|++|+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~l~ 142 (344)
T cd08284 80 RVVSPFTIACGECFYCRRGQSGRCAKGGLF--GY---AG------------SPNLDGAQAEYVRVPFADGTLLKLPDGLS 142 (344)
T ss_pred EEEEcccCCCCCChHHhCcCcccCCCCccc--cc---cc------------cCCCCCceeEEEEcccccCceEECCCCCC
Confidence 999999899999999999999999765321 10 00 00013699999999864 9999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++++.++..++|||+++. ...+++|++|||+|+|.+|++++|+|+.+|+.+++++++++++.+.++++|+. .++.+
T Consensus 143 ~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~- 219 (344)
T cd08284 143 DEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFE- 219 (344)
T ss_pred HHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecC-
Confidence 9999999999999999984 57899999999998899999999999999975788888899999999999975 34554
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
..++...+.+++++ ++|++||++|+...+...+++++++ |+++.+|..............+.+++++.+.. ...
T Consensus 220 -~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 294 (344)
T cd08284 220 -DAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGR---CPV 294 (344)
T ss_pred -CcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEec---CCc
Confidence 45677788888776 8999999999877889999999997 99999997653221111222234566665432 112
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEe
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~ 375 (378)
.+.+.++++++.++.+++...+.+.++++++++|++.+++++..|+|++
T Consensus 295 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 295 RSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred chhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 4578899999999998765556788999999999998887655788874
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=311.89 Aligned_cols=333 Identities=29% Similarity=0.442 Sum_probs=274.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+++. +++++.+.|.| +++||+||+.++++|++|+..+.|.. ..|.++|||++|+|+++|+++..+++||
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGD 79 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCCCCCcccccceEEEEEEeCCCCCccCCCC
Confidence 78999998775 99999999986 89999999999999999988887754 3478999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|+.....+|+.|..|..++.+.|..... .|.. ..|+|+||+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~~lP~~l~ 138 (345)
T cd08287 80 FVIAPFAISDGTCPFCRAGFTTSCVHGGF--WGAF-------------------VDGGQGEYVRVPLADGTLVKVPGSPS 138 (345)
T ss_pred EEEeccccCCCCChhhhCcCcccCCCCCc--ccCC-------------------CCCceEEEEEcchhhCceEECCCCCC
Confidence 99886677899999999999988886432 1111 12599999999975 9999999998
Q ss_pred hhhhh-----hhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 168 LEKIC-----LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 168 ~~~aa-----~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++.+. ++...+.+||+++ ..+.+++|++|+|.|+|.+|++++|+|+++|++.++++++++++.+.++++|++.+
T Consensus 139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v 217 (345)
T cd08287 139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI 217 (345)
T ss_pred hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence 83221 2335678999987 57889999999998889999999999999999668999999999999999999999
Q ss_pred eCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEee
Q 017052 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSL 320 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 320 (378)
+++. ...+.+.+.+++++ ++|+++|++|++..+..++++++.+ |+++.+|..... ..+.. ..+.++.++.+..
T Consensus 218 ~~~~--~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 218 VAER--GEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG--VELDVRELFFRNVGLAGGP 292 (345)
T ss_pred ecCC--cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCCC--CccCHHHHHhcceEEEEec
Confidence 9886 45677788887776 8999999998877889999999997 999999876532 23333 3345688887643
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
... .+.+.++++++.++.+.+...+.+.++++++++|++.+++++..|++|+.
T Consensus 293 ~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 293 APV---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred CCc---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 221 34688999999999987755567899999999999999887777999863
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-41 Score=313.10 Aligned_cols=326 Identities=26% Similarity=0.387 Sum_probs=273.4
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.++++++++++.|.|.+.++|++||++++++|++|+....|.. .+|.++|+|++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 7899999999889999999999999999999999999999998877743 4567899999999999999998899999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.+..+|+.|..|..+.++.|...... |.. ..|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~ 139 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY--GEE-------------------LDGFFAEYAKVKVTSLVKVPPNVSDE 139 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccc--ccc-------------------cCceeeeeeecchhceEECCCCCCHH
Confidence 999998899999999999999999886432 211 13699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.+++.+.+||+++... .++++++|||+|+ |.+|++++|+|+.+|+ +++++++++++.+.++++ ++++++.+
T Consensus 140 ~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-- 214 (334)
T PRK13771 140 GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-- 214 (334)
T ss_pred HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch--
Confidence 9999999999999998554 8999999999998 9999999999999999 899999999999999888 66666542
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe--eeccccccccccEEEEeeeccCCc
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--VAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
++.+.++++ +++|+++||+|+ .....++++++++ |+++.+|....... ..+... +.+++++.+.... .
T Consensus 215 --~~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~ 284 (334)
T PRK13771 215 --KFSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHISA---T 284 (334)
T ss_pred --hHHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecCC---C
Confidence 455556654 379999999998 5678999999997 99999997643222 222222 3467777766421 2
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.++++++++++.++.++. .+.+.|+++++++|++.+++++.. |+++..
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 285 KRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 456889999999998754 367889999999999999987766 988864
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=312.63 Aligned_cols=313 Identities=21% Similarity=0.266 Sum_probs=250.9
Q ss_pred cccceeeEEeecCCCC------eEEEEe---ecC-CCCCCcEEEEEeEEecCcccccccccCC---CCCccccc--ceeE
Q 017052 9 QVITCKAAVAWGAGQP------LVVEEV---EVN-PPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGH--EASG 73 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~------~~~~~~---~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~--e~~G 73 (378)
.+.++|.+++-+..+. |++.+. +.| ++++|||||||.++++|+.|+....+.. .+|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 4456788888554421 777663 555 3589999999999999999886443311 35889997 8899
Q ss_pred EEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEE
Q 017052 74 IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTV 153 (378)
Q Consensus 74 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~ 153 (378)
+|+.+|+++.+|++||+|+.. |+|+||++
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------~~~aey~~ 113 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI---------------------------------------------------TGWEEYSL 113 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec---------------------------------------------------CCcEEEEE
Confidence 999999999999999999764 48999999
Q ss_pred EeCCc--ee--eCCCCCChh-hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 154 VHSGC--AV--KVSSIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 154 v~~~~--~~--~iP~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
++... +. ++|++++++ ++|++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++
T Consensus 114 v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~ 192 (348)
T PLN03154 114 IRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS 192 (348)
T ss_pred EeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCC
Confidence 98753 54 459999987 688999999999999988889999999999998 9999999999999999 89999999
Q ss_pred hhhHHHHH-hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC-ee--
Q 017052 228 PEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP-EV-- 303 (378)
Q Consensus 228 ~~~~~~l~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~-- 303 (378)
+++.+.++ ++|+++++++++ ..++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|...... ..
T Consensus 193 ~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~ 269 (348)
T PLN03154 193 SQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQ 269 (348)
T ss_pred HHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCC
Confidence 99999987 799999998852 2367777877766689999999997 6889999999997 9999999765321 10
Q ss_pred -ecc-ccccccccEEEEeeeccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 304 -AAH-YGLFLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 304 -~~~-~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
... ...+.+++++.|+....+.. .+.++++++++.+|++++. ++++|+|+++++|++.+++++.. |+||++.+
T Consensus 270 ~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 270 GIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred CcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 011 12234678888876543211 2357789999999998754 66789999999999999999887 99998753
|
|
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=317.34 Aligned_cols=340 Identities=22% Similarity=0.301 Sum_probs=275.4
Q ss_pred cccceeeEEeec--CCCC---eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-------------CCC-ccccc
Q 017052 9 QVITCKAAVAWG--AGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFP-RIFGH 69 (378)
Q Consensus 9 ~~~~~~a~~~~~--~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-------------~~p-~~~G~ 69 (378)
.|.+|||+++.. .++| +++.+.+.|.|++++++||+.++++|++|.+...+.. ..| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 467899999954 5543 8999999999999999999999999998876654421 123 27999
Q ss_pred ceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCccccccccccee
Q 017052 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFS 149 (378)
Q Consensus 70 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 149 (378)
|++|+|+++|+.+..|++||+|++....+|+.|..|+.|..+.|..... .|..+ ..|+|+
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~------------------~~g~~a 143 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI--WGYET------------------NFGSFA 143 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc--ccccC------------------CCccce
Confidence 9999999999999999999999999999999999999999999965431 22110 136999
Q ss_pred eEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHh--hcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 150 ~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
||+.++.+.++++|+++++++++.+.+.+.+||+++.. ..++.+|++|||+|+ |.+|++++|+|+.+|+ +++++++
T Consensus 144 e~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~ 222 (398)
T TIGR01751 144 EFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVS 222 (398)
T ss_pred EEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcC
Confidence 99999999999999999999999999999999999854 467899999999998 9999999999999999 7888889
Q ss_pred ChhhHHHHHhCCCcEEeCCCCCC--------------------chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhc
Q 017052 227 NPEKCEKAKAFGVTEFLNPNDNN--------------------EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCC 285 (378)
Q Consensus 227 ~~~~~~~l~~~g~~~vi~~~~~~--------------------~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~ 285 (378)
++++.+.++++|++.++++++.+ ..+.+.+.+++.+ ++|++|||+|. ..+..++++++
T Consensus 223 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~ 301 (398)
T TIGR01751 223 SPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCR 301 (398)
T ss_pred CHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhc
Confidence 99999999999999999875310 1355667777776 89999999996 67888999999
Q ss_pred cCCccEEEeccCCCC-CeeeccccccccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHh
Q 017052 286 DGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 364 (378)
Q Consensus 286 ~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l 364 (378)
++ |+++.+|..... ..+++.. .+..+.++.+..+.. .++++++++++.++.+... +.+++++++++++++.+
T Consensus 302 ~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~ 374 (398)
T TIGR01751 302 RG-GMVVICGGTTGYNHDYDNRY-LWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDV 374 (398)
T ss_pred cC-CEEEEEccccCCCCCcCHHH-HhhcccEEEccccCc---HHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHH
Confidence 97 999999876532 1222211 123455666655433 2357889999999987643 67899999999999999
Q ss_pred hcCcee-EEEEeCC
Q 017052 365 KEGKCL-RSVIHMP 377 (378)
Q Consensus 365 ~~~~~~-kvvi~~~ 377 (378)
.+++.. |+++++.
T Consensus 375 ~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 375 HRNHHQGNVAVLVL 388 (398)
T ss_pred HcCCCCceEEEEeC
Confidence 988876 9998753
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=313.07 Aligned_cols=344 Identities=25% Similarity=0.359 Sum_probs=272.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
||++++.+++ +++++++++|.+ +++||+|||+++++|++|++.+.|.. .+|.++|||++|+|+++|+++..+++||
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGD 79 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCCCCCceeccccEEEEEEeCCCCCcCCCCC
Confidence 6899998887 599999999996 79999999999999999999887754 3588999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
+|+..+..+|+.|..|+.+..+.|........| . ..|- +. .....|+|+||+.+|.+ .++++|++++
T Consensus 80 ~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~-~-~~~~--~~-------~~~~~g~~a~y~~v~~~~~~~~~lP~~~~ 148 (375)
T cd08282 80 RVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAG-G-AYGY--VD-------MGPYGGGQAEYLRVPYADFNLLKLPDRDG 148 (375)
T ss_pred EEEEeCCCCCCCCHHHHCcCcccCCCCCccccc-c-cccc--cc-------cCCCCCeeeeEEEeecccCcEEECCCCCC
Confidence 999999999999999999999999764321100 0 0000 00 00013699999999976 8999999999
Q ss_pred hh---hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 168 LE---KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 168 ~~---~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++ +++.+...++|||+++ ..+++++|++|||.|+|.+|++++|+|+++|+.+++++++++++.+.++++|+ ..++
T Consensus 149 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~ 226 (375)
T cd08282 149 AKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPID 226 (375)
T ss_pred hhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEec
Confidence 98 5677888899999998 78899999999998889999999999999997578889999999999999998 4556
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChH-----------HHHHHHHHhccCCccEEEeccCCCCCe-----------
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTG-----------MITTALQSCCDGWGLAVTLGVPKLKPE----------- 302 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~~~----------- 302 (378)
++ +.++.+.+.+++++++|+++||+|+.. .+..++++++++ |+++.+|.......
T Consensus 227 ~~--~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~ 303 (375)
T cd08282 227 FS--DGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGE 303 (375)
T ss_pred cC--cccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCcc
Confidence 65 456777788776668999999998742 478899999997 99998876532110
Q ss_pred eecccccc-ccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 303 VAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 303 ~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
..+....+ .++.++.+... ...+.+.++++++.++.+++...+.++|+++++++|++.+.+++..|+++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 304 LSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 11111111 23444443321 1235688899999999988755578999999999999999988833999863
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=309.31 Aligned_cols=322 Identities=24% Similarity=0.380 Sum_probs=260.9
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC--------------CCCCcccccceeEEEEEe
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------------AIFPRIFGHEASGIVESV 78 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--------------~~~p~~~G~e~~G~V~~v 78 (378)
|||+++..+ ++++++.+.|++++++|+|||.++++|++|+..+.|. ..+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 789999866 6999999999999999999999999999999888762 124778999999999999
Q ss_pred CCCCCc-CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC
Q 017052 79 GPGVTE-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
Q Consensus 79 G~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 157 (378)
|+++.. |++||+|+..+...|+.|..|..|.. . ...|+|+||+.++.+
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~---------------~----------------~~~g~~~~~~~v~~~ 127 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS---------------P----------------EAPGGYAEYMLLSEA 127 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC---------------c----------------CCCCceeeeEEechH
Confidence 999987 99999999999999999999943210 0 013599999999999
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
.++++|+++++++++ ++..+++||+++ ..+++++|++|||+|+|.+|++++|+|+.+|+..++++++++++.+.++++
T Consensus 128 ~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~ 205 (341)
T cd08262 128 LLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAM 205 (341)
T ss_pred HeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHc
Confidence 999999999999887 566888999985 888999999999998899999999999999996688888899999999999
Q ss_pred CCcEEeCCCCCCc--hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccccccc
Q 017052 238 GVTEFLNPNDNNE--PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR 314 (378)
Q Consensus 238 g~~~vi~~~~~~~--~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 314 (378)
|++++++++..+. .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|.......+.. ...+.+++
T Consensus 206 g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~-~~~~~~~~ 282 (341)
T cd08262 206 GADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEP-ALAIRKEL 282 (341)
T ss_pred CCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCH-HHHhhcce
Confidence 9988888753111 222 34444455 8999999998755778899999997 99999987643222211 11124566
Q ss_pred EEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 315 TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 315 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
++.+..... .+.+.++++++.++.+.+.+.+.+.++++++++|++.+++++.. |++++
T Consensus 283 ~~~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 283 TLQFSLGYT---PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred EEEEEeccc---HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 665443221 24688899999999988766677899999999999999988776 98874
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=307.51 Aligned_cols=332 Identities=28% Similarity=0.401 Sum_probs=271.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|||+++.+++....+++.+.|++.++||+|||+++++|++|+..+.|.. ..|.++|||++|+|+++|+++..|++||+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~ 80 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKVGDR 80 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCCCCccCCcccceEEEEECCCCccCCCCCE
Confidence 8999999988754489999999999999999999999999998887753 24678999999999999999999999999
Q ss_pred EEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 91 VLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 91 V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
|++.+ ..+|+.|..|..+..+.|..... .|+. ..|+|+||+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (338)
T PRK09422 81 VSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYT-------------------VDGGMAEQCIVTADYAVKVPEGLDPA 139 (338)
T ss_pred EEEccCCCCCCCChhhcCCCcccCCCccc--cCcc-------------------ccCcceeEEEEchHHeEeCCCCCCHH
Confidence 98754 66799999999999999987653 2221 12599999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.++..+.|||+++ +.+.+++|++|||+|+|++|++++++|+. .|+ +++++++++++.+.++++|++.++++..
T Consensus 140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~- 216 (338)
T PRK09422 140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR- 216 (338)
T ss_pred HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence 9999999999999998 78899999999999999999999999998 499 8999999999999999999998888742
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 328 (378)
..++.+.+++..+ ++|.++++.++...+..++++++.+ |+++.+|.......+... ....+..++.++.... .+
T Consensus 217 ~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~ 290 (338)
T PRK09422 217 VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESMDLSIP-RLVLDGIEVVGSLVGT---RQ 290 (338)
T ss_pred cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCceecHH-HHhhcCcEEEEecCCC---HH
Confidence 2456667777665 6885554445557889999999997 999999865432222211 1223466666554322 34
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
.+..+++++.++.+.. .+ ..++++++++|++.+.+++.. |+++.+.
T Consensus 291 ~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 291 DLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 6888999999998754 34 458999999999999988877 9998764
|
|
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=306.53 Aligned_cols=333 Identities=32% Similarity=0.436 Sum_probs=271.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC------CCCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+++..+.+.+.+.|.|++++++||++++++|+.|+..+.+. ..+|.++|+|++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 789999988867999999999999999999999999999998874331 13567899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..+..+|+.|..|..++++.|+.. ...|.. ..|+|++|++++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------~~g~~~~~v~v~~~~~~~lP~~~ 139 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNT--KILGVD-------------------TDGCFAEYVVVPEENLWKNDKDI 139 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCccc--ceEecc-------------------CCCcceEEEEechHHcEECcCCC
Confidence 999999999999999999999999999763 333322 13599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+++.+ ++...+.++++++. ...++|++|||.|+|.+|++++|+|+.+|..+++++++++++.+.++++|++++++++
T Consensus 140 ~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (341)
T cd05281 140 PPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR 216 (341)
T ss_pred CHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc
Confidence 98554 56667888888764 4567899999988899999999999999985688888899999999999998888775
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
..++. .+.++.++ ++|++||++|+......++++++++ |+++.+|.......+.+....+.+++.+.+.... .
T Consensus 217 --~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 290 (341)
T cd05281 217 --EEDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR--K 290 (341)
T ss_pred --cccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecC--C
Confidence 44566 77777776 8999999998877888999999997 9999998654322222222233456666655421 1
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..+.+.++++++.++.+.+.+.+...++++++++||+.+.+++ . |++++.
T Consensus 291 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 291 MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 1245778999999999876556778899999999999999888 6 998863
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=307.56 Aligned_cols=329 Identities=30% Similarity=0.468 Sum_probs=268.8
Q ss_pred eEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 15 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|++++++. .+.+++.+.|.+.++||+|||.++++|+.|.+.+.+.. .+|.++|+|++|+|+++|+++.+|++|
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 46778885 49999999999999999999999999999987653211 346789999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|+|++.+..+|+.|..|+.|.++.|.+.... +.. ...|+|++|+.++.+.++++|+++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~~ 139 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATP------------------PVDGTLCRYVNHPADFCHKLPDNVSL 139 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccc------------------cCCCceeeeEEecHHHcEECcCCCCH
Confidence 9999999999999999999999999764321 000 01359999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++++.+ ..+.+||+++ +.+.+++|++|||+|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++++++++
T Consensus 140 ~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~-- 215 (343)
T cd05285 140 EEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVR-- 215 (343)
T ss_pred HHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccc--
Confidence 999877 4788999986 889999999999998899999999999999994489999999999999999999999876
Q ss_pred Cch---HHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 249 NEP---VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 249 ~~~---~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
..+ +.+.+.+.+.+ ++|++|||+|+...+...+++++++ |+++.+|.......+++. ....+++++.+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 291 (343)
T cd05285 216 TEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY-- 291 (343)
T ss_pred cccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC--
Confidence 334 36677777776 8999999999865788999999997 999999865432222222 122346666655322
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEE
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVI 374 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi 374 (378)
.+.+.++++++.++.+.+.+.+.++|+++++.+|++.+.+++. .|++|
T Consensus 292 --~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 --ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred --hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2468889999999987654556788999999999999998753 59988
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=306.18 Aligned_cols=334 Identities=29% Similarity=0.461 Sum_probs=275.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|||+++.+.++ +.+++.+.|+++++||+||+.++++|+.|+....+.+ .+|.++|+|++|+|+++|+++..|++||+
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~ 79 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDR 79 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCCCCCcccCcceEEEEEEECCCCCcCCCCCE
Confidence 78999999875 9999999999999999999999999999998876643 35788999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+..+...|+.|.+|..++...|...... |.. ..|+|++|+.+|.+.++++|+++++++
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lP~~~~~~~ 138 (343)
T cd08236 80 VAVNPLLPCGKCEYCKKGEYSLCSNYDYI--GSR-------------------RDGAFAEYVSVPARNLIKIPDHVDYEE 138 (343)
T ss_pred EEEcCCCCCCCChhHHCcChhhCCCcceE--ecc-------------------cCCcccceEEechHHeEECcCCCCHHH
Confidence 99999999999999999999888876432 111 236999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
+|.+ ..+++||+++. ...++++++|||+|+|.+|++++|+|+.+|+..++++++++++.+.++++|++.+++++ ..
T Consensus 139 aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~--~~ 214 (343)
T cd08236 139 AAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK--EE 214 (343)
T ss_pred HHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc--cc
Confidence 9887 57889999984 78899999999998899999999999999994499999999999999999998888876 33
Q ss_pred hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc--cccccccEEEEeeeccCC--
Q 017052 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY--GLFLSGRTLKGSLFGGWK-- 325 (378)
Q Consensus 251 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~--~~~~~~~~i~g~~~~~~~-- 325 (378)
. .+.+.++.++ ++|++|||+|+...+..++++++++ |+++.+|.......+.... ..+.++.++.++......
T Consensus 215 ~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (343)
T cd08236 215 D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF 292 (343)
T ss_pred c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccccc
Confidence 4 6667777766 7999999998767888999999997 9999998664322122111 112457777777653211
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhc-Ccee-EEEE
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKE-GKCL-RSVI 374 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~-~~~~-kvvi 374 (378)
..+.+.++++++.++.+.+.+.+.+.+++++++++++.+++ +... |+|+
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 293 PGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred chhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 13468889999999987644446788999999999999998 5555 7764
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-40 Score=310.93 Aligned_cols=333 Identities=28% Similarity=0.408 Sum_probs=267.3
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC----------CCCCcccccceeEEEEEeCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~----------~~~p~~~G~e~~G~V~~vG~~v 82 (378)
+.+.++.. . ++++.+.+.|.+++++|+|||+++++|++|++.+.+. ..+|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~-~-~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRY-P-ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeC-C-CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 44444443 3 4999999999999999999999999999998877521 1346899999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
..|++||+|++.+..+|+.|..|..|.++.|..... .|+. . .|+|++|+.++.+.++++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~-~------------------~g~~~~~v~v~~~~~~~l 165 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFS-A------------------DGAFAEYIAVNARYAWEI 165 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeec-C------------------CCcceeeEEechHHeEEC
Confidence 999999999999999999999999999999986542 2221 1 259999999999999999
Q ss_pred CCCC-------ChhhhhhhchhhhhhHHHHHhh-cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017052 163 SSIA-------PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (378)
Q Consensus 163 P~~l-------~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l 234 (378)
|+++ +++ +|+++.++++||+++... .++++|++|||+|+|.+|++++|+|+.+|+.+|+++++++++.+.+
T Consensus 166 P~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~ 244 (384)
T cd08265 166 NELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA 244 (384)
T ss_pred CccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 9864 444 566667889999998666 6899999999998899999999999999986799999999999999
Q ss_pred HhCCCcEEeCCCCC-CchHHHHHHHHhCC-CccEEEeccCCh-HHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-
Q 017052 235 KAFGVTEFLNPNDN-NEPVQQVIKRITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF- 310 (378)
Q Consensus 235 ~~~g~~~vi~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~- 310 (378)
+++|+++++++++. ..++.+.+.+++.+ ++|+|+|++|++ ..+..++++++++ |+++.+|..... ..+....+
T Consensus 245 ~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~ 321 (384)
T cd08265 245 KEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEVLQ 321 (384)
T ss_pred HHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHHHh
Confidence 99999998877531 22677788888877 899999999863 4678899999997 999999865432 22222222
Q ss_pred ccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEE
Q 017052 311 LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 374 (378)
Q Consensus 311 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi 374 (378)
.+..++.+..... ....+.++++++.++.+++..++.+.|+++++++|++.+.++...|+++
T Consensus 322 ~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 322 VRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred hCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 3355666554211 1246889999999999876655678899999999999976665448875
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=304.93 Aligned_cols=331 Identities=29% Similarity=0.449 Sum_probs=277.4
Q ss_pred eeeEEeecCCCC-eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAGQP-LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~~~-~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||++++..++++ +.+.+.+.|.+++++|+|++.++++|+.|.....|.. .+|.++|+|++|+|+.+|+++..|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999988 6888888899999999999999999999998887754 34778999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|+..+..+|+.|..|..++.+.|...... |.. ..|+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~ 139 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP--GLG-------------------IDGGFAEYIVVPARALVPVPDGVP 139 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc--ccc-------------------cCCcceeeEEechHHeEECCCCCC
Confidence 99999999999999999999999999654321 211 125999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++++.++..++|||+++.....++++++|||.|+|.+|++++++|+..|+ +|+++++++++.+.++++|.+++++..
T Consensus 140 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~- 217 (338)
T cd08254 140 FAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL- 217 (338)
T ss_pred HHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC-
Confidence 999999999999999998778889999999998889999999999999999 799999999999999999998888765
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
...+.+.+ ....+ ++|+++||+|....+..++++++++ |+++.+|.......++.. ..+.++.++.++... .
T Consensus 218 -~~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~ 290 (338)
T cd08254 218 -DDSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLS-DLIARELRIIGSFGG---T 290 (338)
T ss_pred -CcCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCHH-HHhhCccEEEEeccC---C
Confidence 34555555 44555 8999999998777889999999997 999999875433223222 122346666665432 2
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.+..+++++.++.+.+. .+.++++++.++++.+.+++.. |+++++
T Consensus 291 ~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 291 PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 3568889999999988764 4789999999999999988876 998864
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=305.85 Aligned_cols=331 Identities=23% Similarity=0.376 Sum_probs=272.0
Q ss_pred eeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|+++.++.+..+++++.+.|++.++|++||+.++++|++|++.+.|.. .+|.++|||++|+|+++|+.+..|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 578888888779999999999999999999999999999999887754 45789999999999999999999999999
Q ss_pred EE-eecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 91 VL-TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 91 V~-~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
|+ .....+|++|..|.++..+.|........|.. .. .....|+|+||+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~~g~~~~~~~v~~~~~~~lp~~~~~~ 146 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKY-PD-------------GTITQGGYADHIVVDERFVFKIPEGLDSA 146 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccc-cC-------------CCcCCCcceeEEEechhheEECCCCCCHH
Confidence 97 45567899999999999999977543221110 00 01124699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+.+.+.+||+++ +..++++|++|+|.|+|.+|++++++|+.+|+ +++++++++++.+.++++|++.+++.. .
T Consensus 147 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~--~ 222 (337)
T cd05283 147 AAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK--D 222 (337)
T ss_pred HhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc--c
Confidence 9999999999999987 45568999999998889999999999999999 899999999999999999999888765 2
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccCCcCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~ 328 (378)
.++.. . ..+++|++|||+|+......++++++++ |+++.+|...... .++... +.++.++.+..... .+
T Consensus 223 ~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~~ 292 (337)
T cd05283 223 PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---RK 292 (337)
T ss_pred hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---HH
Confidence 22222 1 1348999999999865588999999997 9999998765322 222222 34688888876543 35
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
++.++++++.++++++ .+ +.|+++++++||+.+++++.. |+|++
T Consensus 293 ~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 293 ETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 7888999999998754 34 789999999999999999886 98874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-40 Score=305.16 Aligned_cols=306 Identities=21% Similarity=0.291 Sum_probs=257.3
Q ss_pred eeeEEeecCCCC---eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcC
Q 017052 13 CKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
|||+++.+++.| +++++.+.|.+.++||+|||+++++|++|+..+.|.. ..|.++|||++|+|+++|+++.+|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 789999888764 7889999999999999999999999999998887753 346789999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||+|++... .|+|++|+.++...++++|++
T Consensus 81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~ip~~ 112 (324)
T cd08292 81 QVGQRVAVAPV------------------------------------------------HGTWAEYFVAPADGLVPLPDG 112 (324)
T ss_pred CCCCEEEeccC------------------------------------------------CCcceeEEEEchHHeEECCCC
Confidence 99999987620 258999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+++++++.+++...+||+++ +.+++++|++|||+|+ |.+|++++|+|+.+|+ .++++.+++++.+.++++|++++++
T Consensus 113 ~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (324)
T cd08292 113 ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVS 190 (324)
T ss_pred CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEc
Confidence 99999999998999999987 5688999999999987 9999999999999999 8888888888888888899988888
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~ 322 (378)
.. +.++.+.+.+++.+ ++|++|||+|+ .....++++++++ |+++.+|.... ....+... .+.++.++.++...
T Consensus 191 ~~--~~~~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08292 191 TE--QPGWQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMSG-EPMQISSGDLIFKQATVRGFWGG 265 (324)
T ss_pred CC--CchHHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCCC-CCCcCCHHHHhhCCCEEEEEEcH
Confidence 76 56788889988887 99999999998 4678899999997 99999987532 22333321 23468888877654
Q ss_pred cCCc-------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 323 GWKP-------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 323 ~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.+.. .+.+.++++++.++.+.+. +.+.|+++++.+|++.+.+++.. |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 266 RWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 3211 2357789999999998754 46789999999999999887666 88864
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=303.04 Aligned_cols=331 Identities=29% Similarity=0.431 Sum_probs=277.5
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCC----CCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI----FPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
|||+++.+++ ..+++++.+.|.+.+++++||+.++++|++|...+.|... .|.++|+|++|+|+++|+++..|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7999999887 3499999999999999999999999999999988877542 3668899999999999999999999
Q ss_pred CCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||+|+..+ ..+|+.|.+|..+..+.|...... |.. ..|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~s~~~~~~~~~~~lp~~~ 139 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYT-------------------VDGTFAEYAIADARYVTPIPDGL 139 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCcccc--ccc-------------------cCCcceeEEEeccccEEECCCCC
Confidence 99999875 678999999999999999776432 211 13589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +++++.+++++.+.++++|++.++++
T Consensus 140 ~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~ 217 (341)
T cd08297 140 SFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDF 217 (341)
T ss_pred CHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcC
Confidence 999999999999999999854 58999999999988 7799999999999999 89999999999999999999999888
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (378)
+ ..++.+.+.+++++ ++|+++|+.++...+..++++++.+ |+++.+|.... ...++....+ .++.++.+.....
T Consensus 218 ~--~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 293 (341)
T cd08297 218 K--KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVGT 293 (341)
T ss_pred C--CccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccCC
Confidence 6 44677888888766 8999999877768889999999997 99999986553 2223322221 4577776654321
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.++.+++++.++.+.+ .+ ..|+++++++|++.+.+++.. |+++++
T Consensus 294 ---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 294 ---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 356888999999998764 23 679999999999999988876 999875
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=282.02 Aligned_cols=314 Identities=21% Similarity=0.311 Sum_probs=252.9
Q ss_pred cccceeeEEeecCCCC---eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCC
Q 017052 9 QVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~ 81 (378)
++...|++++.+.|.| +++++.++|....++|+||.+|+.||++|+..+.|.| .+|.+-|.|++|+|+.+|++
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~ 95 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN 95 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence 6778899999999988 8888999998888889999999999999999999988 57889999999999999999
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
+.+|++||+|+... . +.|+|++|.+.+++.+++
T Consensus 96 vkgfk~Gd~VIp~~-------------------------------a----------------~lGtW~t~~v~~e~~Li~ 128 (354)
T KOG0025|consen 96 VKGFKPGDWVIPLS-------------------------------A----------------NLGTWRTEAVFSESDLIK 128 (354)
T ss_pred cCccCCCCeEeecC-------------------------------C----------------CCccceeeEeecccceEE
Confidence 99999999998772 1 247999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHh
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKA 236 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~----l~~ 236 (378)
+++.++++.||.+....+|||..|...-++++|++|+-+|| +++|++.+|+|++.|+ +.|.+.|+....+. |+.
T Consensus 129 vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~ 207 (354)
T KOG0025|consen 129 VDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKS 207 (354)
T ss_pred cCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHH
Confidence 99999999999999999999999988889999999999999 9999999999999999 77777787766554 456
Q ss_pred CCCcEEeCCCC-CCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccE
Q 017052 237 FGVTEFLNPND-NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRT 315 (378)
Q Consensus 237 ~g~~~vi~~~~-~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 315 (378)
+|+++|+.-++ .+........ ...++.+.|||+|+. ...+..+.|.++ |.++.+|..+.++..-.....+++++.
T Consensus 208 lGA~~ViTeeel~~~~~~k~~~--~~~~prLalNcVGGk-sa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~lIFKdl~ 283 (354)
T KOG0025|consen 208 LGATEVITEEELRDRKMKKFKG--DNPRPRLALNCVGGK-SATEIARYLERG-GTMVTYGGMSKQPVTVPTSLLIFKDLK 283 (354)
T ss_pred cCCceEecHHHhcchhhhhhhc--cCCCceEEEeccCch-hHHHHHHHHhcC-ceEEEecCccCCCcccccchheeccce
Confidence 99999985431 1111111111 122789999999994 556788899997 999999998875422222333478999
Q ss_pred EEEeeeccCCcCC--------cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEEeC
Q 017052 316 LKGSLFGGWKPKT--------DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVIHM 376 (378)
Q Consensus 316 i~g~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi~~ 376 (378)
++|+++..|.... -+.++.++++.|++..+.. ...+|++...|++....... .|-+|.+
T Consensus 284 ~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~--e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 284 LRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNC--EKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred eeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccc--eeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 9999998886422 2456788889999876533 56788888888885544332 2444443
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=304.76 Aligned_cols=304 Identities=20% Similarity=0.245 Sum_probs=245.8
Q ss_pred ceeeEEeecC--CCC----eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcC
Q 017052 12 TCKAAVAWGA--GQP----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 12 ~~~a~~~~~~--~~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
.||||++.+. +.+ +++++.+.|+|++|||+|||++++||+.|........++|.++|+|++|+|++ .+..|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~~~~~p~v~G~e~~G~V~~---~~~~~ 78 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKRLNEGDTMIGTQVAKVIES---KNSKF 78 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccccCCCCCcEecceEEEEEec---CCCCC
Confidence 6999999993 443 88899999999999999999999999987653322224688999999999995 44679
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC---ceeeC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG---CAVKV 162 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~~~~i 162 (378)
++||+|+.. ++|++|+.++.+ .++++
T Consensus 79 ~~Gd~V~~~---------------------------------------------------~~~~~~~~~~~~~~~~~~~i 107 (329)
T cd08294 79 PVGTIVVAS---------------------------------------------------FGWRTHTVSDGKDQPDLYKL 107 (329)
T ss_pred CCCCEEEee---------------------------------------------------CCeeeEEEECCccccceEEC
Confidence 999999864 379999999999 99999
Q ss_pred CCCCC--h---hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 163 SSIAP--L---EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 163 P~~l~--~---~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
|++++ + ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+++
T Consensus 108 P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 108 PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKE 186 (329)
T ss_pred CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 99998 2 3334678899999999988899999999999986 9999999999999999 89999999999999999
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC--ee---e-cccccc
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EV---A-AHYGLF 310 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~---~-~~~~~~ 310 (378)
+|++++++++ ..++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|...... .. . +....+
T Consensus 187 ~Ga~~vi~~~--~~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T cd08294 187 LGFDAVFNYK--TVSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETII 262 (329)
T ss_pred cCCCEEEeCC--CccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHh
Confidence 9999999886 5677788887776689999999998 6789999999997 9999998543211 11 1 111223
Q ss_pred ccccEEEEeeeccCC--cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 311 LSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 311 ~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+++++.++....+. ..+.+.++++++.++.+++. +..+|+++++++|++.+++++.. |+++++
T Consensus 263 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 263 FKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 457777776543321 11236678899999998765 33568999999999999998876 999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=306.94 Aligned_cols=306 Identities=20% Similarity=0.239 Sum_probs=247.0
Q ss_pred eeeEEeecCCC-CeEEEEeec----CCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccce--eEEEEEeCCC
Q 017052 13 CKAAVAWGAGQ-PLVVEEVEV----NPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEA--SGIVESVGPG 81 (378)
Q Consensus 13 ~~a~~~~~~~~-~~~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~--~G~V~~vG~~ 81 (378)
+|+|....+.. .|++++.++ |+|++|||||||+|++||+.|++.+.|.. .+|+++|+++ .|.+..+|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 56676545443 288998887 78999999999999999999999887742 3577889754 4566667888
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeC-Ccee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAV 160 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~ 160 (378)
+..|++||+|+.+ |+|+||+++|+ ..++
T Consensus 88 v~~~~vGd~V~~~---------------------------------------------------g~~aey~~v~~~~~~~ 116 (338)
T cd08295 88 NPDFKVGDLVWGF---------------------------------------------------TGWEEYSLIPRGQDLR 116 (338)
T ss_pred CCCCCCCCEEEec---------------------------------------------------CCceeEEEecchhcee
Confidence 8899999999755 48999999999 7999
Q ss_pred eCC-CCCChh-hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-
Q 017052 161 KVS-SIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA- 236 (378)
Q Consensus 161 ~iP-~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~- 236 (378)
++| ++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.+++
T Consensus 117 ~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~ 195 (338)
T cd08295 117 KIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNK 195 (338)
T ss_pred ecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHh
Confidence 995 678887 799999999999999988889999999999998 9999999999999999 89999999999999998
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe------eecccccc
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE------VAAHYGLF 310 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~------~~~~~~~~ 310 (378)
+|+++++++++ ..++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|....... .++ ...+
T Consensus 196 lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~-~~~~ 271 (338)
T cd08295 196 LGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNL-LNII 271 (338)
T ss_pred cCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCH-HHHh
Confidence 99999998752 2367777777765689999999997 6789999999997 99999986543211 111 1222
Q ss_pred ccccEEEEeeeccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 311 LSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 311 ~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+++++.++....+.. .+.+.++++++.++.+++. +...|+++++++|++.+++++.. |+++++
T Consensus 272 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 272 YKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred hccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 4567777755433211 1236778899999998765 44679999999999999988876 999874
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=299.62 Aligned_cols=326 Identities=31% Similarity=0.485 Sum_probs=270.1
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++..+++++.+.+.|.|.+.+++|+|+++++++|++|+....|.. ..|.++|+|++|+|+++|+++..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 7899998866679999999999999999999999999999998887743 3467899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|+++...+|+.|..|..+.++.|.... .+|.. ..|+|++|+.++...++++|++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~~ 139 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA--EYGEE-------------------VDGGFAEYVKVPERSLVKLPDNVSDE 139 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc--ccccc-------------------cCCeeeeEEEechhheEECCCCCCHH
Confidence 9999998899999999999999998752 23321 23699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.+++++.+||+++.. +.+++++++||+|+ |.+|++++++|+..|+ .++++.+++++.+.+++++.+.+++..
T Consensus 140 ~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-- 215 (332)
T cd08259 140 SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS-- 215 (332)
T ss_pred HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH--
Confidence 999999999999999865 88999999999998 9999999999999999 889888999999999999988777654
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe-eeccccccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
+ +.+.+.+.. ++|+++|++|. .....++++++++ |+++.++....... +..... ..++.++.++... ..
T Consensus 216 ~--~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~ 285 (332)
T cd08259 216 K--FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLL-ILKEIRIIGSISA---TK 285 (332)
T ss_pred H--HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHH-HhCCcEEEEecCC---CH
Confidence 2 555555543 79999999997 4578899999986 99999987543221 122212 1346666555321 23
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
..++++++++.++.+.+. +.+.|+++++++|++.+.+++.. |++++
T Consensus 286 ~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 286 ADVEEALKLVKEGKIKPV--IDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHcCCCccc--eeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 467889999999987543 67899999999999999988876 88874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=301.02 Aligned_cols=291 Identities=18% Similarity=0.242 Sum_probs=235.6
Q ss_pred eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcc
Q 017052 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQ 104 (378)
Q Consensus 25 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~ 104 (378)
+++.+.+.|.|++|||||||.++++|+.|..-.......|.++|.|++|+|+++|+ .|++||+|+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRVAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhcccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe----------
Confidence 88899999999999999999999999976543322224578999999999999874 59999999865
Q ss_pred cccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC----CCCCChhhh-hhhchhhh
Q 017052 105 CKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV----SSIAPLEKI-CLLSCGLS 179 (378)
Q Consensus 105 c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i----P~~l~~~~a-a~~~~~~~ 179 (378)
++|++|+.++.+.+.++ |++++++++ +++++++.
T Consensus 86 -----------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~ 124 (325)
T TIGR02825 86 -----------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGL 124 (325)
T ss_pred -----------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHH
Confidence 36999999999888777 999999997 67899999
Q ss_pred hhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 180 ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|+++++++++ ...+.+.++.
T Consensus 125 TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~ 202 (325)
T TIGR02825 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT-VKSLEETLKK 202 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc-cccHHHHHHH
Confidence 99999888899999999999986 9999999999999999 8999999999999999999999998862 1356566666
Q ss_pred HhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC---Ceee---ccccccccccEEEEeeeccCCc---CCc
Q 017052 259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVA---AHYGLFLSGRTLKGSLFGGWKP---KTD 329 (378)
Q Consensus 259 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~---~~~~~~~~~~~i~g~~~~~~~~---~~~ 329 (378)
.+++++|++||++|+ ..+..++++++++ |+++.+|..... .... .....+++++++.++....+.. .+.
T Consensus 203 ~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (325)
T TIGR02825 203 ASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKA 280 (325)
T ss_pred hCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHH
Confidence 654589999999998 5678999999997 999999865421 1111 1112234567777765432211 235
Q ss_pred HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 330 LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
+.++++++.++++++. +...|+++++++|++.+++++.. |+|++
T Consensus 281 ~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 281 LKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 7789999999998776 45678999999999999988876 98874
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=299.10 Aligned_cols=269 Identities=25% Similarity=0.365 Sum_probs=219.9
Q ss_pred ccccceeEEEEEeCCCCC------cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcc
Q 017052 66 IFGHEASGIVESVGPGVT------EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV 139 (378)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~ 139 (378)
++|||++|+|+++|++|+ .|++||||.+.+..+|+.|..|+.|+++.|...... |.....+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~----------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY--GHEALDS----------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc--CcccccC-----------
Confidence 589999999999999998 899999999999999999999999999999875432 2110000
Q ss_pred cccccccceeeEEEEeCC-ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC
Q 017052 140 YHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218 (378)
Q Consensus 140 ~~~~~~g~~a~~~~v~~~-~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~ 218 (378)
.....|+|+||+.+|++ .++++|+++++++++.+++...|+|+++ +.....+|++|||+|+|++|++++|+|+.+|+
T Consensus 68 -~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~ 145 (280)
T TIGR03366 68 -GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGA 145 (280)
T ss_pred -CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 00013699999999997 7999999999999999999999999987 55667799999999999999999999999999
Q ss_pred CeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 219 SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 219 ~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++|++++++++|.++++++|++.+++.+ + ..+.+.+++.+ ++|++||++|++..+..++++++++ |+++.+|..
T Consensus 146 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~--~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~ 220 (280)
T TIGR03366 146 ARVVAADPSPDRRELALSFGATALAEPE--V--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV 220 (280)
T ss_pred CEEEEECCCHHHHHHHHHcCCcEecCch--h--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccC
Confidence 5599999999999999999999988764 2 24556666666 8999999999888899999999997 999999976
Q ss_pred CCCCeeeccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcC--CCCCCcceeeeeccccH
Q 017052 298 KLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK--EFMVDEFITHNLLFEDI 357 (378)
Q Consensus 298 ~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~i 357 (378)
.......+.+.. +.+++++.|+.... .++++++++++.++ ++++.++++++|+++++
T Consensus 221 ~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 221 FPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 432233333333 35688998876432 35789999999974 67777889999999874
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-39 Score=300.22 Aligned_cols=328 Identities=28% Similarity=0.428 Sum_probs=262.7
Q ss_pred EeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccc-cCC-----CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 17 VAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 17 ~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
++++.++ +++++.++|.++++||+||+.++++|++|+.... +.. .+|.++|+|++|+|+++|+++.+|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4666665 9999999999999999999999999999987653 321 35778999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+..+..+|+.|.+|..|+.+.|..... .+..... ....|+|+||+.++.+.++++|+++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~~ 144 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF--LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLRR 144 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc--eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999997532 1111000 01236999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
|+. ..++++||+++.+...+ ++++|||.|+|.+|++++|+|+.+|+.+++++++++++.++++++|.+++++++ ..
T Consensus 145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~--~~ 220 (339)
T cd08232 145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLA--RD 220 (339)
T ss_pred hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCC--ch
Confidence 876 56888999988555555 999999988899999999999999986789998999999999999999988875 22
Q ss_pred hHHHHHHHHh-C-CCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccCCcC
Q 017052 251 PVQQVIKRIT-D-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 251 ~~~~~i~~~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~ 327 (378)
.+ .++. . +++|+++|++|+...+...+++++++ |+++.+|..... ....... +.+++++.+.... .
T Consensus 221 ~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~ 289 (339)
T cd08232 221 PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFRF----D 289 (339)
T ss_pred hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEecC----H
Confidence 22 2222 2 26999999999766788999999997 999999865422 2222221 3456777665422 3
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.++++++++.++.+.+...+.++|+++++++|++.+.+++.. |+++++
T Consensus 290 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 290 DEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 4688899999999987666677899999999999999887765 999874
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=298.41 Aligned_cols=332 Identities=24% Similarity=0.385 Sum_probs=275.3
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++...+.+ +++++.+.|.+.+++|+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 789999854433 7888888888999999999999999999998887753 2477899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|++.+..+|+.|.+|.+++++.|..... .|.. ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-------------------~~g~~~~~~~~~~~~~~~~p~~~ 139 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEH-------------------VDGGYAEYVAVPARNLLPIPDNL 139 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc--cccc-------------------cCcceeEEEEechHHceeCCCCC
Confidence 99999999999999999999999999987533 2221 13589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.+++.+.+||+++.+...+.++++++|+|+ +.+|++++++++..|+ +++.+++++++.+.++.++.+.+++.
T Consensus 140 ~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 218 (342)
T cd08266 140 SFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY 218 (342)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec
Confidence 999999999999999999888888999999999988 7999999999999999 78999999999999988888777765
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~ 323 (378)
. +.++.+.+.+.+.+ ++|+++|++|+ ..+...+++++++ |+++.++..... ...+.. ..+.++.++.+.....
T Consensus 219 ~--~~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
T cd08266 219 R--KEDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT 293 (342)
T ss_pred C--ChHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC
Confidence 4 45666677776665 89999999997 5778899999997 999999866542 122222 2234577777665432
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
...+.++++++.++.+.+ .+.+.|+++++++|++.+.+++.. |+++++
T Consensus 294 ---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 294 ---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred ---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 236788889999988654 367889999999999999887766 998863
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=297.52 Aligned_cols=328 Identities=30% Similarity=0.444 Sum_probs=271.5
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
|||+++.++++ +++.+.+.|+++++||+||++++++|+.|+....|.. .+|.++|+|++|+|+++|+++..|++||+
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~ 79 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDR 79 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 78999998885 9999999999999999999999999999999887754 36779999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+..+...|+.|..|..++.+.|...... |.. ..|+|++|+.++.+.++++|+++++.+
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~v~~~~~~~lP~~~~~~~ 138 (334)
T cd08234 80 VAVDPNIYCGECFYCRRGRPNLCENLTAV--GVT-------------------RNGGFAEYVVVPAKQVYKIPDNLSFEE 138 (334)
T ss_pred EEEcCCcCCCCCccccCcChhhCCCccee--ccC-------------------CCCcceeEEEecHHHcEECcCCCCHHH
Confidence 99988888999999999999888887531 111 125999999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
++.+ ..+.++++++ ..+++++|++|||+|+|.+|++++++|+..|+.+++++++++++.+.++++|++.++++. ..
T Consensus 139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~ 214 (334)
T cd08234 139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS--RE 214 (334)
T ss_pred Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC--CC
Confidence 8876 6788999988 888999999999998899999999999999994489999999999999999998888775 33
Q ss_pred hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcCC
Q 017052 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKT 328 (378)
Q Consensus 251 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~ 328 (378)
++... +.+.+ ++|++||++|+...+...+++++++ |+++.+|.........+....+ .++.++.+.... ..
T Consensus 215 ~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 287 (334)
T cd08234 215 DPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PY 287 (334)
T ss_pred CHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HH
Confidence 44333 33344 8999999998767888999999997 9999998765322333333322 246677665432 24
Q ss_pred cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 329 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.++++++++.++.+.+.+.+.++++++++++|++.+.+ +.. |+++
T Consensus 288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 288 TFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 58889999999998765556788999999999999998 554 8876
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=297.58 Aligned_cols=330 Identities=28% Similarity=0.418 Sum_probs=268.1
Q ss_pred eecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 18 AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 18 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
-++++.++++++.+.|.|+++|++|||.++++|++|+.++.+.. .+|.++|+|++|+|+++|+++..|++||+|
T Consensus 4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 35678889999999999999999999999999999988754321 356789999999999999999999999999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhh
Q 017052 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171 (378)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a 171 (378)
+..+...|+.|..|..+..+.|..... .|.. ..|+|++|+.++.+.++++|++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKI--FGVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcce--Eeec-------------------CCCcceeEEEeehHHcEECcCCCChHhh
Confidence 999999999999999999999988643 1211 1359999999999999999999998655
Q ss_pred hhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCch
Q 017052 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~ 251 (378)
+++..+.+|++++ ....++|++|+|.|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++.++++. ..+
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~--~~~ 217 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPF--KED 217 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEccc--ccC
Confidence 5667888999876 34578999999988899999999999999994488888889999999999998888876 456
Q ss_pred HHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcH
Q 017052 252 VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDL 330 (378)
Q Consensus 252 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 330 (378)
+.+.+.++..+ ++|+++||+|+...+...+++++++ |+++.+|.......+.+....+.+++++.+... ....+.+
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 294 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETW 294 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhH
Confidence 77788887766 8999999998777888999999997 999999876432222222222344666655431 1112457
Q ss_pred HHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 331 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 331 ~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.++++++.++.+++.+.+.+.++++++.++++.+++++..|+++++
T Consensus 295 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 295 YTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 8899999999987655577899999999999999877645999865
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=300.18 Aligned_cols=296 Identities=17% Similarity=0.207 Sum_probs=231.1
Q ss_pred eEEEEeecCCCC-CCcEEEEEeEEecCcccccccc---cC---CCCCcccccceeEEEEEeCCCCCcCCCCCEEEeeccc
Q 017052 25 LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWE---TQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97 (378)
Q Consensus 25 ~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~---g~---~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (378)
+++.+.+.|.|. ++||+|||+|+|||+.|..... +. .++|.++|||++|+|+++|+++++|++||+|+.+
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 99 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--- 99 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence 888999999874 9999999999999998853221 11 1457889999999999999999999999999764
Q ss_pred CCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh----hhh
Q 017052 98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK----ICL 173 (378)
Q Consensus 98 ~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~----aa~ 173 (378)
.++|+||++++++.++++|+++++++ +++
T Consensus 100 -----------------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~ 132 (345)
T cd08293 100 -----------------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGA 132 (345)
T ss_pred -----------------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhh
Confidence 03799999999999999999864432 456
Q ss_pred hchhhhhhHHHHHhhcCCCCC--CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCC
Q 017052 174 LSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNN 249 (378)
Q Consensus 174 ~~~~~~ta~~al~~~~~~~~g--~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~ 249 (378)
++.++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|++++++++ .
T Consensus 133 ~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~--~ 210 (345)
T cd08293 133 VGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK--T 210 (345)
T ss_pred cCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC--C
Confidence 777899999998788888877 99999998 9999999999999998569999999999998876 9999999886 5
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-C--ee--eccc--cccc--cccEEEEee
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-P--EV--AAHY--GLFL--SGRTLKGSL 320 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~--~~--~~~~--~~~~--~~~~i~g~~ 320 (378)
.++.+.+++++++++|++||++|+. .+..++++++++ |+++.+|..... . .. .+.. ..+. .++++....
T Consensus 211 ~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08293 211 DNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFL 288 (345)
T ss_pred CCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEE
Confidence 6788888887766899999999984 578999999997 999999853211 1 10 1110 1111 233333322
Q ss_pred eccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 321 FGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 321 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
...+.. .+.++++++++.++.+++. +...++++++++|++.+++++.. |+++++
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 289 VLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred eeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 211110 1235677889999998765 34557999999999999988876 999875
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=296.52 Aligned_cols=318 Identities=27% Similarity=0.333 Sum_probs=256.2
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++..++ +.+++.+.+.|+++++||+||+.++++|++|+..+.+.. .+|.++|||++|+|+++|+++..|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGD 80 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCCCCCCCeecccceeEEEEEECCCCCCCCCCC
Confidence 7899998776 458888888888999999999999999999988876532 3477899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.+..+|+.|.+|+.|+++.|..... .|.. ..|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (325)
T cd08264 81 RVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVV-------------------SNGGYAEYIVVPEKNLFKIPDSISDE 139 (325)
T ss_pred EEEECCCcCCCCChhhcCCCccccCccce--eecc-------------------CCCceeeEEEcCHHHceeCCCCCCHH
Confidence 99999988999999999999999987543 2221 13599999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.+++++.+||+++. .+++++|++|+|+|+ |.+|++++++|+.+|+ +++++.+ .+.++++|++++++.+
T Consensus 140 ~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~-- 211 (325)
T cd08264 140 LAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD-- 211 (325)
T ss_pred HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch--
Confidence 99999999999999984 488999999999998 9999999999999999 7888752 3677889998888764
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 327 (378)
+..+.+++++ +++|+|+|++|+ ..+..++++++++ |+++.+|.... ....+....+ ..+.++.+...+. +
T Consensus 212 --~~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (325)
T cd08264 212 --EVEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG-GEVKLDLSDLYSKQISIIGSTGGT---R 282 (325)
T ss_pred --HHHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCC-CCCccCHHHHhhcCcEEEEccCCC---H
Confidence 2245566666 689999999997 6888999999997 99999987522 1122222222 2355666554322 3
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EE
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RS 372 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kv 372 (378)
+.++++++++.... . .+.+.|+++++++|++.+.+++.. |+
T Consensus 283 ~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 283 KELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 46788888885333 2 256889999999999999877655 54
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-38 Score=292.07 Aligned_cols=320 Identities=27% Similarity=0.380 Sum_probs=263.6
Q ss_pred eeeEEeecCCC----CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcC
Q 017052 13 CKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 13 ~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
|||+++.+++. ++++++.+.|.++++||+||+.++++|++|+..+.|.. .+|.++|||++|+|+++|+++.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 78999999884 58888888888999999999999999999998887753 456789999999999999999999
Q ss_pred CCCCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 86 NEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 86 ~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
++||+|++.+ ..+|++|..|..+..+.|...... |.. ..|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lp~ 139 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYT-------------------VDGGYAEYMVADERFAYPIPE 139 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccc-------------------cCCceEEEEEecchhEEECCC
Confidence 9999997654 578999999999999999877643 211 125899999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++.+++.+++.+.|||+++ +.++++++++|||+|+|++|++++++|+..|+ +++++++++++.+.++++|++.+++
T Consensus 140 ~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 217 (329)
T cd08298 140 DYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGD 217 (329)
T ss_pred CCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEec
Confidence 999999999999999999998 88999999999999889999999999999999 8999999999999999999988877
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
.+. . ...++|+++++.+....+..++++++++ |+++.+|.... .....+...+..+..+.+.....
T Consensus 218 ~~~--~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~- 283 (329)
T cd08298 218 SDD--L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANLT- 283 (329)
T ss_pred cCc--c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCCC-
Confidence 642 1 1237999999877667889999999997 99999885432 11111222223455555544221
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.+.+.++++++.++.+++ +.+.|+++++++|++.+++++.. |+++
T Consensus 284 --~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 284 --RQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --HHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 245788889999988765 25889999999999999988776 7763
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=290.93 Aligned_cols=325 Identities=28% Similarity=0.453 Sum_probs=265.2
Q ss_pred eeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
||+++.++|..+++++.+.|.+.+++++|++.++++|++|+..+.|.. .+|.++|+|++|+|+++|+++.+|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 689999997679999999999999999999999999999998877643 45678999999999999999999999999
Q ss_pred EEeecc-cCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 91 VLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 91 V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
|++.+. .+|+.|.+|.+++++.|...... ++. ..|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT--GYT-------------------TQGGYAEYMVADAEYTVLLPDGLPLA 139 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc--Ccc-------------------cCCccccEEEEcHHHeEECCCCCCHH
Confidence 987553 67999999999999999986542 211 12589999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+++.+++.+.+||+++. ...++++++|||+|+|.+|++++++|+..|+ +|+++++++++.+.++++|++.+++.. .
T Consensus 140 ~~~~l~~~~~ta~~~l~-~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~ 215 (330)
T cd08245 140 QAAPLLCAGITVYSALR-DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG--A 215 (330)
T ss_pred HhhhhhhhHHHHHHHHH-hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC--C
Confidence 99999999999999984 4789999999999888899999999999999 899999999999999999998888764 2
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCc
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD 329 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 329 (378)
...... ..+++|+++|++++......++++++++ |+++.++..............+.++.++.+..... ...
T Consensus 216 ~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 287 (330)
T cd08245 216 ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---RAD 287 (330)
T ss_pred cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---HHH
Confidence 222222 2247999999988767889999999997 99999986543211110111223466666665432 246
Q ss_pred HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 330 LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
++++++++.++.+.+ ..+.++++++.+|++.+++++.. |+++
T Consensus 288 ~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 288 LQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 788889999998764 34789999999999999988776 7764
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=293.81 Aligned_cols=320 Identities=27% Similarity=0.318 Sum_probs=253.8
Q ss_pred eeeEEeecCCCC--eEEEE-eecCCCCCCcEEEEEeEEecCcccccccccCC-----------------------CCCcc
Q 017052 13 CKAAVAWGAGQP--LVVEE-VEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------------------IFPRI 66 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----------------------~~p~~ 66 (378)
|||+++.+.+.+ +++.+ .+.|.+.+++|+|||.++++|++|+....|.. .+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 789999877653 55654 46777899999999999999999998776532 35688
Q ss_pred cccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCccccccccc
Q 017052 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS 146 (378)
Q Consensus 67 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g 146 (378)
+|||++|+|+++|+++..|++||+|+..+..+|+.|..|.. |.. .|.. ..|
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~-----~~~~-------------------~~g 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY-----IGSE-------------------RDG 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc-----cCCC-------------------CCc
Confidence 99999999999999999999999999987777777655321 111 1100 125
Q ss_pred ceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 147 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
+|++|+.++.+.++++|+++++++++.+++++.|||+++ ...++++|++|||+|+ |.+|++++++|+.+|+ ++++++
T Consensus 132 ~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~ 209 (350)
T cd08274 132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVA 209 (350)
T ss_pred cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEe
Confidence 999999999999999999999999999999999999987 7889999999999998 9999999999999999 788887
Q ss_pred CChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeee
Q 017052 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304 (378)
Q Consensus 226 ~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 304 (378)
+++ +.+.++++|++.+++.+ ...+.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|..... ...
T Consensus 210 ~~~-~~~~~~~~g~~~~~~~~--~~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~ 281 (350)
T cd08274 210 GAA-KEEAVRALGADTVILRD--APLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAGP-VVE 281 (350)
T ss_pred Cch-hhHHHHhcCCeEEEeCC--CccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCCc-ccc
Confidence 665 88888999997665543 233333 444555 89999999997 5788999999997 999999865332 123
Q ss_pred ccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 305 AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 305 ~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.... +.++.++.++.... .+.+.++++++.++.++. .+.+.++++++++|++.+.+++.. |+++++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 282 LDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 33333 34577887776532 346888999999998754 366889999999999999887776 988863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=288.12 Aligned_cols=311 Identities=21% Similarity=0.239 Sum_probs=252.0
Q ss_pred ceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCC
Q 017052 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
+||++++.++|.+ +++++++.|.++++||+|||.++|+|++|+....|.+ .+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999998865 8889999999999999999999999999998887754 3567899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+.... +.|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~-----------------------------------------------~~g~~~~~v~v~~~~~~~lp~~~ 113 (327)
T PRK10754 81 VGDRVVYAQS-----------------------------------------------ALGAYSSVHNVPADKAAILPDAI 113 (327)
T ss_pred CCCEEEECCC-----------------------------------------------CCcceeeEEEcCHHHceeCCCCC
Confidence 9999975410 12589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.+++.+.+||.++.+...+++|++|+|+|+ |.+|++++|+|+.+|+ +++++++++++.+.++++|++++++.
T Consensus 114 ~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 192 (327)
T PRK10754 114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINY 192 (327)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC
Confidence 999999999999999999877788999999999976 9999999999999999 79999999999999999999888877
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-CeeeccccccccccEE-E-Eeee
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTL-K-GSLF 321 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i-~-g~~~ 321 (378)
+ ..++.+.+++++.+ ++|+++||+|+ ......+++++++ |+++.+|..... ..+.+.... .++..+ . ....
T Consensus 193 ~--~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 267 (327)
T PRK10754 193 R--EENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGPVTGVNLGILN-QKGSLYVTRPSLQ 267 (327)
T ss_pred C--CCcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCCCCCcCHHHHh-ccCceEEecceee
Confidence 5 55677888888887 89999999997 5778899999997 999999876431 112221111 111111 0 0000
Q ss_pred ccCCcC----CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 322 GGWKPK----TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 322 ~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
..+... +.+.++++++.++.+++...+.+.|+++++++|++.+++++.. |+||+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 268 GYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 111111 1244678899999987655556889999999999999988876 99986
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=290.62 Aligned_cols=309 Identities=24% Similarity=0.320 Sum_probs=253.7
Q ss_pred eeeEEeecCCCC---eEEEEeecCCCCC-CcEEEEEeEEecCcccccccccCCC--------CCcccccceeEEEEEeCC
Q 017052 13 CKAAVAWGAGQP---LVVEEVEVNPPQP-EEIRIKVVCTSLCRSDITAWETQAI--------FPRIFGHEASGIVESVGP 80 (378)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~--------~p~~~G~e~~G~V~~vG~ 80 (378)
|||+++.+.+.| +++++.|.|.|.+ ++|+||+.++++|++|+..+.|... .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999999876 8999999998888 9999999999999999988877541 566899999999999999
Q ss_pred CCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
++..|++||+|++... ..|+|++|+.++.+.++
T Consensus 81 ~v~~~~~Gd~V~~~~~-----------------------------------------------~~g~~~~~~~v~~~~~~ 113 (341)
T cd08290 81 GVKSLKPGDWVIPLRP-----------------------------------------------GLGTWRTHAVVPADDLI 113 (341)
T ss_pred CCCCCCCCCEEEecCC-----------------------------------------------CCccchheEeccHHHeE
Confidence 9999999999987621 02589999999999999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHH
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAK 235 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----~~~~~l~ 235 (378)
++|+++++++++.+++.+.|||+++.....+++|++|||+|+ |.+|++++|+|+++|+ +++++.+++ ++.+.++
T Consensus 114 ~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~ 192 (341)
T cd08290 114 KVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLK 192 (341)
T ss_pred eCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHH
Confidence 999999999999999999999999877788999999999987 9999999999999999 777776665 6788888
Q ss_pred hCCCcEEeCCCCCCc---hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccc
Q 017052 236 AFGVTEFLNPNDNNE---PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFL 311 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~---~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~ 311 (378)
++|++++++++ .. .+...++.+.++++|++|||+|+ ..+...+++++++ |+++.+|..... ...+.. ..+.
T Consensus 193 ~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~ 267 (341)
T cd08290 193 ALGADHVLTEE--ELRSLLATELLKSAPGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIF 267 (341)
T ss_pred hcCCCEEEeCc--ccccccHHHHHHHHcCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhh
Confidence 99999998875 33 56677777665589999999998 4567889999997 999999865432 222332 2245
Q ss_pred cccEEEEeeeccCCc-------CCcHHHHHHHHHcCCCCCCcceeeee---ccccHHHHHHHhhcCcee-EEEEeC
Q 017052 312 SGRTLKGSLFGGWKP-------KTDLPSLVNRYLKKEFMVDEFITHNL---LFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 312 ~~~~i~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
++.++.+.....+.. ...+.++++++.++.+.+. ....+ +++++++|++.+.+++.. |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 268 KDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 688888776543210 1246778889999987754 33556 999999999999888776 999875
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=287.84 Aligned_cols=306 Identities=18% Similarity=0.200 Sum_probs=243.5
Q ss_pred eeEEeecC---CCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcC
Q 017052 14 KAAVAWGA---GQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 14 ~a~~~~~~---~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
||+++.++ +.+ +++.+.|.|+|+++||+|||+++++|++|.....|.. .+|.++|+|++|+|+++|+++..|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57888886 443 8888999999999999999999999999998776653 456789999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||+|+..... ...|+|++|+.++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~~---------------------------------------------~~~g~~~~~~~v~~~~~~~ip~~ 115 (336)
T TIGR02817 81 KPGDEVWYAGDI---------------------------------------------DRPGSNAEFHLVDERIVGHKPKS 115 (336)
T ss_pred CCCCEEEEcCCC---------------------------------------------CCCCcccceEEEcHHHcccCCCC
Confidence 999999865100 01259999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCC-----CCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~-----g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g 238 (378)
+++++++.+++++.|||+++....++++ |++|||+|+ |.+|++++|+|+.+ |+ +|+++++++++.+.++++|
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g 194 (336)
T TIGR02817 116 LSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELG 194 (336)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcC
Confidence 9999999999999999999888888877 999999987 99999999999998 99 8999999999999999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKG 318 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 318 (378)
++++++++ . ++.+.+++...+++|+++|++++...+...+++++++ |+++.++... .++..+.. .++.++.+
T Consensus 195 ~~~~~~~~--~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~---~~~~~~~~-~~~~~~~~ 266 (336)
T TIGR02817 195 AHHVIDHS--K-PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDPA---ELDISPFK-RKSISLHW 266 (336)
T ss_pred CCEEEECC--C-CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEcccc---cccchhhh-hcceEEEE
Confidence 99998864 2 5667777754448999999987667889999999997 9999885321 22222111 13355444
Q ss_pred eeec--cCCc-------CCcHHHHHHHHHcCCCCCCcceeeee---ccccHHHHHHHhhcCcee-EEEEe
Q 017052 319 SLFG--GWKP-------KTDLPSLVNRYLKKEFMVDEFITHNL---LFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 319 ~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
..+. .... ...+.++++++.++.+++. +.+.+ +++++++|++.+++++.. |++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 267 EFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 3221 1100 1236788899999987643 33444 478999999999988776 88874
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=281.06 Aligned_cols=297 Identities=28% Similarity=0.436 Sum_probs=247.0
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||++.++++ +++++++.+.|.+.+++|+|||.++++|++|.....|.. ..|.++|+|++|+|+.+|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 6899998866 349999999999999999999999999999998877754 457889999999999999999999999
Q ss_pred CEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 89 EHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 89 d~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
|+|+..+ ..+|+.|.+|..+....|.... +.|.. ..|+|++|+.++.+.++++|++++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~~ 139 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRK--GIGTQ-------------------ADGGFAEYVLVPEESLHELPENLS 139 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCc--eeeec-------------------CCCceEEEEEcchHHeEECcCCCC
Confidence 9999876 4789999999999999887642 11211 136999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhCCCcEEeCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~--~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++ +...+.+||+++....+++++++|||.|+|.+|++++|+|+.+|+ +++++. +++++.+.++++|++++ ++
T Consensus 140 ~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~ 216 (306)
T cd08258 140 LEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NG 216 (306)
T ss_pred HHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CC
Confidence 99887 667888999999888899999999998779999999999999999 777763 35568888899999888 77
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 323 (378)
. ..++.+.+.++..+ ++|++||++|+...+...+++++++ |+++.+|.... ....+.... +.+++++.|++++.
T Consensus 217 ~--~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~ 292 (306)
T cd08258 217 G--EEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSST 292 (306)
T ss_pred C--cCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecCc
Confidence 5 56777788887766 8999999998767888999999997 99999998752 223333222 25799999988754
Q ss_pred CCcCCcHHHHHHHHHcC
Q 017052 324 WKPKTDLPSLVNRYLKK 340 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~ 340 (378)
.++++++++++++|
T Consensus 293 ---~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 ---PASWETALRLLASG 306 (306)
T ss_pred ---hHhHHHHHHHHhcC
Confidence 45788999888765
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=285.17 Aligned_cols=308 Identities=24% Similarity=0.315 Sum_probs=252.1
Q ss_pred ceeeEEeecCCC----CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC
Q 017052 12 TCKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 12 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+|||+++.+++. ++++++.+.|.+.++|++|||.++++|++|+....|.. .+|.++|+|++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 599999999886 38899999999999999999999999999998876643 4577899999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
.+++||+|+.. . .|+|++|+.++.+.++++|
T Consensus 81 ~~~~Gd~V~~~-------------------------------~------------------~g~~~s~~~v~~~~~~~ip 111 (329)
T cd08250 81 DFKVGDAVATM-------------------------------S------------------FGAFAEYQVVPARHAVPVP 111 (329)
T ss_pred CCCCCCEEEEe-------------------------------c------------------CcceeEEEEechHHeEECC
Confidence 99999999876 1 2589999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++ ..+++.+++++.+||+++.+...+++|++|+|+|+ |.+|++++|+|+..|+ +++++.+++++.+.++++|++.+
T Consensus 112 ~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 188 (329)
T cd08250 112 EL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRP 188 (329)
T ss_pred CC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceE
Confidence 97 35677888999999999877788999999999997 9999999999999999 79999899999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC---------eeeccccccccc
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP---------EVAAHYGLFLSG 313 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------~~~~~~~~~~~~ 313 (378)
++.+ ..++.+.+....++++|++||++|+ ..+...+++++++ |+++.+|...... ...+....+.++
T Consensus 189 ~~~~--~~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T cd08250 189 INYK--TEDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKS 264 (329)
T ss_pred EeCC--CccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcC
Confidence 8765 4456666666554589999999997 6888999999997 9999998764320 112223334557
Q ss_pred cEEEEeeeccCC--cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 314 RTLKGSLFGGWK--PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 314 ~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.++.+..+.... ..+.+.++++++.++.+++...+.+.++++++++|++.+++++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 265 ASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 788776543211 123467788899999877643344668999999999999988776 88864
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=281.70 Aligned_cols=309 Identities=21% Similarity=0.251 Sum_probs=253.5
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCc
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
|||+++++++.+ +++.+.+.|.+.+++|+||+.++++|++|+....|.. .+|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 789999886654 6677777777899999999999999999998876643 23578999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
+++||+|++.... ..|+|++|+.++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~----------------------------------------------~~g~~~~~~~v~~~~~~~lp~ 114 (324)
T cd08244 81 AWLGRRVVAHTGR----------------------------------------------AGGGYAELAVADVDSLHPVPD 114 (324)
T ss_pred CCCCCEEEEccCC----------------------------------------------CCceeeEEEEEchHHeEeCCC
Confidence 9999999876210 125999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
++++++++.+++.+.||| ++.+...++++++|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++.++
T Consensus 115 ~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 192 (324)
T cd08244 115 GLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAV 192 (324)
T ss_pred CCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 999999999999999995 5567889999999999986 9999999999999999 899999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEeee
Q 017052 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLF 321 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~ 321 (378)
+.. +.++.+.+.++.++ ++|+++|++|+. ....++++++.+ |+++.+|...... ..++. ..+.++.++.+...
T Consensus 193 ~~~--~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08244 193 DYT--RPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLLG 267 (324)
T ss_pred ecC--CccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEeec
Confidence 775 55677778877776 899999999985 568899999997 9999998765432 23332 22345778777655
Q ss_pred ccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..... .+.+.++++++.++.+.. .+...|+++++++|++.+++++.. |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 268 VQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 33211 234667888898888754 366889999999999999988776 998864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=281.10 Aligned_cols=328 Identities=25% Similarity=0.355 Sum_probs=265.8
Q ss_pred eeeEEeecCC--CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||++++..+ +++++.+.+.|.+++++++||+.++++|++|+....|.. ..|.++|||++|+|+++|+.+.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 8999999775 348888888888999999999999999999998877654 2466899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+......|+ .+.++.|.... +.|.. ..|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~------~~~~~~~~~~~--~~~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~ 133 (336)
T cd08276 81 VGDRVVPTFFPNWL------DGPPTAEDEAS--ALGGP-------------------IDGVLAEYVVLPEEGLVRAPDHL 133 (336)
T ss_pred CCCEEEEecccccc------ccccccccccc--ccccc-------------------cCceeeeEEEecHHHeEECCCCC
Confidence 99999987655554 34444553321 12211 13589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++.+++.+++.+.+||+++.+...+++|++|+|+|+|++|++++++|+..|+ ++++++.++++.+.++++|.+.+++..
T Consensus 134 ~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (336)
T cd08276 134 SFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYR 212 (336)
T ss_pred CHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCC
Confidence 9999999999999999998777889999999999889999999999999999 799999999999999999999988775
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
. ..++.+.+.+++++ ++|+++|++++ ..+..++++++++ |+++.+|..............+.++.++.+.....
T Consensus 213 ~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 287 (336)
T cd08276 213 T-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS-- 287 (336)
T ss_pred c-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc--
Confidence 2 15677788888876 89999999986 6788999999997 99999987654221111222345688888776543
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.+.++++++.++.+.+. +.+.+++++++++++.+.+++.. |+++++
T Consensus 288 -~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 -RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred -HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 3468888899988876543 45789999999999999887776 888763
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=281.13 Aligned_cols=310 Identities=20% Similarity=0.289 Sum_probs=252.9
Q ss_pred ceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcC
Q 017052 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
||||+++.+++.+ +++++.+.|++.++|++|||.++++|+.|+....|.. ..|.++|+|++|+|+++|+.+..+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 6999999988863 7777778888999999999999999999988877643 234589999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||+|+.+.. .|+|++|+.++.+.++++|++
T Consensus 81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~v~~~~~~~ip~~ 112 (334)
T PTZ00354 81 KEGDRVMALLP------------------------------------------------GGGYAEYAVAHKGHVMHIPQG 112 (334)
T ss_pred CCCCEEEEecC------------------------------------------------CCceeeEEEecHHHcEeCCCC
Confidence 99999987510 158999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+++++++.+++++.+||+++.+...+++|++|||+|+ |.+|++++++|+.+|+ .++.+.+++++.+.++++|++++++
T Consensus 113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (334)
T PTZ00354 113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIR 191 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999999877788999999999997 9999999999999999 7777889999999999999988887
Q ss_pred CCCCCch-HHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeee-cccccc-ccccEEEEee
Q 017052 245 PNDNNEP-VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AHYGLF-LSGRTLKGSL 320 (378)
Q Consensus 245 ~~~~~~~-~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~ 320 (378)
.. ..+ +.+.+.+.+++ ++|++||++++ ..+..++++++++ |+++.+|.... ..+. +....+ .+..++.++.
T Consensus 192 ~~--~~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (334)
T PTZ00354 192 YP--DEEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFST 266 (334)
T ss_pred cC--ChhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeee
Confidence 65 333 67778887766 89999999986 6788999999997 99999986543 2211 332222 3455777765
Q ss_pred eccCCcC-------CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 321 FGGWKPK-------TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 321 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
....... +.+.++++++.++.+.+. +.+.+++++++++++.+.+++.. |+++.++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 267 LRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 4331110 123567788888887643 56889999999999999887765 9999775
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=276.42 Aligned_cols=310 Identities=19% Similarity=0.253 Sum_probs=241.0
Q ss_pred eeeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||++++++++ ++++++.+.|.+++++|+||+.++++|++|+..+.|.. .+|.++|||++|+|+++ .+..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999986 69999999999999999999999999999998887754 24778999999999999 456799
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..... .|+. ..|+|++|+.++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~g~~-------------------~~g~~~~~~~v~~~~~~~lp~~~ 116 (325)
T cd05280 79 EGDEVLVTGYD-----------------------LGMN-------------------TDGGFAEYVRVPADWVVPLPEGL 116 (325)
T ss_pred CCCEEEEcccc-----------------------cCCC-------------------CCceeEEEEEEchhhEEECCCCC
Confidence 99999875210 1111 12589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhc--CCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVA--DIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~--~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++++++.+++.+.+||+++.... ++. .+++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++++
T Consensus 117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 195 (325)
T cd05280 117 SLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEV 195 (325)
T ss_pred CHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE
Confidence 99999999999999999885543 335 3579999998 9999999999999999 79999999999999999999988
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++.. .. .....+....+++|++||++|+ ..+...+++++++ |+++.+|...... ..+....+ .++.++.+...
T Consensus 196 ~~~~--~~-~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 196 LDRE--DL-LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPE-LTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred Ecch--hH-HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCCc-cccccchheeeeeEEEEEEe
Confidence 8764 21 1122222333389999999998 6789999999997 9999998764322 13333333 46888877655
Q ss_pred ccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..... .+.++.+.+++..+.. . .+..+|+++++++|++.+.+++.. |+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 270 VNCPMELRKQVWQKLATEWKPDLL-E--IVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred ecCchhHHHHHHHHHHHHHhcCCc-c--ceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 43211 0122334444445522 2 257899999999999999988877 998864
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=276.06 Aligned_cols=297 Identities=21% Similarity=0.270 Sum_probs=242.9
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCCCE
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEH 90 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (378)
||++++.+.+ | +++++.+.|.++++||+||+.++++|+.|.....+. ..|.++|+|++|+|+++|+++..|++||+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~ 78 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-PDGAVPGWDAAGVVERAAADGSGPAVGAR 78 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-CCCCcccceeEEEEEEeCCCCCCCCCCCE
Confidence 6899998765 4 677788889999999999999999999998876533 45778999999999999999999999999
Q ss_pred EEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhh
Q 017052 91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 170 (378)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~ 170 (378)
|+... ..|+|++|+.++.+.++++|+++++++
T Consensus 79 V~~~~------------------------------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~ 110 (305)
T cd08270 79 VVGLG------------------------------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQ 110 (305)
T ss_pred EEEec------------------------------------------------CCcceeeEEEEchHHeEECCCCCCHHH
Confidence 98761 025899999999999999999999999
Q ss_pred hhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 171 aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
++.+++.+.|||+++.+.... +|++|+|+|+ |.+|++++++|+..|+ +++++++++++.+.++++|++.+++.. .
T Consensus 111 a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~ 186 (305)
T cd08270 111 AATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG--S 186 (305)
T ss_pred HHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc--c
Confidence 999999999999998655544 5999999998 9999999999999999 899999999999999999987665432 1
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccccc---ccEEEEeeecc-CC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS---GRTLKGSLFGG-WK 325 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~---~~~i~g~~~~~-~~ 325 (378)
++..+++|+++|++|+ ..+..++++++.+ |+++.+|.... ....++...+.. +.++.+..+.. ..
T Consensus 187 --------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (305)
T cd08270 187 --------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSSG-EPAVFNPAAFVGGGGGRRLYTFFLYDGEP 255 (305)
T ss_pred --------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccCC-CcccccHHHHhcccccceEEEEEccCHHH
Confidence 1122479999999998 4788999999997 99999987642 223333333333 77777776542 11
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..+.+..+++++.++++.+. +.++++++++++|++.+.+++.. |+++.+
T Consensus 256 ~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 256 LAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 12457888999999998754 66889999999999999988776 999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-36 Score=281.00 Aligned_cols=310 Identities=25% Similarity=0.338 Sum_probs=248.1
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++++++ ..+++++.+.|+++++||+||++++++|++|+....+.. ..|.++|+|++|+|+.+|+++..|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGD 80 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCCCC
Confidence 7899999885 338889999999999999999999999999998875542 3577899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|+......|+ + ....|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~-------~---------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~ 120 (339)
T cd08249 81 RVAGFVHGGNP-------N---------------------------------DPRNGAFQEYVVADADLTAKIPDNISFE 120 (339)
T ss_pred EEEEEeccccC-------C---------------------------------CCCCCcccceEEechhheEECCCCCCHH
Confidence 99987433221 0 0013699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCC----------CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADI----------SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~----------~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
+++.+++.+.|||+++.+..++ +++++|||+|+ |.+|++++++|+.+|+ +++++. ++++.+.++++|
T Consensus 121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g 198 (339)
T cd08249 121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG 198 (339)
T ss_pred HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence 9999999999999998666544 78999999998 9999999999999999 788876 568889999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhcc--CCccEEEeccCCCCCeeeccccccccccEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD--GWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
++++++.. ..++.+.+++++++++|++||++|++..+..+++++++ + |+++.+|...... .+ ..+.++
T Consensus 199 ~~~v~~~~--~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~-----~~~~~~ 268 (339)
T cd08249 199 ADAVFDYH--DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP-----RKGVKV 268 (339)
T ss_pred CCEEEECC--CchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC-----CCCceE
Confidence 99988876 56777788877766899999999976788999999999 8 9999998765422 11 112222
Q ss_pred EEeeecc------C---CcCCcHHHHHHHHHcCCCCCCcceeeeec--cccHHHHHHHhhcCc-ee-EEEEeC
Q 017052 317 KGSLFGG------W---KPKTDLPSLVNRYLKKEFMVDEFITHNLL--FEDINQAFNLMKEGK-CL-RSVIHM 376 (378)
Q Consensus 317 ~g~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--l~~i~~A~~~l~~~~-~~-kvvi~~ 376 (378)
....... . .....+.++++++.++.+.+.. ...++ ++++++|++.+..++ .. |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 269 KFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 1111110 0 0112466788899999887653 35566 999999999999888 65 999875
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=278.73 Aligned_cols=298 Identities=26% Similarity=0.333 Sum_probs=223.9
Q ss_pred eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCC------------CcCCCCCEEE
Q 017052 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGV------------TEFNEGEHVL 92 (378)
Q Consensus 25 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v------------~~~~~Gd~V~ 92 (378)
....+.++|.|.+++++|++.++++|+.|+.+..|.+..+. +|.++.|+|...|+++ ..+..||++.
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~-~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~ 98 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIP-LGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVV 98 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCC-CccCCCCccccccCCceeEEeccccccccceEeeeEEe
Confidence 44567889999999999999999999999999988772222 4444444444444433 2334444333
Q ss_pred eecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhh
Q 017052 93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 172 (378)
Q Consensus 93 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa 172 (378)
.. ...|+|+||+++|...++++|+++++++||
T Consensus 99 ~~------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 99 AF------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred ec------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 22 123699999999999999999999999999
Q ss_pred hhchhhhhhHHHHHhhc------CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 173 LLSCGLSAGLGAAWNVA------DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~------~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++.+..|||.++.... ++++|++|||+|+ |++|++++|+|++.|+ ..+++.+++++.++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999988 8999999999977 9999999999999996 56666699999999999999999999
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-Ceeecc-ccccccccEEEEe----
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAH-YGLFLSGRTLKGS---- 319 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~-~~~~~~~~~i~g~---- 319 (378)
+ +.++.+.++..+.++||+||||+|+. .+.....++..+ |+...++..... .+.... .+...+.+.+...
T Consensus 210 ~--~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
T KOG1198|consen 210 K--DENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG 285 (347)
T ss_pred C--CHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence 8 78999999998844999999999984 667778888876 765555443321 111111 0000111111111
Q ss_pred ----eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 320 ----LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 320 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
+.......+.+..+.+++.++++++. +.+.||++++.+|++.+.+++.. |+++++++
T Consensus 286 ~~~~~~~~~~~~~~l~~l~~~ie~gkikp~--i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 286 VNYRWLYFVPSAEYLKALVELIEKGKIKPV--IDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred cceeeeeecCCHHHHHHHHHHHHcCcccCC--cceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 00011113457788999999975554 88999999999999999997776 99998763
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=274.85 Aligned_cols=295 Identities=21% Similarity=0.311 Sum_probs=247.5
Q ss_pred eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCC
Q 017052 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECK 100 (378)
Q Consensus 25 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 100 (378)
+++++.+.|.+.+++|+|||+++++|+.|...+.|.. .+|.++|+|++|+|+++|+++..+++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 6677888888999999999999999999998876643 34578999999999999999999999999988621
Q ss_pred CCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhh
Q 017052 101 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180 (378)
Q Consensus 101 ~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~t 180 (378)
.|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 90 --------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~t 125 (323)
T cd05282 90 --------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLT 125 (323)
T ss_pred --------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHH
Confidence 148999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 181 GLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 181 a~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
||+++.....+.+|++|||+|+ |.+|++++++|+.+|+ .++++.+++++.+.++++|+++++++. ..++...+.++
T Consensus 126 a~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~ 202 (323)
T cd05282 126 AWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSS--PEDLAQRVKEA 202 (323)
T ss_pred HHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEeccc--chhHHHHHHHH
Confidence 9999888888899999999988 8999999999999999 888998999999999999999998876 45677788888
Q ss_pred hCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccc-cccEEEEeeeccCCc-------CCcH
Q 017052 260 TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKP-------KTDL 330 (378)
Q Consensus 260 ~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~~ 330 (378)
+.+ ++|+++||+|+. .....+++++++ |+++.+|..... ...++...+. ++.++.+..+..+.. .+.+
T Consensus 203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd05282 203 TGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETF 279 (323)
T ss_pred hcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHH
Confidence 877 899999999984 567889999997 999999876543 2334444444 688888776654321 1246
Q ss_pred HHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 331 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 331 ~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.++++++.++.+.+. +.+.|+++++++|++.+.+++.. |++++
T Consensus 280 ~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 280 AEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 778888989987653 56889999999999999988776 88763
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=272.74 Aligned_cols=311 Identities=17% Similarity=0.212 Sum_probs=238.3
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+.+.+ +.+++.+.|.++++||+||+.++++|++|.....+.. .+|.++|||++|+|+++| +.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 799999998864 7888999999999999999999999999986654211 348899999999999964 56799
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..+.. .|.. ..|+|+||+.++++.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~ 116 (326)
T cd08289 79 PGDEVIVTSYD-----------------------LGVS-------------------HHGGYSEYARVPAEWVVPLPKGL 116 (326)
T ss_pred CCCEEEEcccc-----------------------cCCC-------------------CCCcceeEEEEcHHHeEECCCCC
Confidence 99999876311 0100 13599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhh--cCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 167 PLEKICLLSCGLSAGLGAAWNV--ADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~--~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++++++.+++.+.|||.++... ..+ ..+++|||+|+ |.+|++++|+|+.+|+ +++++++++++.+.++++|++.+
T Consensus 117 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 195 (326)
T cd08289 117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEV 195 (326)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEE
Confidence 9999999999999999887533 233 35789999998 9999999999999999 89999999999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++.+ +. ..+.+.++..+++|++||++|+ ..+...+++++++ |+++.+|.... ...+.....+ .++.++.+...
T Consensus 196 ~~~~--~~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T cd08289 196 IPRE--EL-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGIDS 269 (326)
T ss_pred Ecch--hH-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEEe
Confidence 8775 22 3445666644489999999998 6788999999997 99999997643 2223222222 46888877653
Q ss_pred ccCCcCCcHHHHHHHHHcCCCC---CCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFM---VDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.... ......+++.+.. .+. ....+.++|+++++++|++.+.+++.. |+++++
T Consensus 270 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 270 VECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 2210 1122333333332 222 112357899999999999999988877 998864
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=271.38 Aligned_cols=309 Identities=20% Similarity=0.202 Sum_probs=248.6
Q ss_pred eeeEEeecCCCC-----eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCc
Q 017052 13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 13 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
|||+++.+++.+ +++.+.+.|.+.+++|+||+.++++|++|+..+.+.. .+|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999998864 6666788888899999999999999999988776643 25678999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||+|+..... ...|+|++|+.++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~---------------------------------------------~~~g~~~~~~~v~~~~~~~ip~ 115 (336)
T cd08252 81 FKVGDEVYYAGDI---------------------------------------------TRPGSNAEYQLVDERIVGHKPK 115 (336)
T ss_pred CCCCCEEEEcCCC---------------------------------------------CCCccceEEEEEchHHeeeCCC
Confidence 9999999865100 0125899999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCC-----CCeEEEEcc-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~-----g~~VLI~Ga-g~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~ 237 (378)
++++++++.+++.+.+||+++.+.+.+.+ |++|+|+|+ |++|++++|+|+.+| + +++++++++++.+.++++
T Consensus 116 ~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~ 194 (336)
T cd08252 116 SLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKEL 194 (336)
T ss_pred CCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhc
Confidence 99999999999999999999878888887 999999986 999999999999999 7 899999999999999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEE
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTL 316 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i 316 (378)
|++++++.. . ++.+.+.....+++|++||++|++..+..++++++.+ |+++.+|... .. ++...+ .++.++
T Consensus 195 g~~~~~~~~--~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~~--~~~~~~~~~~~~~ 266 (336)
T cd08252 195 GADHVINHH--Q-DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--EP--LDLGPLKSKSASF 266 (336)
T ss_pred CCcEEEeCC--c-cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--Cc--ccchhhhcccceE
Confidence 998888765 2 4556666443348999999999767889999999997 9999998653 22 222233 357777
Q ss_pred EEeeeccCC--c-------CCcHHHHHHHHHcCCCCCCcc-eeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 317 KGSLFGGWK--P-------KTDLPSLVNRYLKKEFMVDEF-ITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 317 ~g~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~-i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.+..+..+. . ...+.++++++.++.+.+... ....++++++++|++.+.+++.. |++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 267 HWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 665443211 0 123667889999998775311 12457999999999999988876 88764
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=270.47 Aligned_cols=308 Identities=25% Similarity=0.349 Sum_probs=245.8
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||++++.+.+.+ +++.+.+.|.+++++|+||++++++|++|+....|.. ..|.++|||++|+|+++|. ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 689999877643 6777777788999999999999999999998877643 3467899999999999995 57999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|++....- | ....|+|++|+.++.+.++++|++++
T Consensus 79 Gd~V~~~~~~~-----------------------~-------------------~~~~g~~~~~~~~~~~~~~~ip~~~~ 116 (320)
T cd08243 79 GQRVATAMGGM-----------------------G-------------------RTFDGSYAEYTLVPNEQVYAIDSDLS 116 (320)
T ss_pred CCEEEEecCCC-----------------------C-------------------CCCCcccceEEEcCHHHcEeCCCCCC
Confidence 99998762100 0 00125999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+++++.+++++.+||+++.+...+++|++|||+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++++++.
T Consensus 117 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~- 194 (320)
T cd08243 117 WAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID- 194 (320)
T ss_pred HHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-
Confidence 99999999999999999877788999999999998 9999999999999999 79999999999999999999887753
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCee----eccccccccccEEEEeeec
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV----AAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~i~g~~~~ 322 (378)
..++.+.++++ ++++|+++|++|+ ..+...+++++++ |+++.+|........ ......+.++.++.+....
T Consensus 195 --~~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (320)
T cd08243 195 --DGAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSG 269 (320)
T ss_pred --CccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchh
Confidence 33666777777 4489999999997 6788999999997 999999875432111 1111112346666555432
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
... ...+.++++++..+.+++. +.+.++++++++|++.+.+++.. |+++
T Consensus 270 ~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 270 DVP-QTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhh-HHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 211 1347778889989987653 56789999999999999887766 8775
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=265.56 Aligned_cols=298 Identities=25% Similarity=0.389 Sum_probs=240.1
Q ss_pred cCCCCeEEEEeecCCCCCCcEEEEEeEEecCccccccc-ccCC-----CCCcccccceeEEEEEeCCCCCcCCCCCEEEe
Q 017052 20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93 (378)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~-----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 93 (378)
+.+. +++.+.+.|+++++||+||+.++++|++|+..+ .|.. .+|.++|+|++|+|+++|+.+..+++||+|+.
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 899999999999999999999999999998876 5542 13678999999999999999999999999987
Q ss_pred ecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhh
Q 017052 94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 173 (378)
Q Consensus 94 ~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~ 173 (378)
.. .|+|++|+.++.+.++++|+++ ..++.
T Consensus 82 ~~-------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~ 110 (312)
T cd08269 82 LS-------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAF 110 (312)
T ss_pred ec-------------------------------------------------CCcceeeEEEchhheEECCCch--hhhHH
Confidence 61 2489999999999999999998 23332
Q ss_pred hchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHH
Q 017052 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253 (378)
Q Consensus 174 ~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~ 253 (378)
...+++++++++. ..+++++++|||+|+|.+|++++|+|+.+|++.++++.+++++.++++++|++++++.+ ..++.
T Consensus 111 ~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~ 187 (312)
T cd08269 111 PGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD--SEAIV 187 (312)
T ss_pred hhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC--CcCHH
Confidence 2267889999874 88899999999998899999999999999994399999999999999999998888765 56777
Q ss_pred HHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccCC-cCCcH
Q 017052 254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWK-PKTDL 330 (378)
Q Consensus 254 ~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~-~~~~~ 330 (378)
+.+.+++.+ ++|+++||+|+.......+++++++ |+++.+|.... ....+.+. ...++.++.++...... ..+.+
T Consensus 188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (312)
T cd08269 188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQD-GPRPVPFQTWNWKGIDLINAVERDPRIGLEGM 265 (312)
T ss_pred HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CCcccCHHHHhhcCCEEEEecccCccchhhHH
Confidence 888888776 8999999998767788999999997 99999986542 22222221 12446666555432221 12468
Q ss_pred HHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCce--eEEEE
Q 017052 331 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVI 374 (378)
Q Consensus 331 ~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~--~kvvi 374 (378)
+++++++.++.+.+...+.+.|+++++++|++.+++++. +|+++
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 266 REAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 889999999998764445688999999999999988865 48886
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=267.11 Aligned_cols=308 Identities=20% Similarity=0.240 Sum_probs=239.8
Q ss_pred eeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||+++.+.+.| +++++.|.|.+++++|+||++++++|++|+..+.|.. ..|..+|||++|+|++ .++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 68888888875 7889999999999999999999999999998887753 3478899999999998 45678999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|+...... |.. ..|+|++|+.++.+.++++|++++
T Consensus 79 Gd~V~~~~~~~-----------------------~~~-------------------~~g~~~~~~~~~~~~~~~iP~~~~ 116 (323)
T TIGR02823 79 GDEVIVTGYGL-----------------------GVS-------------------HDGGYSQYARVPADWLVPLPEGLS 116 (323)
T ss_pred CCEEEEccCCC-----------------------CCC-------------------CCccceEEEEEchhheEECCCCCC
Confidence 99998763110 000 125999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHh--hcCCCCCC-eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 168 LEKICLLSCGLSAGLGAAWN--VADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~--~~~~~~g~-~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
+++++.+++.+.+||.++.. .+++.+|+ +|||+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++.++
T Consensus 117 ~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~ 195 (323)
T TIGR02823 117 LREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVI 195 (323)
T ss_pred HHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEE
Confidence 99999999999999988643 34488898 9999998 9999999999999999 788888888888999999998888
Q ss_pred CCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeec
Q 017052 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG 322 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 322 (378)
+.. +.+. .++.+..+++|+++||+|+ ..+...+++++++ |+++.+|.... ....+....+ .++.++.+....
T Consensus 196 ~~~--~~~~--~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 268 (323)
T TIGR02823 196 DRE--DLSP--PGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSV 268 (323)
T ss_pred ccc--cHHH--HHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEecc
Confidence 764 2222 4445544479999999997 4788899999997 99999997643 2222222222 567888776543
Q ss_pred cCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 323 GWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 323 ~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.... ...+..+.+++..+.+.. . .+.|+++++++|++.+.+++.. |+++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 269 YCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred ccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 2110 012445556666776543 2 4689999999999999988877 998863
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=273.43 Aligned_cols=308 Identities=25% Similarity=0.296 Sum_probs=238.8
Q ss_pred eeeEEeecCCCC---eEEEEeecCCC-CCCcEEEEEeEEecCcccccccccC------------------CCCCcccccc
Q 017052 13 CKAAVAWGAGQP---LVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQ------------------AIFPRIFGHE 70 (378)
Q Consensus 13 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~------------------~~~p~~~G~e 70 (378)
|||++++++++| +++.+.++|.| +++||+|||+++++|++|+..+.|. ..+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999998876 88899999998 4999999999999999999887663 1457799999
Q ss_pred eeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceee
Q 017052 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (378)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 150 (378)
++|+|+++|+++.+|++||+|+..+.. +..|+|++
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~---------------------------------------------~~~g~~~~ 115 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP---------------------------------------------WSQGTHAE 115 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC---------------------------------------------CCCcccee
Confidence 999999999999999999999876311 01259999
Q ss_pred EEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCC----CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISK----GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 151 ~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~----g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
|+.++.+.++++|+++++++++.+++.+.+||+++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ +++++.
T Consensus 116 ~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~ 194 (350)
T cd08248 116 YVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTC 194 (350)
T ss_pred EEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEe
Confidence 9999999999999999999999999999999999877777654 999999997 9999999999999999 788776
Q ss_pred CChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe--e
Q 017052 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--V 303 (378)
Q Consensus 226 ~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~ 303 (378)
++ ++.+.++++|.+.+++.. ..++.+.+... +++|++||++|+. ....++++++++ |+++.+|....... .
T Consensus 195 ~~-~~~~~~~~~g~~~~~~~~--~~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~ 267 (350)
T cd08248 195 ST-DAIPLVKSLGADDVIDYN--NEDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDKL 267 (350)
T ss_pred Cc-chHHHHHHhCCceEEECC--ChhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCcccccccc
Confidence 54 678888999998888765 34455544432 3799999999985 788999999997 99999986532111 1
Q ss_pred ecc--c----ccccc-ccE-E-EEe---eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-
Q 017052 304 AAH--Y----GLFLS-GRT-L-KGS---LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL- 370 (378)
Q Consensus 304 ~~~--~----~~~~~-~~~-i-~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~- 370 (378)
.+. + ..+.. ... + ... +.........+.++++++.++.+.+. +.+.|+++++++|++.+.+++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~ 345 (350)
T cd08248 268 GLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPV--IDKVFPFEEVPEAYEKVESGHARG 345 (350)
T ss_pred cccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecc--cceeecHHHHHHHHHHHhcCCCce
Confidence 110 0 00000 000 0 000 00001112458889999999987543 56889999999999999887765
Q ss_pred EEEEe
Q 017052 371 RSVIH 375 (378)
Q Consensus 371 kvvi~ 375 (378)
|++++
T Consensus 346 ~vv~~ 350 (350)
T cd08248 346 KTVIK 350 (350)
T ss_pred EEEeC
Confidence 88763
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=248.53 Aligned_cols=296 Identities=20% Similarity=0.221 Sum_probs=240.7
Q ss_pred eEEEEeecCCCCCCcEEEEEeEEecCcccccccccC--CCCCcccccceeEEEEEeC--CCCCcCCCCCEEEeecccCCC
Q 017052 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--AIFPRIFGHEASGIVESVG--PGVTEFNEGEHVLTVFIGECK 100 (378)
Q Consensus 25 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~~~ 100 (378)
+++++.++|+|+++|||||..|.++++.-...+... +-.|+-+|...+|.++... ++...|++||.|...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~------ 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV------ 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec------
Confidence 999999999999999999999999998433222221 1457777766655544432 567889999999876
Q ss_pred CCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhh--hhhchhh
Q 017052 101 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI--CLLSCGL 178 (378)
Q Consensus 101 ~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a--a~~~~~~ 178 (378)
.+|+||..++.+.+.|++.+.-+..+ ..+..+.
T Consensus 101 ---------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG 135 (340)
T COG2130 101 ---------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPG 135 (340)
T ss_pred ---------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCch
Confidence 28999999999999999866433332 3466688
Q ss_pred hhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHH
Q 017052 179 SAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVI 256 (378)
Q Consensus 179 ~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i 256 (378)
.|||.+|.+....++|++|+|.|| |++|..+.|+||..|+ +|+++..+++|..++++ +|.+..+||+ .+++.+.+
T Consensus 136 ~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk--~~d~~~~L 212 (340)
T COG2130 136 LTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK--AEDFAQAL 212 (340)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecC--cccHHHHH
Confidence 999999999999999999999988 9999999999999999 99999999999999998 9999999998 67999999
Q ss_pred HHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe--eecccc----ccccccEEEEeeecc-CCc--C
Q 017052 257 KRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--VAAHYG----LFLSGRTLKGSLFGG-WKP--K 327 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~----~~~~~~~i~g~~~~~-~~~--~ 327 (378)
++.++.++|+.||++|+ ..+...+..|+.. +|++.+|..+.... .+..+. .+.+.+++.|+.... +.. .
T Consensus 213 ~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~ 290 (340)
T COG2130 213 KEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFP 290 (340)
T ss_pred HHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhH
Confidence 99999999999999999 7999999999996 99999997654322 222222 223477888988732 222 2
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
+..+++.+|+.+|+|+.+. +-+-.++.+++||..|-+++.. |.|+++.+
T Consensus 291 e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 291 EALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 4567899999999999884 3445799999999999999887 99999864
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=265.47 Aligned_cols=302 Identities=19% Similarity=0.202 Sum_probs=240.3
Q ss_pred eeeEEeecCCC------CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--C----CCcccccceeEEEEEeCC
Q 017052 13 CKAAVAWGAGQ------PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--I----FPRIFGHEASGIVESVGP 80 (378)
Q Consensus 13 ~~a~~~~~~~~------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~----~p~~~G~e~~G~V~~vG~ 80 (378)
.|||++.+.++ .+++++.+.|++.+++|+||+.++++|+.|.....+.. . .+.++|+|++|+|+++|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46777766552 28899999999999999999999999997765444421 1 245789999999999996
Q ss_pred CCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeC-Cce
Q 017052 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA 159 (378)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~ 159 (378)
. +|++||+|+.. ++|++|+.++. +.+
T Consensus 82 ~--~~~~Gd~V~~~---------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 82 P--DFKVGDLVSGF---------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred C--CCCCCCEEecc---------------------------------------------------cceEEEEEecchhhc
Confidence 4 79999999865 37999999999 999
Q ss_pred eeCCCCCC--hhhhhh-hchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 160 VKVSSIAP--LEKICL-LSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 160 ~~iP~~l~--~~~aa~-~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
+++|++++ +++++. +++++.|||+++.+...+.++++|||+|+ |.+|++++|+|+.+|+ +++++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999995 555555 88899999999877788999999999986 9999999999999999 8999999999999998
Q ss_pred h-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeee----c-cccc
Q 017052 236 A-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA----A-HYGL 309 (378)
Q Consensus 236 ~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~-~~~~ 309 (378)
+ +|++++++++ +.++.+.+.+++.+++|++|||+|+ ..+..++++++++ |+++.+|......... + ....
T Consensus 188 ~~~g~~~~~~~~--~~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd05288 188 EELGFDAAINYK--TPDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNI 263 (329)
T ss_pred hhcCCceEEecC--ChhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHH
Confidence 8 9998888876 4567777777765589999999997 6788999999997 9999998654322111 1 2223
Q ss_pred cccccEEEEeeeccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 310 FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 310 ~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
+.++.++.+..+..... .+.+.++++++.++.+++.. ...+++++++++++.+.+++.. |+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 35577777765432211 13467788999999887653 3568999999999999887765 7763
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=260.71 Aligned_cols=306 Identities=25% Similarity=0.343 Sum_probs=250.0
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+.+.+ +++.+.+.|.+.+++++||+.++++|+.|+....|.. .+|.++|||++|+|+++|+.+..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999986654 7788888888899999999999999999998876643 3467899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+.... .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (323)
T cd05276 81 VGDRVCALLA------------------------------------------------GGGYAEYVVVPAGQLLPVPEGL 112 (323)
T ss_pred CCCEEEEecC------------------------------------------------CCceeEEEEcCHHHhccCCCCC
Confidence 9999987610 1489999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.++..+.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +++++++++++.+.++++|.+.+++.
T Consensus 113 ~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd05276 113 SLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINY 191 (323)
T ss_pred CHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999877788999999999997 9999999999999999 79999999999999999998888776
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (378)
. ..++.+.+.+...+ ++|+++|++|+. .....+.++.++ |+++.+|...... .......+ .++.++.++....
T Consensus 192 ~--~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05276 192 R--TEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLRS 266 (323)
T ss_pred C--chhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeeccc
Confidence 5 45677777777766 899999999974 577889999996 9999998654321 22222222 4678887776543
Q ss_pred CCc--C-----CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 324 WKP--K-----TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 324 ~~~--~-----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
... + ..+.++++++.++.+.+. ..+.|+++++++|++.+.+++.. |+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 267 RSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred hhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 211 0 124567788888887543 56889999999999999887765 7763
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=260.98 Aligned_cols=313 Identities=22% Similarity=0.324 Sum_probs=250.5
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
||++++...+.+ +++.+.+.|.+.+++++|++.++++|++|+....|.. ..|.++|||++|+|+++|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888876644 8888899999999999999999999999998876643 4567899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..... ..+ ..|++++|+.++.+.++++|+++
T Consensus 81 ~Gd~v~~~~~~----------------------------~~~---------------~~g~~~~~~~~~~~~~~~ip~~~ 117 (325)
T cd08253 81 VGDRVWLTNLG----------------------------WGR---------------RQGTAAEYVVVPADQLVPLPDGV 117 (325)
T ss_pred CCCEEEEeccc----------------------------cCC---------------CCcceeeEEEecHHHcEeCCCCC
Confidence 99999887311 000 12589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.+++++.+||+++.+...+.+|++|+|+|+ |.+|++++++++..|+ +++++++++++.+.++++|++.+++.
T Consensus 118 ~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (325)
T cd08253 118 SFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNY 196 (325)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999877789999999999987 9999999999999999 89999999999999999999888876
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
. ..++.+.+.++..+ ++|+++|++++ ......+++++.+ |+++.++.......+.+.. .+.++.++.+......
T Consensus 197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 271 (325)
T cd08253 197 R--AEDLADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLRGTIPINP-LMAKEASIRGVLLYTA 271 (325)
T ss_pred C--CcCHHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCcCCCChhH-HHhcCceEEeeehhhc
Confidence 5 45677777777666 89999999988 4677888999997 9999998754222222222 1344666665543221
Q ss_pred Cc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 325 KP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 325 ~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.. .+.+..+.+++..+.+++. ..+.|++++++++++.+.++... |+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 272 TPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 11 1224456667777776543 56889999999999999987776 988763
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=262.08 Aligned_cols=308 Identities=23% Similarity=0.275 Sum_probs=249.5
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+++.+ +++++.+.|.+.+++|+|++.++++|++|+....+.. ..|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 799999988865 7788888888999999999999999999998876643 2367899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..... + . ...|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~-------------------------~--~----------------~~~g~~~~~~~v~~~~~~~~p~~~ 117 (326)
T cd08272 81 VGDEVYGCAGG-------------------------L--G----------------GLQGSLAEYAVVDARLLALKPANL 117 (326)
T ss_pred CCCEEEEccCC-------------------------c--C----------------CCCCceeEEEEecHHHcccCCCCC
Confidence 99999876210 0 0 012589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.++..+.+||+++.+...+++|++++|+|+ |.+|++++++|+.+|+ ++++++++ ++.+.++++|.+.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~ 195 (326)
T cd08272 118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYY 195 (326)
T ss_pred CHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEec
Confidence 999999999999999999888899999999999986 9999999999999999 88888888 88899999999888776
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeecc-
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG- 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~- 323 (378)
. .. +...+.+++.+ ++|+++|++++ ......+.+++++ |+++.++... .. .+.... .+++++.+..+..
T Consensus 196 ~--~~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~-~~--~~~~~~-~~~~~~~~~~~~~~ 266 (326)
T cd08272 196 R--ET-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA-TH--DLAPLS-FRNATYSGVFTLLP 266 (326)
T ss_pred c--hh-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC-cc--chhhHh-hhcceEEEEEcccc
Confidence 5 34 77778888777 89999999998 5678899999996 9999998663 11 222222 3566666554321
Q ss_pred ----CC---cCCcHHHHHHHHHcCCCCCCccee-eeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 ----WK---PKTDLPSLVNRYLKKEFMVDEFIT-HNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ----~~---~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.. ..+.+.++++++.++.+... ++ +.|++++++++++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 267 LLTGEGRAHHGEILREAARLVERGQLRPL--LDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cccccchhhHHHHHHHHHHHHHCCCcccc--cccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 00 01346678888888886543 34 789999999999999887766 998864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-33 Score=260.66 Aligned_cols=309 Identities=16% Similarity=0.196 Sum_probs=241.6
Q ss_pred eeeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.++|. .+++++.+.|.|+++||+||+.++++|++|.....|.. .+|.++|||++|+|++ +++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 79999999885 38899999999999999999999999999998876643 3477899999999998 6677899
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|++..... | ....|+|++|+.++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~~-----------------------~-------------------~~~~g~~~~~~~v~~~~~~~lp~~~ 116 (324)
T cd08288 79 PGDRVVLTGWGV-----------------------G-------------------ERHWGGYAQRARVKADWLVPLPEGL 116 (324)
T ss_pred CCCEEEECCccC-----------------------C-------------------CCCCCcceeEEEEchHHeeeCCCCC
Confidence 999998752100 0 0013589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHH--hhcCCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 167 PLEKICLLSCGLSAGLGAAW--NVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~--~~~~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++++++.++..+++++.++. +..+.. ++++|||+|+ |.+|++++|+|+.+|+ ++++++.++++.+.++++|++++
T Consensus 117 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 195 (324)
T cd08288 117 SARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEI 195 (324)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEE
Confidence 99999999999999987753 234455 6789999998 9999999999999999 79998899999999999999998
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++++ + ....++.+..+++|.++|++++ ..+...+..++.+ |+++.+|.... .........+ .++.++.+...
T Consensus 196 ~~~~--~--~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08288 196 IDRA--E--LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDS 268 (324)
T ss_pred EEcc--h--hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEe
Confidence 8775 2 2224555555578999999997 4667888888886 99999987532 1122222333 56888887653
Q ss_pred ccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..... .+.+..+.+++..+.+.+ +.+.++++++++|++.+++++.. |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 269 VMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred ecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 32111 123555667777777643 35889999999999999988877 998864
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=258.44 Aligned_cols=307 Identities=25% Similarity=0.302 Sum_probs=249.4
Q ss_pred eeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
||+....++.+ +.+.+.+.+.+++++++|+|.++++|++|+....+.. .+|.++|||++|+|+.+|+++.+|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGD 80 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCCCCCccCCcceeEEEEEECCCCCCCCCCC
Confidence 46777666654 6677777777899999999999999999998877654 3566899999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|++.. ..|+|++|+.++.+.++++|++++++
T Consensus 81 ~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~ 112 (320)
T cd05286 81 RVAYAG------------------------------------------------PPGAYAEYRVVPASRLVKLPDGISDE 112 (320)
T ss_pred EEEEec------------------------------------------------CCCceeEEEEecHHHceeCCCCCCHH
Confidence 998761 01489999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
+++.++....++|+++.+..++++|++|||+|+ |.+|++++++|+.+|+ .++++++++++.+.++++|++.+++..
T Consensus 113 ~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~-- 189 (320)
T cd05286 113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR-- 189 (320)
T ss_pred HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--
Confidence 999999999999999888889999999999997 9999999999999999 899999999999999999998888765
Q ss_pred CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCc
Q 017052 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKP 326 (378)
Q Consensus 249 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~ 326 (378)
..++.+.+..++.+ ++|+++||+++ .....++++++++ |+++.+|..... ...++...+ .+++++.+........
T Consensus 190 ~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (320)
T cd05286 190 DEDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIA 266 (320)
T ss_pred chhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcC
Confidence 45677778887766 89999999998 5788999999997 999999875432 222233322 4566665443322111
Q ss_pred -----CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 327 -----KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 327 -----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+.+.++++++.++.+.+. +.+.|+++++++|++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 267 TREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred CHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1224567888888887654 56789999999999999988776 888753
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-33 Score=262.50 Aligned_cols=313 Identities=18% Similarity=0.255 Sum_probs=235.1
Q ss_pred eeeEEeecCCCCeEEEEeecCCC---CCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC-c
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP---QPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT-E 84 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~-~ 84 (378)
.|+++++++++++++++++.|.| ++++|+||+.++++|++|+..+.+.. ..|.++|+|++|+|+++|+++. .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 37899999998888888777765 89999999999999999988765432 1377899999999999999998 8
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC----cee
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG----CAV 160 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~ 160 (378)
|++||+|++.....|. ..|+|++|++++.. .++
T Consensus 81 ~~~Gd~V~~~~~~~~~-------------------------------------------~~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 81 WKVGDEVCGIYPHPYG-------------------------------------------GQGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCCEEEEeecCCCC-------------------------------------------CCceeeEEEEEccccccceeE
Confidence 9999999876322110 12599999999987 799
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhc-CCCCCCeEEEEcc-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhC
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVA-DISKGSTVVIFGL-GTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~-~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~ 237 (378)
++|+++++++++.++..+.|||+++.+.. .+++|++|+|+|+ |.+|++++|+|+.+|. +.++++. ++++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999986666 7999999999988 8999999999998754 3566665 45556677889
Q ss_pred CCcEEeCCCCCCch---HHHHH-HHHhCC-CccEEEeccCChHHHHHHHHHhc---cCCccEEEeccCCCCC--ee----
Q 017052 238 GVTEFLNPNDNNEP---VQQVI-KRITDG-GADYSFECIGDTGMITTALQSCC---DGWGLAVTLGVPKLKP--EV---- 303 (378)
Q Consensus 238 g~~~vi~~~~~~~~---~~~~i-~~~~~~-~~d~vid~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~--~~---- 303 (378)
|++++++.++ .+ +...+ +..+++ ++|++|||+|+......++++++ ++ |+++.++...... ..
T Consensus 197 g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~ 273 (352)
T cd08247 197 GADHFIDYDA--HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNS 273 (352)
T ss_pred CCCEEEecCC--CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhh
Confidence 9999888752 23 33344 444424 89999999998667788899999 97 9999874222110 00
Q ss_pred ----ecccccccccc-----EEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEE
Q 017052 304 ----AAHYGLFLSGR-----TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSV 373 (378)
Q Consensus 304 ----~~~~~~~~~~~-----~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvv 373 (378)
.+....+.++. .+..... ... .+.+.++++++.++.+++. +.+.++++++++|++.+++++.. |++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvv 349 (352)
T cd08247 274 WDNPSANARKLFGSLGLWSYNYQFFLL-DPN-ADWIEKCAELIADGKVKPP--IDSVYPFEDYKEAFERLKSNRAKGKVV 349 (352)
T ss_pred ccccchhhhhhhhhhcCCCcceEEEEe-cCC-HHHHHHHHHHHhCCCeEee--eccEecHHHHHHHHHHHHcCCCCCcEE
Confidence 01111111222 2211111 110 1346778889989886543 56889999999999999988776 998
Q ss_pred EeC
Q 017052 374 IHM 376 (378)
Q Consensus 374 i~~ 376 (378)
+++
T Consensus 350 i~~ 352 (352)
T cd08247 350 IKV 352 (352)
T ss_pred EeC
Confidence 864
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=257.10 Aligned_cols=307 Identities=24% Similarity=0.303 Sum_probs=244.6
Q ss_pred eeeEEeecCC--CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
|||+++.+++ ..+++.+.+.|++.+++++||+.++++|++|+....+.. .+|.++|||++|+|+.+|+.+..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999999 359999999999999999999999999999988776643 23678999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|....... ..|+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~---------------------------------------------~~~~~~s~~~~~~~~~~~ip~~~~ 115 (325)
T cd08271 81 GDRVAYHASLA---------------------------------------------RGGSFAEYTVVDARAVLPLPDSLS 115 (325)
T ss_pred CCEEEeccCCC---------------------------------------------CCccceeEEEeCHHHeEECCCCCC
Confidence 99998762100 125899999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+.+++.+.+.+.+||+++.+...+++|++|+|+|+ |.+|++++++|+..|+ .++++. ++++.+.++.+|++.+++..
T Consensus 116 ~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~ 193 (325)
T cd08271 116 FEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYN 193 (325)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCC
Confidence 99999999999999999888888999999999998 8899999999999999 777776 67788888889998888765
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeee----
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF---- 321 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~---- 321 (378)
..++.+.++++..+ ++|++++++++. .....+++++++ |+++.++...... .. ..+..+..+....+
T Consensus 194 --~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~ 265 (325)
T cd08271 194 --DEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDAS--PD--PPFTRALSVHEVALGAAH 265 (325)
T ss_pred --CccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCc--ch--hHHhhcceEEEEEecccc
Confidence 45677778877766 899999999984 456789999997 9999987543321 11 11112233222211
Q ss_pred -ccC-----CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 322 -GGW-----KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 322 -~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
... ...+.+.++++++.++.+.+. ..+.|+++++.+|++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 266 DHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 110 001234668888888887543 45789999999999999987776 988864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=258.22 Aligned_cols=302 Identities=21% Similarity=0.276 Sum_probs=237.7
Q ss_pred eeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||+++...+.+ +++++.+.|.|.+++++||+.++++|++|..++.|.. .+|.++|||++|+|+++|+++..|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78999988765 8888889999999999999999999999998877653 34668999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|++... .|+|++|+.++.+.++++|++++
T Consensus 82 Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~ 113 (331)
T cd08273 82 GDRVAALTR------------------------------------------------VGGNAEYINLDAKYLVPVPEGVD 113 (331)
T ss_pred CCEEEEeCC------------------------------------------------CcceeeEEEechHHeEECCCCCC
Confidence 999988621 14899999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+++++.+++.+.+||+++.+...+.+|++|+|+|+ |.+|++++++|+.+|+ +++++.. +++.+.++++|+.. ++..
T Consensus 114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~ 190 (331)
T cd08273 114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR 190 (331)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC
Confidence 99999999999999999877788999999999997 9999999999999999 8888877 88899999999754 3433
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecc--c-------------cccc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH--Y-------------GLFL 311 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~-------------~~~~ 311 (378)
..++... ....+++|+++|++|+. .+..++++++.+ |+++.+|.........+. + ..+.
T Consensus 191 --~~~~~~~--~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (331)
T cd08273 191 --TKDWLPA--MLTPGGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTG 264 (331)
T ss_pred --Ccchhhh--hccCCCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceecc
Confidence 2233333 23334899999999985 488899999997 999999876543221111 1 1111
Q ss_pred cccEEEEeeeccC-C---cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 312 SGRTLKGSLFGGW-K---PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 312 ~~~~i~g~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
...++........ . ..+.+.++++++.++.+... +.+.++++++++|++.+.+++.. |+|+
T Consensus 265 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 265 RRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK--IAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 1223322221100 0 12357788899999987643 56889999999999999887776 7775
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=251.61 Aligned_cols=312 Identities=24% Similarity=0.354 Sum_probs=248.9
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+.+.+ +++.+.+.|.+.+++++|+|.++++|+.|+....+.. .+|.++|||++|+|+.+|+.+..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 688999876643 7777888888999999999999999999998876643 2367899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+.++...+ ...|++++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~ 117 (328)
T cd08268 81 VGDRVSVIPAADL-------------------------------------------GQYGTYAEYALVPAAAVVKLPDGL 117 (328)
T ss_pred CCCEEEecccccc-------------------------------------------CCCccceEEEEechHhcEeCCCCC
Confidence 9999988632110 012589999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++++.+++.+.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+ +++.++++.++.+.++++|.+.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (328)
T cd08268 118 SFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVT 196 (328)
T ss_pred CHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEec
Confidence 999999999999999999878888999999999998 9999999999999999 89999899999999988998888776
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 323 (378)
+ ...+.+.+.+...+ ++|++++++++ .....++.+++++ |+++.+|..... ...+... .+.++.++.+..+..
T Consensus 197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 271 (328)
T cd08268 197 D--EEDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLDE 271 (328)
T ss_pred C--CccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEeccc
Confidence 5 45677777777766 89999999998 6778889999997 999999865432 1222222 345677777665432
Q ss_pred CC-cCCc----HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 324 WK-PKTD----LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 324 ~~-~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.. .... +..+.+++..+.+... ....|++++++++++.+.+++.. |++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 272 ITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 11 0112 3344455666765543 45789999999999999887776 88875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=249.78 Aligned_cols=265 Identities=31% Similarity=0.468 Sum_probs=217.9
Q ss_pred cEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcc
Q 017052 39 EIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE 114 (378)
Q Consensus 39 evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~ 114 (378)
||+|+|.++++|+.|+..+.|.. .+|.++|+|++|+|+++|+.+..|++||+|+..+..+|+.|..|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 68999999999999998887753 3478899999999999999999999999999999999999999997 565
Q ss_pred cccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCC
Q 017052 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKG 194 (378)
Q Consensus 115 ~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g 194 (378)
...... ....|+|++|+.++.+.++++|+++++++++.++..+.+||+++.....++++
T Consensus 77 ~~~~~~---------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~ 135 (271)
T cd05188 77 GGGILG---------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPG 135 (271)
T ss_pred CCCEec---------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCC
Confidence 554321 11236999999999999999999999999999999999999998777777999
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 273 (378)
++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|.+.+++.. ..++.+.+. ...+ ++|+++|++++
T Consensus 136 ~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~-~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 136 DTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR-LTGGGGADVVIDAVGG 211 (271)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH-HhcCCCCCEEEECCCC
Confidence 999999985599999999999998 899999999999999999988888775 445555555 4444 89999999998
Q ss_pred hHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcHHHHHHH
Q 017052 274 TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336 (378)
Q Consensus 274 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 336 (378)
......++++++++ |+++.++..............+.+++++.++....+ .++++++++
T Consensus 212 ~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred HHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 56788899999997 999999877654333323334456888888775432 345666554
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-32 Score=250.20 Aligned_cols=308 Identities=24% Similarity=0.331 Sum_probs=250.1
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+.+.+++.+ +++.+.+.|.+++++++||+.++++|+.|+....+.. .+|.++|||++|+|+.+|+.+..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 688888877665 6666777677899999999999999999988876643 2357899999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+... . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~-------------------------------~-----------------~~~~~~~~~~~~~~~~~ip~~~ 112 (325)
T TIGR02824 81 VGDRVCALV-------------------------------A-----------------GGGYAEYVAVPAGQVLPVPEGL 112 (325)
T ss_pred CCCEEEEcc-------------------------------C-----------------CCcceeEEEecHHHcEeCCCCC
Confidence 999998751 0 1489999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++.+++.++..+.++|+++.+...++++++|+|+|+ |.+|++++++|+.+|+ +++++.+++++.+.++.+|.+.+++.
T Consensus 113 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
T TIGR02824 113 SLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINY 191 (325)
T ss_pred CHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999999878889999999999997 9999999999999999 89999899999999999998877766
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 323 (378)
. ..++...+.....+ ++|+++|++|+ ......+.+++++ |+++.+|....... .+....+ .++.++.+.....
T Consensus 192 ~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T TIGR02824 192 R--EEDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRA 266 (325)
T ss_pred C--chhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhh
Confidence 5 45677777777766 89999999997 5778899999997 99999987542211 3333332 5688888776543
Q ss_pred CCc-------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKP-------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
... ...+.++++++.++.+.+. +.+.+++++++++++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 267 RPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred cchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 111 1123557778888876543 56789999999999999887766 888763
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-32 Score=249.50 Aligned_cols=289 Identities=25% Similarity=0.377 Sum_probs=232.8
Q ss_pred cCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCccccc
Q 017052 32 VNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKS 107 (378)
Q Consensus 32 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~ 107 (378)
.|++.+++++||+.++++|+.|+....+.+ .+|.++|+|++|+|+++|+.+.+|++||+|+.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 477889999999999999999998877653 347789999999999999999999999999876210
Q ss_pred CCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHh
Q 017052 108 DKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187 (378)
Q Consensus 108 ~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~ 187 (378)
..|+|++|+.++.+.++++|+++++++++.++..+.+||+++ +
T Consensus 72 ------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~ 114 (303)
T cd08251 72 ------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-A 114 (303)
T ss_pred ------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-H
Confidence 125899999999999999999999999999999999999997 5
Q ss_pred hcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-Ccc
Q 017052 188 VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GAD 265 (378)
Q Consensus 188 ~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d 265 (378)
...+++|++|+|+|+ |.+|++++|+|+.+|+ +++++.+++++.+.++++|++.+++.. ..++.+.+.+++++ ++|
T Consensus 115 ~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~~~d 191 (303)
T cd08251 115 RAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLTGGRGVD 191 (303)
T ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHcCCCCce
Confidence 788999999999976 9999999999999999 899999999999999999999888776 55677788888776 899
Q ss_pred EEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC---Cc---CCcHHHHHHHHHc
Q 017052 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW---KP---KTDLPSLVNRYLK 339 (378)
Q Consensus 266 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~---~~~~~~~~~~~~~ 339 (378)
+++|++++ ......+++++++ |+++.+|.........+....+.++..+....+... .. .+.+.++++++.+
T Consensus 192 ~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (303)
T cd08251 192 VVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEE 269 (303)
T ss_pred EEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHC
Confidence 99999976 6778899999997 999999865432222222222233443333222111 00 1236678888888
Q ss_pred CCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 340 KEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 340 ~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
+.++.. ..+.|++++++++++.+.+++.. |+++
T Consensus 270 g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 270 GELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 887643 56889999999999999988766 7764
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-31 Score=244.78 Aligned_cols=307 Identities=21% Similarity=0.327 Sum_probs=241.5
Q ss_pred eeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 14 KAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 14 ~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
||+.+...+. .+.+++.+.|.+++++++||+.++++|++|...+.|.. ..|.++|||++|+|+.+|+.+.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4666666554 37777888888999999999999999999998877653 23668999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||+|+.... .|+|++|+.++.+.++++|++++
T Consensus 81 G~~V~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~~ 112 (337)
T cd08275 81 GDRVMGLTR------------------------------------------------FGGYAEVVNVPADQVFPLPDGMS 112 (337)
T ss_pred CCEEEEecC------------------------------------------------CCeeeeEEEecHHHeEECCCCCC
Confidence 999987621 14899999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++.+++.+.++|+++.+...+++|++|+|+|+ |.+|++++++|+.+ +. .++.. .++++.+.++.+|++.+++.
T Consensus 113 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~ 190 (337)
T cd08275 113 FEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDY 190 (337)
T ss_pred HHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeC
Confidence 99999999999999999888889999999999998 99999999999998 33 33322 34567888888999888876
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC--eeec-------------c-ccc
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EVAA-------------H-YGL 309 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~~~-------------~-~~~ 309 (378)
. ..++.+.++..+.+++|+++|++|+ ......+++++++ |+++.+|...... .... . ...
T Consensus 191 ~--~~~~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (337)
T cd08275 191 R--TQDYVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKL 266 (337)
T ss_pred C--CCcHHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHH
Confidence 5 4567777877775589999999997 4678899999997 9999998654321 1110 0 122
Q ss_pred cccccEEEEeeeccCCc-C----CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 310 FLSGRTLKGSLFGGWKP-K----TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 310 ~~~~~~i~g~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.++.++.+..+..... . ..+.++++++.++.+.+. ..+.|++++++++++.+.+++.. |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 267 ISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred hhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 34577777765432111 1 125678888888886544 56889999999999999988776 998864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=246.58 Aligned_cols=298 Identities=23% Similarity=0.334 Sum_probs=238.0
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCc
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
|||+++..++.. +++.+.+.|.+++++|+||+.++++|+.|+..+.|.. .+|..+|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 789999887754 5667777788999999999999999999998876642 34788999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
+++||+|+.....+ ..|+|++|+.++.+.++++|+
T Consensus 81 ~~~G~~V~~~~~~~---------------------------------------------~~g~~~~~~~~~~~~~~~~p~ 115 (309)
T cd05289 81 FKVGDEVFGMTPFT---------------------------------------------RGGAYAEYVVVPADELALKPA 115 (309)
T ss_pred CCCCCEEEEccCCC---------------------------------------------CCCcceeEEEecHHHhccCCC
Confidence 99999998762110 025899999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
++++++++.+++.+.++|+++.+...+.+|++|+|+|+ |.+|++++++|+..|+ +++++..++ +.+.++++|.+.++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~ 193 (309)
T cd05289 116 NLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVI 193 (309)
T ss_pred CCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEE
Confidence 99999999999999999999877777999999999997 9999999999999999 788887777 88888899988877
Q ss_pred CCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeec
Q 017052 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
+.. ..++.+ ...+ ++|+++|++|+. ....++.+++++ |+++.+|....... ..+.++.++....+.
T Consensus 194 ~~~--~~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~ 260 (309)
T cd05289 194 DYT--KGDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVE 260 (309)
T ss_pred eCC--CCchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEec
Confidence 665 223332 2333 799999999984 778899999997 99999987543211 222345555444332
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.. ...+.++++++.++.++. ++.+.|+++++++|++.+.+++.. |+++
T Consensus 261 ~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 261 PD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 11 346888899998888653 367889999999999999887765 7663
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-31 Score=244.34 Aligned_cols=306 Identities=26% Similarity=0.418 Sum_probs=247.2
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCC-CCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
|+|+++...+.+ +++.+.+ |.+. +++++|++.++++|++|+..+.|.. ..|..+|+|++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 688998765543 7777776 6666 4999999999999999998876653 236689999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||+|+.+.. .|++++|+.++.+.++++|++
T Consensus 80 ~~G~~V~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~ip~~ 111 (323)
T cd08241 80 KVGDRVVALTG------------------------------------------------QGGFAEEVVVPAAAVFPLPDG 111 (323)
T ss_pred CCCCEEEEecC------------------------------------------------CceeEEEEEcCHHHceeCCCC
Confidence 99999998720 148999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++..+++.+...+.+||+++.+...++++++|+|+|+ |.+|++++++|+..|+ .+++++.++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd08241 112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID 190 (323)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeee
Confidence 9999999899999999999877888999999999998 9999999999999999 7999999999999999999888777
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-cccccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~ 322 (378)
.. ..++.+.+...+.+ ++|+++|++|+ .....++++++++ |+++.+|....... .+.. ..+.++.++.+..+.
T Consensus 191 ~~--~~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd08241 191 YR--DPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYWG 265 (323)
T ss_pred cC--CccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEecc
Confidence 65 45677778887776 89999999997 6778899999997 99999987543211 1112 223457777776543
Q ss_pred cCCc------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEe
Q 017052 323 GWKP------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 375 (378)
Q Consensus 323 ~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~ 375 (378)
.+.. .+.+.++++++.++.+... +...|+++++.++++.+.+++.. |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 266 AYARREPELLRANLAELFDLLAEGKIRPH--VSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cccchhHHHHHHHHHHHHHHHHCCCcccc--cceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 3211 1345678888888886543 56889999999999998887765 88763
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-31 Score=243.94 Aligned_cols=292 Identities=26% Similarity=0.312 Sum_probs=224.8
Q ss_pred EEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCC
Q 017052 26 VVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99 (378)
Q Consensus 26 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (378)
++.+.+.|.+++++|+|+++++++|++|+..+.|.. ..|..+|||++|+|+++|+++.++++||+|+.....+
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 777888899999999999999999999998877643 2467899999999999999999999999998763110
Q ss_pred CCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhh
Q 017052 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179 (378)
Q Consensus 100 ~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ 179 (378)
..|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 94 --------------------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 129 (319)
T cd08267 94 --------------------------------------------GGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL 129 (319)
T ss_pred --------------------------------------------CCceeeEEEEechhheEECCCCCCHHHHHhhhhHHH
Confidence 125899999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 180 ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
+||+++.+...+++|++|+|+|+ |.+|++++++|+.+|+ +++++.++ ++.+.++++|.+.+++.. ..++. ..
T Consensus 130 ~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~--~~~~~---~~ 202 (319)
T cd08267 130 TALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYT--TEDFV---AL 202 (319)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCC--CCCcc---hh
Confidence 99999877777999999999998 9999999999999999 88888765 888888999998888765 22332 33
Q ss_pred HhCC-CccEEEeccCCh-HHHHHHHHHhccCCccEEEeccCCCCCeeec---cccccccccEEEEeeeccCCcCCcHHHH
Q 017052 259 ITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAA---HYGLFLSGRTLKGSLFGGWKPKTDLPSL 333 (378)
Q Consensus 259 ~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 333 (378)
.+.+ ++|+++||+|+. ......+..++++ |+++.+|.......... ..........+...... .. .+.+.++
T Consensus 203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 279 (319)
T cd08267 203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK-PN-AEDLEQL 279 (319)
T ss_pred ccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEec-CC-HHHHHHH
Confidence 4444 899999999852 2233334448886 99999987654222221 11111112222222211 11 3568889
Q ss_pred HHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 334 VNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 334 ~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
++++.++.+.. .+.+.|+++++++|++.+.+++.. |+++
T Consensus 280 ~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 280 AELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 99999888654 367889999999999999887665 7663
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=237.87 Aligned_cols=281 Identities=22% Similarity=0.281 Sum_probs=228.5
Q ss_pred CcEEEEEeEEecCcccccccccCC-CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccc
Q 017052 38 EEIRIKVVCTSLCRSDITAWETQA-IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL 116 (378)
Q Consensus 38 ~evlV~v~~~~i~~~D~~~~~g~~-~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~ 116 (378)
+|++||+.++++|++|+....|.. .+|.++|+|++|+|+++|+.+..|++||+|++..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~--------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA--------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCCCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe---------------------
Confidence 589999999999999999887753 3588999999999999999999999999998761
Q ss_pred cccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCe
Q 017052 117 GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGST 196 (378)
Q Consensus 117 ~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~ 196 (378)
.|+|+||+.++.+.++++|+++++++++.+++++.++|.++.+...+++|++
T Consensus 60 ----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~ 111 (293)
T cd05195 60 ----------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGES 111 (293)
T ss_pred ----------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCE
Confidence 1489999999999999999999999999999999999999878889999999
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC--CcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccC
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g--~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g 272 (378)
|+|+|+ |.+|++++|+|+.+|+ +++++.+++++.+.++.++ ++.+++.. ..++.+.+.+++.+ ++|+++|++|
T Consensus 112 vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~ 188 (293)
T cd05195 112 VLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRATGGRGVDVVLNSLS 188 (293)
T ss_pred EEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHhCCCCceEEEeCCC
Confidence 999976 9999999999999999 8999999999999998888 67777665 55677788888776 8999999999
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC---c---CCcHHHHHHHHHcCCCCCCc
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK---P---KTDLPSLVNRYLKKEFMVDE 346 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~ 346 (378)
+. .+..++++++++ |+++.+|.........+....+.++.++....+.... . .+.+.++++++.++.+.+
T Consensus 189 ~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 264 (293)
T cd05195 189 GE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKP-- 264 (293)
T ss_pred ch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCccc--
Confidence 85 788999999997 9999998765321112222223345555544332211 0 123567888888888653
Q ss_pred ceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 347 FITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 347 ~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
.....+++++++++++.+.+++.. |+++
T Consensus 265 ~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 265 LPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred CCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 355778999999999999988766 7763
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-30 Score=236.86 Aligned_cols=277 Identities=20% Similarity=0.323 Sum_probs=225.4
Q ss_pred EEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCccccccccc
Q 017052 42 IKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121 (378)
Q Consensus 42 V~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~ 121 (378)
||+.++++|++|++...|.+..|.++|+|++|+|+++|+.+..|++||+|+..
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~--------------------------- 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--------------------------- 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------------
Confidence 89999999999999888865557899999999999999999999999999876
Q ss_pred ccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEc
Q 017052 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG 201 (378)
Q Consensus 122 g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~G 201 (378)
. .|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.+...+.+|++|+|+|
T Consensus 55 ----~------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g 112 (288)
T smart00829 55 ----A------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHA 112 (288)
T ss_pred ----c------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEec
Confidence 1 248999999999999999999999999999999999999987888899999999998
Q ss_pred c-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC--cEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHH
Q 017052 202 L-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMI 277 (378)
Q Consensus 202 a-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~--~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~ 277 (378)
+ |.+|++++++|+.+|+ +++++++++++.+.++++|+ +.++++. ..++.+.+.+...+ ++|+++|++++ ...
T Consensus 113 ~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~ 188 (288)
T smart00829 113 AAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRATGGRGVDVVLNSLAG-EFL 188 (288)
T ss_pred CCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHhCCCCcEEEEeCCCH-HHH
Confidence 6 9999999999999999 89999999999999999998 6777665 45677778877776 89999999996 677
Q ss_pred HHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC-----cCCcHHHHHHHHHcCCCCCCcceeeee
Q 017052 278 TTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK-----PKTDLPSLVNRYLKKEFMVDEFITHNL 352 (378)
Q Consensus 278 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~ 352 (378)
...+.+++++ |+++.+|.........+....+.++.++.+..+.... ..+.+.++++++.++.+.+. ..+.|
T Consensus 189 ~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 265 (288)
T smart00829 189 DASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVF 265 (288)
T ss_pred HHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEE
Confidence 8899999997 9999998754222222233333445665554432111 01235677888888887653 34779
Q ss_pred ccccHHHHHHHhhcCcee-EEEE
Q 017052 353 LFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 353 ~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
++++++++++.+.+++.. |+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 266 PISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cHHHHHHHHHHHhcCCCcceEeC
Confidence 999999999999988665 7663
|
Enoylreductase in Polyketide synthases. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=249.75 Aligned_cols=290 Identities=20% Similarity=0.224 Sum_probs=244.2
Q ss_pred eEEEEeecC---CCCCCcEEEEEeEEecCcccccccccCCC---CC-------cccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 25 LVVEEVEVN---PPQPEEIRIKVVCTSLCRSDITAWETQAI---FP-------RIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 25 ~~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~p-------~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
++|.+-|.. +..++.=+.-|.|+.||..|..+..|... .| .++|.|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 666666654 34677789999999999999999888761 22 5789999988 3459999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhh
Q 017052 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171 (378)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a 171 (378)
++.... -++++.+.++.+++|.+|++.++|+|
T Consensus 1499 M~mvpA------------------------------------------------ksLATt~l~~rd~lWevP~~WTleeA 1530 (2376)
T KOG1202|consen 1499 MGMVPA------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEEA 1530 (2376)
T ss_pred EEeeeh------------------------------------------------hhhhhhhhcchhhhhhCCcccchhhc
Confidence 887422 17888999999999999999999999
Q ss_pred hhhchhhhhhHHHHHhhcCCCCCCeEEEE-ccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCC
Q 017052 172 CLLSCGLSAGLGAAWNVADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPN 246 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~~g~~VLI~-Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~ 246 (378)
++.|+.+.||||||..+...++|+++||+ |+|++|++||.+|.+.|+ +|+.+..+++|++++.+ +...++-|.+
T Consensus 1531 stVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSR 1609 (2376)
T KOG1202|consen 1531 STVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSR 1609 (2376)
T ss_pred ccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccc
Confidence 99999999999999999999999999999 459999999999999999 89999999999999876 3345555665
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
+.+|...+.+.|.| |+|+|+++... +.++.+++||+.+ ||+..+|...-..+.++....|++|.+++|..+....
T Consensus 1610 --dtsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvm 1685 (2376)
T KOG1202|consen 1610 --DTSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVM 1685 (2376)
T ss_pred --cccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhh
Confidence 78999999999999 99999999986 7899999999998 9999999776656667778888899999999765432
Q ss_pred c--CCcHHHHHHHHHcCCCC--CCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 326 P--KTDLPSLVNRYLKKEFM--VDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~~--~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
. .+.|.++..++++|.-. ++++.+++|+-+++++||+++.+++++ ||||++.
T Consensus 1686 ege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1686 EGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred cCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 2 24577777887766433 566778999999999999999999998 9999863
|
|
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-28 Score=219.77 Aligned_cols=246 Identities=30% Similarity=0.398 Sum_probs=195.9
Q ss_pred CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccc
Q 017052 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYH 141 (378)
Q Consensus 62 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~ 141 (378)
++|.++|+|++|+|+++|+++.+|++||+|+..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 678899999999999999999999999999876
Q ss_pred cccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeE
Q 017052 142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221 (378)
Q Consensus 142 ~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~v 221 (378)
+.|++|+.++.+.++++|+++++++++.+ +.+.+||+++ ...++++|++|||+|+|.+|++++++|+.+|++++
T Consensus 52 ----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~v 125 (277)
T cd08255 52 ----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREV 125 (277)
T ss_pred ----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcE
Confidence 36999999999999999999999999888 7899999997 57899999999999889999999999999999339
Q ss_pred EEEcCChhhHHHHHhCC-CcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 222 IGVDTNPEKCEKAKAFG-VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 222 i~v~~~~~~~~~l~~~g-~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+++++++++.+.++++| .+.+++.. . ....+ ++|++||+++........+++++++ |+++.+|....
T Consensus 126 i~~~~~~~~~~~~~~~g~~~~~~~~~--~--------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~ 194 (277)
T cd08255 126 VGVDPDAARRELAEALGPADPVAADT--A--------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGL 194 (277)
T ss_pred EEECCCHHHHHHHHHcCCCccccccc--h--------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCC
Confidence 99999999999999999 45554432 1 11233 8999999998777888999999997 99999987654
Q ss_pred CCeeeccccccccccEEEEeeeccC---------CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcC--c
Q 017052 300 KPEVAAHYGLFLSGRTLKGSLFGGW---------KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG--K 368 (378)
Q Consensus 300 ~~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~--~ 368 (378)
. ..........+..++.+...... ...+.+.++++++.++.+... +.+.|+++++++|++.++++ .
T Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~ 271 (277)
T cd08255 195 K-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAYRLLFEDPPE 271 (277)
T ss_pred C-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHHHHHHcCCcc
Confidence 3 11111111123445555543211 112468899999999986543 56889999999999999888 3
Q ss_pred eeEEEE
Q 017052 369 CLRSVI 374 (378)
Q Consensus 369 ~~kvvi 374 (378)
..|+++
T Consensus 272 ~~k~~~ 277 (277)
T cd08255 272 CLKVVL 277 (277)
T ss_pred ceeeeC
Confidence 348764
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-25 Score=191.87 Aligned_cols=292 Identities=21% Similarity=0.235 Sum_probs=222.2
Q ss_pred EEEeecC-CCCCCcEEEEEeEEecCcccccccccCC----CCCcccc----cceeEEEEEeCCCCCcCCCCCEEEeeccc
Q 017052 27 VEEVEVN-PPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFG----HEASGIVESVGPGVTEFNEGEHVLTVFIG 97 (378)
Q Consensus 27 ~~~~~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (378)
..+.+++ ++++++|+||.+|-+.++.-...+.-.. -.|+.+| ..++|+|++. ..+.+++||.|.++.
T Consensus 26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~-- 101 (343)
T KOG1196|consen 26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV-- 101 (343)
T ss_pred eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec--
Confidence 3444443 5789999999999999875433222111 1233333 3789999995 567899999998872
Q ss_pred CCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCC--CCChhhh-h
Q 017052 98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSS--IAPLEKI-C 172 (378)
Q Consensus 98 ~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~--~l~~~~a-a 172 (378)
+|.||.+++.. ..++||. ++++... .
T Consensus 102 -------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg 132 (343)
T KOG1196|consen 102 -------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLG 132 (343)
T ss_pred -------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhh
Confidence 79999999765 4455543 4555444 3
Q ss_pred hhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~ 250 (378)
.+..+.+|||..+++.+..++|++|+|.|| |++|+.+.|+|+.+|+ .|++.+.+++|..+++. +|.+..+||.+ +.
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~-e~ 210 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE-ES 210 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC-cc
Confidence 466688999999999999999999999988 9999999999999999 99999999999998876 79999999983 44
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC---Ceeecc--ccccccccEEEEeeeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVAAH--YGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~~~--~~~~~~~~~i~g~~~~~~~ 325 (378)
+..+++++..+.++|+.||.+|+ ..+...+..|+.. ||++.+|+.+.. .+..+. ...+.+.+++.|+....+.
T Consensus 211 ~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~ 288 (343)
T KOG1196|consen 211 DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYL 288 (343)
T ss_pred CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechh
Confidence 78888998877799999999999 6889999999996 999999976642 111111 2223457777777654433
Q ss_pred c--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 326 P--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
+ .+.++.+..++.+|+|...+-+ .-.|+..++||.-|-+++-. |.++++.
T Consensus 289 d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 289 DKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred hhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence 2 2345778889999998876433 23699999999999998886 8888764
|
|
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-23 Score=159.77 Aligned_cols=105 Identities=37% Similarity=0.632 Sum_probs=91.4
Q ss_pred CCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCC
Q 017052 37 PEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 112 (378)
Q Consensus 37 ~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~ 112 (378)
|+||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++|++++.|++||+|++.+...|..|..|+.+..+.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 7899999999999999999999832 789999999999999999999999999999999988899999999999999
Q ss_pred cccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 113 c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
|......+.+ ..|+|+||+++|+++++||
T Consensus 81 c~~~~~~g~~---------------------~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLG---------------------LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTS---------------------STCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcC---------------------CCCcccCeEEEehHHEEEC
Confidence 9877654333 2369999999999999985
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=127.64 Aligned_cols=127 Identities=28% Similarity=0.422 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHH
Q 017052 204 TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 282 (378)
Q Consensus 204 ~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 282 (378)
++|++++|+|+.+|+ +|++++++++|++.++++|++++++++ +.++.+.+++++++ ++|+||||+|.+..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~--~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYS--DDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETT--TSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhccccccccc--ccccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999997 999999999999999999999999997 66799999999998 99999999998799999999
Q ss_pred HhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccCCcCCcHHHHHHHHH
Q 017052 283 SCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYL 338 (378)
Q Consensus 283 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 338 (378)
+++++ |+++.+|.+. +....++...+ .+++++.|++... .++++++++++.
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 99997 9999999988 34455554443 5699999998765 357888888765
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.7e-12 Score=120.02 Aligned_cols=177 Identities=16% Similarity=0.180 Sum_probs=133.0
Q ss_pred hHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 181 GLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 181 a~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
.+.++.+..+ ..+|++|+|.|+|.+|+.+++.|+.+|+ +|++++.++.|.+.++.+|+..+ + ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v--- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV--- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH---
Confidence 3445545444 3689999999999999999999999999 89999999999999999998433 1 11222
Q ss_pred hCCCccEEEeccCChHHHHHH-HHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcHH--HHHHH
Q 017052 260 TDGGADYSFECIGDTGMITTA-LQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP--SLVNR 336 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~~ 336 (378)
.++|+||+|+|....+... +..++++ |+++.+|.. +..+++.... .+.+++.++..... ..+++ +.+.+
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~~~L~-~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDVKGLK-ENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCHHHHH-hhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2689999999988777765 8999997 999999854 2334433322 34777776654321 11344 78999
Q ss_pred HHcCCC-CCCcceeee-----eccc-cHHHHHHHhhcCcee--EEEEeCC
Q 017052 337 YLKKEF-MVDEFITHN-----LLFE-DINQAFNLMKEGKCL--RSVIHMP 377 (378)
Q Consensus 337 ~~~~~~-~~~~~i~~~-----~~l~-~i~~A~~~l~~~~~~--kvvi~~~ 377 (378)
+.+|.+ ++...+++. ++|+ |+.++++.+.++... |+++.++
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 999998 788777888 8899 999999999887653 8877654
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.8e-11 Score=116.89 Aligned_cols=153 Identities=18% Similarity=0.208 Sum_probs=111.7
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCC-----------chHHHHHHH
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNN-----------EPVQQVIKR 258 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~-----------~~~~~~i~~ 258 (378)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ .++.+...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 89999999999999999999854 5543211 133333333
Q ss_pred H-hC--CCccEEEeccCCh-----HH-HHHHHHHhccCCccEEEeccCCCCC-eeecccccc-c-cccEEEEeeeccCCc
Q 017052 259 I-TD--GGADYSFECIGDT-----GM-ITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGLF-L-SGRTLKGSLFGGWKP 326 (378)
Q Consensus 259 ~-~~--~~~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~-~-~~~~i~g~~~~~~~~ 326 (378)
. .. +++|+||+|++.+ .. .++.++.++++ |++++++...+.. ....+...+ . +++++.|.....
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P--- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP--- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc---
Confidence 2 33 3799999999963 35 48999999997 9999999753321 233332333 2 688888876321
Q ss_pred CCcHH-HHHHHHHcCCCCCCccee
Q 017052 327 KTDLP-SLVNRYLKKEFMVDEFIT 349 (378)
Q Consensus 327 ~~~~~-~~~~~~~~~~~~~~~~i~ 349 (378)
..+. ...+++.++.+.+..+++
T Consensus 317 -~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 -SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -hhHHHHHHHHHHhCCccHHHHhc
Confidence 2444 588999999887766654
|
|
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.8e-12 Score=103.53 Aligned_cols=120 Identities=16% Similarity=0.221 Sum_probs=76.6
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC--ChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccccccc
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG--DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR 314 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 314 (378)
||++++++|+ ..++ ...+++|+|||++| +...+..+++++ ++ |+++.++. ....+.........
T Consensus 1 LGAd~vidy~--~~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~----~~~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYR--DTDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG----DLPSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETT--CSHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S----HHHHHHHHHHCHHC
T ss_pred CCcCEEecCC--Cccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC----cccchhhhhcccce
Confidence 6999999997 4555 22349999999999 655556777888 86 99999974 00111111111122
Q ss_pred EEEEeeecc--CC--cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEE
Q 017052 315 TLKGSLFGG--WK--PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 374 (378)
Q Consensus 315 ~i~g~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi 374 (378)
++ ..+.. .. ..+.++++.+++.+|++++. +.++||++++.+|++.+++++.. |+||
T Consensus 67 ~~--~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 67 RY--SFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp EE--ECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EE--EEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 22 22211 11 12458999999999998776 88999999999999999999997 9986
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.6e-07 Score=82.95 Aligned_cols=163 Identities=19% Similarity=0.239 Sum_probs=100.2
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.+.+++|++||.+|+|. |..++++++..|.. +|++++.+++..+.+++ ++.+.+... ..++.+ + .+..+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~---~~d~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR---LGEIEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE---Ecchhh-C-CCCCC
Confidence 35688999999999977 88888888887753 69999999999888876 343322111 111111 1 12234
Q ss_pred CccEEEecc------CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcCCcHHHHHHH
Q 017052 263 GADYSFECI------GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336 (378)
Q Consensus 263 ~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 336 (378)
.||+|+... +....+.++.+.|+++ |+++..+..... .+ + ..+.....+.+..... .....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~--~-~~~~~~~~~~~~~~~~---~~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL--P-EEIRNDAELYAGCVAG---ALQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC--C-HHHHHhHHHHhccccC---CCCHHHHHHH
Confidence 799988432 2346789999999997 999987655432 11 1 1111121111111111 1245666777
Q ss_pred HHcCCCC-CCcceeeeeccccHHHHHHHh
Q 017052 337 YLKKEFM-VDEFITHNLLFEDINQAFNLM 364 (378)
Q Consensus 337 ~~~~~~~-~~~~i~~~~~l~~i~~A~~~l 364 (378)
+.+..+. ........++++++.++++.+
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHh
Confidence 7764433 332244567899999999988
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.5e-06 Score=84.24 Aligned_cols=107 Identities=20% Similarity=0.266 Sum_probs=81.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCC-----------CCchHHHHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPND-----------NNEPVQQVIKRI 259 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~-----------~~~~~~~~i~~~ 259 (378)
.++.+|+|+|+|.+|++++++|+.+|+ .|++++.+.++++.++++|++.+. +..+ -..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 457899999999999999999999999 799999999999999999987632 3211 012333333333
Q ss_pred hC---CCccEEEecc---CChH---HHHHHHHHhccCCccEEEeccCCCC
Q 017052 260 TD---GGADYSFECI---GDTG---MITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 260 ~~---~~~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
.. .++|+||+|+ |.+. ..++.++.++++ +.+++++...++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 32 2799999999 6533 567889999997 999999876553
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=6.4e-06 Score=78.35 Aligned_cols=105 Identities=23% Similarity=0.334 Sum_probs=79.9
Q ss_pred hhHHHHHhhcCCC-CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 180 AGLGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 180 ta~~al~~~~~~~-~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
..|.++.+..++. .|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+. +.+ +.+.+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal-- 265 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA-- 265 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH--
Confidence 4556654443554 89999999999999999999999999 899999998887766666754 221 22222
Q ss_pred HhCCCccEEEeccCChHHHH-HHHHHhccCCccEEEeccCCC
Q 017052 259 ITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 259 ~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~ 299 (378)
.++|+||+++|....+. ..+..++++ +.++.+|....
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d~ 303 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFDN 303 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCCC
Confidence 16899999999876665 678888986 88999887653
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.3e-05 Score=73.43 Aligned_cols=99 Identities=20% Similarity=0.339 Sum_probs=76.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.+++|+|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|...+ .+ .++.+.+ .++|+||+|+.
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~l~~~l-----~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SELAEEV-----GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HHHHHHh-----CCCCEEEECCC
Confidence 68999999999999999999999999 99999999999888888887533 22 1222222 26899999987
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCee
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 303 (378)
........++.++++ +.+++++.......+
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd~ 249 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTDF 249 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCcCe
Confidence 644456677889986 999999877654433
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.5e-08 Score=92.79 Aligned_cols=160 Identities=16% Similarity=0.173 Sum_probs=105.2
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccc
Q 017052 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145 (378)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 145 (378)
.-|.|+++.+.+|+++..+ +|++.+.. |+.|.+| ++.|......+..+ .
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~~l---------------------~ 137 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGKVL---------------------E 137 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchHHH---------------------H
Confidence 4688999999999888765 66666666 7777777 55565554422111 1
Q ss_pred cceeeEEEEeCCceee---C-CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeE
Q 017052 146 SSFSEYTVVHSGCAVK---V-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221 (378)
Q Consensus 146 g~~a~~~~v~~~~~~~---i-P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~v 221 (378)
+.|++++.++. .+.. | +..+|...+|. ....+..+..++++|+|+|+|.+|..+++.++..|+.+|
T Consensus 138 ~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av---------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V 207 (417)
T TIGR01035 138 RLFQKAFSVGK-RVRTETDISAGAVSISSAAV---------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI 207 (417)
T ss_pred HHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH---------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence 47888777764 3332 3 23333332221 111244455788999999999999999999999996689
Q ss_pred EEEcCChhhHH-HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHH
Q 017052 222 IGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (378)
Q Consensus 222 i~v~~~~~~~~-~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 276 (378)
+++.++.++.+ +++.+|.. .+.+ .++.+.+. ++|+||.|++.+..
T Consensus 208 ~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l~-----~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 208 LIANRTYERAEDLAKELGGE-AVKF----EDLEEYLA-----EADIVISSTGAPHP 253 (417)
T ss_pred EEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHHh-----hCCEEEECCCCCCc
Confidence 99999988754 66777763 2222 12222222 68999999987543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.9e-05 Score=74.74 Aligned_cols=103 Identities=21% Similarity=0.367 Sum_probs=78.3
Q ss_pred hHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 181 GLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 181 a~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
++.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal--- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA--- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH---
Confidence 3444434434 3689999999999999999999999999 899999988887777777762 221 11222
Q ss_pred hCCCccEEEeccCChHHHHH-HHHHhccCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGDTGMITT-ALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~-~~~~l~~~~G~~v~~g~~~ 298 (378)
.+.|++|+++|....+.. .+..++++ +.++.+|...
T Consensus 249 --~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 --KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred --hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 257999999998777764 78888986 8999988754
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.3e-06 Score=76.12 Aligned_cols=107 Identities=23% Similarity=0.283 Sum_probs=80.0
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCC----CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhH-H
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADI----SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC-E 232 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~----~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~-~ 232 (378)
..+++|+.+..+.++... +.+.++.++ +.+.. .++++|+|+|+|.+|+.+++.++..|..+|+++.++.++. +
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 568889999988887765 666777775 33332 4799999999999999999999998877899999998865 6
Q ss_pred HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHH
Q 017052 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 276 (378)
Q Consensus 233 ~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 276 (378)
+++++|.. +++++ ++.+.+. ..|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~~----~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLD----ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHH----HHHHHHh-----cCCEEEECCCCCch
Confidence 77788873 33321 2333232 57999999998654
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.05 E-value=4.5e-05 Score=72.89 Aligned_cols=102 Identities=23% Similarity=0.349 Sum_probs=78.8
Q ss_pred HHHHHhhcCC-CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh
Q 017052 182 LGAAWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 182 ~~al~~~~~~-~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
+-++.+..++ -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|...+ .+.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHHHHh---
Confidence 4445455444 679999999999999999999999999 89999998887767766776422 1222222
Q ss_pred CCCccEEEeccCChHH-HHHHHHHhccCCccEEEeccCC
Q 017052 261 DGGADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 261 ~~~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..|+++.+.|.... ....+..|+++ +.++.+|...
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 57999999997655 47899999997 9999998753
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.04 E-value=7.7e-05 Score=66.71 Aligned_cols=130 Identities=20% Similarity=0.192 Sum_probs=81.8
Q ss_pred ceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 147 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
+|.+|.. +...++.+++.+++..+.- +.+.. .+..+. ..+.++++||-+|+|. |..++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTH-PTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCC-HHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555543 6678899999888776542 21111 122221 1256899999999986 877776554 67757999999
Q ss_pred ChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCCh---HHHHHHHHHhccCCccEEEeccC
Q 017052 227 NPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT---GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 227 ~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++...+.+++. +....+... ... .||+|+-..... ..+..+.+.|+++ |+++..|..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~-------------~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLP-------------QGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEc-------------cCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99988777652 221111110 011 589998655432 3456778889997 999987654
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00017 Score=69.26 Aligned_cols=126 Identities=21% Similarity=0.300 Sum_probs=85.7
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
.++.+|+...-..+--......+.+..+.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+..
T Consensus 217 PV~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~ 295 (476)
T PTZ00075 217 PAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAM 295 (476)
T ss_pred eEEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHh
Confidence 355667765544332111112223344444433 4579999999999999999999999999 89999888777655555
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHH-HHHHHhccCCccEEEeccCC
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 298 (378)
.|+..+ .+.+.++ ..|+|+.++|....+. ..+..|+++ +.++++|...
T Consensus 296 ~G~~~~--------~leell~-----~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 296 EGYQVV--------TLEDVVE-----TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred cCceec--------cHHHHHh-----cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 565321 2222222 5899999998766664 789999997 9999998763
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00012 Score=69.27 Aligned_cols=99 Identities=19% Similarity=0.252 Sum_probs=70.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++.+|+|+|+|.+|+.+++.|+.+|+ +|+++++++++.+.+.. ++......+.+ ...+.+.+ ..+|+||+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l-----~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAV-----KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHH-----ccCCEEEEcc
Confidence 34569999999999999999999999 89999999888777654 55433333221 12232222 2689999997
Q ss_pred C---C--hH-HHHHHHHHhccCCccEEEeccCCC
Q 017052 272 G---D--TG-MITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 272 g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+ . +. .....++.++++ +.+++++...+
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 3 2 21 236777889987 99999886544
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0003 Score=64.06 Aligned_cols=99 Identities=17% Similarity=0.302 Sum_probs=72.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|+|+|.|.+|+++++.++..|+ +|+++.+++++.+.+.++|...+ .+ .++.+.+ .++|+|++++.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~l~~~l-----~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NKLEEKV-----AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HHHHHHh-----ccCCEEEECCC
Confidence 58899999999999999999999999 89999999988877777775422 11 1222222 26899999987
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCee
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 303 (378)
..-.-...++.++++ ..+++++..+...++
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~tdf 248 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGGTDF 248 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCCCCH
Confidence 532234567778886 888888776654433
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00017 Score=74.07 Aligned_cols=113 Identities=23% Similarity=0.285 Sum_probs=75.3
Q ss_pred ceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 147 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
++++|..+++..++.+ +..+.+++..... ......+|+++||+|+ |++|..+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 6778888888777777 6677777652110 0122346899999997 9999999999999999 899999
Q ss_pred CChhhHHHHHh-CCC--c-E--EeCCCCCCchHHHHHHHHh--CCCccEEEeccC
Q 017052 226 TNPEKCEKAKA-FGV--T-E--FLNPNDNNEPVQQVIKRIT--DGGADYSFECIG 272 (378)
Q Consensus 226 ~~~~~~~~l~~-~g~--~-~--vi~~~~~~~~~~~~i~~~~--~~~~d~vid~~g 272 (378)
++.++.+.+.. ++. . . ..|..+ ..++.+.+.+.. .+++|++|++.|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 99887655433 433 1 1 224331 233333333332 247999999998
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.69 E-value=7.8e-05 Score=71.94 Aligned_cols=160 Identities=21% Similarity=0.182 Sum_probs=96.6
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccc
Q 017052 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145 (378)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 145 (378)
.-|+|+++.+.+|+++..+.-+|+. .. |.+|++. +..|......+.. -.
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~-----qI----lgQvk~a-~~~a~~~g~~g~~---------------------l~ 139 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEP-----QI----LGQVKDA-YALAQEAGTVGTI---------------------LN 139 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCCh-----HH----HHHHHHH-HHHHHHcCCchHH---------------------HH
Confidence 3599999999999998776444443 22 2233322 2222222211100 01
Q ss_pred cceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhc---CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEE
Q 017052 146 SSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA---DISKGSTVVIFGLGTVGLSVAQGAKARGASRII 222 (378)
Q Consensus 146 g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~---~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi 222 (378)
+.|++ .+++|+.+..+.+.. ..+.+.++.++.... +-.++++|+|+|+|.+|+++++.++..|+.+++
T Consensus 140 ~lf~~--------a~~~~k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~ 210 (423)
T PRK00045 140 RLFQK--------AFSVAKRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT 210 (423)
T ss_pred HHHHH--------HHHHHhhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence 23433 344555554433322 224556666653222 236789999999999999999999999987899
Q ss_pred EEcCChhhHH-HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChH
Q 017052 223 GVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (378)
Q Consensus 223 ~v~~~~~~~~-~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 275 (378)
++.++.++.+ +++.+|.+ ++.+. ++.+.+ .++|+||+|++.+.
T Consensus 211 v~~r~~~ra~~la~~~g~~-~~~~~----~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 211 VANRTLERAEELAEEFGGE-AIPLD----ELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEeCCHHHHHHHHHHcCCc-EeeHH----HHHHHh-----ccCCEEEECCCCCC
Confidence 9999988855 66777753 33221 222222 26899999998754
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=6.6e-05 Score=75.36 Aligned_cols=79 Identities=22% Similarity=0.320 Sum_probs=59.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHhCCCcEEeCCCC-
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---------------------PEKCEKAKAFGVTEFLNPND- 247 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~---------------------~~~~~~l~~~g~~~vi~~~~- 247 (378)
..++|++|+|+|+|++|+++++.++..|+ +|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888742 35667788899887776531
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+... +.+ ..++|+||+++|..
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~ 233 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQ 233 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCC
Confidence 11111 112 12689999999974
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00029 Score=61.08 Aligned_cols=79 Identities=22% Similarity=0.325 Sum_probs=60.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCC----cEEeCCCCCCchHHHHHHHHhCC--Cc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGV----TEFLNPNDNNEPVQQVIKRITDG--GA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~----~~vi~~~~~~~~~~~~i~~~~~~--~~ 264 (378)
.++.++|+|| +++|.+.++.....|+ +|+.++|+.++++.+. +++. ...+|..+ ..+..+.+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4578999999 9999999999999999 9999999999987664 4773 22345542 33555566655554 69
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+.++..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998884
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00023 Score=57.15 Aligned_cols=76 Identities=26% Similarity=0.369 Sum_probs=55.7
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCc--EEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT--EFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
+--+++++||+|+|++|++++..+...|+++++.+.|+.+|.+.+. .++.. ..+.++ ++.+.+. .+|+
T Consensus 8 ~~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~~-----~~Di 78 (135)
T PF01488_consen 8 GDLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEALQ-----EADI 78 (135)
T ss_dssp STGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHHH-----TESE
T ss_pred CCcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHHh-----hCCe
Confidence 3446899999999999999999999999978999999998876664 45322 244443 2222222 6899
Q ss_pred EEeccCCh
Q 017052 267 SFECIGDT 274 (378)
Q Consensus 267 vid~~g~~ 274 (378)
||+|++.+
T Consensus 79 vI~aT~~~ 86 (135)
T PF01488_consen 79 VINATPSG 86 (135)
T ss_dssp EEE-SSTT
T ss_pred EEEecCCC
Confidence 99998874
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.014 Score=53.24 Aligned_cols=140 Identities=13% Similarity=0.148 Sum_probs=85.6
Q ss_pred ceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcC---CCCCCeEEEEcc-ChHHHHHHHHHH-HcCCCeE
Q 017052 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGL-GTVGLSVAQGAK-ARGASRI 221 (378)
Q Consensus 147 ~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~---~~~g~~VLI~Ga-g~vG~~aiqla~-~~g~~~v 221 (378)
.|-+|.++..+....- .....++..-| -+.|+|. |.+... .-..+.|+|.+| +-.++.++.+++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4666766655433211 11112222222 3456664 322221 234467777787 778888888888 4554489
Q ss_pred EEEcCChhhHHHHHhCCC-cEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 222 IGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 222 i~v~~~~~~~~~l~~~g~-~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
|++++ ..+....+.+|. +.++.|+ .|..+....--+++|..|....+..+-..+...--+.+.+|....
T Consensus 166 vglTS-~~N~~Fve~lg~Yd~V~~Yd--------~i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 166 VGLTS-ARNVAFVESLGCYDEVLTYD--------DIDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred EEEec-CcchhhhhccCCceEEeehh--------hhhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 99954 556668889996 5677775 344443345578999999988877777777765344667775543
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0016 Score=59.01 Aligned_cols=77 Identities=26% Similarity=0.391 Sum_probs=56.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHh--CCCccEEEec
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~d~vid~ 270 (378)
+++||+|+ |++|..+++.+...|+ +|++++++.++.+.+...+...+ .|..+ ...+.+.+.... .+++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 57899998 9999999999999999 89999999888777766665433 35442 334444444432 2378999999
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.002 Score=56.82 Aligned_cols=103 Identities=22% Similarity=0.313 Sum_probs=67.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---CCCcEEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTEFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~---~g~~~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +. .+..+.+ |..+ ...+.+.+.+.. .++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4789999998 9999999999999999 899999988877555 22 2222333 3321 233333333322 136
Q ss_pred ccEEEeccCChH-----------------------HHHHHHHHhccCCccEEEeccCC
Q 017052 264 ADYSFECIGDTG-----------------------MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 264 ~d~vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+|.++.+.+... .++..+.++.++ |+++.++...
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 899998887421 133445566665 8898887653
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0018 Score=55.14 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=76.2
Q ss_pred hhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHhCCCcEEe-CCCCCCch
Q 017052 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE----KCEKAKAFGVTEFL-NPNDNNEP 251 (378)
Q Consensus 177 ~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~----~~~~l~~~g~~~vi-~~~~~~~~ 251 (378)
+...|. +.+...+++|++||=+|+| .|..++-+|+..| +|+.+.+.++ ....++.+|...+. ...|....
T Consensus 58 P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G 132 (209)
T COG2518 58 PHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKG 132 (209)
T ss_pred cHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccC
Confidence 334444 3477889999999999986 4899999999988 8999999887 34446678886543 22222222
Q ss_pred HHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 252 VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 252 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
| ... +||.|+-+.+.+..-..+++.|+++ |+++.-
T Consensus 133 ~-------~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 133 W-------PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred C-------CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 2 233 8999998888766667889999997 987764
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00097 Score=60.95 Aligned_cols=97 Identities=22% Similarity=0.288 Sum_probs=62.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcE-EeCCCCCCchHHHHHHHHhCCCcc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE-FLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~-vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +... +.... .+ ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~---~~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL---IY----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cc----cccccCCCce
Confidence 45789999999976 777777665 5666999999999887776552 2211 11110 01 1111234899
Q ss_pred EEEeccCCh---HHHHHHHHHhccCCccEEEeccC
Q 017052 266 YSFECIGDT---GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 266 ~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+|+...... ..+..+.+.++++ |+++..|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 998654332 3456678899997 999887643
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0025 Score=53.14 Aligned_cols=101 Identities=21% Similarity=0.248 Sum_probs=70.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
...++++|+.++=+|+|. |...+++|+..-..+||+++++++..+..+ +||.+.+.... .+..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~---g~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE---GDAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe---ccchHhhcCCC--
Confidence 456789999887788853 777788885544449999999999887764 48887654432 22223333221
Q ss_pred CccEEEeccCC--hHHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSFECIGD--TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+|.+|---|+ +..++.++..|+++ |++|.=
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~n 134 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVAN 134 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEE
Confidence 58999865443 35788899999997 998754
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0014 Score=55.13 Aligned_cols=78 Identities=23% Similarity=0.287 Sum_probs=57.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc---EEeCCCC--CCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT---EFLNPND--NNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~---~vi~~~~--~~~~~~~~i~~~~~~~~d~ 266 (378)
.|.+|||+|+ +++|+++++-...+|- +||..+|++++++.+++.... .+.|..+ +...+.+++++..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 4789999966 9999999999999998 999999999999988875432 2445542 12335555554322 5789
Q ss_pred EEeccC
Q 017052 267 SFECIG 272 (378)
Q Consensus 267 vid~~g 272 (378)
++++.|
T Consensus 82 liNNAG 87 (245)
T COG3967 82 LINNAG 87 (245)
T ss_pred eeeccc
Confidence 999887
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0037 Score=56.14 Aligned_cols=110 Identities=23% Similarity=0.296 Sum_probs=72.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee----CCCCCCchHHHHHHHH--h
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL----NPNDNNEPVQQVIKRI--T 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi----~~~~~~~~~~~~i~~~--~ 260 (378)
.|+.|+|+|| +++|.+++.-....|+ .++.+.+..++++.+ ++.+... ++ |.+ +.++..+.+.+. .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs-~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVS-DEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccC-CHHHHHHHHHHHHHh
Confidence 6889999999 8999999888888899 677777777766555 3444433 22 332 133444444332 2
Q ss_pred CCCccEEEeccCCh-------------------------HHHHHHHHHhccCC-ccEEEeccCCCCCeee
Q 017052 261 DGGADYSFECIGDT-------------------------GMITTALQSCCDGW-GLAVTLGVPKLKPEVA 304 (378)
Q Consensus 261 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~ 304 (378)
-|++|+.++..|-. .....++..|.+.+ |+++.++...+...++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 34899999987732 23445666776654 9999998766543333
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0022 Score=58.22 Aligned_cols=78 Identities=19% Similarity=0.333 Sum_probs=56.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHH---hCCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRI---TDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~---~~~~~d~v 267 (378)
.+++|||+|+ |++|..+++.+...|+ +|+++++++++.+.+...+...+ .|..+ ..++.+.+... ..+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 4678999998 9999999999988999 89999999988887776665443 34442 22333333332 23478999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
+++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0052 Score=52.83 Aligned_cols=102 Identities=19% Similarity=0.299 Sum_probs=69.3
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hCC-CcEEeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFG-VTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~----~~g-~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
...++.++++||.+|+|. |..++.+|+..+. .+|++++.+++..+.++ .++ .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhhc-
Confidence 456788999999999987 8999999987642 38999999998887654 356 23322211 1222222221
Q ss_pred CCCccEEEeccCC---hHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999975442 34677788899997 998753
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0034 Score=55.90 Aligned_cols=80 Identities=21% Similarity=0.275 Sum_probs=57.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE-Ee--CCCCCCchHHHHHH-HHh
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-FL--NPNDNNEPVQQVIK-RIT 260 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~-vi--~~~~~~~~~~~~i~-~~~ 260 (378)
...++++||+|| +++|...+..+...|. .++.+.|+.+|++.+.+ .+... ++ |.. +.+-.+.+. ++.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs--~~~~~~~l~~~l~ 79 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLS--DPEALERLEDELK 79 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCC--ChhHHHHHHHHHH
Confidence 346789999999 9999999999999999 89999999999877643 33322 33 443 333333333 333
Q ss_pred CC--CccEEEeccCC
Q 017052 261 DG--GADYSFECIGD 273 (378)
Q Consensus 261 ~~--~~d~vid~~g~ 273 (378)
.. .+|+.+++.|-
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 22 78999999984
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0037 Score=52.80 Aligned_cols=94 Identities=21% Similarity=0.304 Sum_probs=63.0
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC--
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD-- 273 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-- 273 (378)
|+|+|+ |.+|..+++.+...|. +|+++.+++++.+. ..+... +..+ ..+. +.+.+... ++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d--~~d~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGD--LFDP-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESC--TTCH-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceee--ehhh-hhhhhhhh-hcchhhhhhhhhc
Confidence 789998 9999999999999998 99999999998877 344433 3222 1122 22333222 79999999984
Q ss_pred --hHHHHHHHHHhccC-CccEEEeccCC
Q 017052 274 --TGMITTALQSCCDG-WGLAVTLGVPK 298 (378)
Q Consensus 274 --~~~~~~~~~~l~~~-~G~~v~~g~~~ 298 (378)
.......++.++.. -.+++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 23455556665443 14677766544
|
... |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0029 Score=57.29 Aligned_cols=79 Identities=20% Similarity=0.374 Sum_probs=56.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
++++++|+|+ |.+|..+++.+...|+ +|++++++.++.+.+...+...+ .|..+ ..++.+.+.+.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 4678999998 9999999999988999 89999999888766655554332 34431 333444444332 23799999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0036 Score=59.48 Aligned_cols=113 Identities=17% Similarity=0.153 Sum_probs=76.6
Q ss_pred hhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchH
Q 017052 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~ 252 (378)
.+..+-...+..+.+..++++|++||.+|+| .|..++.+++..|+ +|++++.+++..+.+++......+... ..++
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~--~~D~ 222 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIR--LQDY 222 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEE--ECch
Confidence 3433444555556678889999999999985 57778888988898 999999999999988764321111111 1112
Q ss_pred HHHHHHHhCCCccEEEec-----cCC---hHHHHHHHHHhccCCccEEEec
Q 017052 253 QQVIKRITDGGADYSFEC-----IGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 253 ~~~i~~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
. .+ .+.+|.|+.. +|. ...+..+.+.|+++ |+++...
T Consensus 223 ~----~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 223 R----DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred h----hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 1 11 3478988742 332 24677888899997 9988754
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0049 Score=52.23 Aligned_cols=80 Identities=20% Similarity=0.314 Sum_probs=58.8
Q ss_pred CCCeEEEEcc--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcE-EeCCCC--CCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FLNPND--NNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga--g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~-vi~~~~--~~~~~~~~i~~~~~~~~d~ 266 (378)
..+.|||+|+ |++|.+++.=...-|+ .|+++.++-+....|. ++|... -+|.++ +-..+...+++.+.|..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4578999974 8999999988889999 9999999999887776 677533 344442 1223444555666678999
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
.++..|-
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9997775
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.007 Score=56.92 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=67.2
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC---Cc-EEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VT-EFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g---~~-~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
++|||+|+|.+|+.+++.+.+.+-.+|+..+++.++.+.+.... .. ..+|.. +...+.+.|+ ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-d~~al~~li~-----~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAA-DVDALVALIK-----DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEeccc-ChHHHHHHHh-----cCCEEEEe
Confidence 57999999999999999988888459999999999988887653 22 234443 1234444443 46999999
Q ss_pred cCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
....-.+..+-.|++.+ =.+++......
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~~ 103 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYYEE 103 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccCCc
Confidence 98754443333455543 55666655543
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0058 Score=56.49 Aligned_cols=102 Identities=20% Similarity=0.250 Sum_probs=70.7
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----hCCCcEEeCCCCCCchHHHHHHHHh
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~----~~g~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ ++|.+.+.... .+..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc--
Confidence 355678899999999997 59999999998763 26999999998765554 46665443222 122111111
Q ss_pred CCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|+|+.+.+........++.++++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 137999998877655566778889997 987763
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.011 Score=52.13 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC---cEEe--CCCCCCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---TEFL--NPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~---~~vi--~~~~~~~~~~~~i~~~~~--~~ 263 (378)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++...+ +.+.. -+.+ |.. +..++.+.+.++.. ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVR-DEADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCC-CHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999998888899 899999988765443 33321 1222 332 13334444443322 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 8999998763
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.017 Score=50.82 Aligned_cols=77 Identities=21% Similarity=0.347 Sum_probs=49.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH-HHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK-AKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~-l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
++++|||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+. ..+++...+ .|..+ ...+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4789999998 9999999999999999 7776644 4444433 344555432 23321 2233333332 23689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99874
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0045 Score=52.27 Aligned_cols=91 Identities=31% Similarity=0.421 Sum_probs=63.5
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
--.|++|.|+|.|.+|+.+++.++..|+ +|++.+++....+.....+.. . .++.+.+. ..|+|+.+
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~-------~~l~ell~-----~aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y-------VSLDELLA-----QADIVSLH 98 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E-------SSHHHHHH-----H-SEEEE-
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e-------eehhhhcc-----hhhhhhhh
Confidence 3469999999999999999999999999 999999988877755555542 1 13444444 36898887
Q ss_pred cCChH-----HHHHHHHHhccCCccEEEecc
Q 017052 271 IGDTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
...++ .-...+..|+++ ..+|+++-
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hccccccceeeeeeeeeccccc-eEEEeccc
Confidence 76322 234567888886 77777643
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0012 Score=50.34 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=62.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|||+|+|.+|..-++.+...|+ +|+++.... +..+ +.-... ...+.+. -.++++||-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-----~~~~~~~-----l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-----RREFEED-----LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-----ESS-GGG-----CTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-----hhhHHHH-----HhhheEEEecCC
Confidence 57899999999999999999999999 899987775 2222 111121 1122111 127899999998
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCeeec
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 305 (378)
.+..-+......+.. +.++.+.+.+...++.+
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF~~ 101 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELCDFIF 101 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCCSEE-
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCCeEEc
Confidence 866666666667766 99999977665554443
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0082 Score=49.17 Aligned_cols=100 Identities=20% Similarity=0.362 Sum_probs=64.4
Q ss_pred HHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 184 AAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 184 al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
++.+..+ .-.|++++|.|-|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|.... .+.+.+ .
T Consensus 12 ~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~-----~ 77 (162)
T PF00670_consen 12 GIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------TLEEAL-----R 77 (162)
T ss_dssp HHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------HHHHT-----T
T ss_pred HHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------CHHHHH-----h
Confidence 3333434 4589999999999999999999999999 99999999988877766666422 122222 2
Q ss_pred CccEEEeccCChHH-HHHHHHHhccCCccEEEeccCC
Q 017052 263 GADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 263 ~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..|++|-++|..+. -.+-+..|+++ ..+..+|...
T Consensus 78 ~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh~d 113 (162)
T PF00670_consen 78 DADIFVTATGNKDVITGEHFRQMKDG-AILANAGHFD 113 (162)
T ss_dssp T-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSSST
T ss_pred hCCEEEECCCCccccCHHHHHHhcCC-eEEeccCcCc
Confidence 57999999987554 45778899985 6666666543
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.013 Score=51.95 Aligned_cols=101 Identities=20% Similarity=0.231 Sum_probs=61.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHHH----HHhCCCcE-E--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-~~~~----l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ |.+|..++..+...|. +|+++.++.+ +.+. ++..+... . .|..+ ..+....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4689999998 9999999998888998 7888877643 2222 22233221 2 24331 2333333333322
Q ss_pred CCccEEEeccCCh-------------------HHHHHHHHHhccCCccEEEecc
Q 017052 262 GGADYSFECIGDT-------------------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+++|+++.+.|.. ..++.+.+.+..+ |+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689988877542 1334455555555 88888765
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0064 Score=54.26 Aligned_cols=77 Identities=27% Similarity=0.425 Sum_probs=55.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHH---HHHHHhCCCccEEEe
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQ---VIKRITDGGADYSFE 269 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~---~i~~~~~~~~d~vid 269 (378)
+++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+++.+...+ .|..+ ..++.+ .+.....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999999999 89999999998888877776443 34431 222222 233323347888888
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.017 Score=57.20 Aligned_cols=47 Identities=17% Similarity=0.207 Sum_probs=40.1
Q ss_pred hhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017052 187 NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l 234 (378)
...+.+.|++|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4556778999999998 9999999999988999 899999988876543
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0046 Score=57.69 Aligned_cols=79 Identities=24% Similarity=0.402 Sum_probs=54.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 5789999998 9999999999999999 899999988876533 34555432 24431 223333332221 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0076 Score=52.79 Aligned_cols=77 Identities=22% Similarity=0.331 Sum_probs=53.7
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE--eCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v--i~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+++++.... .|..+ ..++.+.+..+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 57899998 9999999988888899 89999998877766665543332 23331 23344444444434799999887
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 54
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0092 Score=57.22 Aligned_cols=80 Identities=21% Similarity=0.211 Sum_probs=57.0
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
..+--.+++|||+|+|.+|.+++..+...|+..++.+.++.++.+.+ +.++...++.++ ++.+.+ ..+|+
T Consensus 175 ~~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~----~l~~~l-----~~aDi 245 (414)
T PRK13940 175 QLDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS----ELPQLI-----KKADI 245 (414)
T ss_pred HhcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH----HHHHHh-----ccCCE
Confidence 33445788999999999999999999999987899999998876555 445522333322 222222 25899
Q ss_pred EEeccCChHH
Q 017052 267 SFECIGDTGM 276 (378)
Q Consensus 267 vid~~g~~~~ 276 (378)
||.|++.+..
T Consensus 246 VI~aT~a~~~ 255 (414)
T PRK13940 246 IIAAVNVLEY 255 (414)
T ss_pred EEECcCCCCe
Confidence 9999998643
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0093 Score=52.79 Aligned_cols=76 Identities=21% Similarity=0.432 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEE-eCCCCCCch-HHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEF-LNPNDNNEP-VQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~v-i~~~~~~~~-~~~~i~~~~~~~~d~vi 268 (378)
++++++|+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ .+...+ .|.. +.. +.+.+.. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~v~~~~~~--~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVG--DDAAIRAALAA--AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCC--CHHHHHHHHHH--hCCCCEEE
Confidence 5789999998 9999999999999999 89999998877655533 444332 3443 222 2222222 23789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.016 Score=52.01 Aligned_cols=79 Identities=20% Similarity=0.344 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ +.++... . .|..+ ..++.+.+.... .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999988 9999999999999999 899999988765443 4444322 2 24431 333434444332 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998773
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.014 Score=54.59 Aligned_cols=79 Identities=27% Similarity=0.256 Sum_probs=53.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..++.+.+.... .+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 5688999998 9999999999999999 899998988766543 33454332 24431 233333333322 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 78999999874
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0095 Score=47.24 Aligned_cols=97 Identities=21% Similarity=0.228 Sum_probs=67.4
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC-CCCCchHHHHHHHHhCCCccE
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP-NDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~-~~~~~~~~~~i~~~~~~~~d~ 266 (378)
.....++.+++++|.| .|..+++.+...|. .|++++.+++..+.+++.+...+.+. -+.+..+. .++|+
T Consensus 11 ~~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y--------~~a~l 80 (134)
T PRK04148 11 NYEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIY--------KNAKL 80 (134)
T ss_pred hcccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHH--------hcCCE
Confidence 3334456889999999 88766666667898 99999999999999999887665532 11122221 27899
Q ss_pred EEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 267 SFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 267 vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
|+.+-..+++...++++-++-+.-++..
T Consensus 81 iysirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 81 IYSIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EEEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 9988887777777777665542444443
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0089 Score=53.42 Aligned_cols=79 Identities=27% Similarity=0.387 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-EeCCCCCCchHHHHHHHHhC--CCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~v 267 (378)
+|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +.++... ..|..+ ..++...+.+... +++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999999999999 899998887765544 4454422 224431 2233333333321 378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
+.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998864
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.02 Score=51.48 Aligned_cols=79 Identities=23% Similarity=0.258 Sum_probs=52.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ...+... . .|..+ ..++...+.+.. .
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 36889999998 9999999999989999 899998887765432 2233222 2 24331 233444444432 2
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 37899998775
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.024 Score=48.19 Aligned_cols=101 Identities=23% Similarity=0.177 Sum_probs=61.5
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCC-Ccc
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDG-GAD 265 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~-~~d 265 (378)
...+++|++||.+|+|.-+.......+..+..++++++.++.. +..+...+ .+.. +....+.+.+..++ ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~--~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFT--DEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCC--ChhHHHHHHHHhCCCCcc
Confidence 3457899999999987655544433343343389999998764 11233222 1222 23333445544444 899
Q ss_pred EEEe-cc----CC------------hHHHHHHHHHhccCCccEEEec
Q 017052 266 YSFE-CI----GD------------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 266 ~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+|+. .. |. ...+..+.++|+++ |+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 9994 21 21 24677788899997 9988753
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.038 Score=47.71 Aligned_cols=113 Identities=16% Similarity=0.094 Sum_probs=70.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.|++|||+|+|.+|..-++.+...|+ .|++++.+.. ....+.+.|--..+.-+ .. ...+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~~~---~~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLARC---FD-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEeCC---CC-HHHh-----CCcEEEEECC
Confidence 57899999999999999999999999 8888865432 22333333321222111 11 1111 2789999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+.++.-.......... |.++++.+.....++.++...-..++++
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~i 121 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVV 121 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEE
Confidence 8865656666666665 8888766554445555554432224444
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.021 Score=51.01 Aligned_cols=79 Identities=16% Similarity=0.232 Sum_probs=52.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE-E--eCCCCCCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-F--LNPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~ 263 (378)
+++++||+|+ |++|..+++.+...|+ +++.+++++++.+..++ .+... . .|..+ ..++...+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 5789999998 9999999999888999 78888888776644443 23222 2 23321 2233333433322 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999883
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.02 Score=44.68 Aligned_cols=100 Identities=17% Similarity=0.247 Sum_probs=66.4
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~~i~~~~ 260 (378)
....+.++++||-+|+|. |..+..+++..+..++++++.++...+.+++ ++...+ +..+ ... ... ..
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~~---~~~-~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD--APE---ALE-DS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc--ccc---cCh-hh
Confidence 455677888999999876 8888899988754489999999988777643 443322 2111 110 011 11
Q ss_pred CCCccEEEeccCC---hHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|+|+-..+. ...+..+.+.|+++ |+++.-
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 2379999865432 24678889999997 998764
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.02 Score=55.84 Aligned_cols=79 Identities=20% Similarity=0.332 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhH-HHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKC-EKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~~~-~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ |++|..+++.+...|+ +|+.++++. ++. +..++++... ..|..+ ..+....+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 5789999988 9999999999999999 888887643 222 3334455433 234441 222333333322 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999883
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0094 Score=53.18 Aligned_cols=79 Identities=22% Similarity=0.286 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--E--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+.++++..+...++.... . .|..+ ..++.+.+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999998 9999999999988999 8999988877665555543222 2 23331 2333333333222 3789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0095 Score=53.22 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=54.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCC-cEEe--CCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV-TEFL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~-~~vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
..++++||+|+ |.+|..++..+...|+ +|+++.++.++.+.+.. .+. ..++ |..+ ..++.+.+.++. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 46799999988 9999999999999999 89999998887654432 121 1222 3321 234444444332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999999883
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.01 Score=52.23 Aligned_cols=79 Identities=22% Similarity=0.255 Sum_probs=51.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-H---HHhCCCcEE-eCCCCCCchHHHHHHHHh--CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-K---AKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~---l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+ . ++..+...+ .|..+ ..++.+.+.+.. .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4789999998 9999999999988899 8999988776532 2 222333222 23321 233333333322 2378
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+|+.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998763
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.011 Score=54.37 Aligned_cols=79 Identities=24% Similarity=0.311 Sum_probs=54.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC--cEE---eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TEF---LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~--~~v---i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ ++++. ... .|..+ ..+..+.+.+.. .++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 899999988876544 44542 111 34431 233333333332 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 8999999884
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0084 Score=53.73 Aligned_cols=83 Identities=20% Similarity=0.252 Sum_probs=55.1
Q ss_pred cCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCc--EE--eCCCCCCchHHHHHHHHhC-
Q 017052 189 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT--EF--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 189 ~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~--~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
....+++++||+|+ |.+|..+++.+...|+ +|+.++++++..+.+.+ ..-. .+ .|..+ ...+.+.+.+...
T Consensus 6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 83 (264)
T PRK12829 6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVER 83 (264)
T ss_pred hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHH
Confidence 34457899999998 9999999999999999 89999998776655443 2211 22 23331 2233333333221
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|+||.+.|.
T Consensus 84 ~~~~d~vi~~ag~ 96 (264)
T PRK12829 84 FGGLDVLVNNAGI 96 (264)
T ss_pred hCCCCEEEECCCC
Confidence 378999998875
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.023 Score=50.35 Aligned_cols=80 Identities=20% Similarity=0.236 Sum_probs=52.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
.+++++||+|+ |.+|..++..+...|+ +++++++++++.+.+ ++.+... ++ |..+ ..++.+.+.+...
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 35789999998 9999999999999999 888888887755433 2233322 22 3331 2223333332221
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 478999999875
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.013 Score=54.42 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE----EeCCCCCCchHHHHHHHHhCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE----FLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~----vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+.+ .+... ..|..++..+..+.+.+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 5899999998 9999999988888899 89999999887654422 22111 234432123334445444444
Q ss_pred -CccEEEeccCC
Q 017052 263 -GADYSFECIGD 273 (378)
Q Consensus 263 -~~d~vid~~g~ 273 (378)
.+|+++++.|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 67799988763
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0077 Score=54.08 Aligned_cols=78 Identities=21% Similarity=0.255 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CCcE-E--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
+++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+++. +... . .|..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999998 9999999999999999 899998888776666543 3211 1 23331 2233333443322 3789
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
+++.+.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999876
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.011 Score=53.30 Aligned_cols=79 Identities=23% Similarity=0.307 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHhC--CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD--GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~~--~~~d~ 266 (378)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +.++.... .|..+ ..++.+.+..... +++|+
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 3678999998 9999999998888899 788888988876544 34442222 24432 2333333433322 47899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
++.+.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9998873
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.014 Score=52.40 Aligned_cols=81 Identities=20% Similarity=0.318 Sum_probs=53.6
Q ss_pred CCCCCeEEEEcc-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcEE--e--CCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGL-G-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTEF--L--NPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~v--i--~~~~~~~~~~~~i~~~ 259 (378)
+.+++++||+|+ | ++|.++++.+...|+ +|+.+++++++.+...+ ++...+ + |..+ ..+....+...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 446789999987 6 799999999999999 79888888776544322 443332 2 3331 22333333332
Q ss_pred h--CCCccEEEeccCC
Q 017052 260 T--DGGADYSFECIGD 273 (378)
Q Consensus 260 ~--~~~~d~vid~~g~ 273 (378)
. .+++|++|.+.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 2 2478999999984
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.006 Score=50.97 Aligned_cols=102 Identities=22% Similarity=0.253 Sum_probs=65.4
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC-CCCC--------------CchHHHHHHH
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-PNDN--------------NEPVQQVIKR 258 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~-~~~~--------------~~~~~~~i~~ 258 (378)
..+|+|+|+|.+|+.|+++|+.+|+ +++..+...++.+.++..+...+.. +.+. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999 9999999999999888887755332 1110 1122222322
Q ss_pred HhCCCccEEEeccC--C---hH-HHHHHHHHhccCCccEEEeccCC
Q 017052 259 ITDGGADYSFECIG--D---TG-MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 259 ~~~~~~d~vid~~g--~---~~-~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
... .+|++|.+.= + +. ..++.++.|+++ ..++++....
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~ 142 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQ 142 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecC
Confidence 211 4688885321 1 11 234667888885 7777776543
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0078 Score=54.06 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=54.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCc-EEe--CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~-~vi--~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ ++.. ..+ |..+ ..+..+.+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 5789999988 9999999999999999 89999998887766544 3321 122 3321 233333444332 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99998873
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.014 Score=51.89 Aligned_cols=79 Identities=20% Similarity=0.341 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCCCcE-E--eCCCCCCchHHHHHHHHhC--CCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
.++++||+|+ |++|..++..+...|+ +|+.++++.. ..+.+++++... . .|..+ ..++...+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999998 9999999999999999 8998887652 233444455322 2 23331 3334434443322 378
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.019 Score=47.82 Aligned_cols=97 Identities=19% Similarity=0.291 Sum_probs=62.4
Q ss_pred hhhchhhhhhHHHHHhhcCCCCCCeEEEEccCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~-vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
...|+...++...+.+...--.|++|||+|+|. +|..++..++..|+ +|+.+.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 444544444444443343446899999999986 69999999999999 7887766521
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.+. .+|+||.+++.+..+.. ..+.++ -.+++++...
T Consensus 80 ~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 2222232 57999999998653332 245654 5666776543
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.012 Score=53.00 Aligned_cols=79 Identities=14% Similarity=0.231 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EE--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EF--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ .+.. .+ .|..+ ...+.+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999998 8999999999988999 89999998876554322 2322 12 34331 2233333333322 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 78999998873
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.016 Score=50.61 Aligned_cols=77 Identities=21% Similarity=0.288 Sum_probs=53.6
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.++..+... ..|..+ ..++...+..+..+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 57899988 9999999998888899 8999999988877777665432 234432 233333333333337899998876
Q ss_pred C
Q 017052 273 D 273 (378)
Q Consensus 273 ~ 273 (378)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 4
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0088 Score=54.24 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=54.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE----EeCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE----FLNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~----vi~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+..... ..|..+ ...+.+.+..... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3678999998 9999999999988999 8999999988877665532221 123331 2233333333222 3689
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.02 Score=52.14 Aligned_cols=44 Identities=25% Similarity=0.372 Sum_probs=38.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
..+++|+|+|+|++|.+++..+...|+.+++.+.++.+|.+.+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 35689999999999999999999999988999999988877654
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.033 Score=48.35 Aligned_cols=105 Identities=18% Similarity=0.206 Sum_probs=63.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh------h-------------hHHH----HHhCCCcE-EeCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP------E-------------KCEK----AKAFGVTE-FLNPNDN 248 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~------~-------------~~~~----l~~~g~~~-vi~~~~~ 248 (378)
+..+|+|.|.|++|.+++..+...|..++..++-++ . |.+. .+..++.- +.-.+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-- 106 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-- 106 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH--
Confidence 456899999999999999999999998888776543 1 1111 12222221 21111
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.-..+.+.++...++|+|+||...-..-..++..+.++.-.++..+...+
T Consensus 107 ~f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 107 DFITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hhhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 111223455555569999999998644434444534333366777765554
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.015 Score=53.34 Aligned_cols=79 Identities=19% Similarity=0.349 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+. +.+... .+ |..+ ..++.+.+.... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999988899 8999999887755443 233322 22 3331 233333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999874
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0098 Score=52.83 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=52.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCC--Cc-EEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFG--VT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g--~~-~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. .+. .. ..+ |.. +..++...+.... .++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVS-DEADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999999988999 7999999987765442 222 11 122 332 1233433333321 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+||.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998874
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.057 Score=46.50 Aligned_cols=111 Identities=14% Similarity=0.066 Sum_probs=65.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-h-HHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-K-CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-~-~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
.|++|||+|+|.+|...+..+...|+ .|+++..+.. . .+++.. +.-.... . .+... .-.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i~~~~-~----~~~~~----~l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKIRWKQ-K----EFEPS----DIVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCEEEEe-c----CCChh----hcCCceEEEEc
Confidence 67899999999999999998888998 8888865421 1 222222 2111111 1 11000 01268999999
Q ss_pred cCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
++.++.-....... .. +.+++..+.+...++-++...-..++++
T Consensus 78 T~d~elN~~i~~~a-~~-~~lvn~~d~~~~~~f~~Pa~~~~g~l~i 121 (202)
T PRK06718 78 TNDPRVNEQVKEDL-PE-NALFNVITDAESGNVVFPSALHRGKLTI 121 (202)
T ss_pred CCCHHHHHHHHHHH-Hh-CCcEEECCCCccCeEEEeeEEEcCCeEE
Confidence 99865544444444 44 6777776655545555555442224443
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.027 Score=51.70 Aligned_cols=79 Identities=23% Similarity=0.251 Sum_probs=49.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--h----HHHHHhCCCcEE---eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--K----CEKAKAFGVTEF---LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~----~~~l~~~g~~~v---i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.+++..+...|+ +|+.+.++.+ + .+.+++.+.... .|..+ ..+..+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 5789999988 9999999999988999 7777655432 1 223344454332 23331 223333333322
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 2378999998873
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0098 Score=53.73 Aligned_cols=45 Identities=31% Similarity=0.426 Sum_probs=40.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
.+|+++||.|||+.+.+++.-++..|+++++++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 358999999999999999999999998799999999998776655
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.016 Score=52.19 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C----CCcE-E--eCCCCCCchHHHHHHHHh-CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-F--LNPNDNNEPVQQVIKRIT-DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~----g~~~-v--i~~~~~~~~~~~~i~~~~-~~ 262 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+.+ + +... . .|..+ ..+..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 5789999998 8999999999999999 89999998877554332 1 3221 2 23331 233333333332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 78999998874
|
|
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.034 Score=48.16 Aligned_cols=104 Identities=24% Similarity=0.293 Sum_probs=71.5
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.++....++||=+|.+ +|..++++|..+. -.+++.+++++++.+.+++ .|.+..+..-- ..+..+.+.+...+
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~gdal~~l~~~~~~ 131 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-GGDALDVLSRLLDG 131 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-cCcHHHHHHhccCC
Confidence 4556688889888863 4788888888775 3289999999999877765 67665322210 12455555553345
Q ss_pred CccEEE-eccC--ChHHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSF-ECIG--DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.||+|| |+-- .+..++.++++++++ |-++.-
T Consensus 132 ~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D 165 (219)
T COG4122 132 SFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD 165 (219)
T ss_pred CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence 899988 5543 256789999999996 776654
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.037 Score=47.35 Aligned_cols=76 Identities=29% Similarity=0.370 Sum_probs=50.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C----CCcEE-eCCCCCCchHHHHHHHHhCCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTEF-LNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~----g~~~v-i~~~~~~~~~~~~i~~~~~~~~ 264 (378)
.++++++|+|+ |.+|+.++..+...|. +|+.+.++.++.+.+.+ + +.... .+.. +..++.+.+ .+.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~-----~~~ 98 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETS-DDAARAAAI-----KGA 98 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC-CHHHHHHHH-----hcC
Confidence 36789999997 9999999988888888 89999898887655433 2 22221 1221 112222222 268
Q ss_pred cEEEeccCCh
Q 017052 265 DYSFECIGDT 274 (378)
Q Consensus 265 d~vid~~g~~ 274 (378)
|+||.++..+
T Consensus 99 diVi~at~~g 108 (194)
T cd01078 99 DVVFAAGAAG 108 (194)
T ss_pred CEEEECCCCC
Confidence 9999988764
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.019 Score=56.57 Aligned_cols=74 Identities=22% Similarity=0.260 Sum_probs=55.3
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.+.+|++|+|+|.|..|++++++++..|+ +|++.+.++.+.+.++++|+..+ ... ...+.+. .+|+|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~----~~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STS----DAVQQIA-----DYALVVT 76 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCc----chHhHhh-----cCCEEEE
Confidence 35678999999999999999999999999 89999987777766777887443 221 1111221 4799998
Q ss_pred ccCCh
Q 017052 270 CIGDT 274 (378)
Q Consensus 270 ~~g~~ 274 (378)
+.|-+
T Consensus 77 SpGi~ 81 (488)
T PRK03369 77 SPGFR 81 (488)
T ss_pred CCCCC
Confidence 88764
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.044 Score=48.08 Aligned_cols=92 Identities=22% Similarity=0.287 Sum_probs=61.1
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHHHhCCCcEEeCCCCCCchHHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGAS--RIIGVDTN----PEK--------CEKAKAFGVTEFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~--~vi~v~~~----~~~--------~~~l~~~g~~~vi~~~~~~~~~~~~i~ 257 (378)
-.+++|+|+|+|+.|..++..+...|++ +++.++++ .++ .++++.++... . ..++.+.+.
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHHh
Confidence 4678999999999999999999999997 89999998 343 33445443211 1 113333332
Q ss_pred HHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
++|++|++++..-.-...++.|.++ ..++.+.
T Consensus 97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 4799999987322224566777765 5555544
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.017 Score=51.17 Aligned_cols=79 Identities=25% Similarity=0.342 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++++... . .|..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999998 9999999999999999 899998887665433 4455432 2 23321 222322223222 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.042 Score=47.36 Aligned_cols=102 Identities=16% Similarity=0.224 Sum_probs=59.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHhCCCcEEeCCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKC----EKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~----~~l~~~g~~~vi~~~~~~ 249 (378)
.+.+|+|+|+|++|..+++.+..+|..+++.++.+. .|. +.++++.....+...+..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 457899999999999999999999998899998762 222 233334432222111001
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. +.+.++. .++|+||+|+++.......-+.+....-.++..+.
T Consensus 100 i~~-~~~~~~~-~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip~i~~~~ 144 (202)
T TIGR02356 100 VTA-ENLELLI-NNVDLVLDCTDNFATRYLINDACVALGTPLISAAV 144 (202)
T ss_pred CCH-HHHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 111 1122221 26899999998865544444444443133555443
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.041 Score=45.29 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=60.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|||+|+|.+|.--++.+...|+ .|+++. ++..+.+++++.-... .+ .+. ...-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~-~~----~~~----~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWK-QK----TFS----NDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEE-ec----ccC----hhcCCCceEEEECCC
Confidence 68899999999999999999988999 788773 4433444455422221 11 111 001127899999988
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 308 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 308 (378)
..+ .+..+...++. +.++...+.....++.++..
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~~d~~~~~~f~~pa~ 113 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNVVSDGTESSFHTPGV 113 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEECCCCCcCcEEeeeE
Confidence 754 45544444444 44555444333344544433
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.017 Score=51.56 Aligned_cols=73 Identities=18% Similarity=0.198 Sum_probs=50.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHhCCCcc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~~~~~d 265 (378)
++++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+.. .+... + .|.. +. +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT--DA---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCC--CH---HHHHHHhcCCCC
Confidence 468999998 9999999999999999 89999888776554432 23221 2 2332 21 223333334799
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
++|.+.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.034 Score=55.31 Aligned_cols=80 Identities=24% Similarity=0.301 Sum_probs=55.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE---EeCCCCCCchHHHHHHHHhC--CCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE---FLNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~---vi~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
..|+++||+|+ +++|..+++.+...|+ +|+.++++.++.+.+.+ ++... ..|..+ ..+..+.+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35789999988 9999999999999999 89999998887765544 44332 224331 2333333443322 478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++|.+.|.
T Consensus 345 d~li~nAg~ 353 (520)
T PRK06484 345 DVLVNNAGI 353 (520)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.016 Score=48.09 Aligned_cols=96 Identities=17% Similarity=0.233 Sum_probs=61.9
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|.|+|| |-+|..+++=|+..|. +|+++++++.|....+.. .++.-+ -.+... +.+. -.++|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~D--ifd~~~-~a~~-l~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKD--IFDLTS-LASD-LAGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeeccc--ccChhh-hHhh-hcCCceEEEeccCC
Confidence 5788998 9999999999999999 999999999988664322 111111 111111 1110 12899999998864
Q ss_pred --H-------HHHHHHHHhcc-CCccEEEeccCCC
Q 017052 275 --G-------MITTALQSCCD-GWGLAVTLGVPKL 299 (378)
Q Consensus 275 --~-------~~~~~~~~l~~-~~G~~v~~g~~~~ 299 (378)
+ ..+.++..++. +-.|+..+|...+
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 1 23345666665 2357888876543
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.018 Score=52.46 Aligned_cols=126 Identities=17% Similarity=0.228 Sum_probs=68.0
Q ss_pred CCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017052 156 SGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (378)
Q Consensus 156 ~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l 234 (378)
...++.|...+.|-.. ...|...+|..... ..+|++||=+|.|. |.+++..+ .+|+++|++++.++...+.+
T Consensus 128 ~~~~I~idPg~AFGTG-----~H~TT~lcl~~l~~~~~~g~~vLDvG~GS-GILaiaA~-klGA~~v~a~DiDp~Av~~a 200 (295)
T PF06325_consen 128 DEIVIEIDPGMAFGTG-----HHPTTRLCLELLEKYVKPGKRVLDVGCGS-GILAIAAA-KLGAKKVVAIDIDPLAVEAA 200 (295)
T ss_dssp TSEEEEESTTSSS-SS-----HCHHHHHHHHHHHHHSSTTSEEEEES-TT-SHHHHHHH-HTTBSEEEEEESSCHHHHHH
T ss_pred CcEEEEECCCCcccCC-----CCHHHHHHHHHHHHhccCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEecCCHHHHHHH
Confidence 3455666665543322 22233333322221 67889999998632 44343333 35888999999999876655
Q ss_pred Hh----CCCcE-E-eCCCCCCchHHHHHHHHhCCCccEEEeccCChH---HHHHHHHHhccCCccEEEeccCCC
Q 017052 235 KA----FGVTE-F-LNPNDNNEPVQQVIKRITDGGADYSFECIGDTG---MITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 235 ~~----~g~~~-v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+. -|... + +... .+. ..+.||+|+-.+-.+. .......+++++ |+++..|....
T Consensus 201 ~~N~~~N~~~~~~~v~~~---~~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~~ 263 (295)
T PF06325_consen 201 RENAELNGVEDRIEVSLS---EDL-------VEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILEE 263 (295)
T ss_dssp HHHHHHTT-TTCEEESCT---SCT-------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEGG
T ss_pred HHHHHHcCCCeeEEEEEe---ccc-------ccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccHH
Confidence 43 23222 2 2111 111 1148999996655432 233445578887 99999887654
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.02 Score=51.09 Aligned_cols=79 Identities=22% Similarity=0.262 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE---EeCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~---vi~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+.++.++.+.+.+ .+... ..|..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5789999998 9999999999999999 89999888776654432 23222 223331 233333333332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998873
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0077 Score=46.27 Aligned_cols=93 Identities=24% Similarity=0.213 Sum_probs=60.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhC----CC-cEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAF----GV-TEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~~----g~-~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
|+++||-+|+|. |..++.+++. .++ ++++++.+++..+.+++. +. +.+.-.. .++ . ......+++|+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~-~~~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-E-FDPDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-H-GGTTTSSCEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-c-cCcccCCCCCE
Confidence 688999999864 8888888884 677 999999999988877652 22 2221111 111 0 11111227999
Q ss_pred EEecc-CCh---------HHHHHHHHHhccCCccEEE
Q 017052 267 SFECI-GDT---------GMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 267 vid~~-g~~---------~~~~~~~~~l~~~~G~~v~ 293 (378)
|+... ... ..++.+.+.|+++ |+++.
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 99765 221 2367788899997 98875
|
... |
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.035 Score=51.05 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=64.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc--------EEeCCCCCCchHHHHHHHHhCC
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--------EFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~--------~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
....++|||+|+|. |..+..++++-+..+|++++.+++-.+.++++-.. ++-.. ..+..+.+++...+
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi---~~Da~~~l~~~~~~ 164 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH---IGDGVEFLKNAPEG 164 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE---EChHHHHHhhccCC
Confidence 35578999998865 55677888887766899999999888888774211 11000 12333344443334
Q ss_pred CccEEE-eccC---------ChHHHHHHHHHhccCCccEEEec
Q 017052 263 GADYSF-ECIG---------DTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 263 ~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+|+|| |+.. +.+.++.+.++|+++ |.++.-+
T Consensus 165 ~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 165 TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 799877 4432 124577888999997 9987643
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.019 Score=51.23 Aligned_cols=78 Identities=26% Similarity=0.296 Sum_probs=51.7
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |.. +...+.+.+.+.. .++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR-NPEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-CHHHHHHHHHHHHHHhCC
Confidence 578999988 9999999999999999 89999888776554432 2322 223 332 1233333333332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.023 Score=50.49 Aligned_cols=78 Identities=29% Similarity=0.385 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE---EeCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~---vi~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |++|+.+++.+...|+ +|+.++++.++.+.+ +..+... ..|..+ ..++.+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999998999 899998887665433 2234332 223321 2233333333322 3
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.028 Score=50.31 Aligned_cols=81 Identities=19% Similarity=0.336 Sum_probs=51.1
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhh-HH----HHHhCCCc--EEe--CCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEK-CE----KAKAFGVT--EFL--NPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~-~~----~l~~~g~~--~vi--~~~~~~~~~~~~i~~~ 259 (378)
+..+++|||+|+ |++|.++++-+... |+ +|+.+++++++ .+ .++..+.. +++ |.. +..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~-~~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDAL-DTDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCC-ChHHHHHHHHHH
Confidence 567789999998 99999999876666 47 88888887764 33 23333431 222 332 123333334443
Q ss_pred hC-CCccEEEeccCC
Q 017052 260 TD-GGADYSFECIGD 273 (378)
Q Consensus 260 ~~-~~~d~vid~~g~ 273 (378)
.. +++|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 32 479998887764
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0092 Score=58.27 Aligned_cols=94 Identities=14% Similarity=0.165 Sum_probs=60.6
Q ss_pred hhcCCCCCCeEE----EEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVV----IFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VL----I~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~ 260 (378)
...+.++|+++| |+|+ |++|.+++|+++..|+ +|+++.+...+....+..+... +++.+ ...+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDAT--GITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECC--CCCCHHHHHHHH
Confidence 346678888888 8876 9999999999999999 8999877666544444445443 44443 222222332211
Q ss_pred CCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 261 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..+...++.+.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 3445566677765 7777776543
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.024 Score=52.55 Aligned_cols=79 Identities=24% Similarity=0.337 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHhC--CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD--GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~~--~~~d~ 266 (378)
.+++|||+|+ |++|.+++..+...|+ +|+.++++.++.+.+ +.+..-.. .|..+ ..+..+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 5789999998 9999999998888999 899998988765443 23321122 23331 2233333443322 47899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0094 Score=53.85 Aligned_cols=99 Identities=18% Similarity=0.246 Sum_probs=61.3
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~ 258 (378)
+.+++++++|++||-+|+| -|..++.+|+..|+ +|++++.++++.+.+++ .|... .+... ++ ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~----D~----~~ 123 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ----DY----RD 123 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----GG
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe----ec----cc
Confidence 4588899999999999987 57778889998899 99999999999887754 55422 11111 11 11
Q ss_pred HhCCCccEEEe-----ccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 259 ITDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 259 ~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+. +.+|.|+. .+|. +..+..+.+.|+|+ |+++.-.
T Consensus 124 ~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 124 LP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred cC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 11 27887764 3442 34577888899997 9987543
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.022 Score=51.56 Aligned_cols=79 Identities=22% Similarity=0.343 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhCCCcEEe--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~----~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ + ++|.++++.+...|+ +|+.+.++++..+ ..+++|....+ |..+ ..+..+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 5789999998 4 899999999999999 8888877653322 22334543322 3331 2333333443322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 478999998873
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.091 Score=47.18 Aligned_cols=105 Identities=17% Similarity=0.198 Sum_probs=62.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-------------------h----HHHHHhCCCcE-EeCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------K----CEKAKAFGVTE-FLNPNDN 248 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-------------------~----~~~l~~~g~~~-vi~~~~~ 248 (378)
.+.+|+|.|.|++|..++..+...|..+++.++.+.- | .+.+++++... +..+++
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~- 107 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD- 107 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec-
Confidence 5678999999999999999999999878888876521 1 12223343322 221211
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
.-. .+.+.++....+|+||||++....-..+.+.+....-.++..+...+
T Consensus 108 ~i~-~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag~ 157 (268)
T PRK15116 108 FIT-PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGG 157 (268)
T ss_pred ccC-hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCccc
Confidence 000 11223333337999999999754444444554443255676665544
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.021 Score=50.91 Aligned_cols=79 Identities=20% Similarity=0.302 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhCCCcE---EeCCCCCCchHHHHHHHHh--CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTE---FLNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~--~~~l~~~g~~~---vi~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
+++++||+|+ +++|.++++.+...|+ +|+.+.++... .+.++..+... ..|..+ ..+..+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999988 9999999999999999 88888765422 23344455432 224432 333444444332 2478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998873
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.025 Score=50.24 Aligned_cols=79 Identities=23% Similarity=0.334 Sum_probs=50.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCc-E--EeCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-E--FLNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~-~--vi~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. ..+.. . ..|..+ ..++.....+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 5688999998 9999999999888998 8999988876543332 12221 2 223331 223333333322 13
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998873
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.025 Score=50.69 Aligned_cols=78 Identities=21% Similarity=0.356 Sum_probs=49.8
Q ss_pred CCCeEEEEccC---hHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhCCCcEEe--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Gag---~vG~~aiqla~~~g~~~vi~v~~~~~~~~----~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
.|+++||+|++ ++|.++++.+...|+ +|+.++++++..+ ..++++....+ |.. +..+..+.+.....
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVR-EPGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcC-CHHHHHHHHHHHHHHc
Confidence 57899999873 899999999988999 7888878754332 22334432333 332 12333333333322
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+.+|+++++.|
T Consensus 87 g~ld~lv~nAg 97 (258)
T PRK07533 87 GRLDFLLHSIA 97 (258)
T ss_pred CCCCEEEEcCc
Confidence 47899998876
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.04 Score=50.06 Aligned_cols=44 Identities=25% Similarity=0.342 Sum_probs=38.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
..++++||+|+|+.+++++..+...|+++++.+.++.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 35789999999999999999888899989999999988876664
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.026 Score=50.36 Aligned_cols=79 Identities=25% Similarity=0.390 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..|... .+ |..+ ..++.+.+.... .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999998888899 899998887665432 2233222 22 3331 333433343332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998874
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.025 Score=49.87 Aligned_cols=79 Identities=25% Similarity=0.396 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
++++|||+|+ |.+|..+++.+...|. +|+.+.+++++.+.+ +..+... . .|..+ ...+...+.+... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4578999998 9999999999888899 799999988764433 3334322 2 23331 2334444443322 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|.++.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998864
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.024 Score=50.68 Aligned_cols=79 Identities=20% Similarity=0.275 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.+.+++++.+.+ ++.+... .+ |..+ ...+.+.+.... .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999999999 888888888654332 3344432 22 3321 222333333221 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.052 Score=47.18 Aligned_cols=101 Identities=21% Similarity=0.328 Sum_probs=66.5
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~ 257 (378)
+....+++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++ .|... ++..+. ...+
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC-----
Confidence 34667789999999998853 6667777777653 289999999987766654 45432 222210 0011
Q ss_pred HHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
...++||+|+-...........++.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01237999875544445667788899997 998764
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.025 Score=50.38 Aligned_cols=79 Identities=20% Similarity=0.373 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++.+.+.... .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4789999998 9999999998888899 899999987764432 3334322 2 23321 223333333321 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.021 Score=51.25 Aligned_cols=79 Identities=22% Similarity=0.267 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE----EeCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE----FLNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~----vi~~~~~~~~~~~~i~~~~-- 260 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ .+... ..|..+ ..+..+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 5789999998 9999999999999999 89999998876544321 21112 124431 233333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|+++++.|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2478999999874
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.031 Score=50.17 Aligned_cols=79 Identities=27% Similarity=0.385 Sum_probs=51.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C--CCc-EEe--CCCCCCchHHHHHHHHh-CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRIT-DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~--g~~-~vi--~~~~~~~~~~~~i~~~~-~~~~ 264 (378)
+++++||+|+ |++|..++..+...|+ +|+++++++++.+.+.. + +.. ..+ |.. +..+..+.+.... .+++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLT-SEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCC-CHHHHHHHHHHHHhcCCC
Confidence 4678999988 9999999999988999 89999998877654432 2 211 122 332 1222222222221 2478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.026 Score=51.16 Aligned_cols=79 Identities=25% Similarity=0.279 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.+++..+...|+ +|+.++++.++.+.+ +..+... . .|..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 888888887665433 2234322 2 23331 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 78999998873
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.041 Score=49.72 Aligned_cols=95 Identities=20% Similarity=0.364 Sum_probs=65.6
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEccCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Gag~-vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+....+..| +..++ -.|++|+|+|.|. +|.-++.++...|+ +|+.+.+.. .
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~ 193 (286)
T PRK14175 137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------K 193 (286)
T ss_pred CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------h
Confidence 4565544444433 55553 4799999999955 99999999999999 888775431 1
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ .+|+||.++|.+..+.. ..++++ ..++++|...
T Consensus 194 ~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 194 DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 2222333 57999999998765554 347775 7788887654
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.019 Score=51.62 Aligned_cols=98 Identities=17% Similarity=0.206 Sum_probs=72.1
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC--
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG-- 272 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g-- 272 (378)
.+|.|+|+|.+|.-++.+|..+|+ .|+..+.|.+|+..++.+-..++....++...+.+.+. +.|++|..+=
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLIp 242 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLIP 242 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEec
Confidence 457788999999999999999999 99999999999999988654443322222445555554 5788887652
Q ss_pred C---h-HHHHHHHHHhccCCccEEEeccCCC
Q 017052 273 D---T-GMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 273 ~---~-~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+ | -..++..+.|.++ +.++++....+
T Consensus 243 gakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred CCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 1 1 2366789999997 99998875544
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.031 Score=50.02 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=51.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCC--c-EE--eCCCCCCchHHHHHHHHhC--CCc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV--T-EF--LNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~--~-~v--i~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
+++|||+|+ |++|..++..+...|+ +|+.+++++++.+.+.+ +.. . .. .|..+ ..++.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999988 9999999999988899 89999998877654433 321 1 12 23331 2344444444322 368
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998773
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.043 Score=50.67 Aligned_cols=91 Identities=21% Similarity=0.428 Sum_probs=60.9
Q ss_pred CeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
.+|.|+|+|.+|.+++..++..|. .+|+++++++++.+.+++.|....... +..+.+ ...|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~-----~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT-----SAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC-----CHHHHh-----cCCCEEEECCCH
Confidence 579999999999999999888874 379999999999888888875322111 111112 257999999875
Q ss_pred hHH---HHHHHHHhccCCccEEEecc
Q 017052 274 TGM---ITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 274 ~~~---~~~~~~~l~~~~G~~v~~g~ 296 (378)
... +......++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 322 23333455554 55666554
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.02 Score=51.15 Aligned_cols=78 Identities=21% Similarity=0.319 Sum_probs=51.6
Q ss_pred CCCeEEEEccC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Gag---~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
.|+++||+|++ ++|.++++.+...|+ +|+.+.++++..+.++++.... . .|..+ ..+..+.+.+.. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 57899999874 899999999988999 8888888755455555543221 2 23331 233333333332 247
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|+++++.|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 999999877
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.037 Score=48.73 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=51.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhCCCcE-EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 268 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~vi 268 (378)
++++||+|+ +++|..+++.+...|+ +|+.+++++++ .+.++..+... ..|..+ ..+..+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999998 9999999999988999 88888887643 34445555432 223331 3344444444332 3689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.031 Score=49.90 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=50.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~v 267 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+.+ +++..+.++..+... ..|..+ ..+..+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999988 9999999999988999 6766644 444444454444322 224431 333444444332 2378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.022 Score=51.00 Aligned_cols=79 Identities=27% Similarity=0.278 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE---EeCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE---FLNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~---vi~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++++||+|+ |++|.++++.+...|+ +|+.+++++...+..++ .+.+. ..|..+ ..+..+.+.+.. .++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4789999988 9999999999989999 89988887644333333 34332 234431 233333444332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++.+.|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 8999998873
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.029 Score=51.06 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=62.6
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC---------cEEeCCCCCCchHHHHHHHHhCC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV---------TEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~---------~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.++++-. +++-.. ..+..+.+.. ..+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~---~~Da~~~l~~-~~~ 149 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV---IGDGIKFVAE-TEN 149 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE---ECchHHHHhh-CCC
Confidence 4568999998864 6667777787677699999999998888876311 111100 1122333333 334
Q ss_pred CccEEEe-ccCC---------hHHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSFE-CIGD---------TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+|+|+- .... .+.++.+.+.|+++ |.++.-
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 8999884 3211 23456778899997 998864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.027 Score=50.27 Aligned_cols=79 Identities=20% Similarity=0.309 Sum_probs=52.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..++..+...|+ +|+.+++++++.+.+ +..+... .+ |..+ ..+..+.+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999998 9999999999988999 899998888766543 2234322 22 3331 223333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 78999998874
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.071 Score=46.87 Aligned_cols=104 Identities=15% Similarity=0.214 Sum_probs=61.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-------------------h----HHHHHhCCCcEEeCCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------K----CEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-------------------~----~~~l~~~g~~~vi~~~~~~ 249 (378)
...+|+|.|.|++|..++..+...|..+++.++.+.- | .+.+++++...-+... .
T Consensus 10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~--~ 87 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV--E 87 (231)
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe--e
Confidence 3468999999999999999999999988888876531 1 1222334432222111 1
Q ss_pred chH-HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 250 EPV-QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 250 ~~~-~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..+ .+...++...++|+|+||+.....-..+.+.+....-.++..+...
T Consensus 88 ~~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g~g 137 (231)
T cd00755 88 EFLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMGAG 137 (231)
T ss_pred eecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeCCc
Confidence 111 1223333334799999999886554445555544424566554433
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK00536 speE spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.019 Score=51.26 Aligned_cols=101 Identities=12% Similarity=-0.072 Sum_probs=66.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEE-ec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF-EC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vi-d~ 270 (378)
..-++|||+|+|- |.++-.++|+- . +|+.++.+++-.+.++++-....-.+++....+...+.+...+.+|+|| |+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 4558999997754 45566788875 2 8999999999999998842211001111122222233333334799866 76
Q ss_pred cCChHHHHHHHHHhccCCccEEEecc
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.-.++..+.+.++|+++ |.++.-+.
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCC
Confidence 66667778899999997 99887644
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.016 Score=52.67 Aligned_cols=75 Identities=13% Similarity=0.113 Sum_probs=51.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
++++|||+|+|+.|++++..+..+|+++++.+.|+.+|.+.+.+ ++... +.... . + +.+... ...+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~--~--~-~~~~~~-~~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE--G--D-SGGLAI-EKAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc--c--h-hhhhhc-ccCCCEEEEC
Confidence 57899999999999999999999999889999999888766543 33211 11111 0 0 111111 1268999999
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
+..
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.029 Score=50.33 Aligned_cols=79 Identities=19% Similarity=0.322 Sum_probs=49.8
Q ss_pred CCCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEE--eCCCCCCchHHHHHHHHhC-
Q 017052 192 SKGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEF--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
-.|+++||+|+ + ++|.++++.+...|+ +|+.+.++++..+.++ +.+.... .|..+ ..+..+.+.+...
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~ 83 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEK 83 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHH
Confidence 35789999988 4 799999988888899 7888777643222232 2343332 34432 3344444443322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
+.+|+++++.|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 47899998876
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.033 Score=49.65 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=52.9
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-E--EeCCCCCCchHHHHHHHHhC--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-E--FLNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~--vi~~~~~~~~~~~~i~~~~~-- 261 (378)
.+++++||+|+ |++|..++..+...|+ +|+.+++++++.+.+.+ .+.. . ..|.. +..++...+.+...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDIT-DEDQCANLVALALERF 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCC-CHHHHHHHHHHHHHHc
Confidence 35789999988 9999999999999999 89999888876544432 2322 1 22333 12334333333322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 368999998864
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.027 Score=51.27 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---CCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~---~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ ++ .+... ++ |..+ ..++.+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999988 9999999999888999 899998876654333 22 23322 12 3321 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999999875
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.038 Score=47.77 Aligned_cols=100 Identities=17% Similarity=0.202 Sum_probs=64.7
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hCCCc---EEeCCCCCCchHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVT---EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~----~~g~~---~vi~~~~~~~~~~~~i~ 257 (378)
.+...++++++||-+|+|. |..++.+++..+ ..+|++++.+++-.+.++ ..+.. .++..+ ..+.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d-----~~~~~~ 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD-----GKRGLE 138 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-----cccCCc
Confidence 4666788999999998853 667777777664 228999999988666554 34542 222221 111110
Q ss_pred HHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+.||+|+-+.........+++.|+++ |+++..
T Consensus 139 --~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 --KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred --cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999886655445566788899997 998763
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.11 Score=44.48 Aligned_cols=104 Identities=16% Similarity=0.203 Sum_probs=61.5
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhC
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
....+++++++||=.|+|. |..++.+++.....+|++++.+++..+.+++ ++...+.... .+..+.+..+.
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhCC-
Confidence 3556778899988887742 4455566665432399999999988776654 5543321111 11222222221
Q ss_pred CCccE-EEeccCC-hHHHHHHHHHhccCCccEEEec
Q 017052 262 GGADY-SFECIGD-TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 ~~~d~-vid~~g~-~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+|. +++.... ...+..+.+.|+++ |+++...
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~ 142 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATA 142 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 22344 4443222 35678888899997 9988774
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.032 Score=49.99 Aligned_cols=78 Identities=21% Similarity=0.328 Sum_probs=51.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHhC--CC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~~--~~ 263 (378)
++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+... ++ |.. +...+...+..... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVS-DAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHHHHcCC
Confidence 367999998 9999999999989998 899999987664433 2233322 22 332 12333333443322 36
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.27 Score=43.00 Aligned_cols=97 Identities=18% Similarity=0.173 Sum_probs=62.2
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-EeCCCCCCchHHHHHHHHhC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi~~~~~~~~~~~~i~~~~~ 261 (378)
....++++++||-.|+|. |..++.+++. +..++++++.+++..+.+++ .+... +++. ++.+. +..
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~-----d~~~~---~~~ 99 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG-----DWARA---VEF 99 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC-----chhhh---ccC
Confidence 344578889999999976 8888888875 55589999999988775544 34322 2221 22221 122
Q ss_pred CCccEEEeccC--------------------C-------hHHHHHHHHHhccCCccEEEe
Q 017052 262 GGADYSFECIG--------------------D-------TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 262 ~~~d~vid~~g--------------------~-------~~~~~~~~~~l~~~~G~~v~~ 294 (378)
+.||+|+-... + ...+..+.+.|+++ |+++.+
T Consensus 100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 37999885311 0 11345667888887 998765
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.034 Score=49.80 Aligned_cols=79 Identities=20% Similarity=0.260 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC-----CCc-EE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF-----GVT-EF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~-----g~~-~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. ++ +.. .. .|..+ ..++...+....
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5789999988 9999999999999999 8999988877655432 22 221 12 23331 233333343332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2378999998873
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.022 Score=51.09 Aligned_cols=80 Identities=23% Similarity=0.322 Sum_probs=54.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHhCCCc--EEeCCCCCCchHHHHHHHHhC--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK----CEKAKAFGVT--EFLNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~----~~~l~~~g~~--~vi~~~~~~~~~~~~i~~~~~--~ 262 (378)
-.|+.|||+|+ +++|++.++=...+|+ +++..+.+++. .+.+++.|-. .+.|.++ .++.....++... |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 36999999988 8999999988888898 88888887654 3344445522 2455553 3444444443333 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|++++.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 78999998873
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.03 Score=50.62 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE---EeCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE---FLNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~---vi~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++++||+|+ +++|.++++.+...|+ +|+.++++++..+.+++ .+... ..|..+ ..+....+.+.. .++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999998888999 89999888433333333 23221 234331 233333344332 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998864
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0082 Score=51.90 Aligned_cols=104 Identities=23% Similarity=0.317 Sum_probs=65.1
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHH----HhCCCcEEe-CCCCCCchHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKA----KAFGVTEFL-NPNDNNEPVQQVIKR 258 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l----~~~g~~~vi-~~~~~~~~~~~~i~~ 258 (378)
+.+...+++|++||-+|+| .|..++-+|+..|.. .|++++++++-.+.+ +.++.+.+. ...+....+
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~------ 136 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW------ 136 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT------
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc------
Confidence 3467779999999999985 377777777776642 689999988755444 446665432 111101111
Q ss_pred HhCCCccEEEeccCChHHHHHHHHHhccCCccEEE-ecc
Q 017052 259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVT-LGV 296 (378)
Q Consensus 259 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~-~g~ 296 (378)
...++||.|+-+.+-+..-...++.|+++ |++|. ++.
T Consensus 137 ~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~ 174 (209)
T PF01135_consen 137 PEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ 174 (209)
T ss_dssp GGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred ccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence 01238999998877766667888999997 99887 444
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.017 Score=52.00 Aligned_cols=77 Identities=21% Similarity=0.364 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.+++++|+|+ |.+|..+++.+...|+ +|++++++.++.+... +... ..|.. +..++.+.+.... .+++|++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~-d~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVT-DDASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecC-CHHHHHHHHHHHHHhCCCCCEEE
Confidence 3568999998 9999999998888899 8999988876554321 2222 22433 2334444444432 23789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99884
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.027 Score=50.86 Aligned_cols=81 Identities=17% Similarity=0.210 Sum_probs=54.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc------EEeCCCC--CCchHHHHHHH
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT------EFLNPND--NNEPVQQVIKR 258 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~------~vi~~~~--~~~~~~~~i~~ 258 (378)
-.|+.+||+|+ .++|.+++..+...|+ +|+.+.++.++.+..++ .+.. .+.|..+ +...+.+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46889999987 8999999999999999 89999999887654432 2332 1234431 11222223333
Q ss_pred HhCCCccEEEeccCC
Q 017052 259 ITDGGADYSFECIGD 273 (378)
Q Consensus 259 ~~~~~~d~vid~~g~ 273 (378)
...|++|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334589999988774
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.031 Score=51.81 Aligned_cols=95 Identities=13% Similarity=0.147 Sum_probs=60.8
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+|||+|+ |.+|..+++.+...|. +|++++++.++...+...+...+. |..+ ...+ .+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~~l----~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PETL----PPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HHHH----HHHHC-CCCEEEECCCC
Confidence 6999998 9999999999988998 899999988776666555654432 3321 1222 22222 68999998753
Q ss_pred hH------------HHHHHHHHhccC-CccEEEeccC
Q 017052 274 TG------------MITTALQSCCDG-WGLAVTLGVP 297 (378)
Q Consensus 274 ~~------------~~~~~~~~l~~~-~G~~v~~g~~ 297 (378)
.. .....++.+... -.+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 10 112344444443 1478877664
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.045 Score=48.98 Aligned_cols=77 Identities=22% Similarity=0.230 Sum_probs=52.7
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CC-Cc-E--EeCCCCCCchHHHHHHHHh---CCCcc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG-VT-E--FLNPNDNNEPVQQVIKRIT---DGGAD 265 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g-~~-~--vi~~~~~~~~~~~~i~~~~---~~~~d 265 (378)
+++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.. ++ .. . ..|..+ ..++.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 57999998 9999999998888999 89999998887665543 32 11 1 234431 233443343332 34789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.048 Score=48.12 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=52.7
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
..++++||+|+ |.+|..++..+...|. +|+++++++++.+.+.+ .+... .+ |..+ ..++...+.....
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 35678999988 9999999999998999 89999998876544322 22221 22 3331 2333333333322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.067 Score=47.91 Aligned_cols=78 Identities=17% Similarity=0.363 Sum_probs=48.7
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-HhC-CCc-EE--eCCCCCCchHHHHHHHHhC
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAF-GVT-EF--LNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~---~~~~~l-~~~-g~~-~v--i~~~~~~~~~~~~i~~~~~ 261 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ +++ +.. .. .|..+ ..+..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 5789999987 4899999999888999 788876543 233323 333 221 12 24432 3344444444332
Q ss_pred --CCccEEEeccC
Q 017052 262 --GGADYSFECIG 272 (378)
Q Consensus 262 --~~~d~vid~~g 272 (378)
+++|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47899998876
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.024 Score=50.01 Aligned_cols=80 Identities=25% Similarity=0.289 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCC-c-E--EeCCCCC-CchH---HHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV-T-E--FLNPNDN-NEPV---QQVIKRI 259 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~-~-~--vi~~~~~-~~~~---~~~i~~~ 259 (378)
++++++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+. +.+. . . ..|..+. ..++ .+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 5689999988 9999999999988999 8999999887665432 2221 1 1 1232211 1222 2233333
Q ss_pred hCCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGD 273 (378)
Q Consensus 260 ~~~~~d~vid~~g~ 273 (378)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999998884
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.04 Score=49.10 Aligned_cols=78 Identities=22% Similarity=0.425 Sum_probs=52.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC----CCcE----EeCCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----GVTE----FLNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~----g~~~----vi~~~~~~~~~~~~i~~~~~- 261 (378)
++++|||+|+ |.+|..++..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+ ..++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 899998887765433 222 2221 224432 3334444444322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
+++|+++.+.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999875
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.08 Score=48.39 Aligned_cols=82 Identities=20% Similarity=0.208 Sum_probs=50.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-H----HHHHhCCCcE-Ee--CCCCCCchHHHHHHHHh
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-C----EKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~----~~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~ 260 (378)
...+++++||+|+ |.+|..++..+...|+ +|+.+.++.++ . +.++..+... ++ |..+ ...+.+.+.+..
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~ 119 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETV 119 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHH
Confidence 3445789999998 9999999998888899 78888776422 2 2223334322 22 3321 223333333322
Q ss_pred C--CCccEEEeccCC
Q 017052 261 D--GGADYSFECIGD 273 (378)
Q Consensus 261 ~--~~~d~vid~~g~ 273 (378)
. +++|++|.+.|.
T Consensus 120 ~~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 120 RELGRLDILVNNAAF 134 (290)
T ss_pred HHcCCCCEEEECCcc
Confidence 2 378999988774
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.035 Score=49.56 Aligned_cols=79 Identities=19% Similarity=0.256 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----C--CCcE-E--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~--g~~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ . +... . .|..+ ..+....+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 89999888876554432 1 2211 1 23331 233333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2478999999974
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.031 Score=50.01 Aligned_cols=81 Identities=23% Similarity=0.309 Sum_probs=52.9
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhCCCcE---EeCCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTE---FLNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~----~l~~~g~~~---vi~~~~~~~~~~~~i~~~~--~ 261 (378)
..+++++|+|+ |.+|..+++.+...|+..|+.++++.++.+ .+++.+... ..|..+ ..++.+.+.... .
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAF 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 35789999998 999999999999999933999988876544 233344332 124331 223333333322 1
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 378999999874
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.035 Score=49.58 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=50.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HH---HHHhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CE---KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~--~~---~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++ .+ .++..+... .+ |.. +..+..+.+.+.. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVT-SKADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 88888776432 22 223334322 22 332 1233443344332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 478999999874
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.033 Score=49.44 Aligned_cols=79 Identities=22% Similarity=0.312 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C--CCc-EEe--CCCCCCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~--g~~-~vi--~~~~~~~~~~~~i~~~~~--~~ 263 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.+.++.++.+.... + +.. ..+ |.. +..+..+.+..... ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVG-SAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCC-CHHHHHHHHHHHHHHcCC
Confidence 4679999988 9999999998888898 89999888765543322 2 221 222 332 12333333333322 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 8999998884
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.051 Score=49.64 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=32.3
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
..++++||+|+|++|++++..+...|+++|+.+.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999999888899996699998885
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.039 Score=49.24 Aligned_cols=79 Identities=23% Similarity=0.322 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
.|+++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ +.++... . .|..+ ..+..+.+.++.. +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 9999999999988998 888888776654433 4444322 2 23331 2233333333322 3689
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.041 Score=49.24 Aligned_cols=79 Identities=23% Similarity=0.414 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. ..+... . .|..+ ..++...+.++.. +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5789999988 9999999999988999 8999999887765443 223221 2 24331 2333333333222 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 78999998874
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.04 Score=49.79 Aligned_cols=77 Identities=26% Similarity=0.306 Sum_probs=52.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CCc-EE--eCCCCCCchHHHHHHHHh--CCCccEE
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVT-EF--LNPNDNNEPVQQVIKRIT--DGGADYS 267 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~~-~v--i~~~~~~~~~~~~i~~~~--~~~~d~v 267 (378)
+++||+|+ |.+|..+++.+...|. +|+++.++.++.+.+++. +.. .+ .|..+ ...+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999988 9999999998888899 899999988877665542 221 11 23331 233334443322 2378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.039 Score=49.84 Aligned_cols=78 Identities=26% Similarity=0.405 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---CC--Cc-EEe--CCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FG--VT-EFL--NPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~---~g--~~-~vi--~~~~~~~~~~~~i~~~~~- 261 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.+.++.++.+.. ++ .+ .. .++ |..+ ..++...+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4689999998 9999999999999999 899998887664432 22 21 11 222 3331 2333334443322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 37899999887
|
|
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.033 Score=54.66 Aligned_cols=77 Identities=23% Similarity=0.375 Sum_probs=55.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHhCCCcEEeCCCCCCch
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP---------------------EKCEKAKAFGVTEFLNPNDNNEP 251 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~---------------------~~~~~l~~~g~~~vi~~~~~~~~ 251 (378)
.+++|+|+|+|+.|+.++..++..|. .|+.++..+ ...+.++++|++..++..-. .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 68899999999999999999999999 788887653 24567788998766554311 11
Q ss_pred HHHHHHHHhCCCccEEEeccCCh
Q 017052 252 VQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 252 ~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+ .+..+. .++|.||.++|..
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCC
Confidence 1 111211 2689999999974
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.038 Score=48.98 Aligned_cols=79 Identities=19% Similarity=0.256 Sum_probs=50.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~--~ 262 (378)
.+++|||+|+ |.+|..++..+...|+ +|++++++.++... ++..+... ++ |.. +..++.+.+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVR-DRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888899 89999998654432 23333222 22 332 12333333333221 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|++|.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998764
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.043 Score=49.54 Aligned_cols=77 Identities=22% Similarity=0.312 Sum_probs=49.8
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE----EeCCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE----FLNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~----vi~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+.+.. .++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCC
Confidence 36899988 9999999999988999 788888887664433 2233322 234431 223333233322 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 8999999874
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.043 Score=44.86 Aligned_cols=74 Identities=26% Similarity=0.302 Sum_probs=50.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~-l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
..+++++|+|+|.+|..+++.+...|..++++++++.++.+. .++++... ..... +..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 457899999999999999999888864489999998877654 44555421 01111 11111 137899999
Q ss_pred ccCCh
Q 017052 270 CIGDT 274 (378)
Q Consensus 270 ~~g~~ 274 (378)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98763
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.12 Score=46.49 Aligned_cols=105 Identities=17% Similarity=0.206 Sum_probs=74.8
Q ss_pred hHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE---Ee--CCCCCCch
Q 017052 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FL--NPNDNNEP 251 (378)
Q Consensus 181 a~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~---vi--~~~~~~~~ 251 (378)
++..+.+..++++|++||=+|+|- |.+++-+|+..|+ +|++++-|+++.+.+++ .|... ++ +++ +
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~r----d 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYR----D 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccc----c
Confidence 344466889999999999999864 7778899999999 99999999998877755 55541 11 222 1
Q ss_pred HHHHHHHHhCCCccEEE-----eccCC---hHHHHHHHHHhccCCccEEEeccCCCC
Q 017052 252 VQQVIKRITDGGADYSF-----ECIGD---TGMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 252 ~~~~i~~~~~~~~d~vi-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
+. +.||-|+ +.+|. ++.+..+.+.|+++ |++++-......
T Consensus 134 ~~--------e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 FE--------EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred cc--------cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11 1467665 33443 35677888899997 998877655543
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.043 Score=48.89 Aligned_cols=73 Identities=21% Similarity=0.363 Sum_probs=46.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEe--CCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++ +..+... .+....+ |.. +. +.+.+. -+++|++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~--~~---~~~~~~-~~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECG--KE---ESLDKQ-LASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCC--CH---HHHHHh-cCCCCEEE
Confidence 4689999998 9999999999999999 888888876 2222211 1111222 332 11 122222 23689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99874
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.053 Score=45.30 Aligned_cols=79 Identities=22% Similarity=0.259 Sum_probs=50.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
++++++|+|+ +++|..++..+...|+ +|+.++++.+..+.. ++.+... .+ |.. +..++.+.+.+.. .+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDME-KQGDWQRVISITLNAFS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHHHHcC
Confidence 5789999988 8899999998888898 899988877654322 2234332 22 222 1223333332221 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 78999988774
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.047 Score=49.50 Aligned_cols=103 Identities=18% Similarity=0.275 Sum_probs=65.0
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~---~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ +++|+++++.+...|+ +|+.++++.+ +.+.+ ++++.... .|..+ ..+..+.+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4789999987 4899999999988999 8888888753 22222 34453332 34432 233433444432 2
Q ss_pred CCccEEEeccCCh--------------H---------------HHHHHHHHhccCCccEEEeccCC
Q 017052 262 GGADYSFECIGDT--------------G---------------MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 262 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+.+|+++++.|.. + ..+..+..+.++ |+++.++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~ 146 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG 146 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence 4789999988731 0 123445567765 8999887543
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.081 Score=47.99 Aligned_cols=130 Identities=19% Similarity=0.248 Sum_probs=73.1
Q ss_pred CceeeCCCCCChhhhhhhchhhhhhHHHHHhh-cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 157 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
..+++|...+.+ .......|++ +|.-. ..+++|++||=+|+|. |.++|. |..+|+.++++++.++...+.++
T Consensus 130 ~~~i~lDPGlAF----GTG~HpTT~l-cL~~Le~~~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 130 ELNIELDPGLAF----GTGTHPTTSL-CLEALEKLLKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred ceEEEEcccccc----CCCCChhHHH-HHHHHHHhhcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEecCCHHHHHHHH
Confidence 456667666633 2332333333 33222 2367999999998842 554444 34567778999999987665554
Q ss_pred h----CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC-h--HHHHHHHHHhccCCccEEEeccCCC
Q 017052 236 A----FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD-T--GMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 236 ~----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~--~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
. -+.+..+... .+ ........+.+|+|+-.+=. + .+.......++++ |++++.|....
T Consensus 203 eNa~~N~v~~~~~~~----~~-~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~~ 267 (300)
T COG2264 203 ENARLNGVELLVQAK----GF-LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILED 267 (300)
T ss_pred HHHHHcCCchhhhcc----cc-cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehHh
Confidence 3 3443211110 00 01111122489998854321 1 2345667788997 99999986554
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.022 Score=47.13 Aligned_cols=78 Identities=26% Similarity=0.358 Sum_probs=50.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC--hhhHH-H---HHhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN--PEKCE-K---AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~--~~~~~-~---l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++||+|+ +++|+.+++.+...|..+|+.+.++ .++.+ + ++..+... ++ |.. +..+....+.+.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-DPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-SHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence 47899998 9999999988888777688888888 34333 2 23345322 22 222 1334444444443 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|++|.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 78999998885
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.064 Score=45.56 Aligned_cols=95 Identities=18% Similarity=0.200 Sum_probs=59.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhCCCcc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
++++.+||-+|+|. |..++.+++.. +. +|++++.+++..+.+++ .+.+.+. +. ..+..+ +.. .+.+|
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i~-~~--~~d~~~-~~~--~~~fD 114 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNVT-VV--HGRAEE-FGQ--EEKFD 114 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCEE-EE--eccHhh-CCC--CCCcc
Confidence 55689999998753 55555566544 45 99999999987766653 4544321 11 111111 111 23799
Q ss_pred EEEeccCC--hHHHHHHHHHhccCCccEEEe
Q 017052 266 YSFECIGD--TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 266 ~vid~~g~--~~~~~~~~~~l~~~~G~~v~~ 294 (378)
+|+-.... ...+..+.+.++++ |+++.+
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~ 144 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLAL 144 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 98853222 35677888999997 998877
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.1 Score=47.78 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=49.0
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHH----HhCCCcE---EeCCCCCCchHHHHHHHHhC
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~~~~~l----~~~g~~~---vi~~~~~~~~~~~~i~~~~~ 261 (378)
-+++++||+|+ |++|.++++.+...|+ +|+.+.++. ++.+.+ +..+... ..|..+ ..+..+.+.+...
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~ 124 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHK 124 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHH
Confidence 36789999998 9999999999999999 788776532 222222 2334322 223331 2333333443322
Q ss_pred --CCccEEEeccC
Q 017052 262 --GGADYSFECIG 272 (378)
Q Consensus 262 --~~~d~vid~~g 272 (378)
+++|+++.+.|
T Consensus 125 ~~g~id~lv~~Ag 137 (294)
T PRK07985 125 ALGGLDIMALVAG 137 (294)
T ss_pred HhCCCCEEEECCC
Confidence 37899998876
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.049 Score=50.40 Aligned_cols=79 Identities=23% Similarity=0.255 Sum_probs=50.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC----C-Cc-EE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----G-VT-EF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~----g-~~-~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.|++++|+|+ +++|.+++..+...|+ +|+.+.++.++.+.+ +++ + .. .+ .|..+ ..+..+.+.++.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4789999998 9999999998888999 898888987765433 221 1 11 12 24431 222333333322
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2378999988773
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.044 Score=48.89 Aligned_cols=79 Identities=22% Similarity=0.340 Sum_probs=50.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--CCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.. ..+.+++++... .+ |.. +..+..+.+.+... +++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLR-KIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhCCC
Confidence 4789999988 9999999999999999 8888765432 223344444322 22 332 12333333433322 378
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.11 Score=45.92 Aligned_cols=79 Identities=14% Similarity=0.184 Sum_probs=48.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-~~~----~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ |.+|..+++.+...|+ +++.+.++.+ +.+ .+++.+... .+ |.. +..++.+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVA-DAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 5689999988 9999999999999999 6766655432 222 223334322 22 332 1233333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.048 Score=48.82 Aligned_cols=76 Identities=24% Similarity=0.354 Sum_probs=50.1
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEEe--CCCCCCchHHHHHHHHh--CCCccE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~vi--~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +.+....+ |.. +..+..+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~-d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLS-DKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCC-CHHHHHHHHHHHHHhcCCCCE
Confidence 6899988 9999999999988999 8999988877654332 22322222 332 1233444444332 247899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.045 Score=49.14 Aligned_cols=80 Identities=16% Similarity=0.292 Sum_probs=50.4
Q ss_pred CCCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHHHHHHHhC-
Q 017052 192 SKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
-+++++||+|+ +++|.++++.+...|+ +|+.+.++++..+.+++ ++.... .|.. +..+..+.+.+...
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~ 81 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVA-SDDEINQVFADLGKH 81 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCC-CHHHHHHHHHHHHHH
Confidence 35789999984 5899999999989999 78877665443333333 343222 2333 23344444443322
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (261)
T PRK08690 82 WDGLDGLVHSIGF 94 (261)
T ss_pred hCCCcEEEECCcc
Confidence 479999998864
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.035 Score=49.47 Aligned_cols=75 Identities=23% Similarity=0.354 Sum_probs=49.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc-EE--eCCCCCCchHHHHHHHHh--CCCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EF--LNPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~-~v--i~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
.++++||+|+ |++|..+++.+...|+ +|+.++++.++ +..+.. .. .|..+ ..++.+.+.... .+++|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 5789999988 9999999999988999 89999887765 112221 12 23331 233333343332 237899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998873
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.041 Score=49.31 Aligned_cols=79 Identities=28% Similarity=0.325 Sum_probs=51.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+.++.+..+.+++ .+... . .|..+ ..+....+.++. .++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999988999 89999888754443333 23221 2 23331 223333333332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998873
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.029 Score=46.07 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=41.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
.|..|+++|+ -++|+..++-+...|+ +||++.++++.+..+-+.-..+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~~ 54 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPSL 54 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCcc
Confidence 5788999998 6799999999999999 9999999999988776654443
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.048 Score=48.33 Aligned_cols=78 Identities=23% Similarity=0.336 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEe--CCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFL--NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi--~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ .+.. .++ |.. +...+.+.+..... +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDIT-DRDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCC-CHHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999988999 89999888776554322 2322 222 332 12333333433322 3
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999887
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.038 Score=56.46 Aligned_cols=76 Identities=25% Similarity=0.339 Sum_probs=56.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhCCCcEEeCCCC-CCc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPND-NNE 250 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~---------------------~~~~l~~~g~~~vi~~~~-~~~ 250 (378)
.+++|+|+|+|..|+.++..++..|. +|+.++..+. ..+.++++|++..++..- .+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888877652 567778899877665531 112
Q ss_pred hHHHHHHHHhCCCccEEEeccCCh
Q 017052 251 PVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+. ++. .++|.||.++|..
T Consensus 388 ~~~----~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCCC
Confidence 222 221 2689999999863
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.046 Score=48.47 Aligned_cols=77 Identities=26% Similarity=0.410 Sum_probs=51.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----C--CCc-EE--eCCCCCCchHHHHHHHHhC--
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVT-EF--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~--g~~-~v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.. . +.. ++ .|..+ ..++.+.+.++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 578999998 9999999988888898 89888888876654432 1 211 12 24431 3344444444322
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37899999886
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.084 Score=46.41 Aligned_cols=104 Identities=21% Similarity=0.266 Sum_probs=72.8
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~~ 260 (378)
...+..+|.+||=+|+| .|..++.+++..|..+|++++.+++-++.+++ .+... .+..+ . +.+ .+.
T Consensus 45 ~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~d-----A-e~L-Pf~ 116 (238)
T COG2226 45 SLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGD-----A-ENL-PFP 116 (238)
T ss_pred HhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEec-----h-hhC-CCC
Confidence 44556689999998775 58999999999986699999999998887765 22221 11111 0 011 122
Q ss_pred CCCccEEEeccCC------hHHHHHHHHHhccCCccEEEeccCCC
Q 017052 261 DGGADYSFECIGD------TGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 261 ~~~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+..||+|.-+.|- +..+.++.+.++|+ |+++.+.....
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 3378888766652 46789999999997 99998876654
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.063 Score=46.95 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=49.8
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+++|+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++++...+ .|..+ ..++.+.+..+. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHHh-hcCcEEEECCC
Confidence 5899988 9999999999988999 899898988776544 44444332 34431 223333333332 26899998765
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.043 Score=48.95 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=51.3
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.. .+... . .|..+ .....+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999988 9999999999999999 89999888766544322 23222 1 23331 233333333332 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8999998864
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.047 Score=48.55 Aligned_cols=79 Identities=19% Similarity=0.318 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEe--CCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFL--NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi--~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |.+|.++++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ +..+ ..+....+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999988 9999999999999999 89999988766544322 2322 222 3321 2333333333322 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 68999988873
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.033 Score=50.35 Aligned_cols=78 Identities=17% Similarity=0.209 Sum_probs=52.1
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCc-EEe--CCCCCCchHHHHHHHHh--CCCccE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~-~vi--~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
+++|||+|+ |.+|..+++.+...|. +|+.++++.++.+.+.+ ++.. ..+ |.. +..++.+.+.... .+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVT-DRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCC-CHHHHHHHHHHHHHHcCCCCE
Confidence 568999998 9999999998888898 89999998887665544 2221 122 332 1233333333322 237899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.043 Score=49.71 Aligned_cols=79 Identities=19% Similarity=0.259 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC--c-EE--eCCCCCCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EF--LNPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~--~-~v--i~~~~~~~~~~~~i~~~~~--~~ 263 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ +.++. . .. .|..+ ..++.+.+..... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 4789999988 9999999998888899 899888876654433 33322 1 12 23331 2333333333222 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 8999998864
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.12 Score=41.66 Aligned_cols=99 Identities=15% Similarity=0.217 Sum_probs=56.7
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHhCCCcEEe-CCCCCCch
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKC----EKAKAFGVTEFL-NPNDNNEP 251 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~----~~l~~~g~~~vi-~~~~~~~~ 251 (378)
+|+|.|+|++|..++..+...|..+++.++.+. .|. +.++++....-+ .++. ...
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~-~~~ 79 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPE-GIS 79 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEee-ecC
Confidence 589999999999999999999998888887652 121 223334432211 1110 000
Q ss_pred HHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 252 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 252 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.. ...++ -.++|+|++|...........+.+...+-.++..+..
T Consensus 80 ~~-~~~~~-~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~~~~~ 123 (143)
T cd01483 80 ED-NLDDF-LDGVDLVIDAIDNIAVRRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred hh-hHHHH-hcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 00 01111 1378999999988655444555555541335555443
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.084 Score=47.19 Aligned_cols=77 Identities=23% Similarity=0.318 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCc-EEe--CCCCCCchHHHHHHHHhCCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVT-EFL--NPNDNNEPVQQVIKRITDGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~-~vi--~~~~~~~~~~~~i~~~~~~~ 263 (378)
.++++||+|+ +++|..+++.+...|+ +|+.++++.++.+.+.+ .+.. ..+ |.. +..++.+.+.. .++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~--~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLS-SPEAREQLAAE--AGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-CHHHHHHHHHH--hCC
Confidence 4789999998 9999999999988999 89999998776554322 2322 122 332 12233333322 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 8999998874
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.057 Score=48.16 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=50.7
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCc--EE--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT--EF--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~--~v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. .+... .. .|..+ ..++...+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 568999998 9999999988888898 8999999887765443 23211 12 23321 2233333333221 3689
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.054 Score=48.32 Aligned_cols=79 Identities=24% Similarity=0.374 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++.+... . .|..+ ..++...+..... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5889999988 9999999998888899 899999987654432 2334222 2 23331 3334444443322 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999988874
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.053 Score=50.32 Aligned_cols=78 Identities=24% Similarity=0.323 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC---c-EE--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~---~-~v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+ +++.. . .. .|..+ ..+..+.+.++. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 5788999988 9999999998888898 899998888775443 33321 1 12 23331 223333333322 23
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6899999887
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.064 Score=48.54 Aligned_cols=78 Identities=18% Similarity=0.293 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCC---cEEe--CCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV---TEFL--NPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~---~~vi--~~~~~~~~~~~~i~~~~~- 261 (378)
.++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+ .+. -.++ |..+ .+++.+ +.+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~ 78 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKE 78 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHh
Confidence 3578999998 9999999998888899 89999888776544432 221 1122 3331 233433 444322
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999998874
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.054 Score=48.44 Aligned_cols=79 Identities=22% Similarity=0.231 Sum_probs=50.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH---HHHhCCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE---KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~---~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+.++++..+ .+.+.+... . .|..+ .......+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 8888877732222 222334322 2 23331 223333333332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.079 Score=50.31 Aligned_cols=79 Identities=20% Similarity=0.291 Sum_probs=59.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCcc
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
+..+--.+++|||+|+|-+|..++.-+...|...++...|+.+|.+ +++++|+. ++.++ ++.+.+. .+|
T Consensus 171 ~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~----el~~~l~-----~~D 240 (414)
T COG0373 171 RIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE----ELLEALA-----EAD 240 (414)
T ss_pred HHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH----HHHHhhh-----hCC
Confidence 4444457899999999999999999999999889999999988865 55778843 33222 2222332 589
Q ss_pred EEEeccCChH
Q 017052 266 YSFECIGDTG 275 (378)
Q Consensus 266 ~vid~~g~~~ 275 (378)
+||.+++.+.
T Consensus 241 vVissTsa~~ 250 (414)
T COG0373 241 VVISSTSAPH 250 (414)
T ss_pred EEEEecCCCc
Confidence 9999998753
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.059 Score=48.12 Aligned_cols=79 Identities=22% Similarity=0.386 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-Ee--CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ ++... .+ |.. +..+..+.+.+.. .+++|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVT-RQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCC-CHHHHHHHHHHHHHHcCCCC
Confidence 4678999998 9999999999998999 89999998887655433 33221 22 332 1233444444332 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.078 Score=46.15 Aligned_cols=75 Identities=13% Similarity=0.121 Sum_probs=47.5
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCC--CccEEEe
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFE 269 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~--~~d~vid 269 (378)
.+++||+|+ |.+|..++..+... . +|++++++.++.+.+.+ .....++..+ -.+ .+.+.++... +.|++|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D--~~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVD--LTD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecC--CCC-HHHHHHHHHhcCCCCEEEE
Confidence 368999988 99999999877666 6 89999998877655543 2112223222 111 1223332222 6899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9874
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.047 Score=48.65 Aligned_cols=79 Identities=24% Similarity=0.338 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
++++|||+|+ |.+|..+++.+...|. +|+.+++++++.+.+. +.+... . .|.. +..++.+.+..+. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVT-DEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-CHHHHHHHHHHHHHHcC
Confidence 4679999998 9999999998888899 8999999887654432 223222 2 2333 1233333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.+.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 78999988863
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.06 Score=49.56 Aligned_cols=78 Identities=21% Similarity=0.293 Sum_probs=50.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC-----CCc-EE--eCCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF-----GVT-EF--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~-----g~~-~v--i~~~~~~~~~~~~i~~~~~- 261 (378)
.+++|||+|+ |++|..+++.+...|+ +|+.+.++.++.+.+ +.+ +.. .. .|..+ ..+..+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5789999998 9999999998888899 888888887764432 111 111 12 23331 2333333443322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 93 ~~~iD~li~nAg 104 (306)
T PRK06197 93 YPRIDLLINNAG 104 (306)
T ss_pred CCCCCEEEECCc
Confidence 37899999887
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.062 Score=48.36 Aligned_cols=78 Identities=14% Similarity=0.262 Sum_probs=49.3
Q ss_pred CCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
.|+++||+|+ + ++|.++++.+...|+ +|+.+.++++..+.+++ .+.... .|.. +..+..+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVA-EDASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCC-CHHHHHHHHHHHHhhc
Confidence 5789999987 4 799999999888999 78877776422233332 232222 2333 13344444444332
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+.+|+++++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 47899999987
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.041 Score=48.46 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=49.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-Ee--CCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.++++||+|+ |.+|..+++.+...|+.+|++++++.++.+. .+... ++ |..+ ..++.+.+... +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence 5678999988 9999999999998998678888888766543 22221 22 3321 22232222221 2689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
|
|
| >PLN02476 O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.08 Score=47.73 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=66.7
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh-
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~- 260 (378)
...+..+.++||=+|.+ +|..++.+|+.++ -.++++++.+++..+.+++ .|..+-+... ..+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li--~GdA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVK--HGLAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHh
Confidence 44566778899999873 4667777777663 1279999999988776644 5665323222 223334444432
Q ss_pred ---CCCccEEE-eccCC--hHHHHHHHHHhccCCccEEEe
Q 017052 261 ---DGGADYSF-ECIGD--TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ---~~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.||.|| |.-.. ...++.++++++++ |.++.=
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 23799887 44322 35677889999996 887654
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.067 Score=51.09 Aligned_cols=90 Identities=24% Similarity=0.341 Sum_probs=55.1
Q ss_pred EEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHh--CCC--cE-EeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 197 VVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA--FGV--TE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 197 VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~--~g~--~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
|+|+|+|.+|..+++.+...+-. ++++.+++.++.+.+.+ .+. .. .+|.. +.. .+.++.. +.|+|++|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~----~~~-~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVN----DPE-SLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TT----THH-HHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecC----CHH-HHHHHHh-cCCEEEEC
Confidence 68899999999999998877643 79999999999777654 222 11 23332 222 2444332 56999999
Q ss_pred cCChHHHHHHHHHhccCCccEEE
Q 017052 271 IGDTGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~ 293 (378)
+|.......+-.|+..+ -.+++
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 98753444444555554 66666
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.17 Score=47.11 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=64.2
Q ss_pred CCCCeEEEEccChHHHHHHHHH-HHcCCCeEEEEcCChhhHHHHHh-----CCCcEEeCCCCCCchHHHHHHHHhCCCcc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGA-KARGASRIIGVDTNPEKCEKAKA-----FGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla-~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
+..++++|+|+|..|...+..+ ...++++|.++.+++++.+.+.+ ++.... .++ ++.+.+. ..|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~----~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVN----SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeC----CHHHHHh-----cCC
Confidence 4567899999999998777554 45688899999999888765432 343322 222 2333332 589
Q ss_pred EEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 266 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+|+.|+++...+- . ..++++ -++..+|....
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~p 225 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFMP 225 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCCc
Confidence 9999998754332 3 778885 77878886543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.063 Score=47.82 Aligned_cols=79 Identities=28% Similarity=0.385 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ +..+... . .|..+ ..++.+.+..+. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999999988999 899998887665433 2223222 2 23331 233333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 78999998874
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.058 Score=49.73 Aligned_cols=78 Identities=24% Similarity=0.299 Sum_probs=49.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----------hhH----HHHHhCCCcE-E--eCCCCCCchHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----------EKC----EKAKAFGVTE-F--LNPNDNNEPVQQ 254 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----------~~~----~~l~~~g~~~-v--i~~~~~~~~~~~ 254 (378)
.|+++||+|+ +++|+++++.+...|+ +|+.++++. ++. +.++..+... . .|..+ ..+...
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHHHH
Confidence 5789999988 8999999999999999 888887763 222 2233344322 2 23331 233433
Q ss_pred HHHHHhC--CCccEEEecc-C
Q 017052 255 VIKRITD--GGADYSFECI-G 272 (378)
Q Consensus 255 ~i~~~~~--~~~d~vid~~-g 272 (378)
.+.+... +++|++|++. |
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHcCCccEEEECCcc
Confidence 3433322 4789999887 5
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.072 Score=48.59 Aligned_cols=80 Identities=23% Similarity=0.253 Sum_probs=50.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHH-HH---HhCCCcE-E--eCCCCCCchHHH
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCE-KA---KAFGVTE-F--LNPNDNNEPVQQ 254 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~---------~~~~-~l---~~~g~~~-v--i~~~~~~~~~~~ 254 (378)
.+++++||+|+ +++|.++++.+...|+ +|+.++++. ++.+ .+ +..+... . .|..+ ..+..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 46789999988 9999999998888999 787776653 3222 22 2233322 2 23331 233333
Q ss_pred HHHHHh--CCCccEEEeccCC
Q 017052 255 VIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 255 ~i~~~~--~~~~d~vid~~g~ 273 (378)
.+.+.. .+++|++|++.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 444332 2478999998874
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.075 Score=46.67 Aligned_cols=78 Identities=17% Similarity=0.183 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.|+++||+|+ +++|++++..+...|+ +|+.+.++.++.+.+ ++.+... . .|.. +.++..+.+.+.. -+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDF-SQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCC-CHHHHHHHHHHHHHHhC
Confidence 4789999998 8999999999989999 899998888776443 2334332 1 2332 1333333333332 24
Q ss_pred -CccEEEeccC
Q 017052 263 -GADYSFECIG 272 (378)
Q Consensus 263 -~~d~vid~~g 272 (378)
.+|++|.+.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6899999886
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.074 Score=48.13 Aligned_cols=81 Identities=17% Similarity=0.345 Sum_probs=51.0
Q ss_pred CCCCCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhCCCcEEe--CCCCCCchHHHHHHHHh
Q 017052 190 DISKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEFL--NPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 190 ~~~~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~---~~~~l-~~~g~~~vi--~~~~~~~~~~~~i~~~~ 260 (378)
+.-.++++||+|+ +++|+++++.+...|+ +|+.+.++++ +.+.+ ++++....+ |.. +..+..+.+.++.
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~ 83 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVT-DEASIDAVFETLE 83 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCC-CHHHHHHHHHHHH
Confidence 3446789999987 4899999999999999 8887776642 22222 334532222 333 1233444444432
Q ss_pred C--CCccEEEeccC
Q 017052 261 D--GGADYSFECIG 272 (378)
Q Consensus 261 ~--~~~d~vid~~g 272 (378)
. +++|+++++.|
T Consensus 84 ~~~g~iD~lv~nAG 97 (272)
T PRK08159 84 KKWGKLDFVVHAIG 97 (272)
T ss_pred HhcCCCcEEEECCc
Confidence 2 47899999876
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.056 Score=48.31 Aligned_cols=78 Identities=21% Similarity=0.288 Sum_probs=50.1
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----CCCc--EEe--CCCCCCchHHHHHHHHh--C
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A----FGVT--EFL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~----~g~~--~vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. + .+.. ..+ |.. +..+....+.++. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADAT-SEQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCC-CHHHHHHHHHHHHHHc
Confidence 578999988 9999999999988999 8999988876543332 1 2211 222 332 1223333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999998873
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.037 Score=49.62 Aligned_cols=74 Identities=20% Similarity=0.282 Sum_probs=49.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~--~~~d~vi 268 (378)
.|+++||+|+ +++|.+++..+...|+ +|+.+++++++.. .... ..|..+ ..+..+.+.+... +++|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999998 9999999999999999 8988887765432 1111 224431 2333344443322 3789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98773
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.05 Score=47.73 Aligned_cols=74 Identities=19% Similarity=0.237 Sum_probs=49.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc-EEeCCCCCCchHHHHHHHHhCC-CccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~-~vi~~~~~~~~~~~~i~~~~~~-~~d~vid 269 (378)
.++++||+|+ |.+|..+++.+...|+ +|+.+.++.++. .... ...|..+ ..++.+.+.+.... +.|++|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence 4678999998 9999999999989998 899998876541 1111 1223331 33344444444333 6899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.22 Score=44.23 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=30.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKC 231 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~ 231 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+. ++.++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4789999988 9999999999999999 777653 444443
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.049 Score=54.22 Aligned_cols=79 Identities=18% Similarity=0.339 Sum_probs=55.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE---EeCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~---vi~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++++... ..|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 6789999988 9999999999999999 899998888776544 4455432 234431 334444444432 24789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998764
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.066 Score=48.46 Aligned_cols=78 Identities=32% Similarity=0.413 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+++++||+|+ |++|+++++.+...|+ +|+.++++.++.+.+ +..+... . .|..+ ..+....+.+... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 899998887655433 2233321 2 23331 2233333333322 4
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7899999887
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.069 Score=47.44 Aligned_cols=76 Identities=14% Similarity=0.295 Sum_probs=51.6
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-E--eCCCCCCchHHHHHHHHhC--CCccEEE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRITD--GGADYSF 268 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d~vi 268 (378)
+++|+|+ |.+|.+++..+...|+ +|+.+++++++.+.+.. ++... . .|..+ ..++.+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899998 9999999999988999 89999998887765543 34322 1 23331 2333333433322 3789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 88764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.068 Score=47.09 Aligned_cols=80 Identities=21% Similarity=0.332 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-EeCCCC-CCchHHHHHHHHhC--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FLNPND-NNEPVQQVIKRITD--GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi~~~~-~~~~~~~~i~~~~~--~~ 263 (378)
.++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ +..+... ++..+- +..++.+.++.... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999988 9999999998888999 899999987665433 2233222 222221 12333334443322 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998864
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.085 Score=46.74 Aligned_cols=36 Identities=33% Similarity=0.473 Sum_probs=31.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+.+|+|.|+|++|..+++.+..+|..+++.++.+.
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 347899999999999999999999998888887644
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.081 Score=45.73 Aligned_cols=113 Identities=12% Similarity=0.047 Sum_probs=72.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.|++|||+|+|.+|.-=+.+....|+ +++++..+. +....+..-+. +... +..+.. ..+ .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~---i~~~--~~~~~~--~~~--~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGK---IKWI--EREFDA--EDL--DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcC---cchh--hcccCh--hhh--cCceEEEEeC
Confidence 67899999999999999999999999 788885554 22222222221 1111 111110 001 1488999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+.+..-+...+.+.+. +.++++-+.....++.++...-...+++
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~i 124 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQI 124 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEE
Confidence 9877767777777776 9999887766655565555443334444
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.15 Score=44.41 Aligned_cols=103 Identities=18% Similarity=0.245 Sum_probs=64.4
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ +|.+.+.... .+..+...
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~---~d~~~~~~-- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV---GDGTQGWE-- 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE---CCcccCCc--
Confidence 34566789999999998753 6666677776542 269999999887766543 4543321111 01111000
Q ss_pred hCCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 260 TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+.||+|+-............+.|+++ |+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1137998875444445666788899997 998764
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.078 Score=46.77 Aligned_cols=79 Identities=23% Similarity=0.276 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+++++||+|+ |.+|..++..+...|+ .|+...++.++.+.+ ..++... ++ |.. +...+.+.+.+.. .+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLS-DRDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCC-CHHHHHHHHHHHHHHcCCCC
Confidence 4689999998 9999999999988998 888888877766544 3343322 22 332 1223333333322 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.067 Score=47.52 Aligned_cols=78 Identities=23% Similarity=0.349 Sum_probs=51.2
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
++++||+|+ |.+|..++..+...|. +|++++++.++.+.+.. .+... . .|..+ ..++...+..+. .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 468999998 9999999999888999 89999998876655433 22221 1 24431 233433333332 236
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
.|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999987763
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.096 Score=46.27 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=48.3
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-cE--EeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TE--FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-~~--vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+++||+|+ |++|..++..+...|+ +|+.+++++++.+.+.+.+. .. ..|..+ ..++.+.+.+.. ...|+++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhcc-cCCCEEEEc
Confidence 57899998 9999999888888899 89999999888776655332 12 223331 233333333321 245666655
Q ss_pred cC
Q 017052 271 IG 272 (378)
Q Consensus 271 ~g 272 (378)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.21 Score=44.20 Aligned_cols=103 Identities=19% Similarity=0.200 Sum_probs=60.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhH----HHHHhCCCcE-E--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKC----EKAKAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~----~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
.++++||+|+ |.+|..+++-+...|+ +++.+.+ +.++. ..++..+... . .|..+ ..++...+.++..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRY 82 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHc
Confidence 3689999998 9999999998888999 6665543 32222 2233343322 2 23331 2333333333322
Q ss_pred CCccEEEeccCC----------hH---------------HHHHHHHHhccCCccEEEeccCC
Q 017052 262 GGADYSFECIGD----------TG---------------MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 262 ~~~d~vid~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+++|++|.+.|. .+ ..+.+.+.+.+. |+++.++...
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 378999999873 11 122334455665 8899887643
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.19 Score=45.15 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=63.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CC----cEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GV----TEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~----~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
.+.++||++|.|+ |..+..+++.....++++++.+++-.+.+++. +. +.+-.. ..+..+.+... .+.+|+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~~-~~~yD~ 139 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAVH-RHSTDV 139 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHhC-CCCCCE
Confidence 4567899999864 77777888776444899999999999988873 32 111111 12333334332 347998
Q ss_pred EE-eccCC---------hHHHHHHHHHhccCCccEEE
Q 017052 267 SF-ECIGD---------TGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 267 vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 293 (378)
|+ |...+ .+.+..+.+.|+++ |.++.
T Consensus 140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 77 54322 36678888999997 99876
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.095 Score=48.95 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+.+|+|+|+|++|..++..+..+|..+++.++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998888888764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.078 Score=47.33 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=48.1
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHH----HHHhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~----~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
++++||+|+ |++|..+++.+...|+ +|+.+. ++.++.+ .++..+... . .|..+ ..++...+.++. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 578999998 9999999999999999 776664 4444432 233345332 2 23331 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 78999988873
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.087 Score=49.22 Aligned_cols=35 Identities=26% Similarity=0.429 Sum_probs=31.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999899999876
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.13 Score=48.93 Aligned_cols=46 Identities=28% Similarity=0.387 Sum_probs=37.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
.|++|.|+|.|.+|+.+++.++..|. +|++.+++....+..+.++.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~ 236 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGL 236 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCc
Confidence 57899999999999999999999999 99999887644444444443
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.065 Score=47.50 Aligned_cols=83 Identities=24% Similarity=0.292 Sum_probs=53.2
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE--E--eCCCC-CCchHHHHHHHH
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--F--LNPND-NNEPVQQVIKRI 259 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~--v--i~~~~-~~~~~~~~i~~~ 259 (378)
+..+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ ++.+... + .+.+. +..++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3557899999988 9999999998888899 899999987664333 3333221 2 23321 122333333333
Q ss_pred hC--CCccEEEeccCC
Q 017052 260 TD--GGADYSFECIGD 273 (378)
Q Consensus 260 ~~--~~~d~vid~~g~ 273 (378)
.. +++|++|.+.|.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 368999987763
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.22 Score=46.53 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=64.3
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC-----------CcEEeCCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-----------VTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g-----------~~~vi~~~~~~~~~~~~i~~~ 259 (378)
....++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++. .+++-.. -.+..+.+..
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv---i~Da~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH---VCDAKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE---ECcHHHHHHh-
Confidence 3455799999875 4667777888766669999999999999988631 1111000 1123333433
Q ss_pred hCCCccEEE-eccCC----------hHHHHHHHHHhccCCccEEEecc
Q 017052 260 TDGGADYSF-ECIGD----------TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 260 ~~~~~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..+.+|+|| |.... .+.+..+.+.|+++ |.++.-..
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 334799877 54221 23567788899997 99877643
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.11 Score=47.11 Aligned_cols=84 Identities=17% Similarity=0.241 Sum_probs=58.0
Q ss_pred HHhhcCC-CCCCeEEEEccCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 185 AWNVADI-SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 185 l~~~~~~-~~g~~VLI~Gag~-vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
+.+..++ -.|++|+|+|+|. +|..++.++...|+ +|+.+.+..+ ++.+.+ .
T Consensus 149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~ 201 (283)
T PRK14192 149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----K 201 (283)
T ss_pred HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----c
Confidence 3344444 5799999999976 99999999999999 8888754211 111112 2
Q ss_pred CccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 263 GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 263 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.+|+|+.++|.+..+. ...++++ ..++++|...
T Consensus 202 ~aDIvI~AtG~~~~v~--~~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 202 QADIIVGAVGKPELIK--KDWIKQG-AVVVDAGFHP 234 (283)
T ss_pred cCCEEEEccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence 6899999998765333 3457775 7777887543
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.07 Score=48.23 Aligned_cols=79 Identities=25% Similarity=0.326 Sum_probs=50.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------H----HHHHhCCCcE-E--eCCCCCCchHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------C----EKAKAFGVTE-F--LNPNDNNEPVQQVIK 257 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-------~----~~l~~~g~~~-v--i~~~~~~~~~~~~i~ 257 (378)
.++++||+|+ |++|..++..+...|+ +|+++.++.++ . +.++..+... . .|..+ ..+..+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 5689999998 9999999998888999 88888876542 1 1223334322 1 34432 233333333
Q ss_pred HHh--CCCccEEEeccCC
Q 017052 258 RIT--DGGADYSFECIGD 273 (378)
Q Consensus 258 ~~~--~~~~d~vid~~g~ 273 (378)
+.. .+.+|++|.+.|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 322 1378999998874
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.049 Score=46.72 Aligned_cols=98 Identities=17% Similarity=0.303 Sum_probs=61.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHh-C
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRIT-D 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~-~ 261 (378)
+.....++.+||-.|+|. |..++.+|+. |. +|++++.+++-.+.+++. +...+. .. ..++ .+.. .
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~-~~--~~d~----~~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH-TA--VVDL----NNLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce-EE--ecCh----hhCCcC
Confidence 344556778999998864 7777788875 77 899999999877666542 222111 10 0111 1111 2
Q ss_pred CCccEEEeccC----C----hHHHHHHHHHhccCCccEEEec
Q 017052 262 GGADYSFECIG----D----TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 ~~~d~vid~~g----~----~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.+|+|+.... . ...+..+.+.|+++ |+++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 37999986533 1 24566778889997 9965543
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.082 Score=47.62 Aligned_cols=77 Identities=21% Similarity=0.256 Sum_probs=49.7
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CCCc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
+++||+|+ |++|..++..+...|+ +|+.++++.++.+.+ +..+... ++ |.. +..++.+.+.... .+++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVR-DYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCC-CHHHHHHHHHHHHHHcCCC
Confidence 36899998 9999999988888899 898888887765432 2333332 22 332 1223333333322 2378
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++|.+.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.081 Score=47.17 Aligned_cols=79 Identities=16% Similarity=0.253 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.+++|||+|+ +++|..++..+...|+ +++.++++.++.+.+ +..+... . .|..+ ..+..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999998888999 788888877665433 2233322 2 23331 233333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998873
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.29 Score=42.11 Aligned_cols=81 Identities=30% Similarity=0.405 Sum_probs=56.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-.|++|+|.|.|.+|..+++.+...|+ +|++.+++.++.+.+.+ +++. .++.+ + +. ...+|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~----~----l~---~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPE----E----IY---SVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcch----h----hc---cccCCEEEec
Confidence 468899999999999999999999999 89999999887766644 4643 22221 1 11 1157888866
Q ss_pred cCChHHHHHHHHHhc
Q 017052 271 IGDTGMITTALQSCC 285 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~ 285 (378)
..+...-...++.++
T Consensus 93 A~~~~I~~~~~~~l~ 107 (200)
T cd01075 93 ALGGVINDDTIPQLK 107 (200)
T ss_pred ccccccCHHHHHHcC
Confidence 554444445556665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.0092 Score=48.72 Aligned_cols=95 Identities=18% Similarity=0.172 Sum_probs=57.0
Q ss_pred EEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC----CCchHHHHHHHHhCCCccEEEeccC
Q 017052 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND----NNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 197 VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~----~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
|+|+|+|++|...+..++..|. .|..+.+++ +.+.+++-|........+ ........ ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999999988888999 899998888 777777655422211100 00000000 112237999999997
Q ss_pred ChHH---HHHHHHHhccCCccEEEecc
Q 017052 273 DTGM---ITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~~---~~~~~~~l~~~~G~~v~~g~ 296 (378)
.... +..+...+.++ ..++.+.+
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeC
Confidence 6432 33333344554 56666644
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.039 Score=51.91 Aligned_cols=75 Identities=15% Similarity=0.241 Sum_probs=48.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC--c-EEe--CCCCCCchHHHHHHHHhCC-Cc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EFL--NPNDNNEPVQQVIKRITDG-GA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~--~-~vi--~~~~~~~~~~~~i~~~~~~-~~ 264 (378)
+|++|||+|+ |.+|..+++.+...|. +|+++++++...... +.++. . ..+ |.. + .+.+.++... ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~--~---~~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIR--D---AAKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCC--C---HHHHHHHHhhcCC
Confidence 5789999988 9999999999999998 898888766543221 22221 1 112 332 1 1223333333 68
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+||.+.+.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999999873
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.16 Score=44.60 Aligned_cols=101 Identities=23% Similarity=0.341 Sum_probs=67.7
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhC----CC-cEEeCCCCCCchHHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF----GV-TEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~----g~-~~vi~~~~~~~~~~~~i~~~ 259 (378)
.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++. +. ..++..+ ...+ .+
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADGL-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--cccC-----CC
Confidence 3667788999999999975 888889998873 23899999999988877664 11 1122111 1110 11
Q ss_pred hCCCccEEEecc-----CC-hHHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSFECI-----GD-TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.+|+|+-.. .. ...+..+.++|+++ |+++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 234789877432 12 34678889999997 9988764
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.23 Score=39.15 Aligned_cols=86 Identities=13% Similarity=0.243 Sum_probs=54.0
Q ss_pred EEEEcc-ChHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHhCCCcEEeCCCCCCchHHHHH--------------
Q 017052 197 VVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTNPEK---CEKAKAFGVTEFLNPNDNNEPVQQVI-------------- 256 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g--~~~vi~v~~~~~~---~~~l~~~g~~~vi~~~~~~~~~~~~i-------------- 256 (378)
|.|.|+ |.+|..++++.+... . +|++.....+- .+.++++.+..+...+ +...+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~---~~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD---EEAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS---HHHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHHhhhcCCCCEEE
Confidence 568899 999999999999886 5 67666554333 2445668888876654 2222222
Q ss_pred ------HHHhC-CCccEEEeccCChHHHHHHHHHhcc
Q 017052 257 ------KRITD-GGADYSFECIGDTGMITTALQSCCD 286 (378)
Q Consensus 257 ------~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~ 286 (378)
.++.. ..+|+|+..+.+-..+.-.+..+..
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~ 113 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA 113 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC
Confidence 22222 3678888877776777777788875
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.12 Score=46.76 Aligned_cols=71 Identities=17% Similarity=0.236 Sum_probs=49.3
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC---CCcEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~---g~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
...+++++|+|+|++|.+++..+...|. +++++.++.++.+.+ +.+ +.......+ + .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-------~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD-------E----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh-------h----hcccCccE
Confidence 3567899999999999999988888898 899999988776544 333 221222111 1 11126899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
||+|++.
T Consensus 182 vInatp~ 188 (270)
T TIGR00507 182 IINATSA 188 (270)
T ss_pred EEECCCC
Confidence 9999875
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.14 Score=45.23 Aligned_cols=76 Identities=16% Similarity=0.233 Sum_probs=48.4
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---CCCcE--Ee--CCCCCCchHHHHHHHHhCCCcc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A---FGVTE--FL--NPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~---~g~~~--vi--~~~~~~~~~~~~i~~~~~~~~d 265 (378)
++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+. . .+... ++ |.. +..+..+.+.+.. ..+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~-~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDIL-DTASHAAFLDSLP-ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCC-ChHHHHHHHHHHh-hcCC
Confidence 57999988 9999999999988999 8999999887654332 1 11112 22 332 1223333333321 2579
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++.+.|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99987663
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.097 Score=46.38 Aligned_cols=79 Identities=18% Similarity=0.283 Sum_probs=49.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~-v~~~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ |.+|+.++..+...|+ +|+. ..++.++.+. ++..+... .+ |.. +..+....+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-DVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence 4679999988 9999999999999999 6655 4666655432 23334322 22 332 12333333433322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998873
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.11 Score=46.31 Aligned_cols=35 Identities=31% Similarity=0.477 Sum_probs=30.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
...+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888654
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.17 Score=44.45 Aligned_cols=101 Identities=21% Similarity=0.278 Sum_probs=59.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHhCCCcEEeCCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKC----EKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~----~~l~~~g~~~vi~~~~~~ 249 (378)
...+|+|.|+|++|..++..+..+|..+++.++.+. .|. +.+++++...-+... .
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~--~ 97 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY--N 97 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe--c
Confidence 357899999999999999999999998888885533 122 223334443222111 1
Q ss_pred chH-HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 250 EPV-QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 250 ~~~-~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..+ .+.+.++. .++|+||+|+..........+.+...+-.++..|.
T Consensus 98 ~~i~~~~~~~~~-~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~ 144 (228)
T cd00757 98 ERLDAENAEELI-AGYDLVLDCTDNFATRYLINDACVKLGKPLVSGAV 144 (228)
T ss_pred ceeCHHHHHHHH-hCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 111 11222222 26899999999865544444444443133555443
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.43 Score=41.58 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=66.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++.+|||+|+|.++.-=+..+...|+ +|+++...- +....+.+.|.-..+.-+ .... .+ .++++||-++
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~r~-~~~~---dl-----~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIKGN-YDKE---FI-----KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEeCC-CChH---Hh-----CCCcEEEECC
Confidence 57899999999999888888888999 788775432 122222223332222111 0111 11 2789999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+.+..-.......... +.++...+.....++-++...-..++++
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~PAiv~rg~l~I 137 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIPYQRSTKNFVF 137 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEeeeEEecCCEEE
Confidence 8866555555556554 7777765444445555554332224444
|
|
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.07 Score=54.75 Aligned_cols=76 Identities=25% Similarity=0.337 Sum_probs=52.9
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhCCCcEEeCCCC-CC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPND-NN 249 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~---------------------~~~~l~~~g~~~vi~~~~-~~ 249 (378)
..+++|+|+|+|+.|+.++..++..|. +|++++..+. ..+.++++|++...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358899999999999999999999999 7888876532 355667788765443321 01
Q ss_pred chHHHHHHHHhCCCccEEEeccCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
..+.+ +. ..+|.||.++|.
T Consensus 404 i~~~~-~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLES-LL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHHH-HH----hcCCEEEEeCCC
Confidence 11211 11 268999998885
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.12 Score=44.94 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=31.2
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999889988876
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.54 Score=44.94 Aligned_cols=78 Identities=19% Similarity=0.207 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE--eC-CCCCCchHHHHHHHHhCC-CccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LN-PNDNNEPVQQVIKRITDG-GADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v--i~-~~~~~~~~~~~i~~~~~~-~~d~v 267 (378)
..++|||+|+ ...|+.+++.++..|. +|+++++++.......+ .++.. +. .+.+...+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4589999998 5699999999999999 89999887654332111 12222 21 222245567777776655 89999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
+-+..
T Consensus 81 IP~~e 85 (389)
T PRK06849 81 IPTCE 85 (389)
T ss_pred EECCh
Confidence 97754
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.1 Score=46.59 Aligned_cols=102 Identities=12% Similarity=0.108 Sum_probs=60.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC--CCcEE-eCCCCCCchHHHHHHHHhCCCccE
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF--GVTEF-LNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~--g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
-..+++|||+|+ |.+|..++..+...|. +|+++.+++++....... ++..+ .|.. +. . +.+.+....++|+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~--d~-~-~~l~~~~~~~~d~ 88 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVT--EG-S-DKLVEAIGDDSDA 88 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCC--CC-H-HHHHHHhhcCCCE
Confidence 345689999998 9999999988888898 899888887765443221 12221 2333 11 1 1222222126899
Q ss_pred EEeccCChH-------------HHHHHHHHhccC-CccEEEeccC
Q 017052 267 SFECIGDTG-------------MITTALQSCCDG-WGLAVTLGVP 297 (378)
Q Consensus 267 vid~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 297 (378)
||.+.|... ....+++.+... .++++.++..
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 998876411 123344444332 2678887654
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.084 Score=42.22 Aligned_cols=98 Identities=21% Similarity=0.290 Sum_probs=56.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHH----HHHhCCC-cEEeCCCCCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKCE----KAKAFGV-TEFLNPNDNN 249 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~~----~l~~~g~-~~vi~~~~~~ 249 (378)
..+|+|.|+|++|..++..+...|..+++.++.+. .|.+ .++++.+ ..+..+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~--- 78 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP--- 78 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence 46899999999999999999999998888887643 1222 2233332 1222121
Q ss_pred chH-HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 250 EPV-QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 250 ~~~-~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+ .+...++. .++|+||+|+.+......+.+.+...+-.++..+
T Consensus 79 ~~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 79 EKIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp SHCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred cccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 111 11222222 2789999999886555555555555413344443
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.13 Score=45.38 Aligned_cols=35 Identities=34% Similarity=0.510 Sum_probs=30.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.+.+|+|+|+|++|..++..+..+|..+++.++.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888754
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.12 Score=46.42 Aligned_cols=79 Identities=27% Similarity=0.387 Sum_probs=51.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~ 262 (378)
.++++||+|+ +++|..++..+...|+ +++.+.+++++.+.+ ++.+... . .|..+ ..+....+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5789999988 9999999988888899 788888887765433 2334322 2 23331 2333333333222 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.093 Score=47.01 Aligned_cols=79 Identities=16% Similarity=0.269 Sum_probs=47.4
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCCh------hhHHHHHhCCC-cEE--eCCCCCCchHHHHHHHHh
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP------EKCEKAKAFGV-TEF--LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~------~~~~~l~~~g~-~~v--i~~~~~~~~~~~~i~~~~ 260 (378)
.|+++||+|+ +++|.+++..+...|+ +|+.+.++. +..+.+++.+. ... .|.. +..+..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQ-DDAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcC-CHHHHHHHHHHHH
Confidence 5789999986 4899999999988999 777664332 22223322221 122 2333 1333443444332
Q ss_pred C--CCccEEEeccCC
Q 017052 261 D--GGADYSFECIGD 273 (378)
Q Consensus 261 ~--~~~d~vid~~g~ 273 (378)
. +++|+++++.|.
T Consensus 83 ~~~g~iD~lv~nag~ 97 (258)
T PRK07370 83 QKWGKLDILVHCLAF 97 (258)
T ss_pred HHcCCCCEEEEcccc
Confidence 2 478999998873
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.093 Score=47.41 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=51.0
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
.+...+++++|+|+|+.+++++..++..|+.+++.+.|+.++.+.+.+ ++. .+. ..+ ....+|+|
T Consensus 117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~----~~~-------~~~---~~~~~dlv 182 (272)
T PRK12550 117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGY----EWR-------PDL---GGIEADIL 182 (272)
T ss_pred cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCC----cch-------hhc---ccccCCEE
Confidence 344556799999999999999999999999789999999988776644 331 110 011 11258999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
++|+.
T Consensus 183 INaTp 187 (272)
T PRK12550 183 VNVTP 187 (272)
T ss_pred EECCc
Confidence 99975
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.074 Score=47.07 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=48.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChh-hHHHH---HhCCCcEE---eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPE-KCEKA---KAFGVTEF---LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~-~~~~l---~~~g~~~v---i~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ |.+|..+++.+...|+ +++... ++.. ..+.+ +..+.... .|..+ ..+..+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 4678999988 9999999999999999 676643 3332 22233 33444332 23331 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 478999999874
|
|
| >COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.22 Score=45.07 Aligned_cols=97 Identities=15% Similarity=0.147 Sum_probs=64.2
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-cEEeCCCC----CCchHHHHHHHHhCCCccEEE-
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TEFLNPND----NNEPVQQVIKRITDGGADYSF- 268 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-~~vi~~~~----~~~~~~~~i~~~~~~~~d~vi- 268 (378)
++|||+|.|. |-.+=.++++...+++++++.+++=.++++++-. .+.-..+. .-.+-.+.+++... .+|+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 6999997643 5556678888888899999999999999988422 11000000 01233344544332 799876
Q ss_pred eccCC---------hHHHHHHHHHhccCCccEEEe
Q 017052 269 ECIGD---------TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 269 d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 294 (378)
|++.. .+..+.+.++|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 66654 35677888999998 888776
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.16 Score=50.25 Aligned_cols=73 Identities=16% Similarity=0.341 Sum_probs=52.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CC-CcE-EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG-VTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g-~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.+.+|+|+|+|.+|.++++.+...|+.+|+++.++.++.+.+.+ ++ ... +..++ +..+.+ ...|+||.
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~----dl~~al-----~~aDVVIs 335 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD----EMLACA-----AEADVVFT 335 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh----hHHHHH-----hcCCEEEE
Confidence 47899999999999999999999998789999999888766544 53 221 11221 222222 26899999
Q ss_pred ccCCh
Q 017052 270 CIGDT 274 (378)
Q Consensus 270 ~~g~~ 274 (378)
|++.+
T Consensus 336 AT~s~ 340 (519)
T PLN00203 336 STSSE 340 (519)
T ss_pred ccCCC
Confidence 98764
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.12 Score=46.69 Aligned_cols=77 Identities=22% Similarity=0.316 Sum_probs=49.1
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh-CCCcc
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT-DGGAD 265 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~-~~~~d 265 (378)
++++||+|+|++|.+++..+. .|+ +|+.+++++++.+.+ +..+... . .|..+ ..+..+.+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 467888899999999998885 788 899998887665433 2233322 2 24431 233333333321 24799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999874
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.12 Score=45.96 Aligned_cols=77 Identities=21% Similarity=0.301 Sum_probs=49.6
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--CCc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
+++||+|+ |.+|..+++.+...|+ +|+.+.+++++.+.+ +..+... . .|..+ ...+.+.+..... +++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 47899998 9999999999989999 899888877654332 2334322 2 23331 2333333433322 368
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.1 Score=49.72 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=31.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999889999886
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.2 Score=47.61 Aligned_cols=46 Identities=26% Similarity=0.255 Sum_probs=37.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
.|++|.|+|.|.+|+.+++.++..|. +|++.+++....+..+.+|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 68899999999999999999999999 89999887544444444543
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.3 Score=37.67 Aligned_cols=74 Identities=27% Similarity=0.408 Sum_probs=53.1
Q ss_pred EEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChH
Q 017052 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (378)
Q Consensus 197 VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 275 (378)
|+|.|.|.+|+.+++.++..+. .+++++.++++.+.+++.|...+. -+ ..-.+.+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd---~~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GD---ATDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S----TTSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-cc---chhhhHHhhcCccccCEEEEccCCHH
Confidence 5788999999999999999776 899999999999999998865433 32 12223344433337888887877643
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.13 Score=45.37 Aligned_cols=79 Identities=23% Similarity=0.376 Sum_probs=47.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~~----~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
.++++||+|+ |.+|..++..+...|+ +|+++.++..+ .+ .++..+... .+ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4578999998 9999999999999999 77666555432 22 122233222 22 3331 2233333333322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|.++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.09 Score=46.97 Aligned_cols=75 Identities=19% Similarity=0.242 Sum_probs=47.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
+|+++||+|+ |++|..+++.+...|+ +|+.+.++.++.. .-.... ..|..+ ..+....+.++. .+++|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999998 9999999999988999 8999988765321 111111 223331 222322232222 23789999
Q ss_pred eccC
Q 017052 269 ECIG 272 (378)
Q Consensus 269 d~~g 272 (378)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.2 Score=44.29 Aligned_cols=104 Identities=18% Similarity=0.176 Sum_probs=65.6
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh-
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~- 260 (378)
...+..+.++||-+|.| .|..++.+|+.++ ..++++++.+++..+.+++ .|....+... ..+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHh
Confidence 34566778899998873 3666667777653 3389999999988777654 4543322211 123334444432
Q ss_pred ---CCCccEEEeccC---ChHHHHHHHHHhccCCccEEEe
Q 017052 261 ---DGGADYSFECIG---DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ---~~~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.||+||--.. -...++.++++++++ |.++.-
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 237999884322 135677889999997 877654
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.19 Score=43.76 Aligned_cols=95 Identities=19% Similarity=0.249 Sum_probs=62.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
-+|.+||=+|+|+ |+++..+|+ +|+ .|++++.+++..+.++...... .++|. ....+.+... ++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~---~~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYR---QATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccch---hhhHHHHHhc-CCCccEEEE
Confidence 4889999999843 555555554 567 9999999999999888533322 24564 2222333321 148999874
Q ss_pred -----ccCCh-HHHHHHHHHhccCCccEEEe
Q 017052 270 -----CIGDT-GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 270 -----~~g~~-~~~~~~~~~l~~~~G~~v~~ 294 (378)
-+..+ ..+..+.+.++|+ |.++..
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 33333 3566788899997 887765
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.17 Score=48.48 Aligned_cols=81 Identities=20% Similarity=0.331 Sum_probs=51.1
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHhC-CCcEE-eCCCCCCchHHHHHHHH
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-------KAKAF-GVTEF-LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~-------~l~~~-g~~~v-i~~~~~~~~~~~~i~~~ 259 (378)
.-..+.+|||+|+ |.+|..+++.+...|. +|+++.++..+.+ ..+.. +...+ .|..+ ...+.+.+...
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHh
Confidence 3456789999998 9999999999988898 8999988765421 11222 22222 23331 22333333321
Q ss_pred hCCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGD 273 (378)
Q Consensus 260 ~~~~~d~vid~~g~ 273 (378)
..++|+||+|.+.
T Consensus 134 -~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 -GDPVDVVVSCLAS 146 (390)
T ss_pred -CCCCcEEEECCcc
Confidence 1168999998864
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.14 Score=46.19 Aligned_cols=79 Identities=20% Similarity=0.267 Sum_probs=50.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+.+++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+ +..+... . .|.. +..++.+.+.+.. .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVT-DPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHhcC
Confidence 4568999998 9999999998888899 888888876654332 2234322 2 2333 1233333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 78999998874
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.14 Score=47.19 Aligned_cols=37 Identities=24% Similarity=0.310 Sum_probs=32.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.++
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~ 171 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKS 171 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCC
Confidence 67899999999999999999999999 89999876543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.12 Score=46.27 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=49.1
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTN---PEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~---~~~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ +++|+++++.+...|+ +|+.+.+. +++.+.+ ++++.... .|.. +..+..+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVA-SDEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCC-CHHHHHHHHHHHHHHh
Confidence 5789999984 5899999998888999 77776543 2333322 33443322 2333 13344444444332
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998763
|
|
| >PLN02823 spermine synthase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.19 Score=46.75 Aligned_cols=99 Identities=14% Similarity=0.180 Sum_probs=60.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-cE-EeCCCC---CCchHHHHHHHHhCCCccEE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TE-FLNPND---NNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-~~-vi~~~~---~~~~~~~~i~~~~~~~~d~v 267 (378)
..++|||+|+|. |..+..+++..+..++++++.+++-.++++++-. .. ..+... ...+-...+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998753 5556677787776689999999999999987432 10 000000 01222333432 33489987
Q ss_pred E-eccC----C-------hHHHH-HHHHHhccCCccEEEe
Q 017052 268 F-ECIG----D-------TGMIT-TALQSCCDGWGLAVTL 294 (378)
Q Consensus 268 i-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~ 294 (378)
| |... + .+.++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 7 6432 1 12455 677889997 987753
|
|
| >PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.051 Score=46.84 Aligned_cols=101 Identities=20% Similarity=0.307 Sum_probs=65.0
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhC--
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~-- 261 (378)
+....++||-+|.+ +|..++.+|+.+ +. +++.++.++++.+.+++ .|....+... ..+..+.+.++..
T Consensus 42 ~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~--~gda~~~l~~l~~~~ 117 (205)
T PF01596_consen 42 RLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVI--EGDALEVLPELANDG 117 (205)
T ss_dssp HHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEE--ES-HHHHHHHHHHTT
T ss_pred HhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEE--EeccHhhHHHHHhcc
Confidence 34456799999874 488888899876 45 99999999998887754 4543322211 2234444444432
Q ss_pred --CCccEEE-eccCC--hHHHHHHHHHhccCCccEEEec
Q 017052 262 --GGADYSF-ECIGD--TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 --~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.||+|| |+--. ...+..++++++++ |.++.=.
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 3699888 55432 24577888999985 7666543
|
The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A .... |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.13 Score=49.26 Aligned_cols=74 Identities=22% Similarity=0.348 Sum_probs=48.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC-cEEe--CCCCCCchHHHHHHHHhCCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV-TEFL--NPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~-~~vi--~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
.+++++|+|+ |++|.++++.+...|+ +|+++++++++.+.. +..+. ...+ |.. +. +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--QE---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--CH---HHHHHHh-CCCCEE
Confidence 4789999998 9999999998888999 899888887665432 11111 1122 332 21 2233322 378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|.+.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988763
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.17 Score=47.31 Aligned_cols=37 Identities=35% Similarity=0.524 Sum_probs=33.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 58899999999999999999999999 89999886543
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.19 Score=44.10 Aligned_cols=102 Identities=21% Similarity=0.257 Sum_probs=70.2
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
.+.++.+|++|+=.|.| .|-+++-||+..|. .+|+..+..++..+.+++ +|....+... ..+ +++...
T Consensus 88 ~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~D----v~~~~~ 160 (256)
T COG2519 88 ARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGD----VREGID 160 (256)
T ss_pred HHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--ecc----cccccc
Confidence 57899999999888765 37778888887764 489999999988777654 4443322111 111 222222
Q ss_pred C-CccEEE-eccCChHHHHHHHHHhccCCccEEEecc
Q 017052 262 G-GADYSF-ECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~-~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+ .+|.|| |--..-..++.+...|+++ |.++.+.-
T Consensus 161 ~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 161 EEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 2 788655 6655557889999999997 99988843
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.11 Score=46.08 Aligned_cols=74 Identities=27% Similarity=0.321 Sum_probs=48.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-E--eCCCCCCchHHHHHHHHhC--CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d~ 266 (378)
+++++||+|+ |.+|..++..+...|+ +|+.++++. ++..+... . .|.. +..++.+.+.+... +++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVS-DAAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCC-CHHHHHHHHHHHHHHcCCCCE
Confidence 5689999998 8999999999988999 899988875 22222211 2 2332 12334443433322 36899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998874
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.25 Score=42.93 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=62.7
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeC-------CCCCCch-HHHHHHHHh-
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLN-------PNDNNEP-VQQVIKRIT- 260 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~-------~~~~~~~-~~~~i~~~~- 260 (378)
..++.+||+.|+| .|.-++.+|. .|. .|++++.++...+.+. +.+...... +....-. ....+.++.
T Consensus 32 ~~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 3577899999987 3888888885 698 8999999999888752 233211000 0000000 000011111
Q ss_pred --CCCccEEEeccCC--------hHHHHHHHHHhccCCccEEEeccC
Q 017052 261 --DGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 261 --~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.+.+|.|+|+..- ...+..+.++|+++ |+++.++..
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~ 154 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD 154 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence 1268999997531 24577888999997 987766543
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.93 E-value=0.15 Score=45.55 Aligned_cols=78 Identities=24% Similarity=0.307 Sum_probs=48.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-Hh----CCCc-EE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KA----FGVT-EF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l-~~----~g~~-~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
+++++||+|+ +++|.+++..+...|+ +|+.+.+ +.++.+.+ +. .+.. .. .|..+ ..+..+.+.++.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5789999998 9999999999999999 7776643 44443322 11 2332 12 24431 233443444332
Q ss_pred CCCccEEEeccC
Q 017052 261 DGGADYSFECIG 272 (378)
Q Consensus 261 ~~~~d~vid~~g 272 (378)
.+.+|+++.+.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247899998875
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.87 Score=33.67 Aligned_cols=75 Identities=24% Similarity=0.398 Sum_probs=49.5
Q ss_pred eEEEEccChHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHH-HhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 196 TVVIFGLGTVGLSVAQGAKARG---ASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g---~~~vi-~v~~~~~~~~~l-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+|.|+|+|.+|.+++.-+...| . +++ +..+++++.+.+ ++++..... .+..+.+. ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc-----cCCEEEEE
Confidence 4678899999999999998888 6 777 548999887766 556643332 12333343 36999999
Q ss_pred cCChHHHHHHHHH
Q 017052 271 IGDTGMITTALQS 283 (378)
Q Consensus 271 ~g~~~~~~~~~~~ 283 (378)
+.. ..+...+..
T Consensus 69 v~p-~~~~~v~~~ 80 (96)
T PF03807_consen 69 VKP-QQLPEVLSE 80 (96)
T ss_dssp S-G-GGHHHHHHH
T ss_pred ECH-HHHHHHHHH
Confidence 976 344444443
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.23 Score=43.59 Aligned_cols=74 Identities=23% Similarity=0.377 Sum_probs=54.8
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh--CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA--FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~--~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+++|.|+|-+|..+++.+...|. .|+.++.++++.+...+ +....+. .+ ..-.+.++++--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~-gd---~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVI-GD---ATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEE-ec---CCCHHHHHhcCCCcCCEEEEeeCC
Confidence 68899999999999999999999 89999999999777433 5554443 22 222345555533489999988887
Q ss_pred h
Q 017052 274 T 274 (378)
Q Consensus 274 ~ 274 (378)
.
T Consensus 77 d 77 (225)
T COG0569 77 D 77 (225)
T ss_pred C
Confidence 3
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.29 Score=41.98 Aligned_cols=100 Identities=11% Similarity=0.140 Sum_probs=59.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-------------------h----HHHHHhCCCcEEeCCCCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------K----CEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-------------------~----~~~l~~~g~~~vi~~~~~~ 249 (378)
...+|+|.|+|++|.-++..+..+|..+++.++.+.- | .+.+++++.+..+...+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 4578999999999999999999999988888865421 1 22345565554333211
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.+...++. .++|+|++|..........-+.+.+.+-.++..+
T Consensus 98 ~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~~ip~i~~~ 142 (197)
T cd01492 98 DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKLGVKFYATG 142 (197)
T ss_pred cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 11111111111 2789999998775554444455554313344443
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.23 Score=44.87 Aligned_cols=80 Identities=20% Similarity=0.268 Sum_probs=56.1
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----hCCCcE---EeCCCCCCchHHHHHHHHhCC
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-----AFGVTE---FLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-----~~g~~~---vi~~~~~~~~~~~~i~~~~~~ 262 (378)
+.|++.+|+|+ .++|.+-+.=+...|. +|+-+.|+.+|++..+ +.++.. ++|+.+.+. ..+.+++...+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLAG 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhcC
Confidence 34788999999 7899876644444999 7999999999987664 355322 457764444 34556655555
Q ss_pred -CccEEEeccCC
Q 017052 263 -GADYSFECIGD 273 (378)
Q Consensus 263 -~~d~vid~~g~ 273 (378)
.+-+.++++|-
T Consensus 125 ~~VgILVNNvG~ 136 (312)
T KOG1014|consen 125 LDVGILVNNVGM 136 (312)
T ss_pred CceEEEEecccc
Confidence 77889999984
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.19 Score=41.59 Aligned_cols=89 Identities=20% Similarity=0.308 Sum_probs=56.0
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+|-++|.|.+|...++-+...|. +|++.++++++.+.+.+.|+...- +..+.+. ..|+||-|+..+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~~-------s~~e~~~-----~~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVAD-------SPAEAAE-----QADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEES-------SHHHHHH-----HBSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhhh-------hhhhHhh-----cccceEeecccc
Confidence 468899999999999999999999 899999999999988887743321 2222222 347888777765
Q ss_pred HHHHHHHH------HhccCCccEEEeccC
Q 017052 275 GMITTALQ------SCCDGWGLAVTLGVP 297 (378)
Q Consensus 275 ~~~~~~~~------~l~~~~G~~v~~g~~ 297 (378)
...+..+. .+.++ ..+++++..
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 44444332 34443 455555443
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.18 Score=45.11 Aligned_cols=80 Identities=20% Similarity=0.150 Sum_probs=49.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHhCCCcE-E--eCCCCCCchHHHHHHHHh--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~----~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.+++++||+|+ |++|..+++.+...|+ +++.+.++. +..+ .++..+... . .|..+ ..+..+.+....
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~ 82 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKE 82 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHH
Confidence 36789999988 9999999999999999 677665643 3222 223334322 2 24431 233333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|+++.+.|.
T Consensus 83 ~g~id~lv~~ag~ 95 (261)
T PRK08936 83 FGTLDVMINNAGI 95 (261)
T ss_pred cCCCCEEEECCCC
Confidence 2378999988874
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.15 Score=46.98 Aligned_cols=95 Identities=11% Similarity=0.073 Sum_probs=63.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHH-HhCCCc--EEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKA-KAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l-~~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
...++++|+|+|..|.+.+..+.. .+.+++.+..+++++.+.+ +++... .+. . .+..+.+. +.|+|
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av~-----~aDiV 192 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIPE-----AVDLV 192 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHhh-----cCCEE
Confidence 466789999999999999988864 6777899999998876644 334311 111 1 12333332 68999
Q ss_pred EeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 268 FECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 268 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.|+.++.-+-.. .++++ -++..+|....
T Consensus 193 itaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p 221 (304)
T PRK07340 193 VTATTSRTPVYPE--AARAG-RLVVAVGAFTP 221 (304)
T ss_pred EEccCCCCceeCc--cCCCC-CEEEecCCCCC
Confidence 9998875443333 26775 77888886654
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.14 Score=45.02 Aligned_cols=70 Identities=17% Similarity=0.314 Sum_probs=49.4
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
|+|+|+ |.+|..+++.+...+. +|.++.|+.. ....++..|+..+ ..+ .+-.+.+.+... ++|.||-+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d---~~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EAD---YDDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES----TT-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecc---cCCHHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999999888 8988888764 4566778888654 222 111223333222 7999998888
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.15 Score=45.30 Aligned_cols=77 Identities=19% Similarity=0.278 Sum_probs=47.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-hH-H---HHHhCCCc-EE--eCCCCCCchHHHHHHHHhC--CC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KC-E---KAKAFGVT-EF--LNPNDNNEPVQQVIKRITD--GG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-~~-~---~l~~~g~~-~v--i~~~~~~~~~~~~i~~~~~--~~ 263 (378)
+++||+|+ |.+|..++..+...|+ +|+.++++.. +. + .++..+.. .+ .|..+ ..++.+.+.+... ++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57999998 9999999999988999 8888876532 21 2 22223322 12 23331 2333333333322 36
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999998864
|
|
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.37 Score=43.47 Aligned_cols=130 Identities=17% Similarity=0.132 Sum_probs=85.9
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC---------CCchHHHHHHHH
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND---------NNEPVQQVIKRI 259 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~---------~~~~~~~~i~~~ 259 (378)
++..++.++|+.|+|..|+.++..++..|+ .|...+-.+.+.+..+++|+.-.-..++ -..+|...-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 344567789999999999999999999999 8999988999988888888754321111 122343333333
Q ss_pred hC---CCccEEEeccCC-----h-HHHHHHHHHhccCCccEEEeccCCCCCeeecc-ccc--cccccEEEEeee
Q 017052 260 TD---GGADYSFECIGD-----T-GMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-YGL--FLSGRTLKGSLF 321 (378)
Q Consensus 260 ~~---~~~d~vid~~g~-----~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~--~~~~~~i~g~~~ 321 (378)
.. .++|+||-+.=- | -...+....|+++ +.+|++....++ +.... +.. ..++.+|.|...
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GG-Nce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGG-NCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCC-CcccccCCeEEEeCCeEEEeecC
Confidence 22 289999976522 1 2345788899997 888988654442 22211 111 134888887743
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.08 Score=47.51 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=49.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+. ..... ..|..+ ..++.+.+.++. .+++|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999988 9999999999999999 88888777654321 11111 123331 233444444332 23789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.15 Score=42.74 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=29.2
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+|+|+|+|++|..+++.+...|..+++.++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999999999997888887765
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.16 Score=47.02 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=32.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
.|++|||+|+ |.+|..+++.+...|. +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4789999998 9999999998888898 8887777765433
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.24 Score=45.14 Aligned_cols=94 Identities=19% Similarity=0.241 Sum_probs=65.3
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHhCCCcEEeCCCCCC
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
.+||+....+. |++..++ -.|++|+|+|- +.+|.-++.++...|+ .|++.. ++.
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 45655444444 3355555 47999999995 9999999999999999 888883 332
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ ..|+|+-++|.+..+...+ ++++ ..++++|...
T Consensus 194 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 -DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred -CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 1111222 4799999999877665544 7775 7888887643
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.18 Score=46.24 Aligned_cols=73 Identities=22% Similarity=0.379 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhH---HHHHhCC-CcE---Ee--CCCCCCchHHHHHHHHhCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC---EKAKAFG-VTE---FL--NPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~---~~l~~~g-~~~---vi--~~~~~~~~~~~~i~~~~~~ 262 (378)
.+..|+|+|| |-+|..++..+...|+ +|.++.|+++.. +.++++. +.. ++ |.. +...|.+.+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~-d~~sf~~ai~----- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLL-DEGSFDKAID----- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEecccc-ccchHHHHHh-----
Confidence 6789999999 8899999999999999 899999988763 4577764 221 22 221 1334544443
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
|.|.||.+..
T Consensus 78 gcdgVfH~As 87 (327)
T KOG1502|consen 78 GCDGVFHTAS 87 (327)
T ss_pred CCCEEEEeCc
Confidence 6888887664
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.2 Score=46.12 Aligned_cols=79 Identities=19% Similarity=0.304 Sum_probs=48.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhH----HHHHhCCCcEE-e--CCCCCCchHHHHHHHHh-CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKC----EKAKAFGVTEF-L--NPNDNNEPVQQVIKRIT-DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~----~~l~~~g~~~v-i--~~~~~~~~~~~~i~~~~-~~ 262 (378)
.|+++||+|+ +++|..+++.+...|+ +|+.++++. ++. +.++..|.... + |..+ .....+.+.... .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 5789999988 9999999998888999 788877642 222 22333443322 2 3321 122222222211 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.28 Score=42.16 Aligned_cols=35 Identities=37% Similarity=0.522 Sum_probs=31.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
...+|+|.|+|++|..+++.+...|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999788888877
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.22 Score=43.95 Aligned_cols=78 Identities=14% Similarity=0.155 Sum_probs=48.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH----HhCCC--cEE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKA----KAFGV--TEF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l----~~~g~--~~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |.+|..+++.+...|+ +|++++++. ++.+.+ +.... ... .|..+ ...+...+....
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999998 9999999998888899 898888753 333322 22211 112 23331 223333333321
Q ss_pred CCCccEEEeccC
Q 017052 261 DGGADYSFECIG 272 (378)
Q Consensus 261 ~~~~d~vid~~g 272 (378)
.+++|+||.+.|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 236899999987
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.2 Score=44.15 Aligned_cols=78 Identities=17% Similarity=0.295 Sum_probs=46.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhCCCc-EEe--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVT-EFL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l----~~~g~~-~vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
+.++|||+|+ |.+|..+++.+...|. +++.+.+ +.+..+.+ +..+.. .++ |.. +..++.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVT-DKAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcC-CHHHHHHHHHHHHHHc
Confidence 3578999998 9999999999999999 6655444 33333322 223322 122 332 12333333333322
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37899999887
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.22 Score=45.26 Aligned_cols=97 Identities=16% Similarity=0.147 Sum_probs=64.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhCC-----CcEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFG-----VTEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~g-----~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
+.++|+-+|.|..++.++.+++.+. ..+++.++.+++..+.+++.- ....+.+. ..+..+... ..++||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~--~~Da~~~~~--~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFH--TADVMDVTE--SLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEE--ECchhhccc--ccCCcCE
Confidence 7799999999999998888887553 238999999999988887643 11212221 111111110 1237999
Q ss_pred EEecc-------CChHHHHHHHHHhccCCccEEEe
Q 017052 267 SFECI-------GDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 267 vid~~-------g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
||-.+ .-...+....+.|+++ |.++.=
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 88554 2235678889999996 877654
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.21 Score=46.22 Aligned_cols=79 Identities=24% Similarity=0.288 Sum_probs=50.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HhCCC---c-EE--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l-~~~g~---~-~v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ +++|.++++.+...| + +|+.+.++.++.+.+ ++++. . .. .|..+ ..+..+.+.++. .
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 3678999998 899999998888889 7 888888887765433 33321 1 12 24431 223333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 378999988763
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.22 Score=47.17 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=31.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999999889888776
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.2 Score=44.15 Aligned_cols=78 Identities=22% Similarity=0.378 Sum_probs=48.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----hCCCcE-Ee--CCCCCCchHHHHHHHHhC--C
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~l~----~~g~~~-vi--~~~~~~~~~~~~i~~~~~--~ 262 (378)
++++||+|+ |.+|..++..+...|+ +++.+ +++.++.+.+. ..+... ++ |..+ ..++.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 578999988 9999999988888899 78887 88776654332 222212 22 3321 2233333333222 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 68999988764
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.15 Score=52.46 Aligned_cols=79 Identities=25% Similarity=0.376 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE----EeCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE----FLNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~----vi~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+... ..|..+ ..++.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4789999988 9999999999988999 89999898776554321 23211 223331 233333444332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999884
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.3 Score=44.34 Aligned_cols=66 Identities=21% Similarity=0.375 Sum_probs=48.3
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+|.|+|.|.+|..++..++..|. +|+++++++++.+.+.+.|...... .+. +.+ ...|+||-|+..
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~-----~~~-~~~-----~~aDlVilavp~ 67 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS-----TDL-SLL-----KDCDLVILALPI 67 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc-----CCH-hHh-----cCCCEEEEcCCH
Confidence 58899999999999998888898 8999999999988888776421111 111 111 257888888775
|
|
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.17 Score=46.64 Aligned_cols=97 Identities=11% Similarity=0.055 Sum_probs=57.7
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CCcEEeCCCCCCchHHH-HHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQ-VIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~~~vi~~~~~~~~~~~-~i~~~~~~~~d~vid~~g 272 (378)
.+|+|+|+|++|......+...|. .|+.++++.++.+.+++- |.. +..... ...+.. .......+.+|+||-|+-
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECC
Confidence 369999999999988888778898 788898988777777653 331 211110 000000 000001137899999987
Q ss_pred ChH---HHHHHHHHhccCCccEEEec
Q 017052 273 DTG---MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~~---~~~~~~~~l~~~~G~~v~~g 295 (378)
+.+ .+..+...+.++ ..++.+-
T Consensus 80 ~~~~~~al~~l~~~l~~~-t~vv~lQ 104 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPG-AELLLLQ 104 (305)
T ss_pred HHhHHHHHHHHHhhCCCC-CEEEEEe
Confidence 643 233344445665 6666553
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.16 Score=46.14 Aligned_cols=74 Identities=20% Similarity=0.262 Sum_probs=50.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
..+++|||+|+|++|.+++..+...|+.+|+++.++.++.+.+.+ ++....+..+ . +..+.+ ..+|+|++|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~--~-~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD--L-ELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec--c-cchhcc-----ccCCEEEEC
Confidence 467899999999999999999999996699999999888765543 4321101111 0 010111 268999999
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
+..
T Consensus 193 Tp~ 195 (278)
T PRK00258 193 TSA 195 (278)
T ss_pred CcC
Confidence 865
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.24 Score=46.46 Aligned_cols=97 Identities=20% Similarity=0.316 Sum_probs=58.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-----cEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-----TEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-----~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
-.|++|.|+|.|.+|+.+++.++.+|+ +|++.+++..+... ..++. ...........++.+.+. ..|+
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDi 229 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccCcccCHHHHHh-----hCCE
Confidence 358899999999999999999999999 99999876332211 11100 000000000123333333 3688
Q ss_pred EEeccCChH-----HHHHHHHHhccCCccEEEecc
Q 017052 267 SFECIGDTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 267 vid~~g~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
|+-+...+. .-...+..|+++ ..+|+++-
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 887765321 123567777775 77777753
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.22 Score=44.05 Aligned_cols=79 Identities=15% Similarity=0.239 Sum_probs=47.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
+++++||+|+ |.+|..++..+...|+ +++++.+ ++++.+. ++..+... .+ |.. +...+.+.+.+...
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVS-KVEDANRLVEEAVNHF 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHc
Confidence 4789999988 9999999998888899 6766543 4443322 22333322 22 332 12333333443322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+.+|++|.+.|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.3 Score=46.04 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=31.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+.+|||+|+|++|..+++.+..+|..+++.++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457899999999999999999999998898887754
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.8 Score=41.59 Aligned_cols=107 Identities=17% Similarity=0.109 Sum_probs=72.1
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC-CcE----EeCCCCCCch---HHHHHHHHhCC
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-VTE----FLNPNDNNEP---VQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g-~~~----vi~~~~~~~~---~~~~i~~~~~~ 262 (378)
-+++-|+|+|+ ++.|..++.-+...|. .|++..-+++..+.++..- .++ ..|..+ +++ ..+.+++..+.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~-~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTK-PESVKEAAQWVKKHLGE 104 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCC-HHHHHHHHHHHHHhccc
Confidence 35677999999 9999999999999999 8888888888777775422 211 334432 222 33344454444
Q ss_pred -CccEEEeccCCh--------------------------HHHHHHHHHhccCCccEEEeccCCCC
Q 017052 263 -GADYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 263 -~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
+.=-++++.|-. ......+.++++..||+|.++...+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 667788888721 23344566777766999999877653
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.47 Score=43.67 Aligned_cols=37 Identities=27% Similarity=0.357 Sum_probs=30.0
Q ss_pred CCCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 192 SKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 192 ~~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+. .++.++
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~ 46 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPA 46 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcch
Confidence 36899999988 7899999999999999 7777 444443
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.21 Score=44.55 Aligned_cols=79 Identities=16% Similarity=0.199 Sum_probs=48.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-H---hCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-K---AFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l-~---~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |.+|..+++.+...|+ +++.+.+ +.++.+.+ + ..+... .+ |..+ ..++.+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999998 9999999998888998 6766544 44443322 2 223322 22 3331 233333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 478999999873
|
|
| >PLN02589 caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.32 Score=43.20 Aligned_cols=101 Identities=20% Similarity=0.285 Sum_probs=65.3
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh-
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~- 260 (378)
..+...-++||-+|.+ +|..++.+|+.+ +. +++.++.+++..+.+++ .|...-+... ..+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~--~G~a~e~L~~l~~ 149 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFR--EGPALPVLDQMIE 149 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eccHHHHHHHHHh
Confidence 3445566789888873 577888888876 44 89999999988776644 5643333222 233444555543
Q ss_pred ----CCCccEEE-eccCC--hHHHHHHHHHhccCCccEEE
Q 017052 261 ----DGGADYSF-ECIGD--TGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 261 ----~~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~ 293 (378)
.+.||+|| |+--. ...++.++++++++ |.++.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 24799988 44322 34577888999986 76654
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.31 Score=44.41 Aligned_cols=94 Identities=18% Similarity=0.248 Sum_probs=66.0
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+....+. |.+..++ -.|++|.|+|. +.+|.-++.++...|+ .|++..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 45665444443 3466665 47999999998 5999999999999999 8888854322
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+..+.++ ..|+|+-++|.+..+...+ ++++ ..++++|..
T Consensus 195 ~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 1222222 4799999999876665554 7776 788888754
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.19 Score=44.98 Aligned_cols=79 Identities=22% Similarity=0.323 Sum_probs=49.3
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHH-HHHhCCCc-E--EeCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP--EKCE-KAKAFGVT-E--FLNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~--~~~~-~l~~~g~~-~--vi~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ +++|.++++.+...|+ +|+.++++. +..+ ..++++.. . ..|..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 5789999985 6899999998888999 888887653 3223 33334431 1 223331 233333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999998864
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.38 Score=37.82 Aligned_cols=92 Identities=18% Similarity=0.360 Sum_probs=49.6
Q ss_pred eEEEEcc-ChHHHHHHHHHHH-cCCCeEEE-EcCChh---hHHHHHhCCCc--EEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKA-RGASRIIG-VDTNPE---KCEKAKAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~-~g~~~vi~-v~~~~~---~~~~l~~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
+|.|+|+ |-+|+.+++.+.. -+. ++.+ ++++++ ..+.-+-.|.. .+..+ .++ .++.. .+|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~l----~~~~~-~~DVv 71 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DDL----EELLE-EADVV 71 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-H----HHHTT-H-SEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCcccccc----hhH----HHhcc-cCCEE
Confidence 6899999 9999999999988 577 5544 444441 11111111111 11111 122 22222 27999
Q ss_pred EeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 268 FECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 268 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
||++. ++.....++.+.+. |.-+.+|.+.-
T Consensus 72 IDfT~-p~~~~~~~~~~~~~-g~~~ViGTTG~ 101 (124)
T PF01113_consen 72 IDFTN-PDAVYDNLEYALKH-GVPLVIGTTGF 101 (124)
T ss_dssp EEES--HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred EEcCC-hHHhHHHHHHHHhC-CCCEEEECCCC
Confidence 99984 46666666666554 77777776553
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.45 Score=44.86 Aligned_cols=97 Identities=15% Similarity=0.241 Sum_probs=62.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEc--CChhh-HHHHHhCCCcEEeCCCCC-CchH--------------H
Q 017052 195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVD--TNPEK-CEKAKAFGVTEFLNPNDN-NEPV--------------Q 253 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~--~~~~~-~~~l~~~g~~~vi~~~~~-~~~~--------------~ 253 (378)
++|.|+|+ |.+|..+++..+.. .. +|+++. ++.++ .+.++++++..+...++. ...+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57899997 99999999988765 45 777774 34433 345667888876654310 0011 1
Q ss_pred HHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEE
Q 017052 254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 254 ~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~ 293 (378)
+.+.++... .+|+|+.+++|...+...+.+++.+ -++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 122233333 6899999998876777888888763 44443
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.45 E-value=0.21 Score=47.13 Aligned_cols=80 Identities=26% Similarity=0.319 Sum_probs=48.7
Q ss_pred CCCCeEEEEcc-ChHHHH--HHHHHHHcCCCeEEEEcCCh---h-------------hHHHHHhCCCcE-Ee--CCCCCC
Q 017052 192 SKGSTVVIFGL-GTVGLS--VAQGAKARGASRIIGVDTNP---E-------------KCEKAKAFGVTE-FL--NPNDNN 249 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~--aiqla~~~g~~~vi~v~~~~---~-------------~~~~l~~~g~~~-vi--~~~~~~ 249 (378)
..++++||+|+ +++|++ .++.+ ..|+ .++++.... + -.+.+++.|... .+ |.. ++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVs-s~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAF-SD 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCC-CH
Confidence 45689999988 899999 45556 8899 777776322 1 123455666543 23 332 12
Q ss_pred chHHHHHHHHhC--CCccEEEeccCCh
Q 017052 250 EPVQQVIKRITD--GGADYSFECIGDT 274 (378)
Q Consensus 250 ~~~~~~i~~~~~--~~~d~vid~~g~~ 274 (378)
+...+.+..+.. |++|+++++++.+
T Consensus 116 E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 333333333322 4799999998864
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.5 Score=43.18 Aligned_cols=43 Identities=23% Similarity=0.345 Sum_probs=37.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
+|.|+|.|.+|..++..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 47788999999999888888898 89999999999988887765
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.099 Score=45.75 Aligned_cols=72 Identities=13% Similarity=0.233 Sum_probs=47.9
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
|||+|+ |-+|..++..+...|. .|+++.+++........ .+...+ .+.. +...+.+.+... .+|.||.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~-~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLT-DKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETT-SHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeecc-cccccccccccc---CceEEEEeecc
Confidence 789998 9999999999999999 78888777766654433 333222 2332 122233333322 78999999885
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.23 Score=47.10 Aligned_cols=45 Identities=18% Similarity=0.172 Sum_probs=35.9
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
...+++|||+|+ |.+|..++..+...|+ +|+++.++.++.+.++.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 355789999988 9999999999999999 88887777665544443
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.65 Score=41.53 Aligned_cols=96 Identities=19% Similarity=0.214 Sum_probs=66.2
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh-CCC
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGG 263 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~-~~~ 263 (378)
.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+. . +. .++. .+.
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-~-----d~----~~~~~~~~ 89 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-G-----DV----RDWKPKPD 89 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-c-----Ch----hhCCCCCC
Confidence 3556677889999998864 66777777765 56 899999999998888876543322 1 11 1111 237
Q ss_pred ccEEEeccC-----C-hHHHHHHHHHhccCCccEEEe
Q 017052 264 ADYSFECIG-----D-TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 264 ~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 294 (378)
||+|+-... . ...+..+.+.|+++ |+++..
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999886432 1 34577888899997 998764
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.26 Score=43.33 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=47.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH-HHh---CCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK-AKA---FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~-l~~---~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |.+|..++..+...|+ +++++.+ +.++.+. ..+ .+... . .|..+ ..++.+.+.++. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 47899988 9999999999999999 7877766 4443332 222 22211 2 23331 233333343332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+||.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.21 Score=42.70 Aligned_cols=98 Identities=12% Similarity=0.190 Sum_probs=58.3
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
+.....++.+||-+|+| .|..++.+|+ .|. +|++++.++.-.+.+++. +... ... ..+... ..+ .+
T Consensus 24 ~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v--~~~--~~d~~~--~~~-~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPL--RTD--AYDINA--AAL-NE 93 (195)
T ss_pred HHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCc--eeE--eccchh--ccc-cC
Confidence 34445556789999875 3666666666 477 899999999877766442 3221 110 001100 011 23
Q ss_pred CccEEEeccC-----C---hHHHHHHHHHhccCCccEEEec
Q 017052 263 GADYSFECIG-----D---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 263 ~~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+|+|+...- . ...+..+.+.|+++ |+++.+.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 6899875421 1 24667788889997 9965553
|
Part of a tellurite-reducing operon tehA and tehB |
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.43 Score=34.76 Aligned_cols=35 Identities=34% Similarity=0.569 Sum_probs=29.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
..+++++|.|+|.+|..+++.+...+..++...++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 46789999999999999999999886547777755
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PRK10637 cysG siroheme synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.19 Score=49.12 Aligned_cols=113 Identities=10% Similarity=0.009 Sum_probs=69.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.|++|||+|+|.++.-=++.+...|+ +|+++...- +....+.+-|.-..+.-+ ... +.+ .++++||-++
T Consensus 11 ~~~~vlvvGgG~vA~rk~~~ll~~ga-~v~visp~~~~~~~~l~~~~~i~~~~~~-~~~---~dl-----~~~~lv~~at 80 (457)
T PRK10637 11 RDRDCLLVGGGDVAERKARLLLDAGA-RLTVNALAFIPQFTAWADAGMLTLVEGP-FDE---SLL-----DTCWLAIAAT 80 (457)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHhCCCEEEEeCC-CCh---HHh-----CCCEEEEECC
Confidence 68899999999999887788888899 787774421 122222223322222111 011 111 2789999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+..+.-......+... |.+++..+.....++-++...-..++++
T Consensus 81 ~d~~~n~~i~~~a~~~-~~lvN~~d~~~~~~f~~pa~~~~g~l~i 124 (457)
T PRK10637 81 DDDAVNQRVSEAAEAR-RIFCNVVDAPKAASFIMPSIIDRSPLMV 124 (457)
T ss_pred CCHHHhHHHHHHHHHc-CcEEEECCCcccCeEEEeeEEecCCEEE
Confidence 8866655666666665 8999887766555666555442234444
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.17 Score=50.28 Aligned_cols=71 Identities=23% Similarity=0.316 Sum_probs=48.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.++++||+|+|++|.+++..+...|+ +|+.+.++.++.+.+. .++. ..+.+. ++ .+......|++++|+
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~-~~~~~~----~~----~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGG-QALTLA----DL----ENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCC-ceeeHh----Hh----hhhccccCeEEEecc
Confidence 46889999999999999999999999 8999999887766554 3432 222221 11 111112568899887
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
+-
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 53
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.3 Score=49.13 Aligned_cols=75 Identities=15% Similarity=0.289 Sum_probs=56.7
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
++++|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...+.-.. .-.+.+++..-..+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~----~~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNA----ANEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCC----CCHHHHHhcCccccCEEEEEcCCh
Confidence 678999999999999999999998 899999999999999998876655321 112334433223788887776653
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.46 Score=44.25 Aligned_cols=86 Identities=24% Similarity=0.264 Sum_probs=56.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|.+|.|+|.|.+|..+++.++..|. +|++.+++.+...... .+ ..++.+.+. ..|+|+-+..
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~~--------~~---~~~l~ell~-----~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDFL--------TY---KDSVKEAIK-----DADIISLHVP 207 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhhh--------hc---cCCHHHHHh-----cCCEEEEeCC
Confidence 57899999999999999999999999 9999988765432110 01 112222222 4688877776
Q ss_pred ChH-----HHHHHHHHhccCCccEEEecc
Q 017052 273 DTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. .....+..|+++ ..+|.++-
T Consensus 208 ~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 432 123455667765 66666653
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.3 Score=49.73 Aligned_cols=78 Identities=21% Similarity=0.382 Sum_probs=58.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
.++|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...+.-.. .+. +.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDa-t~~---~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDA-TRM---DLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeC-CCH---HHHHhcCCCcCCEEEEEeCC
Confidence 3679999999999999999999999 899999999999999998875544211 122 23333322378999989887
Q ss_pred hHH
Q 017052 274 TGM 276 (378)
Q Consensus 274 ~~~ 276 (378)
++.
T Consensus 475 ~~~ 477 (621)
T PRK03562 475 PQT 477 (621)
T ss_pred HHH
Confidence 543
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.2 Score=50.33 Aligned_cols=79 Identities=20% Similarity=0.337 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.+.++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. ..|... . .|..+ .....+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4578999998 9999999999989999 7999999887665432 334322 2 24431 223333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 78999999874
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.37 Score=42.04 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=60.4
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeC-------CCCCCch-HHHHHHHH-
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLN-------PNDNNEP-VQQVIKRI- 259 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~-------~~~~~~~-~~~~i~~~- 259 (378)
...++.+||+.|+| .|.-++.||. .|. .|++++.++...+.+. +.+...... +....-. +...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 45677899999886 4788888875 699 8999999999887652 233221000 0000000 00001111
Q ss_pred --hCCCccEEEeccC--------ChHHHHHHHHHhccCCccEEEe
Q 017052 260 --TDGGADYSFECIG--------DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 --~~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+.||.|+|... -...+..+.++|+++ |+++.+
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1126899999653 124577888899997 875554
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.25 Score=44.03 Aligned_cols=79 Identities=24% Similarity=0.374 Sum_probs=46.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHH----HHHhCCCcE-E--eCCCCCCchHHHHHHHHh
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----~~~~----~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~ 260 (378)
.++++||+|+ |++|..+++.+...|+ +++.+.++. ++.+ .++..+... . .|..+ ..+..+.+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~ 84 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT-AAAVEKLFDDAK 84 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC-HHHHHHHHHHHH
Confidence 4689999988 9999999999988999 655554322 2221 122234322 2 23331 233333333332
Q ss_pred --CCCccEEEeccCC
Q 017052 261 --DGGADYSFECIGD 273 (378)
Q Consensus 261 --~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 85 ~~~~~id~li~~ag~ 99 (257)
T PRK12744 85 AAFGRPDIAINTVGK 99 (257)
T ss_pred HhhCCCCEEEECCcc
Confidence 2378999998874
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.26 Score=45.66 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=31.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~ 231 (378)
.+++|||+|+ |.+|..++..+...|+ +|+++.++.++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence 4789999988 9999999999988999 788777765543
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.36 Score=45.43 Aligned_cols=41 Identities=22% Similarity=0.221 Sum_probs=34.3
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
-..+.+|||+|+ |.+|..+++.+...|. +|+++.++.++..
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~ 48 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSL 48 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHH
Confidence 456789999987 9999999999988999 8888877766544
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.27 Score=43.61 Aligned_cols=79 Identities=15% Similarity=0.294 Sum_probs=48.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH-HhC---CCcE-Ee--CCCCCCchHHHHHHHHh---
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA-KAF---GVTE-FL--NPNDNNEPVQQVIKRIT--- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~-v~~~~~~~~~l-~~~---g~~~-vi--~~~~~~~~~~~~i~~~~--- 260 (378)
.+++++|+|+ |.+|..+++.+...|+ +|+. ..++.++.+.+ ..+ +... ++ |..+ ..++.+.+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 4679999998 9999999998888898 6765 45666554322 222 2221 22 3331 233433333322
Q ss_pred ----C-CCccEEEeccCC
Q 017052 261 ----D-GGADYSFECIGD 273 (378)
Q Consensus 261 ----~-~~~d~vid~~g~ 273 (378)
. +++|++|.+.|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 268999988874
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.22 Score=51.12 Aligned_cols=79 Identities=28% Similarity=0.349 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..++..+...|+ +|+++++++++.+.+. ..+... + .|..+ ..++.+.+.+.. .+
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 3678999998 9999999998888899 8999999887755432 223322 2 23331 233444444332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++.+.|.
T Consensus 448 ~id~li~~Ag~ 458 (657)
T PRK07201 448 HVDYLVNNAGR 458 (657)
T ss_pred CCCEEEECCCC
Confidence 68999998873
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.33 Score=44.01 Aligned_cols=74 Identities=16% Similarity=0.206 Sum_probs=46.0
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C----CC---cEE--eCCCCCCchHHHHHHHHhCC-Cc
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GV---TEF--LNPNDNNEPVQQVIKRITDG-GA 264 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~----g~---~~v--i~~~~~~~~~~~~i~~~~~~-~~ 264 (378)
|||+|+ |.+|..+++-+...+.++++.+++++.++..++. + .. ... ...- +-.-.+.+.++... ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vig--Dvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIG--DVRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CT--SCCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceee--cccCHHHHHHHHhhcCC
Confidence 799988 9999999999888898799999999988776644 4 11 111 1111 22234455655555 89
Q ss_pred cEEEeccC
Q 017052 265 DYSFECIG 272 (378)
Q Consensus 265 d~vid~~g 272 (378)
|+||.+..
T Consensus 79 diVfHaAA 86 (293)
T PF02719_consen 79 DIVFHAAA 86 (293)
T ss_dssp SEEEE---
T ss_pred CEEEEChh
Confidence 99999764
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.34 Score=47.74 Aligned_cols=69 Identities=29% Similarity=0.377 Sum_probs=48.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-----KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-----~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
.+++|+|+|+|.+|+.++.+++..|. +|++++.++. ..+.+++.|+....... .. ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~--~~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPG--PT---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCC--cc---------ccCCCCEE
Confidence 57799999999999999999999999 8988875542 23456677876554332 11 01156777
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
+.+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 777664
|
|
| >TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.72 Score=41.87 Aligned_cols=89 Identities=18% Similarity=0.253 Sum_probs=56.6
Q ss_pred eEEEEccChHHHHH-HHHHHHcCCCeEEEE-cCChhh--HHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 196 TVVIFGLGTVGLSV-AQGAKARGASRIIGV-DTNPEK--CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 196 ~VLI~Gag~vG~~a-iqla~~~g~~~vi~v-~~~~~~--~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+|.|+|+|.+|... ..+.+.-+. ++.++ +.++++ ++.++++|...... ++...+. ...+|+||+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~---~~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLA---NPDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhc---CCCCCEEEECC
Confidence 68899999999866 455555566 66655 444443 46677888765431 2222222 13799999999
Q ss_pred CChHHHHHHHHHhccCCccEEEecc
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+.....+.+..++.. |+.+....
T Consensus 73 p~~~H~e~a~~al~a--Gk~VIdek 95 (285)
T TIGR03215 73 SAKAHARHARLLAEL--GKIVIDLT 95 (285)
T ss_pred CcHHHHHHHHHHHHc--CCEEEECC
Confidence 987666666666665 66555433
|
Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc. |
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.28 Score=43.42 Aligned_cols=76 Identities=22% Similarity=0.223 Sum_probs=46.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |++|..+++.+...|+ +++.+ .+++++.+. ++..+... .+ |.. +..++.+.+.++. .++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVA-NEADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccC-CHHHHHHHHHHHHHhcCC
Confidence 57999998 9999999999988998 66554 455554332 22233222 22 332 1233444444332 237
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|++|.+.|
T Consensus 81 id~li~~ag 89 (248)
T PRK06947 81 LDALVNNAG 89 (248)
T ss_pred CCEEEECCc
Confidence 899998887
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.33 Score=39.97 Aligned_cols=95 Identities=20% Similarity=0.325 Sum_probs=54.9
Q ss_pred hhhchhhhhhHHHHHhhcCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 172 CLLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
..+||+....+..| +..++ -.|++|+|+|. ..+|.-+..++...|+ .|+...+..+
T Consensus 14 ~~~PcTp~aii~lL-~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T~-------------------- 71 (160)
T PF02882_consen 14 GFVPCTPLAIIELL-EYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKTK-------------------- 71 (160)
T ss_dssp SS--HHHHHHHHHH-HHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTSS--------------------
T ss_pred CCcCCCHHHHHHHH-HhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCCC--------------------
Confidence 44555444444434 55554 57999999998 6799999999999999 8887755421
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++.+.++ .+|+|+.++|.+..+. ...++++ ..++++|..
T Consensus 72 -~l~~~~~-----~ADIVVsa~G~~~~i~--~~~ik~g-avVIDvG~~ 110 (160)
T PF02882_consen 72 -NLQEITR-----RADIVVSAVGKPNLIK--ADWIKPG-AVVIDVGIN 110 (160)
T ss_dssp -SHHHHHT-----TSSEEEE-SSSTT-B---GGGS-TT-EEEEE--CE
T ss_pred -cccceee-----eccEEeeeeccccccc--cccccCC-cEEEecCCc
Confidence 2222222 4799999998865433 3356775 778887654
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.44 Score=43.05 Aligned_cols=95 Identities=20% Similarity=0.257 Sum_probs=65.1
Q ss_pred hhchhhhhhHHHHHhhcCCC-CCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~-~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+....+. |.+..++. .|++|+|+|.| .+|.-++.++...|+ .|+...+. ..
T Consensus 136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~---------------------t~ 192 (285)
T PRK14191 136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL---------------------TK 192 (285)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC---------------------cH
Confidence 45655444444 34666664 79999999985 899999999999999 78776321 11
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ .+|+|+-++|.+..+. -..++++ ..++++|...
T Consensus 193 ~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~~ 232 (285)
T PRK14191 193 DLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGINR 232 (285)
T ss_pred HHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeeccc
Confidence 2333333 4799999999876543 3356776 8888888643
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.27 Score=45.78 Aligned_cols=93 Identities=18% Similarity=0.231 Sum_probs=59.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
-.+++|+|+|| |.+|..+++.+.. .|..+++.+.++.++.+.+.. ++... -.++.+.+ ...|+|+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~-------i~~l~~~l-----~~aDiVv 220 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK-------ILSLEEAL-----PEADIVV 220 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc-------HHhHHHHH-----ccCCEEE
Confidence 46789999999 8999999988864 566689999998877766543 32111 11222222 1589999
Q ss_pred eccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 269 ECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.+++.+.....-...+.++ -.+++++.+
T Consensus 221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvP 248 (340)
T PRK14982 221 WVASMPKGVEIDPETLKKP-CLMIDGGYP 248 (340)
T ss_pred ECCcCCcCCcCCHHHhCCC-eEEEEecCC
Confidence 9888644321112344554 566676654
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.47 Score=43.46 Aligned_cols=44 Identities=27% Similarity=0.418 Sum_probs=37.5
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
.+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 368899999999988888888888 89999999998887777665
|
|
| >PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.13 Score=45.68 Aligned_cols=106 Identities=22% Similarity=0.266 Sum_probs=63.0
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcE-E-eCCCCC-CchHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTE-F-LNPNDN-NEPVQQVI 256 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~-v-i~~~~~-~~~~~~~i 256 (378)
+....++.||++||=-|.| .|.+...+|+..| ..+|+..+.++++.+.+++ +|... + +...+- ...+.+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~-- 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDE-- 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--ST--
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccc--
Confidence 4467899999999887653 2555666666554 2289999999998877754 56543 2 211110 111100
Q ss_pred HHHhCCCccEEE-eccCChHHHHHHHHHh-ccCCccEEEecc
Q 017052 257 KRITDGGADYSF-ECIGDTGMITTALQSC-CDGWGLAVTLGV 296 (378)
Q Consensus 257 ~~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 296 (378)
. ....+|.|| |--.--..+..+.+.| +++ |+++.+.-
T Consensus 109 -~-~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 109 -E-LESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp -T--TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred -c-ccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 0 113678766 6655446889999999 786 99998853
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A. |
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.66 Score=41.91 Aligned_cols=101 Identities=15% Similarity=0.170 Sum_probs=60.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc--EEeCCCC---CCchHHHHHHHHhCCCccE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EFLNPND---NNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~--~vi~~~~---~~~~~~~~i~~~~~~~~d~ 266 (378)
+..++||++|+|. |..+..+++.....++++++.+++-.+.++++-.. ...+... ...+..+.+++ ..+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence 3456999998854 44556667766555899999998887777663110 0000000 01122333333 2348998
Q ss_pred EE-ecc---C------ChHHHHHHHHHhccCCccEEEec
Q 017052 267 SF-ECI---G------DTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 267 vi-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
|+ |.. + ..+.++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 77 442 1 124456788899997 9988763
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.6 Score=37.53 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=63.1
Q ss_pred hhchhhhhhHHHHHhhcCCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+|+....... |.+..++. .|++|+|+|. ..+|.-++.++...|+ .|+.+.++..
T Consensus 7 ~~p~t~~a~~~-ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~--------------------- 63 (140)
T cd05212 7 FVSPVAKAVKE-LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI--------------------- 63 (140)
T ss_pred ccccHHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence 34444333333 34555654 7999999998 7899999999999998 8888865321
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ .+|+|+-++|.+..+. -..++++ ..++.+|...
T Consensus 64 ~l~~~v~-----~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~ 103 (140)
T cd05212 64 QLQSKVH-----DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK 103 (140)
T ss_pred CHHHHHh-----hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence 2222232 4799999999864433 4457875 7777766543
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=93.98 E-value=0.16 Score=45.32 Aligned_cols=73 Identities=15% Similarity=0.132 Sum_probs=51.4
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 273 (378)
+|||.|+.+-|..++..+...|. +|+++.+++...+.+...|...++.-..+..+ +.++... ++|+|+|++..
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~----l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGALDPQE----LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCCCHHH----HHHHHHhcCCCEEEEcCCH
Confidence 68999884459999988888898 89999899988888877765555422211222 3333333 89999999864
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.6 Score=42.65 Aligned_cols=93 Identities=16% Similarity=0.187 Sum_probs=55.0
Q ss_pred CeEEEEccChHHHHHHH-HHHHcCCCeEEEE-cCChh--hHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGLGTVGLSVAQ-GAKARGASRIIGV-DTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiq-la~~~g~~~vi~v-~~~~~--~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-+|.|+|.|.+|...+. +.+.-+. ++.++ +.+++ .+..++++|..... .++...+.......+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence 47899999999997554 4444466 66655 44443 34667778864432 123333332111369999999
Q ss_pred cCChHHHHHHHHHhccCCccEEEecc
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
++.....+.+..+... |..+....
T Consensus 78 T~a~~H~e~a~~a~ea--Gk~VID~s 101 (302)
T PRK08300 78 TSAGAHVRHAAKLREA--GIRAIDLT 101 (302)
T ss_pred CCHHHHHHHHHHHHHc--CCeEEECC
Confidence 9986555555555554 55554433
|
|
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.75 Score=41.14 Aligned_cols=93 Identities=23% Similarity=0.258 Sum_probs=59.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHHHhCCCc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~~~~~~~ 264 (378)
.++.+||-+|+| .|..+..+++. |. +|++++.+++..+.+++ .|.. .++.. +.. .+.....+.+
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-----d~~-~l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-----AAQ-DIAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-----CHH-HHhhhcCCCC
Confidence 456788888875 36777777775 77 89999999998887765 2321 12211 111 1222223479
Q ss_pred cEEEecc-----CC-hHHHHHHHHHhccCCccEEEe
Q 017052 265 DYSFECI-----GD-TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 265 d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 294 (378)
|+|+-.. .. ...+..+.+.|+++ |+++.+
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 9988432 12 24577888999997 998765
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.14 Score=47.93 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=31.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.++++|||+|+ |.+|..+++.+...|. +|++++++.+
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~ 41 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSS 41 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccc
Confidence 35789999988 9999999999999999 8988877543
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.95 E-value=0.35 Score=42.53 Aligned_cols=77 Identities=17% Similarity=0.265 Sum_probs=47.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCC---Cc-EEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFG---VT-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g---~~-~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |.+|..+++.+...|. +|+.++++.+ ..+..+.+. .. .++ |..+ ..++.+.+.... .++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD-TEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 47899987 9999999998888898 8999888743 222222222 11 122 3321 233333333332 237
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12824 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 8999998874
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.67 Score=43.65 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=30.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.+.+|+|+|+|++|-.++..+..+|..+++.++.+
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999888888764
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.3 Score=44.18 Aligned_cols=36 Identities=28% Similarity=0.258 Sum_probs=31.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
...+|+|+|+|++|..+++.+..+|..++..++.+.
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 467899999999999999999999998888887653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.38 Score=42.57 Aligned_cols=78 Identities=19% Similarity=0.205 Sum_probs=46.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH-HhCCCcE-Ee--CCCCCCchHHHHHHHH---hCCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRI---TDGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~~l-~~~g~~~-vi--~~~~~~~~~~~~i~~~---~~~~ 263 (378)
.++++||+|+ |.+|..++..+...|+ +|+.+. ++.++.+.+ ..++... .+ |..+ ..++.+.+.+. .+.+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCC
Confidence 3578999988 9999999999888999 676654 344444333 3343221 22 3331 22333333332 2224
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|++|.+.|
T Consensus 82 id~li~~ag 90 (253)
T PRK08642 82 ITTVVNNAL 90 (253)
T ss_pred CeEEEECCC
Confidence 899998875
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=93.93 E-value=0.37 Score=48.84 Aligned_cols=93 Identities=12% Similarity=0.143 Sum_probs=65.4
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
++|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...++-. ..-.+.+++.--..+|.++-+++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GD----at~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGD----ATQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEee----CCCHHHHHhcCCccCCEEEEEeCCH
Confidence 578999999999999999999999 89999999999999999887654421 1122234433223789999998875
Q ss_pred HHHHH---HHHHhccCCccEEE
Q 017052 275 GMITT---ALQSCCDGWGLAVT 293 (378)
Q Consensus 275 ~~~~~---~~~~l~~~~G~~v~ 293 (378)
+.-.. ..+...++ .+++.
T Consensus 476 ~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 43322 23444454 45543
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.43 Score=43.12 Aligned_cols=94 Identities=17% Similarity=0.285 Sum_probs=65.7
Q ss_pred hhchhhhhhHHHHHhhcCCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
..||+....+..| +..++. .|++|+|+|- ..+|.-+..++...|+ .|+...+.. .
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T---------------------~ 194 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT---------------------K 194 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC---------------------C
Confidence 3565544444433 666654 6999999998 5599999999999999 888775431 1
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++.+.++ .+|+++.++|.+..+.. ..++++ ..++++|..
T Consensus 195 ~l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 195 NLRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CHHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2333333 57999999998765443 667886 888888854
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.38 Score=42.70 Aligned_cols=75 Identities=17% Similarity=0.315 Sum_probs=47.7
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCc--EEe--CCCCCCchHHHHHHHHh--CCCc
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT--EFL--NPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~--~vi--~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
++||+|+ +++|.+++..+. .|. +|+.+++++++.+.+ ++.+.. ..+ |..+ ..+..+.+.+.. .+++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD-LDTHRELVKQTQELAGEI 78 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC-HHHHHHHHHHHHHhcCCC
Confidence 6899988 899999988766 487 888888888776544 233432 222 3332 233333333332 2478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++.+.|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999988774
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.76 Score=38.89 Aligned_cols=97 Identities=21% Similarity=0.268 Sum_probs=61.4
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~~ 260 (378)
....+.++.+||=+|+|. |..++.+++.....++++++.+++..+.+++ ++... ++.. + .... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d--~~~~----~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---E--APIE----L 94 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---C--chhh----c
Confidence 445677889999888753 6666666766533389999999987776654 34322 2221 1 1111 1
Q ss_pred CCCccEEEeccC-C--hHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIG-D--TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g-~--~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|+|+.... . ...+..+.+.|+++ |+++..
T Consensus 95 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 95 PGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred CcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 237899885332 1 23567788899997 988764
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.38 Score=44.14 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=56.1
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC-CchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN-NEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~-~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|+|+|+|.+|..++..+...|. +|+.+++++++.+.+++.|... -+-+.. ........... ..+|+||-++...
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~d~vila~k~~ 77 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL-EDGEITVPVLAADDPAEL--GPQDLVILAVKAY 77 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc-cCCceeecccCCCChhHc--CCCCEEEEecccc
Confidence 58999999999999988888898 8999988888877777655421 000000 00000001111 3789999998764
Q ss_pred HHHHHHHHH----hccCCccEEEe
Q 017052 275 GMITTALQS----CCDGWGLAVTL 294 (378)
Q Consensus 275 ~~~~~~~~~----l~~~~G~~v~~ 294 (378)
. +..+++. +.++ ..++.+
T Consensus 78 ~-~~~~~~~l~~~l~~~-~~iv~~ 99 (304)
T PRK06522 78 Q-LPAALPSLAPLLGPD-TPVLFL 99 (304)
T ss_pred c-HHHHHHHHhhhcCCC-CEEEEe
Confidence 2 3444433 3333 455554
|
|
| >TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.55 Score=45.51 Aligned_cols=102 Identities=11% Similarity=0.113 Sum_probs=61.1
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHH
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~ 259 (378)
...++++|++||=.|+|+ |-.++.+++.++..+|++++.++++.+.++ ++|... + .+.+ ...... . .
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d--~~~~~~-~--~ 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGD--GRGPSQ-W--A 305 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccc--cccccc-c--c
Confidence 445678999999987642 333334455444238999999999877654 466652 2 2211 111100 0 0
Q ss_pred hCCCccEEE-e--ccCCh-------------------------HHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSF-E--CIGDT-------------------------GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.||.|| | |+|.. ..+..+++.++++ |+++...
T Consensus 306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvyst 368 (426)
T TIGR00563 306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYAT 368 (426)
T ss_pred cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 123699887 4 45421 3567788899997 9988653
|
The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles. |
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.41 Score=42.18 Aligned_cols=79 Identities=22% Similarity=0.231 Sum_probs=47.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC----ChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT----NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~----~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~ 260 (378)
.++++||+|+ |.+|+.++..+...|+ +++.+++ +.++.+.+ +..+... ++ |.. +...+...+..+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~ 82 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA-DVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVR-DFAATRAALDAGV 82 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHH
Confidence 4678999998 9999999998888999 7777554 22332222 2223222 22 332 1223333333322
Q ss_pred --CCCccEEEeccCC
Q 017052 261 --DGGADYSFECIGD 273 (378)
Q Consensus 261 --~~~~d~vid~~g~ 273 (378)
.+++|.+|.+.|.
T Consensus 83 ~~~~~~d~vi~~ag~ 97 (249)
T PRK12827 83 EEFGRLDILVNNAGI 97 (249)
T ss_pred HHhCCCCEEEECCCC
Confidence 1378999998874
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.79 Score=40.40 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=29.1
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+|||+|+|++|..++..+..+|..+++.++.+.
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D~ 33 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMDT 33 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999999999998888887643
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=93.81 E-value=0.22 Score=46.29 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=46.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HhCCCc--EEe--CCCCCCchHHHHHHHHhCCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA-KAFGVT--EFL--NPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l-~~~g~~--~vi--~~~~~~~~~~~~i~~~~~~~~d 265 (378)
.|++|||+|+ |.+|..+++.+...| ..+|++++++..+...+ +.+... .++ |.. +. +.+.+... ++|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~--d~---~~l~~~~~-~iD 76 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVR--DK---ERLTRALR-GVD 76 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCC--CH---HHHHHHHh-cCC
Confidence 4789999988 999999998877665 22788888776654333 223211 122 333 22 12222222 589
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+||.+.+.
T Consensus 77 ~Vih~Ag~ 84 (324)
T TIGR03589 77 YVVHAAAL 84 (324)
T ss_pred EEEECccc
Confidence 99998763
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.36 Score=42.50 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=48.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHH----HHhCCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~-v~~~~~~~~~----l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++||+|+ |.+|..+++.+...|+ +|++ ..+++++.+. ++..+... . .|..+ ...+.+.+.+.. .++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD-ENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC-HHHHHHHHHHHHHhCCC
Confidence 47899998 9999999999888999 6765 4566554332 22333322 2 23331 333444444432 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (247)
T PRK09730 80 LAALVNNAGI 89 (247)
T ss_pred CCEEEECCCC
Confidence 8999999884
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.37 Score=46.06 Aligned_cols=36 Identities=31% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
...+|||+|+|++|..+++.+..+|..+++.++.+.
T Consensus 37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ 72 (390)
T PRK07411 37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV 72 (390)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 356899999999999999999999998888887643
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.39 Score=42.81 Aligned_cols=80 Identities=18% Similarity=0.248 Sum_probs=48.8
Q ss_pred CCCCeEEEEccC---hHHHHHHHHHHHcCCCeEEEEcCC-----------hhh----HHHHHhCCCcE-E--eCCCCCCc
Q 017052 192 SKGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTN-----------PEK----CEKAKAFGVTE-F--LNPNDNNE 250 (378)
Q Consensus 192 ~~g~~VLI~Gag---~vG~~aiqla~~~g~~~vi~v~~~-----------~~~----~~~l~~~g~~~-v--i~~~~~~~ 250 (378)
-+|+++||+|++ ++|..++..+...|+ +|+.+.++ .++ .+.+++.|... . .|.+ +.+
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-~~~ 81 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLT-QND 81 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCC-CHH
Confidence 367899999883 799999999999999 77776421 111 12233445433 2 2333 233
Q ss_pred hHHHHHHHHhC--CCccEEEeccCC
Q 017052 251 PVQQVIKRITD--GGADYSFECIGD 273 (378)
Q Consensus 251 ~~~~~i~~~~~--~~~d~vid~~g~ 273 (378)
+..+.+.+... +.+|++|.+.|.
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~ 106 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAY 106 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCC
Confidence 44444444332 368999988763
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.11 Score=46.15 Aligned_cols=66 Identities=18% Similarity=0.231 Sum_probs=46.2
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
|+|+|+ |.+|..+++.++..|. +|+.+.|++.+.+........ .. +.+.+....++|+||+-.|.+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh-~v~iltR~~~~~~~~~~~~v~---~~--------~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGH-QVTILTRRPPKASQNLHPNVT---LW--------EGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCC-eEEEEEcCCcchhhhcCcccc---cc--------chhhhcccCCCCEEEECCCCc
Confidence 578988 9999999999999998 899998988877654332211 11 122222222689999988864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 378 | ||||
| 4dl9_A | 396 | Crystal Structure Of S-nitrosoglutathione Reductase | 1e-104 | ||
| 3uko_A | 378 | Crystal Structure Of S-Nitrosoglutathione Reductase | 5e-98 | ||
| 1cdo_A | 374 | Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co | 3e-86 | ||
| 1mc5_A | 374 | Ternary Complex Of Human Glutathione-Dependent Form | 1e-83 | ||
| 3qj5_A | 374 | S-Nitrosoglutathione Reductase (Gsnor) In Complex W | 1e-83 | ||
| 1teh_A | 373 | Structure Of Human Liver Chichi Alcohol Dehydrogena | 1e-83 | ||
| 2fzw_A | 373 | Structure Of The Binary Complex Of The E67l Mutant | 1e-82 | ||
| 1ee2_A | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 3e-78 | ||
| 1ee2_B | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 3e-78 | ||
| 6adh_A | 374 | Structure Of Triclinic Ternary Complex Of Horse Liv | 4e-78 | ||
| 1qv6_A | 374 | Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG | 6e-78 | ||
| 1n8k_A | 374 | Horse Liver Alcohol Dehydrogenase Val292thr Mutant | 8e-78 | ||
| 3oq6_A | 374 | Horse Liver Alcohol Dehydrogenase A317c Mutant Comp | 8e-78 | ||
| 1ju9_A | 374 | Horse Liver Alcohol Dehydrogenase Val292ser Mutant | 1e-77 | ||
| 1axg_A | 374 | Crystal Structure Of The Val203->ala Mutant Of Live | 1e-77 | ||
| 1ht0_A | 374 | Human Gamma-2 Alcohol Dehydrogense Length = 374 | 3e-77 | ||
| 1axe_A | 374 | Crystal Structure Of The Active-Site Mutant Phe93-> | 3e-77 | ||
| 1hdx_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 3e-77 | ||
| 1mgo_A | 374 | Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L | 4e-77 | ||
| 1a71_A | 374 | Ternary Complex Of An Active Site Double Mutant Of | 6e-77 | ||
| 1hdy_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 1e-76 | ||
| 1qlh_A | 374 | Horse Liver Alcohol Dehydrogenase Complexed To Nad | 2e-76 | ||
| 1hdz_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 3e-76 | ||
| 1htb_A | 374 | Crystallization Of Human Beta3 Alcohol Dehydrogenas | 4e-76 | ||
| 3cos_A | 381 | Crystal Structure Of Human Class Ii Alcohol Dehydro | 7e-75 | ||
| 1hso_A | 374 | Human Alpha Alcohol Dehydrogenase (Adh1a) Length = | 4e-74 | ||
| 1e3l_A | 376 | P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase | 5e-74 | ||
| 1e3e_A | 376 | Mouse Class Ii Alcohol Dehydrogenase Complex With N | 7e-74 | ||
| 1agn_A | 373 | X-Ray Structure Of Human Sigma Alcohol Dehydrogenas | 1e-73 | ||
| 1d1t_A | 373 | Mutant Of Human Sigma Alcohol Dehydrogenase With Le | 1e-73 | ||
| 1p0c_A | 373 | Crystal Structure Of The Nadp(H)-Dependent Vertebra | 1e-66 | ||
| 1f8f_A | 371 | Crystal Structure Of Benzyl Alcohol Dehydrogenase F | 2e-35 | ||
| 2dq4_A | 343 | Crystal Structure Of Threonine 3-Dehydrogenase Leng | 4e-19 | ||
| 2nvb_A | 352 | Contribution Of Pro275 To The Thermostability Of Th | 3e-17 | ||
| 1ykf_A | 352 | Nadp-Dependent Alcohol Dehydrogenase From Thermoana | 4e-17 | ||
| 3ftn_A | 352 | Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO | 4e-16 | ||
| 3fpl_A | 351 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 4e-16 | ||
| 3fsr_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 6e-16 | ||
| 3two_A | 348 | The Crystal Structure Of Cad From Helicobacter Pylo | 4e-15 | ||
| 1ped_A | 351 | Bacterial Secondary Alcohol Dehydrogenase (Apo-Form | 6e-15 | ||
| 2b83_A | 351 | A Single Amino Acid Substitution In The Clostridium | 9e-15 | ||
| 4a2c_A | 346 | Crystal Structure Of Galactitol-1-Phosphate Dehydro | 1e-14 | ||
| 1jqb_A | 351 | Alcohol Dehydrogenase From Clostridium Beijerinckii | 6e-14 | ||
| 3gfb_A | 350 | L-Threonine Dehydrogenase (Tktdh) From The Hyperthe | 9e-14 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 1e-13 | ||
| 2dfv_A | 347 | Hyperthermophilic Threonine Dehydrogenase From Pyro | 3e-13 | ||
| 2d8a_A | 348 | Crystal Structure Of Ph0655 From Pyrococcus Horikos | 3e-13 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 2e-12 | ||
| 4ilk_A | 359 | Crystal Structure Of Short Chain Alcohol Dehydrogen | 3e-12 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 4e-12 | ||
| 3s1l_A | 340 | Crystal Structure Of Apo-Form Furx Length = 340 | 8e-12 | ||
| 1llu_A | 342 | The Ternary Complex Of Pseudomonas Aeruginosa Alcoh | 1e-11 | ||
| 2xaa_A | 345 | Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube | 1e-11 | ||
| 3fpc_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 5e-10 | ||
| 2eih_A | 343 | Crystal Structure Of Nad-Dependent Alcohol Dehydrog | 2e-09 | ||
| 4eez_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 1e-08 | ||
| 4eex_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 1e-08 | ||
| 2h6e_A | 344 | Crystal Structure Of The D-Arabinose Dehydrogenase | 2e-08 | ||
| 1vj0_A | 380 | Crystal Structure Of Alcohol Dehydrogenase (Tm0436) | 2e-08 | ||
| 1e3j_A | 352 | Ketose Reductase (Sorbitol Dehydrogenase) From Silv | 5e-08 | ||
| 3uog_A | 363 | Crystal Structure Of Putative Alcohol Dehydrogenase | 8e-08 | ||
| 2oui_A | 360 | D275p Mutant Of Alcohol Dehydrogenase From Protozoa | 1e-07 | ||
| 4ej6_A | 370 | Crystal Structure Of A Putative Zinc-Binding Dehydr | 2e-07 | ||
| 1yqd_A | 366 | Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ | 2e-07 | ||
| 1uuf_A | 369 | Crystal Structure Of A Zinc-Type Alcohol Dehydrogen | 3e-07 | ||
| 3qe3_A | 355 | Sheep Liver Sorbitol Dehydrogenase Length = 355 | 6e-07 | ||
| 2eer_A | 347 | Structural Study Of Project Id St2577 From Sulfolob | 2e-06 | ||
| 1y9a_A | 360 | Alcohol Dehydrogenase From Entamoeba Histolotica In | 4e-06 | ||
| 2hcy_A | 347 | Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi | 4e-06 | ||
| 3m6i_A | 363 | L-Arabinitol 4-Dehydrogenase Length = 363 | 4e-06 | ||
| 2dph_A | 398 | Crystal Structure Of Formaldehyde Dismutase Length | 5e-06 | ||
| 3ip1_A | 404 | Structure Of Putative Alcohol Dehydrogenase (Tm_042 | 6e-06 | ||
| 1kol_A | 398 | Crystal Structure Of Formaldehyde Dehydrogenase Len | 1e-05 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 3e-05 | ||
| 3qwa_A | 334 | Crystal Structure Of Saccharomyces Cerevisiae Zeta- | 6e-05 |
| >pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396 | Back alignment and structure |
|
| >pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378 | Back alignment and structure |
|
| >pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374 | Back alignment and structure |
|
| >pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374 | Back alignment and structure |
|
| >pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374 | Back alignment and structure |
|
| >pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373 | Back alignment and structure |
|
| >pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373 | Back alignment and structure |
|
| >pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374 | Back alignment and structure |
|
| >pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374 | Back alignment and structure |
|
| >pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374 | Back alignment and structure |
|
| >pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374 | Back alignment and structure |
|
| >pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381 | Back alignment and structure |
|
| >pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374 | Back alignment and structure |
|
| >pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373 | Back alignment and structure |
|
| >pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373 | Back alignment and structure |
|
| >pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373 | Back alignment and structure |
|
| >pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371 | Back alignment and structure |
|
| >pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352 | Back alignment and structure |
|
| >pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352 | Back alignment and structure |
|
| >pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351 | Back alignment and structure |
|
| >pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348 | Back alignment and structure |
|
| >pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351 | Back alignment and structure |
|
| >pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351 | Back alignment and structure |
|
| >pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346 | Back alignment and structure |
|
| >pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351 | Back alignment and structure |
|
| >pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347 | Back alignment and structure |
|
| >pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340 | Back alignment and structure |
|
| >pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342 | Back alignment and structure |
|
| >pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345 | Back alignment and structure |
|
| >pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352 | Back alignment and structure |
|
| >pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348 | Back alignment and structure |
|
| >pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348 | Back alignment and structure |
|
| >pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344 | Back alignment and structure |
|
| >pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380 | Back alignment and structure |
|
| >pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352 | Back alignment and structure |
|
| >pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363 | Back alignment and structure |
|
| >pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360 | Back alignment and structure |
|
| >pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370 | Back alignment and structure |
|
| >pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366 | Back alignment and structure |
|
| >pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369 | Back alignment and structure |
|
| >pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355 | Back alignment and structure |
|
| >pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347 | Back alignment and structure |
|
| >pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360 | Back alignment and structure |
|
| >pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347 | Back alignment and structure |
|
| >pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363 | Back alignment and structure |
|
| >pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398 | Back alignment and structure |
|
| >pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404 | Back alignment and structure |
|
| >pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373 | Back alignment and structure |
|---|
Score = 573 bits (1480), Expect = 0.0
Identities = 175/371 (47%), Positives = 247/371 (66%), Gaps = 3/371 (0%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPR 65
+VI CKAAVAW AG+PL +EE+EV PP+ E+RIK++ T++C +D + FP
Sbjct: 3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I GH +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +
Sbjct: 63 ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
D +RF+ KGK + HY S+FSEYTVV K+ +APL+K+CLL CG+S G GAA
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GS +FGLG VGL+V G K GASRIIGVD N +K +AK FG TE +NP
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 242
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C GWG++V +GV E+A
Sbjct: 243 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIAT 302
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMK 365
++GRT KG+ FGGWK +P LV+ Y+ K+ VDEF+THNL F++IN+AF LM
Sbjct: 303 RPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMH 362
Query: 366 EGKCLRSVIHM 376
GK +R+V+ +
Sbjct: 363 SGKSIRTVVKI 373
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376 | Back alignment and structure |
|---|
Score = 566 bits (1461), Expect = 0.0
Identities = 167/373 (44%), Positives = 231/373 (61%), Gaps = 8/373 (2%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRI 66
+VI CKAA+AW G PL +EE+EV+PP+ E+RI+V+ T +C +DI A + +A+FP +
Sbjct: 5 KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVV 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RG 122
GHE +GIVESVGPGVT F G+ V+ F +CK C+ C S +N C L +
Sbjct: 65 LGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGL 182
+ D+ +RF+ KG+ +YH+ VSSFS+YTVV +V A LE++CL+ CG S+G
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGY 184
Query: 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
GAA N A ++ GST +FGLG VGLS G K GASRII +D N EK KAKA G T+
Sbjct: 185 GAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC 244
Query: 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
LNP + ++PVQ VI +T GG DYS +C G + A+ GWG +G E
Sbjct: 245 LNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK--VDE 302
Query: 303 VAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFN 362
+ + GR++ G+ FGGWK +P+LV+ Y K+F +D +TH L FE IN A +
Sbjct: 303 MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAID 362
Query: 363 LMKEGKCLRSVIH 375
LMKEGK +R+++
Sbjct: 363 LMKEGKSIRTILT 375
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374 | Back alignment and structure |
|---|
Score = 562 bits (1452), Expect = 0.0
Identities = 169/370 (45%), Positives = 238/370 (64%), Gaps = 4/370 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRI 66
+VI CKAAV W +P +EEVEV PP+ E+RIK+V T +CRSD P I
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L RG M
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM- 123
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
D +RF+ +GKP++H+ S+FS+YTVV K+ + +PLEK+CL+ CG S G G+A
Sbjct: 124 QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
VA +++GST +FGLG VGLSV G KA GA+RIIGVD N +K KAK G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
D +P+Q+V+ +++GG D+SFE IG + TAL C + +G++V +GVP ++
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMK 365
+ L LSGRT KG++FGG+K K +P LV ++ K+F +D ITH L FE IN+ F+L++
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLR 363
Query: 366 EGKCLRSVIH 375
G+ +R+++
Sbjct: 364 SGESIRTILT 373
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374 | Back alignment and structure |
|---|
Score = 562 bits (1450), Expect = 0.0
Identities = 178/371 (47%), Positives = 248/371 (66%), Gaps = 4/371 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET---QAIFPR 65
+VI CKAAVAW A +PLV+EE+EV+ P EIRIK++ T +C +D+ + FP
Sbjct: 5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPV 64
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
+ GHE +GIVESVGPGVTEF GE V+ +FI +C CR C+S K+N C +
Sbjct: 65 VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
S ++TRF+ KG+ V + S+FS+YTVV+ K+ APL+ +CLL CG+S G GAA
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAA 184
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
N A + GST +FGLG VGL+ G + GA RII VD NP+K EKAK FG T+F+NP
Sbjct: 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP 244
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
ND++EP+ QV+ ++T+GG D+S EC+G+ G++ AL+SC GWG++V +G L +VA
Sbjct: 245 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-DVAT 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMK 365
++GRT KGS+FGG+K K +P +V YL K+ +DEFITH + E +N A +LMK
Sbjct: 304 RPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMK 363
Query: 366 EGKCLRSVIHM 376
GKC+R+V+ +
Sbjct: 364 HGKCIRTVLSL 374
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373 | Back alignment and structure |
|---|
Score = 560 bits (1446), Expect = 0.0
Identities = 162/378 (42%), Positives = 231/378 (61%), Gaps = 9/378 (2%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-- 58
M T + ITCKAAVAW +PL +E + V PP+ E+RIK++ + +C SD + +
Sbjct: 1 MCT---AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEI 57
Query: 59 TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL 118
+ FP I GHEA G+VES+G GVT G+ V+ +F+ +C +CR CKS SN CE +
Sbjct: 58 IPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDM 117
Query: 119 ER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCG 177
G+M +D +RF+ +GKP+Y+ S+F+EYTVV K+ APLE CL+ CG
Sbjct: 118 GAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCG 175
Query: 178 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
+ G GAA N A ++ GST +FGLG VG S G KA GASRIIGV T+ +K KA
Sbjct: 176 FATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL 235
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
G TE LNP D ++P+ +VI T+GG DY+ EC G + ALQS G G+ V LG+
Sbjct: 236 GATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLA 295
Query: 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI 357
+ L L+GR+LKGS+FGG+K + ++ LV+ Y+KK+ V+ ++ L + I
Sbjct: 296 SPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQI 354
Query: 358 NQAFNLMKEGKCLRSVIH 375
N+AF L+ G+ +RS++
Sbjct: 355 NKAFELLSSGQGVRSIMI 372
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 471 bits (1215), Expect = e-167
Identities = 115/374 (30%), Positives = 178/374 (47%), Gaps = 12/374 (3%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI--FPRI 66
++ AAV G ++ +++ PQ +E+ +KVV T +C +D+ + + P +
Sbjct: 3 ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAV 62
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE-VLGLERRGVMH 125
GHE SGI+E++GP VTE G+HV+ + G C C QC + C G G
Sbjct: 63 LGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD- 120
Query: 126 SDQQTRFSIKGKPVY--HYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
S+ + V H+ A SSF+ Y + VKV+ P+E + L CG+ G G
Sbjct: 121 SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAG 180
Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
A N ++ S+ V +G G VGLS AK GAS II VD + E AK G T +
Sbjct: 181 ACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI 240
Query: 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
N + IK ITDGG +++ E G ++ + + G +G P+L
Sbjct: 241 NSKT--QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTA 297
Query: 304 AAH-YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFN 362
L L G+T+ G + G PK +P LV Y + +F D+ + F++INQA
Sbjct: 298 QFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAI 356
Query: 363 LMKEGKCLRSVIHM 376
++G L+ +I +
Sbjct: 357 DSRKGITLKPIIKI 370
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 401 bits (1033), Expect = e-139
Identities = 85/379 (22%), Positives = 148/379 (39%), Gaps = 29/379 (7%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIF 67
+ A V QPLV +E E++ I ++++ +C SD+ + + P I
Sbjct: 16 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 75
Query: 68 GHEASGIVESVGPGVT-----EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
GHE +G V V G+ ++ C C CK K R+
Sbjct: 76 GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYL---CPNRKV 132
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAG 181
+ + + H +S + V+ +KVS L+ + + C +
Sbjct: 133 YGINRGCSEYP-------HL--RGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATA 183
Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
A + G TVVI G G +GL A++ GA +I + +P + + A+ G
Sbjct: 184 YHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL 243
Query: 242 FLNPND-NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299
LN + + E ++ I IT G GAD+ E GD+ + + G G GV
Sbjct: 244 TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVP 302
Query: 300 KPEVA--AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI 357
+ V + L L T KG + V+ + ++ + ITH L ++
Sbjct: 303 QDPVPFKVYEWLVLKNATFKGIWVSDT---SHFVKTVSITSRNYQLLSKLITHRLPLKEA 359
Query: 358 NQAFNLMKEGKCLRSVIHM 376
N+A LM+ + L+ +++
Sbjct: 360 NKALELMESREALKVILYP 378
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 241 bits (617), Expect = 2e-77
Identities = 85/369 (23%), Positives = 134/369 (36%), Gaps = 35/369 (9%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI-----FPRIFG 68
KA G VV ++ P P EI +KV LC SDI + A P G
Sbjct: 2 KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
HE G V +G GVT F G+ V C C C + N C
Sbjct: 62 HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCT-------------- 107
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWN 187
R + G + S +EY +V S + + P+ L GL+ +
Sbjct: 108 --RAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRV 165
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
+ + GST V+ G+G +G Q +A A+R+I VD + ++ A+ G +
Sbjct: 166 LPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA 225
Query: 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
I+ +T G GA F+ +G I TA Q G +G+
Sbjct: 226 G---AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHAKVG- 280
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKE 366
+ + G ++ +G +L +V + T ++ A+ ++E
Sbjct: 281 FFMIPFGASVVTPYWGTRS---ELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLRE 334
Query: 367 GKCL-RSVI 374
G R V+
Sbjct: 335 GSIRGRGVV 343
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 208 bits (532), Expect = 2e-64
Identities = 74/376 (19%), Positives = 142/376 (37%), Gaps = 45/376 (11%)
Query: 14 KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPRI 66
KAA +PL +E+V+ ++ +++ +C +D+ + Q P
Sbjct: 17 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 76
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHE G +E V GV +G+ V+ TC C++ + CE +
Sbjct: 77 LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCE-----------N 125
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC----LLSCGLSAGL 182
+ +I G F+E+ +K+ EK+ L G++A
Sbjct: 126 LEFPGLNIDG----------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYR 175
Query: 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
+ G+ V I G+G +G Q K + +I +D EK + A+ G
Sbjct: 176 AVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHV 235
Query: 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP-KLKP 301
++ + PV+QV++ G + + + +G + G + +G +L+
Sbjct: 236 VDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGGELRF 292
Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAF 361
+ S + +GSL G +L LV L+ + V ++IN
Sbjct: 293 PTI---RVISSEVSFEGSLVG---NYVELHELVTLALQGKVRV---EVDIHKLDEINDVL 343
Query: 362 NLMKEGKCLRSVIHMP 377
+++G+ L + +P
Sbjct: 344 ERLEKGEVLGRAVLIP 359
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 207 bits (530), Expect = 5e-64
Identities = 81/378 (21%), Positives = 136/378 (35%), Gaps = 57/378 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFPRIFGHEA 71
KA G + V V + P P+++ +KV +C +D + E + P GHE
Sbjct: 25 KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTPPVTLGHEF 83
Query: 72 SGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCE---VLGLERRGVMHSD 127
GIV G V + G + T C C QC++ + N C +G+ R G
Sbjct: 84 CGIVVEAGSAVRDIAPGARI-TGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDG----- 137
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSAGLGA 184
F+EY +V A ++ L+C L
Sbjct: 138 -------------------GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL-----H 173
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
+++ I GSTV I G G +GL Q A+ GA+ +I K A+ G T ++
Sbjct: 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD 233
Query: 245 PNDNNEPVQQVIKRITDG---GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
P+ V + I G D EC G + + + G G V LGV
Sbjct: 234 PSA--GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGE 290
Query: 302 EVA-AHYGLFLSGRTLKGSLFGG---WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI 357
+V + + + GS F + DL + ++ +D I+ + ++
Sbjct: 291 KVEIEPFDILFRELRVLGS-FINPFVHRRAADL--VATGAIE----IDRMISRRISLDEA 343
Query: 358 NQAFNLMKEGKCLRSVIH 375
+ ++ ++
Sbjct: 344 PDVISNPAAAGEVKVLVI 361
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 205 bits (524), Expect = 2e-63
Identities = 91/378 (24%), Positives = 145/378 (38%), Gaps = 55/378 (14%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIF 67
+A + L + + V P P EI ++V S+C +D+ W+ A P +
Sbjct: 2 RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKSDKSNTCE---VLGLER 120
GHE SG+VE+VGPGV G+HV E C C C++ + C +LG++R
Sbjct: 62 GHEFSGVVEAVGPGVRRPQVGDHV----SLESHIVCHACPACRTGNYHVCLNTQILGVDR 117
Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCG 177
G F+EY VV + A P E +
Sbjct: 118 DG------------------------GFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNA 153
Query: 178 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
+ G +V+I G G +GL A +A GA I+ D NP + A+ +
Sbjct: 154 V-----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY 208
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
+NP + E + +V++R+T G + E G+ I L + G G A LG+P
Sbjct: 209 A-DRLVNPLE--EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIP 264
Query: 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI 357
L + G T G G + + +TH L
Sbjct: 265 SDPIRFDLAGELVMRGITAFGIA--GRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRY 322
Query: 358 NQAFNLMKEGKCLRSVIH 375
+AF L+ G+ ++ ++
Sbjct: 323 REAFGLLASGQAVKVILD 340
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 205 bits (523), Expect = 2e-63
Identities = 97/379 (25%), Positives = 147/379 (38%), Gaps = 57/379 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIF 67
A + G + EV+V P P E+ IKV+ TS+C +D+ +E P+I
Sbjct: 6 VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKSDKSNTCE---VLGLER 120
GHE +G V +GPGV G++V E C C C+ + + C+ + G++
Sbjct: 66 GHEVAGEVVEIGPGVEGIEVGDYV----SVETHIVCGKCYACRRGQYHVCQNTKIFGVDT 121
Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCG 177
G F+EY VV + K P E L L
Sbjct: 122 DG------------------------VFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNA 157
Query: 178 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
+ L G +V+I G G +GL AKA GA +I + + + E AK
Sbjct: 158 VDTVLAG------PISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV 211
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
G +NP + E V + + ITDG G D E G + LQ+ G LG+
Sbjct: 212 GADYVINPFE--EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL 268
Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNL-LFE 355
K + + + T+ G G ++ + +D ITH F+
Sbjct: 269 YPGKVTIDFNNLIIFKALTIYGIT--GRHLWETWYTVSRLLQSGKLNLDPIITHKYKGFD 326
Query: 356 DINQAFNLMKEGKCLRSVI 374
+AF LM+ GK + V
Sbjct: 327 KYEEAFELMRAGKTGKVVF 345
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 1e-61
Identities = 80/378 (21%), Positives = 140/378 (37%), Gaps = 50/378 (13%)
Query: 14 KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWETQAI--FPRIFGHE 70
K+ V G + V E + +E+R+K+ + LC SD+ +P GHE
Sbjct: 2 KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHE 60
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCE---VLGLERRGVMHS 126
SG +++VG GV + + G+ V C TC +C + C +G R G
Sbjct: 61 FSGYIDAVGSGVDDLHPGDAV-ACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDG---- 115
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSAGLG 183
F+EY VV + + P+E ++ GL
Sbjct: 116 --------------------GFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL----- 150
Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
A+++A + V+I G GT+GL Q A A GA + +D + EK AK+FG +
Sbjct: 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTF 210
Query: 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK--LK 300
N ++ Q+ + + E G + A++ +G L
Sbjct: 211 NSSE--MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLH 267
Query: 301 PEVAAHYGLFLSGRTLKGSL--FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDIN 358
A + T+ GS + P + + +++ ++ I H FE
Sbjct: 268 LTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFA 327
Query: 359 QAFN-LMKEGKCLRSVIH 375
QA + + + ++
Sbjct: 328 QAVRDIARNAMPGKVLLI 345
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 196 bits (500), Expect = 6e-60
Identities = 81/379 (21%), Positives = 146/379 (38%), Gaps = 53/379 (13%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-----------TQAI 62
+A G+PL ++E+ V P+ ++ IKV +C SD+ +
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 63 FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLE 119
P GHE +G +E VG V +++G+ V C C+ + + C+ LG+
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121
Query: 120 RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179
G +++EY +V + + L+C
Sbjct: 122 FDG------------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTC--- 154
Query: 180 AGLGA--AWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
+G+ A A + T+++ G G +G Q AKA + IIGVD E E AK
Sbjct: 155 SGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214
Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
G +N + + P+ ++ + G D + ++ ++ G V +G+
Sbjct: 215 AGADYVINASMQD-PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGL 272
Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFED 356
A + LS GSL G ++D ++ L + V IT + E+
Sbjct: 273 FGADLHYHA-PLITLSEIQFVGSLVG---NQSDFLGIMR--LAEAGKVKPMITKTMKLEE 326
Query: 357 INQAFNLMKEGKCL-RSVI 374
N+A + ++ K + R V+
Sbjct: 327 ANEAIDNLENFKAIGRQVL 345
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 193 bits (492), Expect = 3e-58
Identities = 81/390 (20%), Positives = 126/390 (32%), Gaps = 69/390 (17%)
Query: 14 KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWETQAI---------- 62
+ W + + VEEV +P EI IKV +C SD+ +T
Sbjct: 32 LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90
Query: 63 FPRIFGHEASGIVESVGPGVTE------FNEGEHVLTVFIGECKTCRQCKSDKSNTCE-- 114
FP GHE SG+V GP F GE V + C CR C N CE
Sbjct: 91 FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENL 150
Query: 115 -VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-------SSIA 166
LG G +F+EY V + A +
Sbjct: 151 NELGFNVDG------------------------AFAEYVKVDAKYAWSLRELEGVYEGDR 186
Query: 167 PLEKICL---LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIG 223
L S +A I G VVI G G +GL+ K GAS++I
Sbjct: 187 LFLAGSLVEPTSVAYNA---VIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVIL 243
Query: 224 VDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 282
+ + + AK G ++P E + + T+G GA E G ++ ++
Sbjct: 244 SEPSEVRRNLAKELGADHVIDP--TKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIE 301
Query: 283 SCCD----GWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL 338
+ K + + + GS G P ++ +
Sbjct: 302 EVIWRARGINATVAIVARADAKIPLTGEV-FQVRRAQIVGSQ--GHSGHGTFPRVI-SLM 357
Query: 339 KKEFMVDEFITHNLLFEDINQAFNLMKEGK 368
+ + I+ + E+I + ++ K
Sbjct: 358 ASGMDMTKIISKTVSMEEIPEYIKRLQTDK 387
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 4e-58
Identities = 82/377 (21%), Positives = 147/377 (38%), Gaps = 51/377 (13%)
Query: 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-----TQAIFPRI 66
KAA+ +PL +E+V + PQ EE+ I++ +CR+D+ W+ P I
Sbjct: 3 KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPII 62
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGV 123
GHE +G + VG + + +G++V+ TCR C+ K N C+ + G G
Sbjct: 63 LGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNG- 120
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC-GLSA-- 180
FSEY +V S + + + L+ G ++
Sbjct: 121 -----------------------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMG 157
Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGV 239
+ A V++ G+G + + Q KA + I+G+ + + + A G
Sbjct: 158 AIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA 217
Query: 240 TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298
D + +I ++TDG GA + + +G + G + +G+
Sbjct: 218 DYVSEMKD----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEG 272
Query: 299 LKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDIN 358
+ + A + + + L GS +G D+ L K + +DIN
Sbjct: 273 KRVSLEA-FDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIK------PYIIKVPLDDIN 325
Query: 359 QAFNLMKEGKCL-RSVI 374
+AF + EG+ R VI
Sbjct: 326 KAFTNLDEGRVDGRQVI 342
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 2e-56
Identities = 81/383 (21%), Positives = 139/383 (36%), Gaps = 58/383 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF------PRIF 67
+ V G G L +E + P P E+ +++ +C SD+ WE I P +
Sbjct: 9 LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKSDKSNTCEVLGLERRGV 123
GHEASG VE VG V G+ V E + CK + N +
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRV----AIEPGAPRENDEFCKMGRYNLSP--SIFFCAT 121
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSA 180
D G + + ++ K+ E+ L LS G+
Sbjct: 122 PPDD--------G----------NLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI-- 161
Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
A ++ G V++ G G +G+ AKA GA++++ D + + KAK G
Sbjct: 162 ---HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD 218
Query: 241 EFLNPNDNNEPVQQVIKRITD---GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
L + E Q++ +++ + + EC G I + + G G V +G+
Sbjct: 219 LVLQISK--ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLG 275
Query: 298 KLKPEVAAHYGLFLSGRTLKGSL--FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFE 355
V + + +KG W + L ++ + V +TH E
Sbjct: 276 SEMTTVPLLH-AAIREVDIKGVFRYCNTWPVAISM--LASKSVN----VKPLVTHRFPLE 328
Query: 356 DINQAFNLMKEGKCLRSVIHMPK 378
+AF K+G L+ ++
Sbjct: 329 KALEAFETFKKGLGLKIMLKCDP 351
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 6e-54
Identities = 78/390 (20%), Positives = 134/390 (34%), Gaps = 59/390 (15%)
Query: 1 MSTSIKQPQ--VITCKAAVAWGAGQPLVVEEVEVNP-PQPEEIRIKVVCTSLCRSDITAW 57
M++S + V T W + +E V+ + E+ + V T +C SD+ W
Sbjct: 1 MASSASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFW 60
Query: 58 ETQAIF------PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKS 107
+ I + GHE++G V +V P V G+ V E C C C +
Sbjct: 61 KHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRV----AIEPQVICNACEPCLT 116
Query: 108 DKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167
+ N CE ++ G Y + K+ ++
Sbjct: 117 GRYNGCE--RVDFLSTPPVP--------G----------LLRRYVNHPAVWCHKIGNM-S 155
Query: 168 LEKICL---LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV 224
E + LS L A A + G V+I G G +GL AKA GA ++
Sbjct: 156 YENGAMLEPLSVAL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVIT 210
Query: 225 DTNPEKCEKAKAFGVTEFLNPNDNN---EPVQQVIKRITDGGADYSFECIGDTGMITTAL 281
D + + + AK + + E +++++ + EC G I A+
Sbjct: 211 DIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAI 270
Query: 282 QSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL--FGGWKPKTDLPSLVNRYLK 339
+ G G +GV K + ++ + L+ W L + N +
Sbjct: 271 WAVKFG-GKVFVIGVGKNEIQIPFMR-ASVREVDLQFQYRYCNTWPRAIRL--VENGLVD 326
Query: 340 KEFMVDEFITHNLLFEDINQAFNLMKEGKC 369
+ +TH ED +AF + K
Sbjct: 327 ----LTRLVTHRFPLEDALKAFETASDPKT 352
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 178 bits (455), Expect = 3e-53
Identities = 84/384 (21%), Positives = 144/384 (37%), Gaps = 57/384 (14%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF------PRIF 67
+AV + L +E+ + P+ +E+ +++ +C SD+ +E I P +
Sbjct: 6 LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 68 GHEASGIVESVGPGVTEFNEGEHVL---TVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
GHEASG V VG V +G+ V V C+ C+ CK K N C L
Sbjct: 65 GHEASGTVVKVGKNVKHLKKGDRVAVEPGVP---CRRCQFCKEGKYNLCP--DLTFCATP 119
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSAG 181
D G + + Y V + K+ LE+ L LS G+
Sbjct: 120 PDD--------G----------NLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV--- 158
Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
A A + G+TV++ G G +GL AKA GA ++ +P + E AK G
Sbjct: 159 --HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADV 215
Query: 242 FLNPNDNNEPVQQVIKRITDG---GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298
L + E +I+RI + + +C G+ IT + G G + +G+
Sbjct: 216 TLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS 274
Query: 299 LKPEVAAHYGLFLSGRTLKGSL-FGG-WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFED 356
V +K + + ++ + V + +TH+ E
Sbjct: 275 QMVTVPLVN-ACAREIDIKSVFRYCNDYPIALEMVA------SGRCNVKQLVTHSFKLEQ 327
Query: 357 INQAFNLMKEGK--CLRSVIHMPK 378
AF ++ ++ +I +
Sbjct: 328 TVDAFEAARKKADNTIKVMISCRQ 351
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 1e-52
Identities = 83/373 (22%), Positives = 140/373 (37%), Gaps = 37/373 (9%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TAWE--TQAIFPRIFGHE 70
K G+ + E E P P + ++ + + C SDI T +E I GHE
Sbjct: 2 KGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHE 60
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
A G V VG V +F G+ V+ I + + +
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGML----AGWKFSNV- 115
Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVH--SGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
G F E+ V+ + PLE ++ ++ G A
Sbjct: 116 ---KDG----------VFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAEL- 161
Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
A+I G TV + G+G VGL GA GA RI V + C+ A +G T+ +N +
Sbjct: 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN- 220
Query: 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA--- 304
+ + I + TDG G D GD A++ G + + +
Sbjct: 221 -GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGN-VNYLGEGDNIDIPR 278
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNL-LFEDINQAFNL 363
+ +G+ + + + G L G + + L++ K + +TH F++I +AF L
Sbjct: 279 SEWGVGMGHKHIHGGLCPG--GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFML 336
Query: 364 MKEGK--CLRSVI 374
MK+ ++ V+
Sbjct: 337 MKDKPKDLIKPVV 349
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 3e-47
Identities = 60/384 (15%), Positives = 119/384 (30%), Gaps = 57/384 (14%)
Query: 14 KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWE--------TQAIFP 64
KA + + V++V+ +I+I+ + +C +D +
Sbjct: 2 KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
+ GHEA G+VE G ++ G+ V+ V C CR C + + CE G+
Sbjct: 62 LVLGHEAIGVVEESYHGFSQ---GDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIH 118
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK----VSSIA----PL---EKICL 173
D G E+ VK + I PL EK
Sbjct: 119 KMD--------G----------FMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIE 160
Query: 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
+ + V++ G G +G+ + G + P + E+
Sbjct: 161 EILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ 220
Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG-DTGMITTALQSCCDGWGLAV 292
N +++ ++ + + G D + G D ++ + G+
Sbjct: 221 TVIEETK--TNYYNSSNGYDKL--KDSVGKFDVIIDATGADVNILGNVIPLLGRN-GVLG 275
Query: 293 TLGVPKLKPEVAAHYG----LFLSGRTLKGSLFGG---WKPKTDLPSLVNRYLKKEFMVD 345
G V Y + + +T+ G + G ++ L +
Sbjct: 276 LFGFST-SGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQAVVH--LASWKTLYPKAAK 332
Query: 346 EFITHNLLFEDINQAFNLMKEGKC 369
IT + D + +++E +
Sbjct: 333 MLITKTVSINDEKELLKVLREKEH 356
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 9e-46
Identities = 84/384 (21%), Positives = 148/384 (38%), Gaps = 58/384 (15%)
Query: 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
T K + + + L +++ V P+ E+ I V + +C +D+ A W P +
Sbjct: 5 TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64
Query: 68 GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHE +G+V +G V + G++ + G C C C+ + C H+
Sbjct: 65 GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCP----------HA 114
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG--A 184
D ++ G SF +Y + A + L ++ + C AG+
Sbjct: 115 DLSG-YTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILC---AGITVYK 160
Query: 185 AWNVADISKGSTVVIFGLGTVGL-SVA-QGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
A A++ G V I G GL S+A Q AKA G R++G+D K E ++ G F
Sbjct: 161 ALKSANLMAGHWVAISGAAG-GLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVF 218
Query: 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
++ + V V+K TDGGA I + + G V +G+P
Sbjct: 219 IDFTKEKDIVGAVLK-ATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAGAKC 276
Query: 303 VAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLL-------FE 355
+ + + ++ GS G D +E +D F +
Sbjct: 277 CSDVFNQVVKSISIVGSYVGNRA---DT---------RE-ALDFFARGLVKSPIKVVGLS 323
Query: 356 DINQAFNLMKEGKCL-RSVIHMPK 378
+ + + M++G+ + R V+ K
Sbjct: 324 TLPEIYEKMEKGQIVGRYVVDTSK 347
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 9e-46
Identities = 68/371 (18%), Positives = 115/371 (30%), Gaps = 54/371 (14%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF------PRIF 67
KA VV E P+ E ++ + +C +D +
Sbjct: 2 KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHV-LTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMH 125
GHEA G+V V P TE EG+ V TV T + D+ +
Sbjct: 62 GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAP----------- 108
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK----VSSIAPLEKICLLSCGLSA- 180
+ +G H SE+ V+ + + L I +S A
Sbjct: 109 ---DGMYFERGIVGAH----GYMSEFFTSPEKYLVRIPRSQAELGFL--IEPISITEKAL 159
Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA--RGASRIIGV---DTNPEKCEKAK 235
A A S+ + G G++GL K +G + + D + +
Sbjct: 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219
Query: 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295
T + E V V D+ +E G ++Q+ G+ LG
Sbjct: 220 ELDATYVDSRQTPVEDVPDVY-----EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLG 273
Query: 296 VPK----LKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLK-KEFMVDEFITH 350
VP A H + L + L GS+ + + K ++ +++ +T
Sbjct: 274 VPSDWAFEVDAGAFHREMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWFLEDLVTG 330
Query: 351 NLLFEDINQAF 361
+ AF
Sbjct: 331 VHPLSEFEAAF 341
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 4e-45
Identities = 97/382 (25%), Positives = 147/382 (38%), Gaps = 58/382 (15%)
Query: 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
KAAV G PL ++EV V P P ++++K+ + +C +D+ A W + P I
Sbjct: 2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIP 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHE G V +VG GV+ EG+ V + C C C CE
Sbjct: 62 GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE-----------K 110
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-- 184
Q T +S+ G + EY V + +I + C AG+
Sbjct: 111 QQNTGYSVNG----------GYGEYVVADPNYVGLLPDKVGFVEIAPILC---AGVTVYK 157
Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
V D G VVI G+G +G Q A+A G R+ VD + K A+ G +N
Sbjct: 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVN 216
Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
D + P + K I GGA + A+ G G G+P
Sbjct: 217 ARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGDFGTP 272
Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLL-------FEDI 357
+ + L G T++GS+ G DL +E +D ++ +D+
Sbjct: 273 I-FDVVLKGITIRGSIVGTRS---DL---------QE-SLDFAAHGDVKATVSTAKLDDV 318
Query: 358 NQAFNLMKEGKCL-RSVIHMPK 378
N F ++EGK R V+ +
Sbjct: 319 NDVFGRLREGKVEGRVVLDFSR 340
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 4e-44
Identities = 96/381 (25%), Positives = 148/381 (38%), Gaps = 60/381 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIFGH 69
KAAV +PL ++EVE E+ +++ +C +D+ A W + P I GH
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 70 EASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
E GIVE VGPGVT G+ V + C C C S + CE +
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCE-----------HQK 110
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN- 187
+S+ G ++EY + VK+ E+ + C AG+ +
Sbjct: 111 NAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFC---AGV-TTYKA 156
Query: 188 --VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
V G V I+G+G +G Q AKA G ++ VD EK E AK G +NP
Sbjct: 157 LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP 215
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
E + +K GG + +A S G G V +G+P + +
Sbjct: 216 LK--EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPI 271
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLL-------FEDIN 358
+ L+G + GS+ G K DL + + + E IN
Sbjct: 272 -FDTVLNGIKIIGSIVGTRK---DL----------QEALQFAAEGKVKTIIEVQPLEKIN 317
Query: 359 QAFNLMKEGKCL-RSVIHMPK 378
+ F+ M +G+ R V+ +
Sbjct: 318 EVFDRMLKGQINGRVVLTLED 338
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 5e-40
Identities = 82/407 (20%), Positives = 138/407 (33%), Gaps = 65/407 (15%)
Query: 14 KAAVAWGAGQPLVVEEVE----VNP--PQPEEIRIKVVCTSLCRSD------ITAWETQA 61
K+ V G L VE V + + +KVV T++C SD
Sbjct: 4 KSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPK-- 60
Query: 62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
+ GHE +G V G V + G+ V F C CR CK +S+ CE +
Sbjct: 61 --GHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPD 118
Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVS-SFSEYTVVH--SGCAVKV----SSIAPLEKICLL 174
+ G + S +EY +V +K ++ ++ + L+
Sbjct: 119 ADL-----------GAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLI 167
Query: 175 SCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234
S L G + A + GS V I G G VG A GA+ GA+ +I D NPE+ +
Sbjct: 168 SDILPTGFHGCVS-AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLL 226
Query: 235 KAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG--------------DTGMITT 279
G ++ + + P++ I +I D + +G G + +
Sbjct: 227 SDAGFET-IDLRN-SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNS 284
Query: 280 ALQSCCDGWGLAVTLGV-----PKLKPEVAAHYGLFLSGRTL--KG-SLFGGWKP-KTDL 330
G + + G+ P + A L L + K + G P
Sbjct: 285 LFDVVRAGGAIGIP-GIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYN 343
Query: 331 PSLVNRYLKKE--FMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375
L L + ++ + + + +G + VI
Sbjct: 344 RHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSPAKFVID 390
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 4e-37
Identities = 81/410 (19%), Positives = 145/410 (35%), Gaps = 71/410 (17%)
Query: 14 KAAVAWGAGQPLVVEEVE----VNP---PQPEEIRIKVVCTSLCRSDITAW----ETQAI 62
+ V G+G+ + V++++ +P + +KVV T++C SD T A
Sbjct: 4 RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQ--HMVRGRTTAQ 60
Query: 63 FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
+ GHE +G V G V G+ V F C CR CK + C + R G
Sbjct: 61 VGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAG 120
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFS----EYTVV---HSGCAVKV----SSIAPLEKI 171
Y Y + ++ EY +V +K+ ++ + +
Sbjct: 121 GA---------------YGYVDMGDWTGGQAEYVLVPYADFNL-LKLPDRDKAMEKIRDL 164
Query: 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC 231
LS L G A A + GSTV + G G VGL+ A A+ GA+ +I D NP +
Sbjct: 165 TCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL 223
Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG---------------DTG 275
AKA G D P+ + I + D + + +G
Sbjct: 224 AHAKAQGFEIADLSLD--TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPAT 281
Query: 276 MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK-GSLF-------GGWKP- 326
++ + +Q + + G+ + A + +++ G + G P
Sbjct: 282 VLNSLMQVTRVAGKIGIP-GLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPV 340
Query: 327 KTDLPSLVNRYLKKEF-MVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 375
+L+ + + + + +D + + G + VI
Sbjct: 341 MKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVPKKFVID 390
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 3e-32
Identities = 81/362 (22%), Positives = 127/362 (35%), Gaps = 67/362 (18%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIFGHEASGIVESVGP 80
L + E V +I ++ + SL D FP + + SG+VE+VG
Sbjct: 41 LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGK 100
Query: 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVY 140
VT F G+ V++ F + + ++ E LG GV
Sbjct: 101 SVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGV----------------- 143
Query: 141 HYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN----VADISKGST 196
SEY V+ G V + L C AGL AW + G
Sbjct: 144 -------LSEYVVLPEGWFVAAPKSLDAAEASTLPC---AGL-TAWFALVEKGHLRAGDR 192
Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256
VV+ G G V L Q AKA GA +I ++ EK ++A A G +N + E + +
Sbjct: 193 VVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLE--EDWVERV 249
Query: 257 KRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGLFLSGR 314
+T GAD+ E G + +L++ G +GV + + L L
Sbjct: 250 YALTGDRGADHILEIAG-GAGLGQSLKAVAPD-GRISVIGVLEGFEVSGPVGP-LLLKSP 306
Query: 315 TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLL---------FEDINQAFNLMK 365
++G G + L LV + L F ++ +A +
Sbjct: 307 VVQGISVG---HRRALEDLV-----------GAVDRLGLKPVIDMRYKFTEVPEALAHLD 352
Query: 366 EG 367
G
Sbjct: 353 RG 354
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 9e-30
Identities = 79/381 (20%), Positives = 140/381 (36%), Gaps = 75/381 (19%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE----TQAIFPRIF 67
+A V G P L V ++ V P P+E+R+++ +L D+ + + P +
Sbjct: 2 RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVM 124
G + SG+V++VGPGV F G+ V+ C C +C + + N C +LG R G
Sbjct: 62 GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT- 120
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
++EY V+ E+ + L
Sbjct: 121 -----------------------YAEYVVLPEANLAPKPKNLSFEEAAAIPL---TFL-T 153
Query: 185 AWN----VADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
AW + G V++ V ++ Q AK GA R+I + +K +AKA G
Sbjct: 154 AWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGA 212
Query: 240 TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG-DTGMITTALQSCCDGWGLAVTLGVP 297
E +N + ++R+T G GAD + G +++ +G G G
Sbjct: 213 DETVNYTH--PDWPKEVRRLTGGKGADKVVDHTGALY--FEGVIKATANG-GRIAIAGAS 267
Query: 298 K-LKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLL--- 353
+ + + +F ++ GS K+ L ++ F+ L
Sbjct: 268 SGYEGTLPFAH-VFYRQLSILGSTMA---SKSRLFPIL-----------RFVEEGKLKPV 312
Query: 354 ------FEDINQAFNLMKEGK 368
E + L++E +
Sbjct: 313 VGQVLPLEAAAEGHRLLEERR 333
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 6e-28
Identities = 70/411 (17%), Positives = 122/411 (29%), Gaps = 84/411 (20%)
Query: 7 QPQVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDI--------- 54
A + P + +++V V P E + V+ +S+ + +
Sbjct: 37 HKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLS 96
Query: 55 -----------TAWETQAIFP-RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTC 102
+ + P + G + +G+V GPGV + G+ V+ +
Sbjct: 97 TFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELES 156
Query: 103 RQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162
+D E I G +E +V S +
Sbjct: 157 SDGHNDTMLDPE-----------------QRIWGFETNF----GGLAEIALVKSNQLMPK 195
Query: 163 SSIAPLEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR 216
E+ A + N A + +G V+I+G G +G Q A A
Sbjct: 196 PDHLSWEEAAAPGL---VNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG 252
Query: 217 GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ---------------QVIKRITD 261
GA I V ++P+K E +A G ++ N + I+ +T
Sbjct: 253 GA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG 311
Query: 262 G-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGLFLSGRTLKGS 319
G D FE G ++ G G T E Y L++S + + GS
Sbjct: 312 GEDIDIVFEHPGR-ETFGASVFVTRKG-GTITTCASTSGYMHEYDNRY-LWMSLKRIIGS 368
Query: 320 LFGGWKPKTDLPSLVNRYLKKEF--MVDEFITHNLLFEDINQAFNLMKEGK 368
F + K + + + ED QA +
Sbjct: 369 HFA---NYREAWEANRLIAKGRIHPTLSKVYS----LEDTGQAAYDVHRNL 412
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 51/409 (12%), Positives = 110/409 (26%), Gaps = 79/409 (19%)
Query: 5 IKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI---------- 54
++ K + L + EV + P+E+ + V+ +S+ + +
Sbjct: 30 LRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPT 89
Query: 55 -----------TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCR 103
+ G + SG+V G GV + G+HV+ V
Sbjct: 90 FHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQE 148
Query: 104 QCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163
G +EY VV + +
Sbjct: 149 PATHGDGMLGT----------------EQRAWGFETNFG----GLAEYGVVRASQLLPKP 188
Query: 164 SIAPLEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARG 217
+ E+ + A + A + +G V+I+G G +G Q K G
Sbjct: 189 AHLTWEEAAVSPL---CAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGG 245
Query: 218 ASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN----------------EPVQQVIKRITD 261
+ V ++ +K +A G +N + + +++
Sbjct: 246 G-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAG 304
Query: 262 GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321
D FE G ++ G + Y L++ + + GS
Sbjct: 305 REPDIVFEHTGR-VTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRY-LWMKLKKIVGSHG 362
Query: 322 GGWKPKTDLPSLVNRYLKKEF--MVDEFITHNLLFEDINQAFNLMKEGK 368
+ + + + + +A +++ +
Sbjct: 363 A---NHEEQQATNRLFESGAVVPAMSAVYP----LAEAAEACRVVQTSR 404
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-25
Identities = 60/387 (15%), Positives = 108/387 (27%), Gaps = 81/387 (20%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF---PRIFGHE 70
A + V +++ ++V ++ SD + F G +
Sbjct: 13 TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAFLGTD 69
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
+G V +VG VT G+ V ++
Sbjct: 70 YAGTVVAVGSDVTHIQVGDRVYG------------------------------AQNEMCP 99
Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK------------ICLLSCGL 178
R +G +FS+YTV K+ E+ + + GL
Sbjct: 100 RTPDQG----------AFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGL 149
Query: 179 SAGLGAAWNVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
+A SK V+++G T Q + G I +P + AK+
Sbjct: 150 PLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKSR 207
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWG-LAVTLGV 296
G E + + Q I+ T Y+ +CI + T + G
Sbjct: 208 GAEEVFDYRA--PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPF 265
Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLL--- 353
P+ + G T+ G P S R ++ +
Sbjct: 266 PEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLW--RIAGQLVEDGR 323
Query: 354 ------------FEDINQAFNLMKEGK 368
F+ I Q L+++G+
Sbjct: 324 LVHHPLRVVQGGFDHIKQGMELVRKGE 350
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-25
Identities = 85/399 (21%), Positives = 143/399 (35%), Gaps = 86/399 (21%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA--- 56
MS S ++ + A L E++R KV+ +C SD+ +
Sbjct: 5 MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64
Query: 57 WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEV 115
W +++P + GHE G V VG V + N G+ V + +G C +C C +D N C
Sbjct: 65 WG-FSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCP- 122
Query: 116 LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--------FSEYTVVHSGCAVKVSSIAP 167
K + Y ++ +S + V + ++ P
Sbjct: 123 ---------------------KMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMP 161
Query: 168 LEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRII 222
L+ L C AG+ + + G + I GLG +G + AKA G+ ++
Sbjct: 162 LDGGAPLLC---AGITVYSPLKYFGLD--EPGKHIGIVGLGGLGHVAVKFAKAFGS-KVT 215
Query: 223 GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMIT 278
+ T+P K E+A K FG FL D + ++ + + I DT
Sbjct: 216 VISTSPSKKEEALKNFGADSFLVSRDQEQ-----MQAAAG-----TLDGIIDTVSAVHPL 265
Query: 279 TALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL 338
L G + +G P+ E+ A + L + + GS GG
Sbjct: 266 LPLFGLLKSHGKLILVGAPEKPLELPA-FSLIAGRKIVAGSGIGG--------------- 309
Query: 339 KKEF--MVDEFITHNLL-------FEDINQAFNLMKEGK 368
KE M+D HN+ + +N A + +
Sbjct: 310 MKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKND 348
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 4e-25
Identities = 87/396 (21%), Positives = 150/396 (37%), Gaps = 81/396 (20%)
Query: 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET-- 59
STS+ + + KA A+ A QPL ++ P P +++I++ +C SD+ +
Sbjct: 12 STSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW 71
Query: 60 -QAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLG 117
++P + GHE G V +VG V ++ G+ V + + CK C +C+ N C+
Sbjct: 72 AGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCD--- 128
Query: 118 LERRGVMHSDQQTRFSIKGKPVYHYCAVSS---------FSEYTVVHSGCAVKV-SSIAP 167
Y + + +S+ VVH +++
Sbjct: 129 -------------------HMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQ 169
Query: 168 LEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRII 222
L + L C AG+ W G V + G+G +G + A A GA ++
Sbjct: 170 LAAVAPLLC---AGITTYSPLRHWQA---GPGKKVGVVGIGGLGHMGIKLAHAMGA-HVV 222
Query: 223 GVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITT 279
T+ K E AKA G E +N + +E + SF+ I +T
Sbjct: 223 AFTTSEAKREAAKALGADEVVNSRNADE-----MAAHLK-----SFDFILNTVAAPHNLD 272
Query: 280 ALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLK 339
+ G +G P + + L + R + GS+ GG P+T
Sbjct: 273 DFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG-IPET----------- 320
Query: 340 KEFMVDEFITHNLL-------FEDINQAFNLMKEGK 368
+E M+D H ++ + IN+A+ M G
Sbjct: 321 QE-MLDFCAEHGIVADIEMIRADQINEAYERMLRGD 355
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348 | Back alignment and structure |
|---|
Score = 98.0 bits (245), Expect = 3e-23
Identities = 89/384 (23%), Positives = 141/384 (36%), Gaps = 78/384 (20%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA---WETQAIFPRI 66
+ K + + + + P ++ I ++ +C SDI +A W+ + I+P I
Sbjct: 3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWK-EGIYPMI 61
Query: 67 FGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
GHE +GI++ VG GV +F G+ V + F+ CK C+ CK + C
Sbjct: 62 PGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT----------- 110
Query: 126 SDQQTRFSIKGKPVYHYCAVSS--FSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
+ F+ +H +S VV + V APLEK+ L C AG+
Sbjct: 111 ---KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLC---AGIT 164
Query: 184 A-----AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
V +KG+ V + G G +G + A A GA + N K + A + G
Sbjct: 165 TYSPLKFSKV---TKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMG 220
Query: 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITTALQSCCDGWGLAVTLG 295
V F + I T G +G
Sbjct: 221 VKHFY---------------TDPKQCKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVG 265
Query: 296 VPK--LKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEF--MVDEFITHN 351
+P + P ++ + L R + GSL GG KE MVD I HN
Sbjct: 266 LPPVEVAPVLSVFDFIHLGNRKVYGSLIGG---------------IKETQEMVDFSIKHN 310
Query: 352 LL-------FEDINQAFNLMKEGK 368
+ +DI+ A++ + GK
Sbjct: 311 IYPEIDLILGKDIDTAYHNLTHGK 334
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 9e-23
Identities = 65/381 (17%), Positives = 113/381 (29%), Gaps = 86/381 (22%)
Query: 14 KAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFP 64
+A V G P + ++ +E+ + ++R+K++ + SDI Q P
Sbjct: 28 RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDI--NMIQGNYGLLPELP 85
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
+ G+E V +VG VT G+ V+ G LG
Sbjct: 86 AVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG------------------LG------- 120
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
++ V ++V S PL+ + L
Sbjct: 121 ----------------------TWRTEAVFSEEALIQVPSDIPLQS----AATLGVNPCT 154
Query: 185 AWN----VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AK 235
A+ + G +V+ VG +V Q A A G R I V + +K K
Sbjct: 155 AYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLK 213
Query: 236 AFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTL 294
+ G + + ++ D + C+G G +T L G VT
Sbjct: 214 SLGAEHVITEEE--LRRPEMKNFFKDMPQPRLALNCVG--GKSSTELLRQLARGGTMVTY 269
Query: 295 GVP-KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEF-MVDE-----F 347
G K + +F L+G WK P + ++
Sbjct: 270 GGMAKQPVVASVSLLIF-KDLKLRGFWLSQWKKDHS-PDQFKELILTLCDLIRRGQLTAP 327
Query: 348 ITHNLLFEDINQAFNLMKEGK 368
+ +D A +
Sbjct: 328 ACSQVPLQDYQSALEASMKPF 348
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 1e-22
Identities = 77/386 (19%), Positives = 136/386 (35%), Gaps = 82/386 (21%)
Query: 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA---WETQAIFPRIF 67
A L + PE++ I+++C +C +D+ + +P +
Sbjct: 9 KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLG-MSNYPMVP 67
Query: 68 GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHE G V VG V++F G+ V + +G C C C+ D C
Sbjct: 68 GHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCP------------ 115
Query: 127 DQQTRFSIKGKPVYHYCAVSS--------FSEYTVVHSGCAVKVSSIAPLEKICLLSCGL 178
K ++ Y V F++ TVVH VK+ +E+ L C
Sbjct: 116 ----------KKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC-- 163
Query: 179 SAGLGA-----AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
AG+ + + G I GLG VG + AKA G + + ++ +K E+
Sbjct: 164 -AGVTVYSPLSHFGLK--QPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREE 219
Query: 234 A-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITTALQSCCDGWG 289
A + G +++ +D + + + D S + + DT S G
Sbjct: 220 ALQDLGADDYVIGSDQAK-----MSELAD-----SLDYVIDTVPVHHALEPYLSLLKLDG 269
Query: 290 LAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFIT 349
+ +GV + L L + + GS G +T +E M++
Sbjct: 270 KLILMGVINNPLQFLT-PLLMLGRKVITGSFIGS-MKET-----------EE-MLEFCKE 315
Query: 350 HNLL-------FEDINQAFNLMKEGK 368
L + +N AF +++
Sbjct: 316 KGLSSIIEVVKMDYVNTAFERLEKND 341
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 2e-22
Identities = 58/356 (16%), Positives = 101/356 (28%), Gaps = 93/356 (26%)
Query: 10 VITCKAAVAWGAGQP---LVVEEVEVNPPQPE--EIRIKVVCTSLCRSDI---------- 54
+IT +A + G+P L + E++ E+ +K + + + SDI
Sbjct: 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60
Query: 55 ---TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSN 111
T G+E V VG V+ G+ V+ +
Sbjct: 61 PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG------------ 108
Query: 112 TCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171
++ + + + +K+ + A +
Sbjct: 109 -----------------------------------TWRTHALGNDDDFIKLPNPAQSKAN 133
Query: 172 CLLSCGLSAGLGAAWNV------------ADISKGSTVVIF--GLGTVGLSVAQGAKARG 217
+ GL+ GA +V ++ G I G VG +Q K
Sbjct: 134 GKPN-GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN 192
Query: 218 ASRIIGV----DTNPEKCEKAKAFGVTEFLNPNDNNEP-VQQVIKRITD---GGADYSFE 269
I V E K G T+ + + NN IK G A +
Sbjct: 193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALN 251
Query: 270 CIGDTGMITTALQSCCDGWGLAVTLGVP-KLKPEVAAHYGLFLSGRTLKGSLFGGW 324
C+G G +T + + GL +T G + +F T G
Sbjct: 252 CVG--GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIF-KNFTSAGFWVTEL 304
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 3e-22
Identities = 76/337 (22%), Positives = 120/337 (35%), Gaps = 85/337 (25%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSL------CRS 52
M +I + K + G + E+ V EE+ IK T + R
Sbjct: 1 MKCTIPE----QQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRK 56
Query: 53 DITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 112
I E P + G EASG V + G GVT F G+ V
Sbjct: 57 GIYPCE----KPYVLGREASGTVVAKGKGVTNFEVGDQVA-------------------- 92
Query: 113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAVKVSSIAPLEKI 171
Y + S+F++Y+ + S G +K+ E++
Sbjct: 93 -----------------------------YISNSTFAQYSKISSQGPVMKLPKGTSDEEL 123
Query: 172 CLLSCGLSAGLGA---AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227
L + GL L A + KG V++F G VGL + Q K +GA I V +
Sbjct: 124 KLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVAST 182
Query: 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQS--C 284
EK + AK +G +N + + + + + + T+G G D SF+ +G T S
Sbjct: 183 DEKLKIAKEYGAEYLINASKED--ILRQVLKFTNGKGVDASFDSVGK----DTFEISLAA 236
Query: 285 CDGWGLAVTLG-----VPKLKPEVAAHYGLFLSGRTL 316
G+ V+ G +P + + L L
Sbjct: 237 LKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQL 273
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 3e-22
Identities = 65/275 (23%), Positives = 104/275 (37%), Gaps = 65/275 (23%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPR 65
AAV G P V EEV+V P P ++R++ + R+ I P
Sbjct: 3 MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
+ G EA+ +VE VGPGVT+F GE V
Sbjct: 63 VVGFEAAAVVEEVGPGVTDFTVGERV---------------------------------- 88
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
+ ++S+ + + +KV L+ + L L G+ A
Sbjct: 89 -------------CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLK-GMTAQ 134
Query: 186 WNVAD---ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
+ + + G V+I G +G + A+ GA +IG + EK E A+ G
Sbjct: 135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHH 193
Query: 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIG-DT 274
+N + + +V++ IT G G D ++ IG DT
Sbjct: 194 TINYSTQD--FAEVVREITGGKGVDVVYDSIGKDT 226
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 8e-22
Identities = 63/322 (19%), Positives = 104/322 (32%), Gaps = 77/322 (23%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPR 65
G P L E P EI+++ + RS + + P
Sbjct: 3 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPS---LPS 59
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
G EA+GIV VG GV G+ V
Sbjct: 60 GLGTEAAGIVSKVGSGVKHIKAGDRV---------------------------------- 85
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGA 184
VY A+ ++S + + A + ++I+ + GL+
Sbjct: 86 -------------VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTV-YYL 131
Query: 185 AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
+I + G VGL Q AKA GA ++IG +K + A G + +
Sbjct: 132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVI 190
Query: 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQS--CCDGWGLAVTLG----- 295
N E + + +K IT G ++ +G T +S C GL V+ G
Sbjct: 191 --NYREEDLVERLKEITGGKKVRVVYDSVGR----DTWERSLDCLQRRGLMVSFGNSSGA 244
Query: 296 VPKLKPEV-AAHYGLFLSGRTL 316
V + + L+++ +L
Sbjct: 245 VTGVNLGILNQKGSLYVTRPSL 266
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 1e-21
Identities = 51/269 (18%), Positives = 94/269 (34%), Gaps = 62/269 (23%)
Query: 14 KAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRI 66
K G P L VE + P + E+ ++++ + SD+ A+ + P I
Sbjct: 6 KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNI 65
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
G+E GIVE+VG V+ G+ V L L G
Sbjct: 66 PGYEGVGIVENVGAFVSRELIGKRV------------------------LPLRGEG---- 97
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAA 185
++ EY + V + SI + L+A
Sbjct: 98 --------------------TWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTA-WVTC 136
Query: 186 WNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
++ + +++ +G AQ ++ R+I V N + E+ G ++
Sbjct: 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVID 195
Query: 245 PNDNNEPVQQVIKRITDG-GADYSFECIG 272
+ P+ + + +T+G GAD + + IG
Sbjct: 196 TST--APLYETVMELTNGIGADAAIDSIG 222
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 2e-21
Identities = 65/348 (18%), Positives = 106/348 (30%), Gaps = 70/348 (20%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA--- 56
MS P+ A + + + + P +I IK+ +C SDI A
Sbjct: 1 MSY----PEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGH 56
Query: 57 WETQAIFPRIFGHEASGIVESVGPGV-TEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCE 114
W P + GHE G V +GP + G+ V + + C C +CK+D C
Sbjct: 57 WG-NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT 115
Query: 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--------FSEYTVVHSGCAVKVSSIA 166
K V Y ++ Y VH V +
Sbjct: 116 ----------------------KFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENI 153
Query: 167 PLEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGLGTVG-LSVAQGAKARGASR 220
P L C GL G V I GLG +G + +KA GA
Sbjct: 154 PSHLAAPLLC---GGLTVYSPLVRNGC---GPGKKVGIVGLGGIGSMGT-LISKAMGA-E 205
Query: 221 IIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT-----G 275
+ + K E A G ++ + + + +F+ I
Sbjct: 206 TYVISRSSRKREDAMKMGADHYIATLEEGDWGE---------KYFDTFDLIVVCASSLTD 256
Query: 276 MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323
+ + G V++ +P+ ++ L ++ S G
Sbjct: 257 IDFNIMPKAMKVGGRIVSISIPEQHEMLSL-KPYGLKAVSISYSALGS 303
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 3e-21
Identities = 61/273 (22%), Positives = 98/273 (35%), Gaps = 66/273 (24%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPR 65
K G P L + E P P+ + ++ L RS + P
Sbjct: 3 KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPF---LPS 59
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
G E +G+VE+VG VT F G+ V
Sbjct: 60 GLGAEGAGVVEAVGDEVTRFKVGDRV---------------------------------- 85
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGA 184
Y + ++SE V+ VK+ S++ + L+ GL+
Sbjct: 86 -------------AYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTV-QYL 131
Query: 185 AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
+ G ++ G VG Q AKA GA ++IG ++PEK AKA G E +
Sbjct: 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETI 190
Query: 244 NPNDNNEPVQQVIKRITDG-GADYSFECIG-DT 274
+ ++E V + + +TDG ++ +G DT
Sbjct: 191 --DYSHEDVAKRVLELTDGKKCPVVYDGVGQDT 221
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 6e-20
Identities = 43/311 (13%), Positives = 78/311 (25%), Gaps = 65/311 (20%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIFGHEASGIVESVGP 80
L + V P P ++ IKV S+ SD+ + + R G E G + + G
Sbjct: 37 LEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGD 96
Query: 81 GV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV 139
+ G+ V GL G
Sbjct: 97 EPYAKSLVGKRV---------------------AFATGLSNWG----------------- 118
Query: 140 YHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV---ADISKGST 196
S++EY V + + + E + A +
Sbjct: 119 -------SWAEYAVAEAAACIPLLDTVRDED----GAAMIVNPLTAIAMFDIVKQEGEKA 167
Query: 197 VVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQV 255
V+ + + AK G R I E+ K G LN +
Sbjct: 168 FVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKA--PDFEAT 224
Query: 256 IKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSG 313
++ + + + + + + + G V G L
Sbjct: 225 LREVMKAEQPRIFLDAVTGP-LASAIFNAMPKR-ARWIIYGRLDPDATVIREPGQLIFQH 282
Query: 314 RTLKGSLFGGW 324
+ ++G W
Sbjct: 283 KHIEGFWLSEW 293
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 2e-18
Identities = 60/394 (15%), Positives = 109/394 (27%), Gaps = 104/394 (26%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE----TQAIFPRIF 67
+A V G G L + + PQ E++I+V L D+ + P +
Sbjct: 5 RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVP 64
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
G E SGIVE++G V + G+ V+
Sbjct: 65 GFECSGIVEALGDSVKGYEIGD------------------------RVMAFVNYN----- 95
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA-- 185
+++E K+ +S AA
Sbjct: 96 -------------------AWAEVVCTPVEFVYKIPD------------DMSFSEAAAFP 124
Query: 186 ------WN----VADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234
+ VA++ +G +V++ G VG +VAQ + G + K E
Sbjct: 125 MNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHEAI 183
Query: 235 KAFGVTEFLNPNDNNEPVQQVIKRITDGGAD---------Y---SFECIGDTG-MITTAL 281
K + D N Q +KRI+ G D + G I
Sbjct: 184 KDSVT----HLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGS 239
Query: 282 QSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR-TLKGSLFGGWKPKTDLPSLVNRYLKK 340
+ G + + + G K L+ ++K
Sbjct: 240 SNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEK 299
Query: 341 EF-MVDE-----FITHNLLFEDINQAFNLMKEGK 368
+ ++ + E++ +A + +
Sbjct: 300 LIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRG 333
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 1e-17
Identities = 66/384 (17%), Positives = 122/384 (31%), Gaps = 86/384 (22%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----A 56
+ +++ + + + V P ++ ++ + SDI
Sbjct: 20 FQSMMQK---LVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGR 76
Query: 57 WETQAIFPRIFGHEASGIVESVGPGVTE-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEV 115
++ P G E G V ++G + + G+ V + G
Sbjct: 77 YDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPG------------------ 118
Query: 116 LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLS 175
SF+EYTVV + A V S+ P E + LL
Sbjct: 119 -------------------------------SFAEYTVVPASIATPVPSVKP-EYLTLLV 146
Query: 176 CGLSA--GLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
G +A L + +S+G V++ G G Q +K +IG ++ EK
Sbjct: 147 SGTTAYISLK---ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSA 202
Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAV 292
K+ G + N EPV V+K+ G D +E +G M A+ + G +
Sbjct: 203 FLKSLGCDRPI--NYKTEPVGTVLKQEYPEGVDVVYESVGGA-MFDLAVDALATK-GRLI 258
Query: 293 TLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNL 352
+G F+SG L L + F ++ +++
Sbjct: 259 VIG--------------FISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQ 304
Query: 353 LFEDINQAFNLMKEGKCLRSVIHM 376
++ + G L + +
Sbjct: 305 --AAMSHLLEMCVSGD-LVCEVDL 325
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 6e-17
Identities = 65/373 (17%), Positives = 113/373 (30%), Gaps = 80/373 (21%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIF 67
KA A P LV +VE P + + V +C D ++ + P +
Sbjct: 23 KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVP 82
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
G E +G+V S G + G+ V+ G
Sbjct: 83 GIETAGVVRSAPEG-SGIKPGD------------------------RVMAFNFIG----- 112
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW- 186
++E V + + + L A +
Sbjct: 113 -------------------GYAERVAVAPSNILPTPPQLDDAE----AVALIANYHTMYF 149
Query: 187 ---NVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
+ G TV++ G G +G + Q AK GA ++I V E K+ G
Sbjct: 150 AYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIV 208
Query: 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LK 300
L E + ++ T G G D + IG A+++ G + +G
Sbjct: 209 LP---LEEGWAKAVREATGGAGVDMVVDPIGGP-AFDDAVRTLASE-GRLLVVGFAAGGI 263
Query: 301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEF-MVDE----FITHNLLFE 355
P + + L L +L G +G + + +V E ++ +
Sbjct: 264 PTIKVNR-LLLRNASLIGVAWGEFLRTH--ADYLYETQAGLEKLVAEGMRPPVSARIPLS 320
Query: 356 DINQAFNLMKEGK 368
+ QA +GK
Sbjct: 321 EGRQALQDFADGK 333
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 79.1 bits (196), Expect = 1e-16
Identities = 50/310 (16%), Positives = 91/310 (29%), Gaps = 100/310 (32%)
Query: 1 MSTSIKQPQVITCKAAVAWGAGQP--LVVE-EVEVNPPQPEEIRIKVVCTSLCRSDIT-- 55
M+T K + + G P L + ++ V P+ ++ IKV + +
Sbjct: 23 MATGQKLMRAVRVFEF-----GGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIR 77
Query: 56 --AWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC 113
+ + + P G + +G++E+VG + F +G+ V T
Sbjct: 78 SGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFT-------------------- 117
Query: 114 EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 173
G ++EY + K+
Sbjct: 118 ---SSTISG------------------------GYAEYALAADHTVYKLPE--------- 141
Query: 174 LSCGLSAGLGAA--------W-NV---ADISKGSTVVIFG-LGTVGLSVAQGAKARGASR 220
L GAA + + A + G +V++ G G VGL+ Q A+A G +
Sbjct: 142 ---KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-K 197
Query: 221 IIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG----------GADY---S 267
I+G E + G E N + IK+
Sbjct: 198 ILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVGEKGIDIIIEMLANVNLSKD 255
Query: 268 FECIGDTGMI 277
+ G +
Sbjct: 256 LSLLSHGGRV 265
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 78.4 bits (194), Expect = 2e-16
Identities = 57/308 (18%), Positives = 98/308 (31%), Gaps = 79/308 (25%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDI--------TAWETQAIF 63
KA G P L + + + ++ IKV SL D A + +
Sbjct: 8 KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
P G++ SG V +G V N G+ +V+G+
Sbjct: 68 PSGLGYDFSGEVIELGSDVNNVNIGD------------------------KVMGI----- 98
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGL 182
F ++EY K+ ++ L+ + L
Sbjct: 99 ------AGFPDHP---------CCYAEYVCASPDTIIQKLEKLSFLQ-----AASLPTAG 138
Query: 183 GAAWNV---ADISKGSTVVIFG-LGTVGLSVA-QGAKARGASRIIGVDTNPEKCEKAKAF 237
A A++ +G V+I G VG +A Q AK +G +I + KA
Sbjct: 139 LTALQALNQAEVKQGDVVLIHAGAGGVG-HLAIQLAKQKGT-TVITT-ASKRNHAFLKAL 195
Query: 238 GVTEFLNPNDNNEPVQQVIKRITD------GGA--DYSFECIGDTG-MITTALQSCCDGW 288
G + +N ++ E I D GG S +C+ +TG +++ +
Sbjct: 196 GAEQCINYHE--EDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITAGRVI 253
Query: 289 GLAVTLGV 296
+A
Sbjct: 254 EVAKQKHR 261
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 47/386 (12%), Positives = 102/386 (26%), Gaps = 113/386 (29%)
Query: 14 KAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSL-------CRSDITAWETQAIF 63
+ W + + V++ ++I ++ + +++ W
Sbjct: 3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWS----N 58
Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEV---LGLER 120
+ G + +G++ VG V G V L+R
Sbjct: 59 GHVPGVDGAGVIVKVGAKVDSKMLGR------------------------RVAYHTSLKR 94
Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSI-------APLEKIC 172
G SF+E+TV+++ + + ++ P
Sbjct: 95 HG------------------------SFAEFTVLNTDRVMTLPDNLSFERAAALPC---- 126
Query: 173 LLSCGLSAGLGAAW---NVADISKGSTVVIFGLGTVGLSVA-QGAKARGASRIIGVDTNP 228
L AW ++K V+I G G V ++ Q G + V +
Sbjct: 127 -------PLL-TAWQAFEKIPLTKQREVLIVGFGAVN-NLLTQMLNNAGY-VVDLV-SAS 175
Query: 229 EKCEKAKAFGVTEFLN-PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDG 287
A GV P+ + + + A + G I C
Sbjct: 176 LSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKANGHII-----CIQD 230
Query: 288 WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDE- 346
+ +++ + L G +L+ ++ +
Sbjct: 231 RI---PAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLT-------LIAQG 280
Query: 347 ----FITHNLLFEDINQAFNLMKEGK 368
FE + +A + ++ K
Sbjct: 281 KMEIAAPDIFRFEQMIEALDHSEQTK 306
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 2e-14
Identities = 58/281 (20%), Positives = 90/281 (32%), Gaps = 86/281 (30%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI------TAWETQAIFPRIF 67
AAV A P V+ ++ P P ++ +++ + D Q P I
Sbjct: 9 IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQP-LPAIL 67
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
G + +G V +VGP V F G+ V GL
Sbjct: 68 GMDLAGTVVAVGPEVDSFRVGD------------------------AVFGLTGGV----- 98
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS----AGL- 182
++G + +++ V + P L+ + L
Sbjct: 99 ----GGLQG----------THAQFAAVDARLLASK----PA--------ALTMRQASVLP 132
Query: 183 ---GAAW----NVADISKGSTVVIFGLGT--VGLSVA-QGAKARGASRIIGVDTNPEKCE 232
AW + A + G TV+I G G VG VA Q A ARGA R+ E
Sbjct: 133 LVFITAWEGLVDRAQVQDGQTVLIQG-GGGGVG-HVAIQIALARGA-RVFAT-ARGSDLE 188
Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
+ G T D + + T G G D ++ +G
Sbjct: 189 YVRDLGATPI----DASREPEDYAAEHTAGQGFDLVYDTLG 225
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 2e-14
Identities = 58/281 (20%), Positives = 94/281 (33%), Gaps = 88/281 (31%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPR 65
+ G P +V+ + + E+ ++ + R DI + A
Sbjct: 30 RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDA--SP 87
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I G E SG + VGPGV+ + G+ +V GL G
Sbjct: 88 ILGLELSGEIVGVGPGVSGYAVGD------------------------KVCGLANGG--- 120
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
+++EY ++ +G + G A AA
Sbjct: 121 ---------------------AYAEYCLLPAGQILPFPK------------GYDAVKAAA 147
Query: 186 --------WN----VADISKGSTVVIFGLGT--VGLSVAQGAKARGASRIIGVDTNPEKC 231
W +A +++G +V+I G GT +G + Q A+A GA + + KC
Sbjct: 148 LPETFFTVWANLFQMAGLTEGESVLIHG-GTSGIGTTAIQLARAFGA-EVYATAGSTGKC 205
Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272
E + G +N E VIK T G D + IG
Sbjct: 206 EACERLGAKRGINYRS--EDFAAVIKAETGQGVDIILDMIG 244
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 72.7 bits (178), Expect = 3e-14
Identities = 50/402 (12%), Positives = 103/402 (25%), Gaps = 117/402 (29%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDI------------------------------ 54
L ++ ++ P P+E+ I++ + L SD+
Sbjct: 20 LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79
Query: 55 --TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 112
+ + G+E +G+V G + G
Sbjct: 80 AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG--------------- 124
Query: 113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKI 171
+ +S+Y + + + + P +
Sbjct: 125 ---------------------------------AMYSQYRCIPADQCLVLPEGATPADGA 151
Query: 172 CLLSCGLSAGLGAAWNVADISK---GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227
L+A + + + S +V +G + Q G +++ +
Sbjct: 152 SSFVNPLTA-----LGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRK 205
Query: 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD---TGMITTALQS 283
E+ + KA G N Q + GA +F+ G G I T +++
Sbjct: 206 QEQADLLKAQGAVHVCNAAS--PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEA 263
Query: 284 CCDGWGLAVTLGVPKLKPEVAAHYG-----------LFLSGRTLKGSLFGGWKPKTD--- 329
+ + +V YG F + G L + K
Sbjct: 264 ALNKSAREYSRYGSTTHKQVYL-YGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGRER 322
Query: 330 ---LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK 368
L V LK F + + ++ + K
Sbjct: 323 ANALKQRVVAELKTTFASH--YSKEISLAEVLDLDMIAVYNK 362
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-12
Identities = 56/283 (19%), Positives = 88/283 (31%), Gaps = 90/283 (31%)
Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPR 65
A G P L V+EV P E+ +KV ++L R+D+ + A
Sbjct: 24 LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA--SN 81
Query: 66 IFGHEASGIVESVGPGV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
I G EASG V +GPG + G+ + L G
Sbjct: 82 ILGLEASGHVAELGPGCQGHWKIGD------------------------TAMALLPGG-- 115
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
++Y V G + + GL+ A
Sbjct: 116 ----------------------GQAQYVTVPEGLLMPIPE------------GLTLTQAA 141
Query: 185 A--------WN----VADISKGSTVVIFGLGT--VGLSVAQGAKARGASRIIGVDTNPEK 230
A + V ++ G V+I G VG + Q + GA + + +K
Sbjct: 142 AIPEAWLTAFQLLHLVGNVQAGDYVLIHA-GLSGVGTAAIQLTRMAGA-IPLVTAGSQKK 199
Query: 231 CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
+ A+ G N E + + T G G + +CIG
Sbjct: 200 LQMAEKLGAAAGFNYKK--EDFSEATLKFTKGAGVNLILDCIG 240
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 3e-11
Identities = 49/273 (17%), Positives = 88/273 (32%), Gaps = 65/273 (23%)
Query: 23 QPLVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPRIFGHEASGIVE 76
L+ E+ P +I ++V S+ R T ++ G++A+GIV
Sbjct: 38 ASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTD---WKVIGYDAAGIVS 94
Query: 77 SVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKG 136
+VGP VT F G+ V + R G
Sbjct: 95 AVGPDVTLFRPGDEVFY---------------------AGSIIRPG-------------- 119
Query: 137 KPVYHYCAVSSFSEYTVVHSGC-AVKVSSIAPLEKICLLSCGLSA--GLGAAWNV--ADI 191
+ +E+ +V K ++ E L ++A +V
Sbjct: 120 ----------TNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVP 169
Query: 192 SKGSTV-VIFGLGTVGLSVA-QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
+ ++ G G VG S+A Q A+ R +I + PE E K+ G + D++
Sbjct: 170 GAAPAILIVGGAGGVG-SIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVI---DHS 225
Query: 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQ 282
+P+ + + G + F
Sbjct: 226 KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIAD 258
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 1e-10
Identities = 57/314 (18%), Positives = 95/314 (30%), Gaps = 84/314 (26%)
Query: 14 KAAVAWGAGQPLV---VEEVEV-NPPQPEEIRIKVVCTSL------------------CR 51
A V G+ V + + + P E+ +KV S+ R
Sbjct: 23 MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82
Query: 52 SDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSN 111
+ FP G + SG+V G V F G+ V
Sbjct: 83 DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWA------------------ 124
Query: 112 TCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC-AVKVSSIAPLEK 170
+ ++G + SE+ VV + K S+ +
Sbjct: 125 ---AVPPWKQG------------------------TLSEFVVVSGNEVSHKPKSLTHTQA 157
Query: 171 ICLLSCGLSAGLGAAWNVADI----SKGSTVVIFG-LGTVGLSVA-QGAKARGASRIIGV 224
L L+A A V + G V+I G G VG + A Q KA A + V
Sbjct: 158 ASLPYVALTA-WSAINKVGGLNDKNCTGKRVLILGASGGVG-TFAIQVMKAWDA-HVTAV 214
Query: 225 DTNPEKCEKAKAFGVTEFLNPND-NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQS 283
+ + E + G + + D + V++ +K + D+ + +G +
Sbjct: 215 -CSQDASELVRKLGADDVI---DYKSGSVEEQLKSL--KPFDFILDNVGGSTETWAPDFL 268
Query: 284 CCDGWGLAVTLGVP 297
VTL P
Sbjct: 269 KKWSGATYVTLVTP 282
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 9e-09
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFP 64
I + G +++ P+ EI +K+ S+ R + + P
Sbjct: 6 IGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRL-MDVSK----AP 60
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHV 91
R+ G +A G+VESVG VT FN+G+ V
Sbjct: 61 RVLGFDAIGVVESVGNEVTMFNQGDIV 87
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 3e-08
Identities = 45/265 (16%), Positives = 79/265 (29%), Gaps = 40/265 (15%)
Query: 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLL 174
+ G+E GV ++G+ +E V G + + E+
Sbjct: 58 IPGMEVVGV----------VEGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEE---- 103
Query: 175 SCGLSAGLGAAWNV---ADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEK 230
+ A+ A G V++ G +G + Q A+A G R++ + PEK
Sbjct: 104 AAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEK 162
Query: 231 CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWG 289
A G E + V +R G D E G + +L G G
Sbjct: 163 LALPLALGAEEAATYAE-------VPERAKAWGGLDLVLEVRGKE--VEESLGLLAHG-G 212
Query: 290 LAVTLGVPK-LKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEF-----M 343
V +G + + L + G + +LV L
Sbjct: 213 RLVYIGAAEGEVAPIPPLR-LMRRNLAVLGFWLTPLLRE---GALVEEALGFLLPRLGRE 268
Query: 344 VDEFITHNLLFEDINQAFNLMKEGK 368
+ + F + AF + +
Sbjct: 269 LRPVVGPVFPFAEAEAAFRALLDRG 293
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 5e-04
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIFGH 69
KA V G PL + ++ + E+ ++V L +D A+ T+ P I G
Sbjct: 2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGM 61
Query: 70 EASGIVE 76
E G+VE
Sbjct: 62 EVVGVVE 68
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 34/230 (14%), Positives = 64/230 (27%), Gaps = 79/230 (34%)
Query: 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTE 84
LV E P E+RI + + D G E +G+V GPGVT
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGVASLGSEGAGVVVETGPGVTG 285
Query: 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCA 144
G+ V+ +
Sbjct: 286 LAPGDRVMGMIPK----------------------------------------------- 298
Query: 145 VSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS----AGLGAAW--------NVADIS 192
+F V ++ + G S A + + ++A +
Sbjct: 299 --AFGPLAVADHRMVTRIPA------------GWSFARAASVPIVFLTAYYALVDLAGLR 344
Query: 193 KGSTVVI-FGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
G ++++ G VG++ Q A+ GA + + + +A ++
Sbjct: 345 PGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASEDKW----QAVELSR 389
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A Length = 290 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
T+ I GLG +G S+A G K +I+G + + + A G+
Sbjct: 8 TIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI 52
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 46.1 bits (109), Expect = 7e-06
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
G+ V + GLG VG+SVA+ A GA ++ + + G+
Sbjct: 155 GANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGME 200
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Length = 279 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 9e-06
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
+ + GLG +G S+A + RG +IGV CEKA +
Sbjct: 3 IGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQL 44
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Length = 183 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 1e-05
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
V+I G+G +G +AR +G++ E ++ ++ G
Sbjct: 42 VLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR 84
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Length = 314 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
V+I G+G +G S A+ + G +I G D NPE KA G+
Sbjct: 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI 79
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Length = 281 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
V+I G+G +G S A+ + G +I G D NPE KA G+
Sbjct: 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI 47
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} Length = 341 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
V I GLG +G S+ + A + G + + + A G
Sbjct: 10 PVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGF 52
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 22/143 (15%)
Query: 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-------AW----NVADISKGSTVV 198
+ + K+ + P + LS LG A+ V + G TV+
Sbjct: 97 THFISDGKGLEKLLTEWPDK------LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVL 150
Query: 199 IFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIK 257
+ G VG V Q AK +G +++G + EK K G N N +++ +K
Sbjct: 151 VSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVN-SLEEALK 208
Query: 258 RITDGGADYSFECIGDTGMITTA 280
+ + G D F+ +G G
Sbjct: 209 KASPDGYDCYFDNVG--GEFLNT 229
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 7e-05
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
T++ FG G +++ +G RIIG NP++ E +A G L P +
Sbjct: 7 TLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEEPS 60
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 9e-05
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
K + GLG G S+ + G ++ VD N EK ++
Sbjct: 5 KNKQFAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYA 49
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 1e-04
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
G TV++ GLG VG S+A A GA +++ DT+ E+ A A G T
Sbjct: 174 DGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT 220
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 32/146 (21%), Positives = 50/146 (34%), Gaps = 26/146 (17%)
Query: 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-------AW----NVADISKGS--T 196
++ KV LS LGA + I+ GS T
Sbjct: 111 TKVILDGNSLEKVDPQLVDGH-------LSYFLGAIGMPGLTSLIGIQEKGHITAGSNKT 163
Query: 197 VVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQ 254
+V+ G G G Q G SR++G+ EKC + G +N + V +
Sbjct: 164 MVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKK--DNVAE 221
Query: 255 VIKRITDGGADYSFECIGDTGMITTA 280
++ G D F+ +G G I+
Sbjct: 222 QLRESCPAGVDVYFDNVG--GNISDT 245
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Length = 141 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 1e-04
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
++ G G+ + + A G +++ VD + EK E + G
Sbjct: 9 YIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEG 49
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 2e-04
Identities = 8/44 (18%), Positives = 14/44 (31%)
Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
+ + G G +G +A K + D + GV
Sbjct: 8 ICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVA 51
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 3e-04
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
GS V + GLG G+++A+ A GA + + + G+ F
Sbjct: 157 GSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVPF 204
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Length = 364 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 3e-04
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
G+ A A+ + +G V + GLG V ++ + GA +++ D N A A
Sbjct: 157 GMKAAAKEAFGSDSL-EGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVA 214
Query: 237 FGVTEFLNPND 247
+ + PN
Sbjct: 215 EEGADAVAPNA 225
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
G ++I+G G +G S+A A A G +IGV+T +
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTTGHPAD 174
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 378 | |||
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.89 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 99.12 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.95 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.66 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.55 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.46 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.45 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.42 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.37 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.13 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 98.13 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.06 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.04 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.99 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.96 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 97.93 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.86 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.86 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.79 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.74 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.69 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.67 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.67 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.66 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.65 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.65 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 97.62 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 97.6 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.6 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.55 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 97.55 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.54 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.52 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.43 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.42 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 97.39 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.38 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.36 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 97.35 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 97.35 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.33 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 97.31 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 97.27 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.23 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.19 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.19 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.19 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.17 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.16 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.15 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 97.13 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 97.12 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 97.11 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.11 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 97.1 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.08 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.08 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 97.08 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.07 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 97.07 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 97.06 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 97.06 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 97.05 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 97.05 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.01 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 96.98 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 96.98 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 96.97 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 96.96 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 96.96 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 96.95 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 96.95 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 96.95 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 96.94 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 96.94 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 96.94 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 96.93 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.93 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 96.93 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 96.93 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 96.92 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 96.92 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 96.92 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 96.9 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 96.9 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 96.89 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 96.89 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 96.88 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 96.88 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 96.88 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 96.88 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 96.88 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 96.88 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 96.87 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 96.87 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 96.86 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.86 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 96.86 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 96.86 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 96.86 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 96.86 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 96.85 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 96.85 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 96.84 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 96.82 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 96.82 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.82 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 96.82 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 96.81 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 96.81 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 96.81 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 96.8 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 96.8 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 96.79 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.79 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 96.79 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 96.78 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 96.78 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 96.78 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 96.77 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 96.77 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.77 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 96.77 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 96.76 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 96.76 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 96.76 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 96.76 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 96.76 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 96.75 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.75 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 96.74 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 96.74 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 96.73 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 96.73 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 96.73 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 96.72 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 96.72 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 96.72 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 96.72 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 96.72 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.71 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 96.71 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 96.7 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 96.7 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.7 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 96.7 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 96.69 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 96.69 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 96.69 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 96.68 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 96.68 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 96.68 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.68 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.67 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 96.67 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 96.66 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 96.66 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 96.66 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.66 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 96.65 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 96.65 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 96.65 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.64 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 96.64 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 96.64 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.64 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 96.63 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 96.62 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 96.62 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 96.62 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 96.62 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.61 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 96.61 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.6 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 96.6 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 96.59 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 96.59 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 96.59 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 96.58 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 96.57 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 96.57 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.57 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 96.57 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 96.57 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 96.56 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 96.55 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 96.55 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 96.55 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 96.55 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 96.55 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 96.55 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 96.55 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 96.55 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 96.54 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 96.54 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.54 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 96.53 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 96.51 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 96.51 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.51 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 96.51 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 96.5 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 96.5 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 96.48 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 96.48 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.48 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.48 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 96.47 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 96.47 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 96.46 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 96.46 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 96.45 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 96.44 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.44 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 96.43 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 96.43 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.42 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 96.41 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.41 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.41 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 96.41 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 96.4 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 96.39 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 96.39 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.38 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 96.37 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 96.37 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 96.36 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 96.35 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 96.35 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 96.35 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 96.35 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 96.33 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 96.32 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 96.32 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.32 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.32 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.32 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 96.31 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 96.3 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 96.29 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.28 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.28 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 96.27 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 96.27 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 96.27 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 96.27 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.27 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 96.27 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.26 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.26 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 96.26 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 96.25 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 96.24 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 96.24 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 96.24 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.24 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.22 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 96.22 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 96.22 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 96.22 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 96.21 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 96.21 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 96.2 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.2 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 96.2 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 96.19 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 96.19 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 96.17 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 96.16 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 96.16 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 96.15 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 96.15 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.13 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 96.13 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.12 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 96.12 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 96.11 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 96.11 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 96.09 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 96.09 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 96.09 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 96.07 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 96.07 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 96.07 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 96.05 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 96.04 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 96.04 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 96.04 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 96.04 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.01 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.01 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 96.01 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.0 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 96.0 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 95.99 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 95.98 | |
| 3uwp_A | 438 | Histone-lysine N-methyltransferase, H3 lysine-79; | 95.97 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 95.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 95.95 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 95.95 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 95.9 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 95.89 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 95.89 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 95.89 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 95.88 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 95.88 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 95.88 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 95.87 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 95.87 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 95.87 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 95.87 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 95.86 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 95.84 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 95.83 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 95.83 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 95.83 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 95.82 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 95.81 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 95.8 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 95.8 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 95.79 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 95.78 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 95.77 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 95.77 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 95.77 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 95.77 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 95.77 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 95.76 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 95.76 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 95.76 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 95.75 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 95.75 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 95.75 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 95.74 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 95.74 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 95.72 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 95.72 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 95.72 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 95.72 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 95.71 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 95.7 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 95.7 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 95.69 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 95.68 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 95.67 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 95.67 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.66 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 95.65 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 95.65 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 95.65 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 95.65 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 95.65 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 95.6 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 95.59 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 95.58 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 95.57 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 95.57 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 95.57 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 95.55 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 95.54 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 95.53 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 95.5 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 95.5 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 95.5 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 95.48 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 95.48 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 95.47 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 95.45 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 95.44 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 95.44 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.42 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 95.42 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 95.41 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 95.41 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 95.41 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 95.41 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 95.4 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 95.39 | |
| 3ajd_A | 274 | Putative methyltransferase MJ0026; tRNA, M5C, ross | 95.34 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 95.34 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 95.33 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 95.29 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 95.29 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 95.28 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 95.28 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 95.24 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 95.23 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 95.22 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 95.22 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 95.22 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 95.2 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 95.19 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 95.19 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.15 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 95.14 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 95.12 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 95.06 | |
| 1vl5_A | 260 | Unknown conserved protein BH2331; putative methylt | 95.02 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 95.02 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 95.01 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 95.0 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 95.0 | |
| 1pjz_A | 203 | Thiopurine S-methyltransferase; polymorphism, S-ad | 94.98 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 94.97 | |
| 1ixk_A | 315 | Methyltransferase; open beta sheet; 1.90A {Pyrococ | 94.97 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 94.95 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 94.94 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 94.93 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 94.91 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 94.91 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 94.9 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 94.89 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 94.88 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 94.87 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 94.84 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 94.81 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 94.81 | |
| 3f4k_A | 257 | Putative methyltransferase; structural genomics, P | 94.8 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 94.79 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 94.79 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 94.77 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 94.77 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 94.77 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 94.73 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 94.71 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 94.7 | |
| 3bus_A | 273 | REBM, methyltransferase; rebeccamycin synthesis; H | 94.7 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 94.67 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 94.66 |
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-65 Score=480.72 Aligned_cols=373 Identities=52% Similarity=0.978 Sum_probs=331.0
Q ss_pred ccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCC
Q 017052 6 KQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 6 ~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v 82 (378)
++++|++|||++++++++++++++++.|+|+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++|+++
T Consensus 2 ~~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v 81 (378)
T 3uko_A 2 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 81 (378)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTC
T ss_pred CcccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCC
Confidence 45678999999999999889999999999999999999999999999999998875 578999999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCccccccc-ccccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
++|++||||++.+..+|+.|.+|++|+++.|...... ..|+...+|...+..+|...++.++.|+|+||+++|++.+++
T Consensus 82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 161 (378)
T 3uko_A 82 TEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAK 161 (378)
T ss_dssp CSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEE
T ss_pred CcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEE
Confidence 9999999999999999999999999999999986432 133333455555556666666666778999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++
T Consensus 162 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T 3uko_A 162 IDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE 241 (378)
T ss_dssp CCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCE
T ss_pred CCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcE
Confidence 99999999999999999999999988999999999999999999999999999999978999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeee
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
++++++.+.++.+.+++++++++|+||||+|++..+..+++++++++|+++.+|.......+.+.+..+.+++++.|+.+
T Consensus 242 vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T 3uko_A 242 FVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAF 321 (378)
T ss_dssp EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred EEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEe
Confidence 99986435678899999988899999999999888999999999833999999987655666666666566889999877
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCCC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 378 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~~ 378 (378)
+.+...++++++++++.++++++.++++++|+|+++++||+.+++++..|+||++++
T Consensus 322 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~Kvvi~~~~ 378 (378)
T 3uko_A 322 GGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVLDTSK 378 (378)
T ss_dssp GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCSEEEEETTC
T ss_pred cCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCceEEEEecCC
Confidence 655445679999999999999998899999999999999999999887899999875
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-61 Score=453.90 Aligned_cols=365 Identities=43% Similarity=0.767 Sum_probs=307.3
Q ss_pred cccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCc
Q 017052 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
+++|++|||+++++++++++++++|.|+|+++||+|||+++|||++|++++.|.. .+|.++|||++|+|+++|++|++
T Consensus 4 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~ 83 (373)
T 1p0f_A 4 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILGHEAVGVVESIGAGVTC 83 (373)
T ss_dssp TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCCEEEEEEEECTTCCS
T ss_pred cCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCCCCCCcccCcCceEEEEEECCCCCc
Confidence 4578899999999998789999999999999999999999999999999988864 47899999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
|++||||++.+..+|+.|..|++|+++.|....... .|+. .+|..++...|...++....|+|+||+++|++.++++|
T Consensus 84 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 162 (373)
T 1p0f_A 84 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID 162 (373)
T ss_dssp CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred cCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccc-cCCccccccCCcccccccCCccceeEEEEchhhEEECC
Confidence 999999999999999999999999999999754210 1221 11111111111112222234799999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
++++++ ||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++
T Consensus 163 ~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi 241 (373)
T 1p0f_A 163 PKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL 241 (373)
T ss_dssp TTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEE
T ss_pred CCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEE
Confidence 999999 9999999999999988889999999999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCC-ccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++++.+.++.+.+++++++++|+|||++|++..+..+++++++ + |+++.+|.......+.+++..+ .++ ++.|+.+
T Consensus 242 ~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~ 319 (373)
T 1p0f_A 242 NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVF 319 (373)
T ss_dssp CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred ecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eEEeecc
Confidence 8863225688889888877999999999987788999999998 6 9999999765433445554443 345 8888765
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
..+. .++++++++++.++++++.++++++|+++++++||+.+++++..|++|++
T Consensus 320 ~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 373 (373)
T 1p0f_A 320 GGFK-GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIMIY 373 (373)
T ss_dssp GGCC-GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSCSEEEEEC
T ss_pred CCcC-HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCcceEEEeC
Confidence 4432 25799999999999998888889999999999999999888767999875
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-60 Score=451.61 Aligned_cols=367 Identities=46% Similarity=0.842 Sum_probs=306.9
Q ss_pred ccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCC
Q 017052 6 KQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 6 ~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+++.|++|||+++.++++++++++.+.|+|+++||+|||++++||++|++.+.|.. .+|.++|||++|+|+++|++|+
T Consensus 2 ~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~ 81 (376)
T 1e3i_A 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVT 81 (376)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred CCCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCCCCCCCCcccCccccEEEEEECCCCc
Confidence 56789999999999998789999999999999999999999999999999988752 4689999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCccccc----c-cccccccCCCcccccccCCcccccccccceeeEEEEeCCc
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG----L-ERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~----~-~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 158 (378)
+|++||||++.+..+|+.|..|++|+++.|.... . ...|+. .+|..+....|.+..+....|+|+||+++|++.
T Consensus 82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~ 160 (376)
T 1e3i_A 82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM-EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN 160 (376)
T ss_dssp SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred cCCCCCEEEECCcCCCCCCccccCCCcccCcCcCcccccccccccc-ccCccccccCCcccccccCCccceeEEEecccc
Confidence 9999999999999999999999999999998753 1 001211 111111111111112222347999999999999
Q ss_pred eeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 159 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 159 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
++++|+++++++||++++++.|||+++.+++++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|
T Consensus 161 ~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG 240 (376)
T 1e3i_A 161 LARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240 (376)
T ss_dssp EEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT
T ss_pred EEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999999999888899999999999999999999999999999977999999999999999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLK 317 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~ 317 (378)
+++++++++.+.++.+.+++++++++|+|||++|++..+..+++++++++|+++.+|... ..+.+++..+ .++ ++.
T Consensus 241 a~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~--~~~~~~~~~~~~~~-~i~ 317 (376)
T 1e3i_A 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVILGR-SIN 317 (376)
T ss_dssp CSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSS--SEEEEEHHHHHTTC-EEE
T ss_pred CcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCC--CccccCHHHhhccC-eEE
Confidence 999998863225688888888877999999999987788999999998329999999842 3444444443 345 888
Q ss_pred EeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 318 GSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
|+.+..+...++++++++++.++++++.++++++|+|+++++||+.+++++..|++|++
T Consensus 318 g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~ 376 (376)
T 1e3i_A 318 GTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTILTF 376 (376)
T ss_dssp ECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred EEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCCcceEEEeC
Confidence 87654333345789999999999998888899999999999999999988867999975
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-60 Score=450.14 Aligned_cols=367 Identities=45% Similarity=0.820 Sum_probs=307.8
Q ss_pred cccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCc
Q 017052 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
+.+|++|||++++++++++++++.+.|+|+++||+|||+++|||++|++++.|.. .+|.++|||++|+|+++|++|++
T Consensus 3 ~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~ 82 (374)
T 2jhf_A 3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTT 82 (374)
T ss_dssp TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCSSBCCCCSEEEEEEEECTTCCS
T ss_pred CCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCCCCcccCcCceEEEEEECCCCCC
Confidence 4467899999999999789999999999999999999999999999999988865 36899999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
|++||||++.+..+|+.|..|++|+++.|....... .|+. .+|..++...|....+....|+|+||+++|++.++++|
T Consensus 83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 161 (374)
T 2jhf_A 83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID 161 (374)
T ss_dssp CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccc-cCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence 999999999999999999999999999999764311 1221 11111111111111222234799999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++
T Consensus 162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241 (374)
T ss_dssp TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE
T ss_pred CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEe
Confidence 99999999999999999999988889999999999999999999999999999987799999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCC-ccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++++...++.+.+++++++++|+|||++|++..+..+++++++ + |+++.+|.......+.+++..+ .++ ++.|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~ 319 (374)
T 2jhf_A 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIF 319 (374)
T ss_dssp CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred cccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEecc
Confidence 8863224688888888877999999999987788999999998 6 9999999765433444544433 345 8888865
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
..+...++++++++++.++++++.++++++|+++++++||+.+++++..|++|++
T Consensus 320 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvi~~ 374 (374)
T 2jhf_A 320 GGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGESIRTILTF 374 (374)
T ss_dssp GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCcceEEEeC
Confidence 4433345789999999999998888889999999999999999988767999975
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-60 Score=449.75 Aligned_cols=367 Identities=48% Similarity=0.886 Sum_probs=308.5
Q ss_pred ccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCccccc-ccccCC--CCCcccccceeEEEEEeCCCC
Q 017052 6 KQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT-AWETQA--IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 6 ~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~--~~p~~~G~e~~G~V~~vG~~v 82 (378)
++.+|++|||++++++++++++++.|.|+|+++||+|||.+++||++|++ .+.|.. .+|.++|||++|+|+++|++|
T Consensus 2 ~~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~V 81 (374)
T 1cdo_A 2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGV 81 (374)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTC
T ss_pred CCCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCCCCCCcccCccceEEEEEECCCC
Confidence 45688999999999999789999999999999999999999999999999 888754 578999999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
++|++||||++.+..+|+.|..|++|+++.|....... .|+. .+|..++...|...++....|+|+||+++|++.+++
T Consensus 82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 160 (374)
T 1cdo_A 82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK 160 (374)
T ss_dssp CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred ccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccc-cCCccccccCCcccccccCCccceeEEEEchhheEE
Confidence 99999999999999999999999999999998754211 1221 122111111111122222347999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+++++++||++++++.|||+++.+++++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++
T Consensus 161 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~ 240 (374)
T 1cdo_A 161 IDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD 240 (374)
T ss_dssp CCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCE
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCce
Confidence 99999999999999999999999888899999999999999999999999999999977999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCC-ccEEEeccCCCCCeeecccccc-ccccEEEEe
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGS 319 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 319 (378)
++++++.+.++.+.+++++.+++|+|||++|++..+..+++++++ + |+++.+|.... ..+.+++..+ .+. ++.|+
T Consensus 241 vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~g~ 317 (374)
T 1cdo_A 241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWKGS 317 (374)
T ss_dssp EECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEEEC
T ss_pred EEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEEEE
Confidence 998863224688888888877999999999987788999999998 6 99999998654 3344444333 345 88887
Q ss_pred eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 320 LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.+..+...++++++++++.++++++.++++++|+++++++||+.+++++..|++|++
T Consensus 318 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 374 (374)
T 1cdo_A 318 MFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 374 (374)
T ss_dssp SGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred ecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCeeEEEEeC
Confidence 654433345789999999999999888889999999999999999988877999975
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-60 Score=450.52 Aligned_cols=366 Identities=47% Similarity=0.886 Sum_probs=306.9
Q ss_pred ccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCc
Q 017052 8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
.+|++|||++++++++++++++.+.|+|+++||+|||+++|||++|++++.|.. .+|.++|||++|+|+++|++|++
T Consensus 2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~ 81 (373)
T 2fzw_A 2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK 81 (373)
T ss_dssp CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence 367899999999999789999999999999999999999999999999988864 46899999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
|++||||++.+..+|+.|..|++|+++.|....... .|+. .+|..++...|...++....|+|+||+++|++.++++|
T Consensus 82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 160 (373)
T 2fzw_A 82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID 160 (373)
T ss_dssp CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccc-cCCcccccccccccccccCCccceeEEEEchhheEECC
Confidence 999999999999999999999999999998753210 0111 11111111111112222234799999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++
T Consensus 161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240 (373)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEE
T ss_pred CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe
Confidence 99999999999999999999988889999999999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCC-ccEEEeccCCCCCeeecccccc-ccccEEEEeee
Q 017052 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 321 (378)
Q Consensus 244 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 321 (378)
++++.+.++.+.+++++++++|+|||++|++..+..+++++++ + |+++.+|.......+.+.+..+ .++ ++.|+.+
T Consensus 241 ~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~ 318 (373)
T 2fzw_A 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAF 318 (373)
T ss_dssp CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred ccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEecc
Confidence 8863225688889888877999999999987788999999998 6 9999999765433444544443 345 8888765
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
..+...++++++++++.++++++.++++++|+++++++||+.+++++..|++|++
T Consensus 319 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvi~~ 373 (373)
T 2fzw_A 319 GGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 373 (373)
T ss_dssp GGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred CCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCcceEEEeC
Confidence 4433345789999999999999888899999999999999999988777999875
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-59 Score=444.50 Aligned_cols=362 Identities=31% Similarity=0.538 Sum_probs=303.2
Q ss_pred ccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
+++|||++++++++++++++.|.|+|+++||+|||+++|||++|++++.|.. .+|.++|||++|+|+++|++|++|++
T Consensus 4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~ 83 (371)
T 1f8f_A 4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQV 83 (371)
T ss_dssp CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCCCCCCcccCcccceEEEEeCCCCCCCCC
Confidence 5679999999998779999999999999999999999999999999998865 56899999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCccccc-ccCCcc-cccccccceeeEEEEeCCceeeCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFS-IKGKPV-YHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~-~~~~~~-~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
||||++.+ .+|+.|..|++|+++.|....... .|.. .+|..++. ..|... .+....|+|+||+++|++.++++|+
T Consensus 84 GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~ 161 (371)
T 1f8f_A 84 GDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK 161 (371)
T ss_dssp TCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred CCEEEecC-CCCCCChhhhCcCcccccccccccccccc-ccccccccccCCccccccccCCccccCeEEechhheEECCC
Confidence 99999999 999999999999999998654210 0110 11110000 000000 0012247999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++
T Consensus 162 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~ 241 (371)
T 1f8f_A 162 DVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN 241 (371)
T ss_dssp TSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEec
Confidence 99999999999999999999988899999999999999999999999999999967999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeecc
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG 323 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 323 (378)
++ +.++.+.+++++++++|+|||++|++..+..++++++++ |+++.+|.........++... +.+++++.++....
T Consensus 242 ~~--~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 318 (371)
T 1f8f_A 242 SK--TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS 318 (371)
T ss_dssp TT--TSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred CC--ccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCC
Confidence 87 567888888888779999999999877889999999997 999999987533333344333 24688999887654
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~ 377 (378)
+...++++++++++.++++++.+++++ |+++++++||+.+++++..|++|+++
T Consensus 319 ~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~~Kvvv~~~ 371 (371)
T 1f8f_A 319 GSPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGITLKPIIKIA 371 (371)
T ss_dssp SCHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSCSEEEEECC
T ss_pred CchHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCceEEEEeeC
Confidence 333356899999999999998888888 99999999999999887779999874
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-59 Score=443.52 Aligned_cols=341 Identities=22% Similarity=0.308 Sum_probs=299.8
Q ss_pred cccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCc
Q 017052 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
..+|.+|||+++++++. +++++.+.|+|++|||+|||++++||++|++.+.|.+ .+|.++|||++|+|+++|+++++
T Consensus 18 ~~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~p~v~G~e~~G~V~~vG~~v~~ 96 (370)
T 4ej6_A 18 LYFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTPPVTLGHEFCGIVVEAGSAVRD 96 (370)
T ss_dssp ---CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSEECCCSEEEEEEEECTTCCS
T ss_pred cccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCCCCCCeecCcceEEEEEEECCCCCC
Confidence 35778899999999974 9999999999999999999999999999999999865 67889999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||++.+..+|+.|.+|+.|+++.|...... |.. ..|+|+||+++|++.++++|+
T Consensus 97 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-------------------~~G~~aey~~v~~~~~~~~P~ 155 (370)
T 4ej6_A 97 IAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAI--GIH-------------------RDGGFAEYVLVPRKQAFEIPL 155 (370)
T ss_dssp SCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEB--TTT-------------------BCCSSBSEEEEEGGGEEEECT
T ss_pred CCCCCEEEECCCCCCCCChHHhCcCcccCCCcccc--CCC-------------------CCCcceEEEEEchhhEEECCC
Confidence 99999999999999999999999999999986542 222 236999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++|| +..++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++
T Consensus 156 ~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 156 TLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD 233 (370)
T ss_dssp TSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred CCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEC
Confidence 99999998 666999999998 8899999999999999999999999999999988999999999999999999999999
Q ss_pred CCCCCchHHHHHHH---HhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEee
Q 017052 245 PNDNNEPVQQVIKR---ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL 320 (378)
Q Consensus 245 ~~~~~~~~~~~i~~---~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 320 (378)
++ +.++.+.+++ ++++++|+||||+|++..+..++++++++ |+++.+|.........++...+ .+++++.|+.
T Consensus 234 ~~--~~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 310 (370)
T 4ej6_A 234 PS--AGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSF 310 (370)
T ss_dssp TT--SSCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEECC
T ss_pred CC--CcCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEec
Confidence 87 6678888888 77679999999999878899999999997 9999999876543444444433 5689999886
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee--EEEEeCCC
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL--RSVIHMPK 378 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~--kvvi~~~~ 378 (378)
... .+++++++++.+|++++.++++++|+++++++|++.+.+++.. |+++++++
T Consensus 311 ~~~----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~ 366 (370)
T 4ej6_A 311 INP----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER 366 (370)
T ss_dssp SCT----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred cCh----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence 532 4699999999999999999999999999999999999887643 88887753
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-58 Score=430.31 Aligned_cols=337 Identities=23% Similarity=0.359 Sum_probs=294.9
Q ss_pred eeeEEeecCCCCeEEEEeecCC-CCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNP-PQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||++++++|. +++++.|+|+ ++||||||||+++|||++|++.+.|.. .+|+++|||++|+|+++|++|.+|++||
T Consensus 1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~~~P~i~G~E~~G~V~~vG~~V~~~~~Gd 79 (346)
T 4a2c_A 1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGD 79 (346)
T ss_dssp CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSSSSSBCCCCEEEEEEEEECTTCCSCCTTC
T ss_pred CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCCCCCccccEEEEEEEEEECCCcccccCCC
Confidence 89999999986 9999999998 579999999999999999998887765 6799999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChh
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 169 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~ 169 (378)
+|.+.+...|+.|..|..|+++.|......+ .. ..|+|+||+++|++.++++|++++++
T Consensus 80 rV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g--~~-------------------~~G~~aey~~v~~~~~~~iP~~l~~~ 138 (346)
T 4a2c_A 80 AVACVPLLPCFTCPECLKGFYSQCAKYDFIG--SR-------------------RDGGFAEYIVVKRKNVFALPTDMPIE 138 (346)
T ss_dssp EEEECCEECCSCSHHHHTTCGGGCSSCEEBT--TT-------------------BCCSSBSEEEEEGGGEEECCTTSCGG
T ss_pred eEEeeeccCCCCcccccCCccccCCCccccc--CC-------------------CCcccccccccchheEEECCCCCCHH
Confidence 9999999999999999999999999876532 22 23699999999999999999999999
Q ss_pred hhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 170 ~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+||.++ .+.++++ +.+..++++|++|||+|+|++|++++|+|+.+|+..+++++++++|+++++++|++++++++ +
T Consensus 139 ~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~--~ 214 (346)
T 4a2c_A 139 DGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSS--E 214 (346)
T ss_dssp GGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETT--T
T ss_pred HHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCC--C
Confidence 999876 4445555 45888999999999999999999999999999997788999999999999999999999998 6
Q ss_pred chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeec-ccc-ccccccEEEEeeeccC--
Q 017052 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYG-LFLSGRTLKGSLFGGW-- 324 (378)
Q Consensus 250 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~-~~~~~~~i~g~~~~~~-- 324 (378)
.++.+.++.++++ ++|+|+|++|++..+..++++++++ |+++.+|....+..+.. +.. .+.+++++.|++....
T Consensus 215 ~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~ 293 (346)
T 4a2c_A 215 MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSP 293 (346)
T ss_dssp SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSS
T ss_pred CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCc
Confidence 6778888888877 8999999999988999999999997 99999998776433322 222 2356899999865432
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
...++++++++++.++++++.++++++|+|+++++||+.+++++.. |+||++
T Consensus 294 ~~~~~~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 294 WPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp TTCHHHHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred chHHHHHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 2245689999999999999999999999999999999999988876 999864
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-58 Score=430.47 Aligned_cols=332 Identities=26% Similarity=0.416 Sum_probs=294.8
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
+|||++++++++++++++.+.|+|+||||+|||++++||++|++.+.|.. .+|.++|||++|+|+++|+++++|++
T Consensus 2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v 81 (340)
T 3s2e_A 2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE 81 (340)
T ss_dssp EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence 69999999999889999999999999999999999999999999998865 47899999999999999999999999
Q ss_pred CCEE-EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V-~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
|||| +..+..+|+.|..|++|+++.|...... |.. ..|+|+||+++|++.++++|+++
T Consensus 82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~--g~~-------------------~~G~~aey~~v~~~~~~~iP~~~ 140 (340)
T 3s2e_A 82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT--GYS-------------------VNGGYGEYVVADPNYVGLLPDKV 140 (340)
T ss_dssp TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB--TTT-------------------BCCSSBSEEEECTTTSEECCTTS
T ss_pred CCEEEecCCCCCCCCChHHhCcCcccCcccccc--CCC-------------------CCCcceeEEEechHHEEECCCCC
Confidence 9999 4567889999999999999999987642 222 23699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++++++
T Consensus 141 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~ 218 (340)
T 3s2e_A 141 GFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNAR 218 (340)
T ss_dssp CHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred CHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCC
Confidence 9999999999999999998 77899999999999999999999999999999 999999999999999999999999987
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 325 (378)
+.++.+.+++ +.+++|++||++|++..+..++++++++ |+++.+|..... ..++... +.+++++.++....
T Consensus 219 --~~~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~-- 290 (340)
T 3s2e_A 219 --DTDPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGD--FGTPIFDVVLKGITIRGSIVGT-- 290 (340)
T ss_dssp --TSCHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCSSE--EEEEHHHHHHTTCEEEECCSCC--
T ss_pred --CcCHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCCCC--CCCCHHHHHhCCeEEEEEecCC--
Confidence 5678888887 4458999999999888999999999997 999999987643 3333322 35688998876543
Q ss_pred cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 326 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
.++++++++++.++++++. .+.++++++++||+.+++++.. |+||++++
T Consensus 291 -~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~ 340 (340)
T 3s2e_A 291 -RSDLQESLDFAAHGDVKAT---VSTAKLDDVNDVFGRLREGKVEGRVVLDFSR 340 (340)
T ss_dssp -HHHHHHHHHHHHTTSCCCC---EEEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred -HHHHHHHHHHHHhCCCCce---EEEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 4579999999999998764 4678999999999999999886 99999875
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-58 Score=433.57 Aligned_cols=339 Identities=21% Similarity=0.277 Sum_probs=293.8
Q ss_pred cccceeeEEeecCCCCeEEEEeecC--------CCCCCcEEEEEeEEecCcccccccccC----C--CCCcccccceeEE
Q 017052 9 QVITCKAAVAWGAGQPLVVEEVEVN--------PPQPEEIRIKVVCTSLCRSDITAWETQ----A--IFPRIFGHEASGI 74 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~~~~~~p--------~~~~~evlV~v~~~~i~~~D~~~~~g~----~--~~p~~~G~e~~G~ 74 (378)
.+++|||+++.+++. +++++.|.| +|+++||+|||+++|||++|++.+.+. . .+|.++|||++|+
T Consensus 5 ~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~ 83 (363)
T 3m6i_A 5 ASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE 83 (363)
T ss_dssp CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred CcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence 678899999998875 999999999 999999999999999999999987632 1 5689999999999
Q ss_pred EEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEE
Q 017052 75 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154 (378)
Q Consensus 75 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v 154 (378)
|+++|+++++|++||||++.+..+|+.|..|++|+++.|...... |.. ...|+|+||+++
T Consensus 84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~--g~~------------------~~~G~~aey~~v 143 (363)
T 3m6i_A 84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFL--STP------------------PVPGLLRRYVNH 143 (363)
T ss_dssp EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEET--TST------------------TSCCSCBSEEEE
T ss_pred EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCcccc--CCC------------------CCCccceeEEEE
Confidence 999999999999999999999999999999999999999987642 211 023699999999
Q ss_pred eCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017052 155 HSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (378)
Q Consensus 155 ~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l 234 (378)
|++.++++|+ +++++||.+. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++++++
T Consensus 144 ~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 220 (363)
T 3m6i_A 144 PAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA 220 (363)
T ss_dssp EGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred ehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 9999999999 9999999884 788999998 889999999999999999999999999999995599999999999999
Q ss_pred HhCCCcEEeCCC---CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc
Q 017052 235 KAFGVTEFLNPN---DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF 310 (378)
Q Consensus 235 ~~~g~~~vi~~~---~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~ 310 (378)
+++ ++.++++. ....++.+.+++++++ ++|+|||++|++..+..++++++++ |+++.+|.......+++.. .+
T Consensus 221 ~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~ 297 (363)
T 3m6i_A 221 KEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQIPFMR-AS 297 (363)
T ss_dssp HHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCSCCCCCHHH-HH
T ss_pred HHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCCCccccHHH-HH
Confidence 999 76655432 1246788899999987 9999999999977889999999997 9999999866543333322 23
Q ss_pred ccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcC-cee-EEEEeCCC
Q 017052 311 LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG-KCL-RSVIHMPK 378 (378)
Q Consensus 311 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~-~~~-kvvi~~~~ 378 (378)
.+++++.++... .++++++++++.++++++.++++++|+++++++||+.++++ ... |++|+.+|
T Consensus 298 ~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 363 (363)
T 3m6i_A 298 VREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE 363 (363)
T ss_dssp HHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred hcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 568888887643 46899999999999999888999999999999999999987 344 99999875
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-57 Score=425.78 Aligned_cols=336 Identities=29% Similarity=0.393 Sum_probs=282.4
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCccccccccc-C-----CCCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET-Q-----AIFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~-----~~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
++|||+++++++.++++++.|.|+|+++||+|||.++|||++|++.+.| . ..+|.++|||++|+|+++|+++++
T Consensus 3 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 82 (348)
T 2d8a_A 3 EKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG 82 (348)
T ss_dssp CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred CcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence 4699999999985699999999999999999999999999999999888 3 257899999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||++.+..+|+.|.+|++|+++.|..... .|.. ..|+|+||+++|++.++++|+
T Consensus 83 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~-------------------~~G~~aey~~v~~~~~~~iP~ 141 (348)
T 2d8a_A 83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI--FGVD-------------------TDGVFAEYAVVPAQNIWKNPK 141 (348)
T ss_dssp CCTTCEEEECCEECCSCCC------------CEE--TTTS-------------------SCCSSBSEEEEEGGGEEECCT
T ss_pred CCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe--ecCC-------------------CCCcCcceEEeChHHeEECCC
Confidence 9999999999999999999999999999987653 2221 136999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++||.++ +++|||+++ +++++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++
T Consensus 142 ~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~ 218 (348)
T 2d8a_A 142 SIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVIN 218 (348)
T ss_dssp TSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred CCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEC
Confidence 99999999886 788999998 78889 9999999999999999999999999878999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-c-ccccccEEEEeee
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-G-LFLSGRTLKGSLF 321 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~-~~~~~~~i~g~~~ 321 (378)
++ +.++.+.+++++++ ++|+|||++|.+..+..++++++++ |+++.+|..... ..++. . .+.+++++.|+..
T Consensus 219 ~~--~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~~~ 293 (348)
T 2d8a_A 219 PF--EEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGK--VTIDFNNLIIFKALTIYGITG 293 (348)
T ss_dssp TT--TSCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--CCCCHHHHTTTTTCEEEECCC
T ss_pred CC--CcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--cccCchHHHHhCCcEEEEecC
Confidence 87 56788889998887 8999999999878889999999997 999999986543 23333 2 2356889988754
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeec-cccHHHHHHHhhcCceeEEEEeCC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLL-FEDINQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-l~~i~~A~~~l~~~~~~kvvi~~~ 377 (378)
.. ..++++++++++.++++++.++++++|+ ++++++||+.++++...|++|+++
T Consensus 294 ~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~gKvvi~~~ 348 (348)
T 2d8a_A 294 RH--LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRAGKTGKVVFMLK 348 (348)
T ss_dssp CC--SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHTTCCSEEEEEC-
T ss_pred CC--cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhCCCceEEEEeeC
Confidence 32 1356899999999999988888999999 999999999998754459999874
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-57 Score=427.98 Aligned_cols=340 Identities=24% Similarity=0.356 Sum_probs=298.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCccccc-ccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT-AWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||++++++++ +++++.|.|+|+++||+|||++++||++|++ ++.|.. .+|.++|||++|+|+++|+++++|++||
T Consensus 1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGd 79 (352)
T 3fpc_A 1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGD 79 (352)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCCCSSEECCCEEEEEEEEECTTCCSCCTTC
T ss_pred CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCCCCCcccCCcceEEEEEECCCCCcCCCCC
Confidence 89999999997 9999999999999999999999999999999 557765 5789999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceeeCCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 167 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~l~ 167 (378)
||++.+..+|+.|.+|+.|+.+.|....... .+ .....|+|+||+++|++ .++++|++++
T Consensus 80 rV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~-~~-----------------~~~~~G~~aey~~v~~~~~~~~~iP~~~~ 141 (352)
T 3fpc_A 80 RVVVPAITPDWRTSEVQRGYHQHSGGMLAGW-KF-----------------SNVKDGVFGEFFHVNDADMNLAHLPKEIP 141 (352)
T ss_dssp EEEECSBCCCSSSHHHHTTCGGGTTSTTTTB-CB-----------------TTTBCCSSBSCEEESSHHHHCEECCTTSC
T ss_pred EEEEccccCCCCchhhcCCCcCCcccccccc-cc-----------------ccCCCCcccceEEeccccCeEEECCCCCC
Confidence 9999999999999999999998887653210 00 01124699999999976 9999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++||.+++++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++++++
T Consensus 142 ~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~- 219 (352)
T 3fpc_A 142 LEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK- 219 (352)
T ss_dssp HHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGG-
T ss_pred HHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCC-
Confidence 999999999999999998 889999999999999999999999999999997899999999999999999999999987
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc---ccccEEEEeeecc
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---LSGRTLKGSLFGG 323 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~~ 323 (378)
+.++.+.+++++++ ++|+|||++|++..+..++++++++ |+++.+|.......++++...+ .+++++.++....
T Consensus 220 -~~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 297 (352)
T 3fpc_A 220 -NGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG 297 (352)
T ss_dssp -GSCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCC
T ss_pred -CcCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeeccC
Confidence 66889999999988 8999999999978899999999997 9999999876555555554432 3577887765422
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeec-cccHHHHHHHhhcCce--eEEEEeCC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLL-FEDINQAFNLMKEGKC--LRSVIHMP 377 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-l~~i~~A~~~l~~~~~--~kvvi~~~ 377 (378)
..++++++++++.++++++.++++++|+ ++++++||+.+++++. .|+||++.
T Consensus 298 --~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~ 352 (352)
T 3fpc_A 298 --GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA 352 (352)
T ss_dssp --HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred --chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence 1346899999999999999889999999 9999999999998654 49999874
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-57 Score=425.84 Aligned_cols=336 Identities=24% Similarity=0.356 Sum_probs=291.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-----CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
|||++++++++++++++.+.|+|++|||+|||++++||++|++.+.|.. .+|.++|||++|+|+++|+++++|++
T Consensus 1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v 80 (345)
T 3jv7_A 1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV 80 (345)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence 8999999999889999999999999999999999999999999988753 56889999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEe-CCceeeCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~iP~~l 166 (378)
||||++.+..+|+.|..|++|+++.|...... +.. ..| ....|+|+||+++| ++.++++|+ +
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~--~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~~p~-~ 143 (345)
T 3jv7_A 81 GDAVAVYGPWGCGACHACARGRENYCTRAADL--GIT-PPG-------------LGSPGSMAEYMIVDSARHLVPIGD-L 143 (345)
T ss_dssp TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHH--TCC-CBT-------------TTBCCSSBSEEEESCGGGEEECTT-C
T ss_pred CCEEEEecCCCCCCChHHHCcCcCcCcccccc--ccc-cCC-------------cCCCceeeEEEEecchhceEeCCC-C
Confidence 99999999999999999999999999432211 000 000 11236999999999 899999999 9
Q ss_pred ChhhhhhhchhhhhhHHHHHh-hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWN-VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~-~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++||.+++++.|||+++.+ ...+++|++|||+|+|++|++++|+|+.+|..+|++++++++|+++++++|+++++++
T Consensus 144 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~ 223 (345)
T 3jv7_A 144 DPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKS 223 (345)
T ss_dssp CHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcC
Confidence 999999999999999999966 4589999999999999999999999999954499999999999999999999999988
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
+ + ++.+.+++++++ ++|+|||++|++..+..++++++++ |+++.+|..... ...++...+.+++++.++....
T Consensus 224 ~--~-~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~~- 297 (345)
T 3jv7_A 224 G--A-GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGA-HAKVGFFMIPFGASVVTPYWGT- 297 (345)
T ss_dssp S--T-THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTTC-CEEESTTTSCTTCEEECCCSCC-
T ss_pred C--C-cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-CCCcCHHHHhCCCEEEEEecCC-
Confidence 5 3 788899999988 9999999999977899999999997 999999987652 2333334446688888776543
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.++++++++++.++++++ +.++|+++++++||+.+++++.. |+||++
T Consensus 298 --~~~~~~~~~l~~~g~l~~---~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 298 --RSELMEVVALARAGRLDI---HTETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp --HHHHHHHHHHHHTTCCCC---CEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred --HHHHHHHHHHHHcCCCce---EEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 357999999999999886 35899999999999999999886 999874
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-57 Score=428.79 Aligned_cols=333 Identities=22% Similarity=0.341 Sum_probs=285.9
Q ss_pred ccccceeeEEeecCCCCeEEEEeecCC-CCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCC
Q 017052 8 PQVITCKAAVAWGAGQPLVVEEVEVNP-PQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGP 80 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~ 80 (378)
..|.+|||++++++++++++++.|.|+ |+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++|+
T Consensus 11 ~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~ 90 (359)
T 1h2b_A 11 LGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAE 90 (359)
T ss_dssp ------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECT
T ss_pred CChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECC
Confidence 356789999999998779999999999 999999999999999999999988753 4689999999999999999
Q ss_pred CCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
++++|++||||+..+..+|+.|..|++|+++.|..... .|+. ..|+|+||+++|++.++
T Consensus 91 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~-------------------~~G~~aey~~v~~~~~~ 149 (359)
T 1h2b_A 91 GVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF--PGLN-------------------IDGGFAEFMRTSHRSVI 149 (359)
T ss_dssp TCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC--BTTT-------------------BCCSSBSEEEECGGGEE
T ss_pred CCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc--cccC-------------------CCCcccceEEechHhEE
Confidence 99999999999999999999999999999999987643 2321 23699999999999999
Q ss_pred eCCCCCChhhhh---hhchhhhhhHHHHHhh-cCCCCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHH
Q 017052 161 KVSSIAPLEKIC---LLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 161 ~iP~~l~~~~aa---~~~~~~~ta~~al~~~-~~~~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~ 235 (378)
++|+++++++|| .+++++.|||+++.+. +++++|++|||+|+|++|++++|+|+.+ |+ +|++++++++++++++
T Consensus 150 ~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~ 228 (359)
T 1h2b_A 150 KLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAE 228 (359)
T ss_dssp ECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHH
T ss_pred ECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHH
Confidence 999999999999 7888999999998655 8999999999999999999999999999 99 8999999999999999
Q ss_pred hCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChH--HHHHHHHHhccCCccEEEeccCCCCCeeecccccccc
Q 017052 236 AFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTG--MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS 312 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~ 312 (378)
++|++++++++ +. +.+.+++++++ ++|+|||++|++. .+..++++ ++ |+++.+|..... .+++. ..+.+
T Consensus 229 ~lGa~~vi~~~--~~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~-~~~~~-~~~~~ 300 (359)
T 1h2b_A 229 RLGADHVVDAR--RD-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL-RFPTI-RVISS 300 (359)
T ss_dssp HTTCSEEEETT--SC-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC-CCCHH-HHHHT
T ss_pred HhCCCEEEecc--ch-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC-CCCHH-HHHhC
Confidence 99999999987 44 88888888887 8999999999965 77778877 65 999999986543 23222 12356
Q ss_pred ccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 313 GRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 313 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
++++.|+.... .++++++++++.++++++. + ++|+++++++|++.+++++.. |+||++
T Consensus 301 ~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 301 EVSFEGSLVGN---YVELHELVTLALQGKVRVE--V-DIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp TCEEEECCSCC---HHHHHHHHHHHHTTSCCCC--E-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred CcEEEEecCCC---HHHHHHHHHHHHcCCCcce--E-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 88998876432 3578999999999997654 6 899999999999999998865 999874
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-57 Score=422.60 Aligned_cols=338 Identities=22% Similarity=0.335 Sum_probs=291.5
Q ss_pred ccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCC
Q 017052 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
.++|||+++++++. +++++.+.|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++|++|+
T Consensus 5 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~ 83 (356)
T 1pl8_A 5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK 83 (356)
T ss_dssp CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred ccCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence 36799999999874 9999999999999999999999999999999887421 4689999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
+|++||||++.+..+|+.|..|++|+++.|..... .|.. ...|+|+||+++|++.++++|
T Consensus 84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~------------------~~~G~~aey~~v~~~~~~~iP 143 (356)
T 1pl8_A 84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF--CATP------------------PDDGNLCRFYKHNAAFCYKLP 143 (356)
T ss_dssp SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE--TTBT------------------TBCCSCBSEEEEEGGGEEECC
T ss_pred CCCCCCEEEEeccCCCCCChHHHCcCcccCCCccc--cCcC------------------CCCCccccEEEeehHHEEECc
Confidence 99999999999999999999999999999987653 2221 013699999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi 243 (378)
+++++++||.+ .++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|+++++
T Consensus 144 ~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi 221 (356)
T 1pl8_A 144 DNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVL 221 (356)
T ss_dssp TTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred CCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 99999999876 4788999998 788999999999999999999999999999997899999999999999999999999
Q ss_pred CCCCC-CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeee
Q 017052 244 NPNDN-NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLF 321 (378)
Q Consensus 244 ~~~~~-~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 321 (378)
++++. ..++.+.+++.+++++|+|||++|++..+..++++++++ |+++.+|..... ..++... +.+++++.++..
T Consensus 222 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~ 298 (356)
T 1pl8_A 222 QISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEM--TTVPLLHAAIREVDIKGVFR 298 (356)
T ss_dssp ECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSC--CCCCHHHHHHTTCEEEECCS
T ss_pred cCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCCCC--CccCHHHHHhcceEEEEecc
Confidence 87521 256777788777668999999999877889999999997 999999975432 2333222 356888888754
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~ 377 (378)
. .++++++++++.++++++.++++++|+++++++||+.++++...|+||+++
T Consensus 299 ~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~~ 350 (356)
T 1pl8_A 299 Y----CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKGLGLKIMLKCD 350 (356)
T ss_dssp C----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEECC
T ss_pred c----HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCCCceEEEEeCC
Confidence 2 357999999999999988888999999999999999999883349999885
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-57 Score=424.76 Aligned_cols=334 Identities=27% Similarity=0.429 Sum_probs=293.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||++++++++++++++.|.|+|+++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2dq4_A 1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ 80 (343)
T ss_dssp CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence 8999999999779999999999999999999999999999999988742 4789999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||++.+..+|+.|..|++|+++.|...... |.. ..|+|+||+++|++.++++|+++
T Consensus 81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-------------------~~G~~aey~~v~~~~~~~iP~~~ 139 (343)
T 2dq4_A 81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQIL--GVD-------------------RDGGFAEYVVVPAENAWVNPKDL 139 (343)
T ss_dssp TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEB--TTT-------------------BCCSSBSEEEEEGGGEEEECTTS
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCccee--cCC-------------------CCCcceeEEEEchHHeEECCCCC
Confidence 999999999999999999999999999976532 221 13699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++||.+. ++.|||+++.+.+++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++ ++++++++
T Consensus 140 ~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~ 216 (343)
T 2dq4_A 140 PFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPL 216 (343)
T ss_dssp CHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTT
T ss_pred CHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcC
Confidence 999999884 778999998548889 999999999999999999999999987799999999999999999 99999987
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-c-ccccccEEEEeeeccC
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-G-LFLSGRTLKGSLFGGW 324 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~-~~~~~~~i~g~~~~~~ 324 (378)
+.++.+.+++++++++|+|||++|++..+..++++++++ |+++.+|..... ..++. . .+.+++++.|+....
T Consensus 217 --~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~~~~~- 290 (343)
T 2dq4_A 217 --EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDP--IRFDLAGELVMRGITAFGIAGRR- 290 (343)
T ss_dssp --TSCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--EEECHHHHTGGGTCEEEECCSCC-
T ss_pred --ccCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ceeCcHHHHHhCceEEEEeecCC-
Confidence 567888888888339999999999877889999999997 999999986533 33333 2 345688998875431
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~ 377 (378)
..++++++++++.++++++.++++++|+++++++|++.+++++..|+||+++
T Consensus 291 -~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~gKvv~~~~ 342 (343)
T 2dq4_A 291 -LWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQAVKVILDPK 342 (343)
T ss_dssp -TTHHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSCSEEEEETT
T ss_pred -CHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCceEEEEeeC
Confidence 2457899999999999988888999999999999999998876689999875
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-57 Score=422.04 Aligned_cols=336 Identities=24% Similarity=0.351 Sum_probs=288.9
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCccccccccc-CC-----CCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET-QA-----IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~~-----~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
++|||+++++++. +++++.|.|+|+++||+|||+++|||++|++.+.+ .. .+|.++|||++|+|+++|+++++
T Consensus 3 ~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 81 (352)
T 1e3j_A 3 SDNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH 81 (352)
T ss_dssp -CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred ccCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence 4699999999874 99999999999999999999999999999988773 22 46899999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||++.+..+|+.|..|++|+++.|...... |.. ...|+|+||+++|++.++++|+
T Consensus 82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~------------------~~~G~~aey~~v~~~~~~~iP~ 141 (352)
T 1e3j_A 82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--ATP------------------PDDGNLARYYVHAADFCHKLPD 141 (352)
T ss_dssp CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEET--TBT------------------TBCCSCBSEEEEEGGGEEECCT
T ss_pred CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCccc--CcC------------------CCCccceeEEEeChHHeEECcC
Confidence 99999999999999999999999999999876532 211 0136999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
++++++||.+ .++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++++
T Consensus 142 ~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~ 218 (352)
T 1e3j_A 142 NVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLV 218 (352)
T ss_dssp TSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEc
Confidence 9999999876 4788999998 78899999999999999999999999999999 7999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhC---C-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEee
Q 017052 245 PNDNNEPVQQVIKRITD---G-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~---~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 320 (378)
+++ ..++.+.+++.++ + ++|+|||++|++..+..++++++++ |+++.+|.......+++. ..+.+++++.++.
T Consensus 219 ~~~-~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~ 295 (352)
T 1e3j_A 219 VDP-AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVPLV-NACAREIDIKSVF 295 (352)
T ss_dssp CCT-TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCCCCHH-HHHTTTCEEEECC
T ss_pred Ccc-cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCccccHH-HHHhcCcEEEEec
Confidence 862 1466677777775 4 8999999999877889999999997 999999975432222221 2235688888875
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCc-ee-EEEEeCC
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-CL-RSVIHMP 377 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~-~~-kvvi~~~ 377 (378)
.. .++++++++++.++++++.++++++|+++++++||+.+++++ .. |+||+++
T Consensus 296 ~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~ 350 (352)
T 1e3j_A 296 RY----CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCR 350 (352)
T ss_dssp SC----SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECC
T ss_pred cc----hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecC
Confidence 42 457999999999999988888999999999999999999887 44 9999886
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-56 Score=419.41 Aligned_cols=334 Identities=25% Similarity=0.335 Sum_probs=293.2
Q ss_pred eeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.+.+ +.+++++.|+|+|+||||||||.|+|||++|++++.|.+ .+|.++|||++|+|+++|++|++|++||
T Consensus 1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~~~p~i~GhE~aG~V~~vG~~V~~~~~Gd 80 (348)
T 4eez_A 1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGTVLGHEGIGIVKEIGADVSSLQVGD 80 (348)
T ss_dssp CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCCCTTCBCCSEEEEEEEEECTTCCSCCTTC
T ss_pred CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCCCCCcccceeEEEEEEEECceeeecccCC
Confidence 8999997543 459999999999999999999999999999999998876 6789999999999999999999999999
Q ss_pred EEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 90 HVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 90 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
||++.+ ...|+.|..|..+..+.|......... ..|+|+||+.+|++.++++|+++++
T Consensus 81 rV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---------------------~~G~~ae~~~~~~~~~~~iP~~~~~ 139 (348)
T 4eez_A 81 RVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYS---------------------VDGGMAEEAIVVADYAVKVPDGLDP 139 (348)
T ss_dssp EEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTT---------------------BCCSSBSEEEEEGGGSCBCCTTSCH
T ss_pred eEeecccccccCccccccCCcccccccccccccc---------------------cCCcceeeccccccceeecCCCCCH
Confidence 998876 445889999999999999887653322 2369999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++||++++++.|||+++ +.+++++|++|||+|+|++|.+++|+|+.++..+|++++++++|+++++++|++++++++
T Consensus 140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~-- 216 (348)
T 4eez_A 140 IEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG-- 216 (348)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC---
T ss_pred HHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC--
Confidence 99999999999999987 788999999999999999999999999987555999999999999999999999999998
Q ss_pred CchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcC
Q 017052 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 249 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
+.++.+.+++++++ ++|.++|+++++..+..++++++++ |+++.+|.......+++... +.+++++.|+.... +
T Consensus 217 ~~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~gs~~~~---~ 291 (348)
T 4eez_A 217 DVNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPNTEMTLSVPTV-VFDGVEVAGSLVGT---R 291 (348)
T ss_dssp CCCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCSCEEEECHHHH-HHSCCEEEECCSCC---H
T ss_pred CCCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccCCCCccCHHHH-HhCCeEEEEEecCC---H
Confidence 67889999999988 9999999999988999999999997 99999997765444433322 35689999887643 4
Q ss_pred CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 328 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
.+++++++++.+|++++ . .++|+|+++++||+.+++++.. |+||+|.+
T Consensus 292 ~~~~~~~~l~~~g~i~p--~-~~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk 340 (348)
T 4eez_A 292 LDLAEAFQFGAEGKVKP--I-VATRKLEEINDIIDEMKAGKIEGRMVIDFTK 340 (348)
T ss_dssp HHHHHHHHHHHTTSCCC--C-EEEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred HHHHHHHHHHHcCCCEE--E-EEEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence 57999999999999865 3 4789999999999999999887 99999864
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-56 Score=415.46 Aligned_cols=331 Identities=28% Similarity=0.405 Sum_probs=288.9
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||++++++++++++++.|.|+|+++||+|||.++|||++|++.+.|.+ .+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG 80 (339)
T 1rjw_A 1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG 80 (339)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence 8999999999779999999999999999999999999999999888754 468999999999999999999999999
Q ss_pred CEEEeecc-cCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 89 EHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 89 d~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
|||++.+. .+|+.|..|+.|+++.|...... |.. ..|+|+||+++|++.++++|++++
T Consensus 81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-------------------~~G~~aey~~v~~~~~~~~P~~~~ 139 (339)
T 1rjw_A 81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA--GYS-------------------VDGGYAEYCRAAADYVVKIPDNLS 139 (339)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB--TTT-------------------BCCSSBSEEEEEGGGCEECCTTSC
T ss_pred CEEEEecCCCCCCCCchhhCcCcccCCCccee--ecC-------------------CCCcceeeEEechHHEEECCCCCC
Confidence 99998664 45999999999999999876532 221 136999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++||.+++++.|||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++++++++
T Consensus 140 ~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~- 216 (339)
T 1rjw_A 140 FEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL- 216 (339)
T ss_dssp HHHHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT-
T ss_pred HHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCC-
Confidence 9999999999999999984 4589999999999998899999999999999 999999999999999999999999887
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccCCc
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~ 326 (378)
+.++.+.+++.+ +++|++||++|.+..+..++++++++ |+++.+|..... +.++... +.+++++.|+....
T Consensus 217 -~~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~--- 288 (339)
T 1rjw_A 217 -KEDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE--MPIPIFDTVLNGIKIIGSIVGT--- 288 (339)
T ss_dssp -TSCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSE--EEEEHHHHHHTTCEEEECCSCC---
T ss_pred -CccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCC--CccCHHHHHhCCcEEEEeccCC---
Confidence 457777888777 68999999999878899999999997 999999987542 3444333 24688988876432
Q ss_pred CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
.++++++++++.++++++. .++|+++++++|++.+++++.. |+||+++|
T Consensus 289 ~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 338 (339)
T 1rjw_A 289 RKDLQEALQFAAEGKVKTI---IEVQPLEKINEVFDRMLKGQINGRVVLTLED 338 (339)
T ss_dssp HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCcc---EEEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 3578999999999998764 4789999999999999988765 99999875
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=420.04 Aligned_cols=335 Identities=24% Similarity=0.385 Sum_probs=282.5
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
++|||+++.++++++++++.+.|+|+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++|+++++|++
T Consensus 3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v 82 (348)
T 3two_A 3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI 82 (348)
T ss_dssp EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence 689999999999889999999999999999999999999999999998875 57899999999999999999999999
Q ss_pred CCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 88 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
||||++.+ ..+|+.|.+|++|+++.|. .... |+. .+.. ........|+|+||+++|++.++++|+++
T Consensus 83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~--~~~-~~~~--------~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 150 (348)
T 3two_A 83 GDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVF--TYD-CLDS--------FHDNEPHMGGYSNNIVVDENYVISVDKNA 150 (348)
T ss_dssp TCEEEECSEEECCSCSHHHHTTCGGGCT-TCEE--SSS-SEEG--------GGTTEECCCSSBSEEEEEGGGCEECCTTS
T ss_pred CCEEEEeCCcCCCCCChhHhCCCcccCc-cccc--ccc-cccc--------cccCCcCCccccceEEechhhEEECCCCC
Confidence 99998865 4789999999999999998 3221 111 0000 00001123799999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++++ .+
T Consensus 151 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~ 227 (348)
T 3two_A 151 PLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TD 227 (348)
T ss_dssp CHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SS
T ss_pred CHHHhhhhhhhHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CC
Confidence 9999999999999999998 56699999999999999999999999999999 999999999999999999999988 32
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC-CCCe-eeccccccccccEEEEeeeccC
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPE-VAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~-~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
...+ . .++|+|||++|++..+..++++++++ |+++.+|... .... ++.....+.+++++.|+....
T Consensus 228 --~~~~----~----~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~- 295 (348)
T 3two_A 228 --PKQC----K----EELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG- 295 (348)
T ss_dssp --GGGC----C----SCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCC-
T ss_pred --HHHH----h----cCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCC-
Confidence 2111 1 18999999999976899999999997 9999999876 3222 332222215688998887643
Q ss_pred CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 325 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
.+++.++++++.++++++. + ++|+++++++||+.+++++.. |+||+++
T Consensus 296 --~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~ 344 (348)
T 3two_A 296 --IKETQEMVDFSIKHNIYPE--I-DLILGKDIDTAYHNLTHGKAKFRYVIDMK 344 (348)
T ss_dssp --HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCCSEEEEEGG
T ss_pred --HHHHHHHHHHHHhCCCCce--E-EEEEHHHHHHHHHHHHcCCCceEEEEecC
Confidence 3578999999999998774 3 799999999999999999876 9999986
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-55 Score=410.64 Aligned_cols=338 Identities=22% Similarity=0.366 Sum_probs=291.6
Q ss_pred cccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCc
Q 017052 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
+|.+|||+++++++.++++++.|.|+|+++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|+++++
T Consensus 2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 81 (347)
T 2hcy_A 2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG 81 (347)
T ss_dssp CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence 56789999999999779999999999999999999999999999999888754 46889999999999999999999
Q ss_pred CCCCCEEEeecc-cCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 85 FNEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 85 ~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
|++||||++.+. .+|+.|..|++|+++.|..... .|.. ..|+|+||+++|++.++++|
T Consensus 82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~--~g~~-------------------~~G~~aey~~v~~~~~~~iP 140 (347)
T 2hcy_A 82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL--SGYT-------------------HDGSFQQYATADAVQAAHIP 140 (347)
T ss_dssp CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE--BTTT-------------------BCCSSBSEEEEETTTSEEEC
T ss_pred CcCCCEEEEecCCCCCCCChhhhCCCcccCccccc--cccC-------------------CCCcceeEEEeccccEEECC
Confidence 999999998664 3599999999999999987653 2221 13699999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
+++++++||.+++++.|||+++ +..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.+
T Consensus 141 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~ 218 (347)
T 2hcy_A 141 QGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVF 218 (347)
T ss_dssp TTCCHHHHGGGGTHHHHHHHHH-HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEE
T ss_pred CCCCHHHHHHHhhhHHHHHHHH-HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceE
Confidence 9999999999999999999998 4558999999999998 9999999999999999 99999999999999999999988
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 321 (378)
+++.+ ..++.+.+++.+.+++|++||++|....+..++++++++ |+++.+|.... ..+.++... +.+++++.|+..
T Consensus 219 ~d~~~-~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~ 295 (347)
T 2hcy_A 219 IDFTK-EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAG-AKCCSDVFNQVVKSISIVGSYV 295 (347)
T ss_dssp EETTT-CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCTT-CEEEEEHHHHHHTTCEEEECCC
T ss_pred EecCc-cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCCC-CCCCCCHHHHhhCCcEEEEccC
Confidence 88752 356777888877668999999999877889999999997 99999998653 233444333 246889988764
Q ss_pred ccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 322 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
.. .++++++++++.++++++. .++|+++++++||+.+++++.. |+||++++
T Consensus 296 ~~---~~~~~~~~~l~~~g~l~~~---~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 347 (347)
T 2hcy_A 296 GN---RADTREALDFFARGLVKSP---IKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK 347 (347)
T ss_dssp CC---HHHHHHHHHHHHTTSCCCC---EEEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred CC---HHHHHHHHHHHHhCCCccc---eEEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence 33 3578999999999998764 4789999999999999988765 99999874
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-55 Score=411.02 Aligned_cols=332 Identities=23% Similarity=0.390 Sum_probs=290.7
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||++++++++| +++++.+.|+|+++||+|||+++|||++|++++.|.+ .+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2eih_A 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA 80 (343)
T ss_dssp CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence 899999999976 8999999999999999999999999999999988854 4688999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||++.+..+|+.|..|+.|+++.|..... .|+. . .|+|+||+++|++.++++|+++
T Consensus 81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~--~G~~-~------------------~G~~aey~~v~~~~~~~~P~~~ 139 (343)
T 2eih_A 81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQI--LGEH-R------------------HGTYAEYVVLPEANLAPKPKNL 139 (343)
T ss_dssp TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE--TTTS-S------------------CCSSBSEEEEEGGGEEECCTTS
T ss_pred CCCEEEECCCCCcccchhhccCcccccccccc--cCcC-C------------------CccceeEEEeChHHeEECCCCC
Confidence 99999999999999999999999999987653 2322 1 2699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|+++++++
T Consensus 140 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~ 218 (343)
T 2eih_A 140 SFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNY 218 (343)
T ss_dssp CHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred CHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcC
Confidence 999999999999999999966679999999999998 9999999999999999 99999999999999999999999888
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 323 (378)
+ +.++.+.+.+.+.+ ++|++||++|+ ..+..++++++++ |+++.+|..... ...++... +.+++++.|+...
T Consensus 219 ~--~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~- 292 (343)
T 2eih_A 219 T--HPDWPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGSTMA- 292 (343)
T ss_dssp T--STTHHHHHHHHTTTTCEEEEEESSCS-SSHHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECCSC-
T ss_pred C--cccHHHHHHHHhCCCCceEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEecCc-
Confidence 6 45778888888876 89999999994 7889999999997 999999987543 11233222 3568888887532
Q ss_pred CCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 324 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
..++++++++++.+++++ +.++++|+++++++||+.+++++.. |++|++
T Consensus 293 --~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (343)
T 2eih_A 293 --SKSRLFPILRFVEEGKLK--PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342 (343)
T ss_dssp --CGGGHHHHHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred --cHHHHHHHHHHHHcCCCC--CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence 246799999999999976 4578999999999999999988765 999986
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-55 Score=418.11 Aligned_cols=345 Identities=24% Similarity=0.328 Sum_probs=291.2
Q ss_pred ccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCC---
Q 017052 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT--- 83 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~--- 83 (378)
..+|||++++++++++++++.|.|+|+++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++| +|+
T Consensus 15 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~ 93 (380)
T 1vj0_A 15 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDL 93 (380)
T ss_dssp CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred hhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Cccccc
Confidence 3579999999999569999999999999999999999999999999998864 468999999999999999 998
Q ss_pred ---cCCCCCEEEeecccCCCCCcccc-cCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEE-eCCc
Q 017052 84 ---EFNEGEHVLTVFIGECKTCRQCK-SDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV-HSGC 158 (378)
Q Consensus 84 ---~~~~Gd~V~~~~~~~~~~~~~c~-~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v-~~~~ 158 (378)
+|++||||++.+..+|+.|.+|+ +|+++.|..... .|.....+ ......|+|+||+++ |++.
T Consensus 94 ~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~--~g~~~~~~-----------~~~~~~G~~aey~~v~~~~~ 160 (380)
T 1vj0_A 94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV--YGINRGCS-----------EYPHLRGCYSSHIVLDPETD 160 (380)
T ss_dssp TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE--TTTTCCSS-----------STTCCCSSSBSEEEECTTCC
T ss_pred cCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce--eccccccC-----------CCCCCCccccceEEEcccce
Confidence 99999999999999999999999 999999987643 12100000 000123699999999 9999
Q ss_pred eeeCCCCCChh-hhhhhchhhhhhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 159 AVKVSSIAPLE-KICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 159 ~~~iP~~l~~~-~aa~~~~~~~ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
++++|++++++ +||.++ +++|||+++ +.++ +++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++++++
T Consensus 161 ~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 161 VLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp EEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred EEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 99999999999 666666 999999998 6788 9999999999999999999999999994499999999999999999
Q ss_pred CCCcEEeCCCC-CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCC-CCCeeeccccc--cc
Q 017052 237 FGVTEFLNPND-NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGL--FL 311 (378)
Q Consensus 237 ~g~~~vi~~~~-~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~--~~ 311 (378)
+|++++++++. .+.++.+.+++++++ ++|+|||++|++..+..++++++++ |+++.+|... . ....++... +.
T Consensus 239 lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~ 316 (380)
T 1vj0_A 239 IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQ-DPVPFKVYEWLVL 316 (380)
T ss_dssp TTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCC-CCEEECHHHHTTT
T ss_pred cCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC-CCeeEchHHHHHh
Confidence 99999998741 124677888888887 8999999999877899999999997 9999999876 3 123344332 45
Q ss_pred cccEEEEeeeccCCcCCcHHHHHHHHHc--CCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCC
Q 017052 312 SGRTLKGSLFGGWKPKTDLPSLVNRYLK--KEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMP 377 (378)
Q Consensus 312 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~ 377 (378)
+++++.|+.... .++++++++++.+ +++ +++++++|+++++++||+.+++++..|+||+++
T Consensus 317 ~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l--~~~i~~~~~l~~~~~A~~~~~~~~~~Kvvl~~~ 379 (380)
T 1vj0_A 317 KNATFKGIWVSD---TSHFVKTVSITSRNYQLL--SKLITHRLPLKEANKALELMESREALKVILYPE 379 (380)
T ss_dssp TTCEEEECCCCC---HHHHHHHHHHHHTCHHHH--GGGCCEEEEGGGHHHHHHHHHHTSCSCEEEECC
T ss_pred CCeEEEEeecCC---HHHHHHHHHHHHhhcCCe--eeEEEEEEeHHHHHHHHHHHhcCCCceEEEEeC
Confidence 689998876542 3578999999999 887 456789999999999999998765449999875
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-56 Score=419.15 Aligned_cols=339 Identities=20% Similarity=0.262 Sum_probs=284.1
Q ss_pred cccceeeEEeecCCCCeEEEE--eecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCC
Q 017052 9 QVITCKAAVAWGAGQPLVVEE--VEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~~~--~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
.|.+|||+++.+++.++++++ .|.|+|+++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|++++
T Consensus 3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~ 82 (360)
T 1piw_A 3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN 82 (360)
T ss_dssp TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCC
Confidence 456899999999987799999 99999999999999999999999999998854 4689999999999999999999
Q ss_pred -cCCCCCEEEee-cccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 84 -EFNEGEHVLTV-FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 84 -~~~~Gd~V~~~-~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
+|++||||.+. +..+|+.|..|++|+++.|........+.. ..| ....|+|+||+++|++.+++
T Consensus 83 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~ 148 (360)
T 1piw_A 83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY-EDG-------------YVSQGGYANYVRVHEHFVVP 148 (360)
T ss_dssp SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBC-TTS-------------CBCCCSSBSEEEEEGGGEEE
T ss_pred CCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhcccccc-CCC-------------ccCCCcceeEEEEchhheEE
Confidence 99999999554 467899999999999999987510000000 001 01236999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+++++++||.+++++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++
T Consensus 149 iP~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~ 226 (360)
T 1piw_A 149 IPENIPSHLAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADH 226 (360)
T ss_dssp CCTTSCHHHHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSE
T ss_pred CCCCCCHHHhhhhhhhHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCE
Confidence 9999999999999999999999985 4899999999999999999999999999999 8999999999999999999999
Q ss_pred EeCCCCCCc-hHHHHHHHHhCCCccEEEeccCC--hHHHHHHHHHhccCCccEEEeccCCCCC-eeeccccccccccEEE
Q 017052 242 FLNPNDNNE-PVQQVIKRITDGGADYSFECIGD--TGMITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGLFLSGRTLK 317 (378)
Q Consensus 242 vi~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~i~ 317 (378)
+++++ +. ++.+.+. +++|+|||++|+ +..+..++++++++ |+++.+|.... . .++... .+.+++++.
T Consensus 227 v~~~~--~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~-~~~~~~~i~ 297 (360)
T 1piw_A 227 YIATL--EEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-HEMLSLKP-YGLKAVSIS 297 (360)
T ss_dssp EEEGG--GTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-SCCEEECG-GGCBSCEEE
T ss_pred EEcCc--CchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-ccccCHHH-HHhCCeEEE
Confidence 99886 33 4544433 489999999998 67788899999997 99999998654 2 233222 235688888
Q ss_pred EeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeecccc--HHHHHHHhhcCcee-EEEEeCCC
Q 017052 318 GSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFED--INQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~--i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
++.... .++++++++++.++++++. + ++|++++ +++||+.+++++.. |+||+++|
T Consensus 298 g~~~~~---~~~~~~~~~l~~~g~l~~~--i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~ 355 (360)
T 1piw_A 298 YSALGS---IKELNQLLKLVSEKDIKIW--V-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD 355 (360)
T ss_dssp ECCCCC---HHHHHHHHHHHHHTTCCCC--E-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred EEecCC---HHHHHHHHHHHHhCCCcce--E-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence 876532 3578999999999998654 6 8999999 99999999988865 99998864
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-55 Score=411.30 Aligned_cols=327 Identities=25% Similarity=0.391 Sum_probs=263.0
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-----CCCcccccceeEEEEEeCCCCCcC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
.+|||++++++++++++++.+.|+|+++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|++ ++|
T Consensus 2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~ 80 (344)
T 2h6e_A 2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV 80 (344)
T ss_dssp EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence 369999999998779999999999999999999999999999999988753 36889999999999999999 999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEe-CCceeeCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCAVKVSS 164 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~iP~ 164 (378)
++||||+..+..+|+.|..|++|+++.|..... .|.. ..|+|+||+++| ++.++++ +
T Consensus 81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~-------------------~~G~~aey~~v~~~~~~~~i-~ 138 (344)
T 2h6e_A 81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQII--PGQT-------------------TNGGFSEYMLVKSSRWLVKL-N 138 (344)
T ss_dssp CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC--BTTT-------------------BCCSSBSEEEESCGGGEEEE-S
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCCCccc--cccc-------------------cCCcceeeEEecCcccEEEe-C
Confidence 999999988889999999999999999987643 2221 236999999999 9999999 9
Q ss_pred CCChhhhhhhchhhhhhHHHHHhh----cCCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhCC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNV----ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~----~~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~~g 238 (378)
++++++||.+++++.|||+++.+. .++ +|++|||+|+|++|++++|+|+.+ |+ +|++++++++++++++++|
T Consensus 139 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lG 216 (344)
T 2h6e_A 139 SLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELG 216 (344)
T ss_dssp SSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHT
T ss_pred CCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999998554 288 999999999999999999999999 99 8999999999999999999
Q ss_pred CcEEeCCCCCC-chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccE
Q 017052 239 VTEFLNPNDNN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRT 315 (378)
Q Consensus 239 ~~~vi~~~~~~-~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~ 315 (378)
++++++++ + .+ .+.+++.+ ++|+|||++|++..+..++++++++ |+++.+|...... .++... +.++++
T Consensus 217 a~~vi~~~--~~~~---~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~--~~~~~~~~~~~~~ 288 (344)
T 2h6e_A 217 ADYVSEMK--DAES---LINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRV--SLEAFDTAVWNKK 288 (344)
T ss_dssp CSEEECHH--HHHH---HHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSCC--CCCHHHHHHTTCE
T ss_pred CCEEeccc--cchH---HHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCCCc--ccCHHHHhhCCcE
Confidence 99999875 2 23 34555656 8999999999976899999999997 9999999865432 333322 356889
Q ss_pred EEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 316 LKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 316 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.++.... .++++++++++.++++++. + ++|+++++++||+.+++++.. |+||++
T Consensus 289 i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 289 LLGSNYGS---LNDLEDVVRLSESGKIKPY--I-IKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp EEECCSCC---HHHHHHHHHHHHTTSSCCC--E-EEECC----------------CEEEECC
T ss_pred EEEEecCC---HHHHHHHHHHHHcCCCCcc--e-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 98876432 3578999999999997654 7 899999999999999988765 999864
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-55 Score=420.27 Aligned_cols=337 Identities=24% Similarity=0.330 Sum_probs=287.4
Q ss_pred ccccceeeEEeecCCCCeEEEEeecCC-CCCCcEEEEEeEEecCcccccccccC----------CCCCcccccceeEEEE
Q 017052 8 PQVITCKAAVAWGAGQPLVVEEVEVNP-PQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGIVE 76 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~----------~~~p~~~G~e~~G~V~ 76 (378)
+.+.+|++.++.+++ .+++++++.|+ |+++||+|||.++|||++|++.+.|. ..+|.++|||++|+|+
T Consensus 26 ~~~~~m~a~~~~~~~-~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~ 104 (404)
T 3ip1_A 26 EGKLTWLGSKVWRYP-EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVV 104 (404)
T ss_dssp TTTBBSCGGGTEEEE-EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEE
T ss_pred hhhhhcceEEEEeCC-ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEE
Confidence 445566666666666 38999999999 99999999999999999999988753 1568899999999999
Q ss_pred EeCCCC------CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceee
Q 017052 77 SVGPGV------TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150 (378)
Q Consensus 77 ~vG~~v------~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 150 (378)
++|+++ ++|++||||++.+..+|+.|.+|++|+++.|...... |+. ..|+|+|
T Consensus 105 ~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~--g~~-------------------~~G~~ae 163 (404)
T 3ip1_A 105 EAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNEL--GFN-------------------VDGAFAE 163 (404)
T ss_dssp EECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEB--TTT-------------------BCCSSBS
T ss_pred EECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCcccccc--CCC-------------------CCCCCcc
Confidence 999999 8999999999999999999999999999999987642 222 2369999
Q ss_pred EEEEeCCceeeCCCCCC------hhhhhhhchhhhhhHHHHHhh-cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEE
Q 017052 151 YTVVHSGCAVKVSSIAP------LEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIG 223 (378)
Q Consensus 151 ~~~v~~~~~~~iP~~l~------~~~aa~~~~~~~ta~~al~~~-~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~ 223 (378)
|+++|++.++++|++++ +.++|+++.+++|||+++... +++++|++|||+|+|++|++++|+|+.+|+.+|++
T Consensus 164 y~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~ 243 (404)
T 3ip1_A 164 YVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVIL 243 (404)
T ss_dssp EEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred eEEechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999886 456888999999999998655 48999999999999999999999999999988999
Q ss_pred EcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCCh-HHHHHHHHHh----ccCCccEEEeccC
Q 017052 224 VDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT-GMITTALQSC----CDGWGLAVTLGVP 297 (378)
Q Consensus 224 v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~~l----~~~~G~~v~~g~~ 297 (378)
++++++++++++++|++++++++ +.++.+.+++++++ ++|+||||+|++ ..+..+++++ +++ |+++.+|..
T Consensus 244 ~~~~~~~~~~~~~lGa~~vi~~~--~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~ 320 (404)
T 3ip1_A 244 SEPSEVRRNLAKELGADHVIDPT--KENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARA 320 (404)
T ss_dssp ECSCHHHHHHHHHHTCSEEECTT--TSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCC
T ss_pred ECCCHHHHHHHHHcCCCEEEcCC--CCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCC
Confidence 99999999999999999999987 66899999999988 999999999996 3667777777 997 999999987
Q ss_pred CCCCeeeccccccccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.....+++... +.+++++.|+.... ..++++++++++.++ +++.++++++|+++++++||+.+..+ |+||++
T Consensus 321 ~~~~~~~~~~~-~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~~G---Kvvl~~ 392 (404)
T 3ip1_A 321 DAKIPLTGEVF-QVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQTD---KSLVKV 392 (404)
T ss_dssp CSCEEECHHHH-HHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTTTC---TTCSCE
T ss_pred CCCCcccHHHH-hccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHhCC---cEEEec
Confidence 75443333322 25688998876432 235799999999999 98888899999999999999999844 555554
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-54 Score=408.29 Aligned_cols=331 Identities=24% Similarity=0.270 Sum_probs=284.9
Q ss_pred cccceeeEEeecCC-CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC
Q 017052 9 QVITCKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 9 ~~~~~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+|.+|||+++++++ +++++++.|.|+|++|||+|||+++|||++|++++.|.+ .+|.++|||++|+|+++|++++
T Consensus 24 m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~ 103 (363)
T 3uog_A 24 MSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVT 103 (363)
T ss_dssp CCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred CchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCC
Confidence 56779999999875 359999999999999999999999999999999988864 4689999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccc--cccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER--RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~--~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
+|++||||++.+.. .|..|. +.|....... .|.. ..|+|+||+++|++.+++
T Consensus 104 ~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~-------------------~~G~~aey~~v~~~~~~~ 157 (363)
T 3uog_A 104 RFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGA-------------------HPGVLSEYVVLPEGWFVA 157 (363)
T ss_dssp SCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTT-------------------SCCCCBSEEEEEGGGEEE
T ss_pred CCCCCCEEEEeccc------cccccc-cccccccccccccCcC-------------------CCCcceeEEEechHHeEE
Confidence 99999999987543 567777 8887422100 1111 236999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++
T Consensus 158 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~ 236 (363)
T 3uog_A 158 APKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADH 236 (363)
T ss_dssp CCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSE
T ss_pred CCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCE
Confidence 999999999999999999999999888999999999999999999999999999999 9999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEe
Q 017052 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGS 319 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 319 (378)
+++.+ ..++.+.+++++++ ++|+||||+|+ ..+..++++++++ |+++.+|..... ...++... +.+++++.|+
T Consensus 237 vi~~~--~~~~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~ 311 (363)
T 3uog_A 237 GINRL--EEDWVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVLEGF-EVSGPVGPLLLKSPVVQGI 311 (363)
T ss_dssp EEETT--TSCHHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEE-EEEEEECCCSSC-EECCBTTHHHHTCCEEEEC
T ss_pred EEcCC--cccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcC-CEEEEEecCCCc-ccCcCHHHHHhCCcEEEEE
Confidence 99843 56888999999988 99999999996 6889999999997 999999987652 23333333 3568999888
Q ss_pred eeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 320 LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
.... .++++++++++.+++++ ++++++|+++++++||+.+++++..|+||++
T Consensus 312 ~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~gKvvi~~ 363 (363)
T 3uog_A 312 SVGH---RRALEDLVGAVDRLGLK--PVIDMRYKFTEVPEALAHLDRGPFGKVVIEF 363 (363)
T ss_dssp CCCC---HHHHHHHHHHHHHHTCC--CCEEEEEEGGGHHHHHHTGGGCCSBEEEEEC
T ss_pred ecCC---HHHHHHHHHHHHcCCCc--cceeeEEcHHHHHHHHHHHHcCCCccEEEeC
Confidence 6543 45799999999999864 4588999999999999999998834999985
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-55 Score=414.20 Aligned_cols=346 Identities=22% Similarity=0.356 Sum_probs=279.5
Q ss_pred ccccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCC
Q 017052 4 SIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGP 80 (378)
Q Consensus 4 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~ 80 (378)
|.-....++|+|++..++++++++++.|.|+|+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++|+
T Consensus 14 ~~~~~~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~ 93 (369)
T 1uuf_A 14 SLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGD 93 (369)
T ss_dssp ---------CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECT
T ss_pred hhhHhcCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECC
Confidence 3334466889999999888889999999999999999999999999999999988754 4689999999999999999
Q ss_pred CCCcCCCCCEEEeecc-cCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCce
Q 017052 81 GVTEFNEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159 (378)
Q Consensus 81 ~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 159 (378)
+|++|++||||++.+. .+|+.|..|++|+++.|........+.....| ....|+|+||+++|++.+
T Consensus 94 ~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g-------------~~~~G~~aeyv~v~~~~~ 160 (369)
T 1uuf_A 94 QVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP-------------GHTLGGYSQQIVVHERYV 160 (369)
T ss_dssp TCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTT-------------SBCCCSSBSEEEEEGGGC
T ss_pred CCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCC-------------CCCCCcccceEEEcchhE
Confidence 9999999999998765 46999999999999999875211100000000 012369999999999999
Q ss_pred eeCCCC-CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 160 VKVSSI-APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 160 ~~iP~~-l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
+++|++ +++++||++++++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|
T Consensus 161 ~~~P~~~ls~~~aa~l~~~~~tA~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lG 238 (369)
T 1uuf_A 161 LRIRHPQEQLAAVAPLLCAGITTYSPLR-HWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALG 238 (369)
T ss_dssp EECCSCGGGHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHT
T ss_pred EECCCCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC
Confidence 999999 999999999999999999985 4689999999999999999999999999999 7999999999999999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLK 317 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~ 317 (378)
++++++++ +.++. .++. +++|+|||++|++..+..++++++++ |+++.+|...... ..++... +.+++++.
T Consensus 239 a~~vi~~~--~~~~~---~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~i~ 310 (369)
T 1uuf_A 239 ADEVVNSR--NADEM---AAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPH-KSPEVFNLIMKRRAIA 310 (369)
T ss_dssp CSEEEETT--CHHHH---HTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEE
T ss_pred CcEEeccc--cHHHH---HHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCCc-cccCHHHHHhCCcEEE
Confidence 99999886 44433 3333 48999999999866789999999997 9999999865422 1233222 35688998
Q ss_pred EeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 318 GSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
|+.... .++++++++++.++++++. + ++|+++++++|++.+++++.. |+||++++
T Consensus 311 g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 366 (369)
T 1uuf_A 311 GSMIGG---IPETQEMLDFCAEHGIVAD--I-EMIRADQINEAYERMLRGDVKYRFVIDNRT 366 (369)
T ss_dssp ECCSCC---HHHHHHHHHHHHHHTCCCC--E-EEECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred EeecCC---HHHHHHHHHHHHhCCCCcc--e-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 876532 3568999999999998764 4 579999999999999988765 99998763
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-54 Score=407.45 Aligned_cols=330 Identities=25% Similarity=0.358 Sum_probs=287.7
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-----------CCCcccccceeEEEEEeCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------IFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----------~~p~~~G~e~~G~V~~vG~~ 81 (378)
|||+++++++.++++++.|.|+|+++||+|||.++|||++|++++.|.. .+|.++|||++|+|+++|++
T Consensus 1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 80 (347)
T 1jvb_A 1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE 80 (347)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence 8999999998779999999999999999999999999999999887632 46889999999999999999
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeC-Ccee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAV 160 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~ 160 (378)
+++|++||||++.+..+|+.|..|+.|+++.|..... .|+. ..|+|+||+++|+ +.++
T Consensus 81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~-------------------~~G~~aey~~v~~~~~~~ 139 (347)
T 1jvb_A 81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW--LGIN-------------------FDGAYAEYVIVPHYKYMY 139 (347)
T ss_dssp CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE--BTTT-------------------BCCSSBSEEEESCGGGEE
T ss_pred CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc--cccc-------------------CCCcceeEEEecCccceE
Confidence 9999999999988889999999999999999987643 2221 1369999999999 9999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCC
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g 238 (378)
++ +++++++||.+++++.|||+++ +++++++|++|||+|+ |++|++++|+|+.. |+ +|+++++++++.+.++++|
T Consensus 140 ~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g 216 (347)
T 1jvb_A 140 KL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAG 216 (347)
T ss_dssp EC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHT
T ss_pred Ee-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhC
Confidence 99 9999999999999999999998 5689999999999998 59999999999999 99 8999999999999999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhC-CCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC-CCCeeeccccccccccEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITD-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~i 316 (378)
++.++++. +.++.+.+.+++. +++|++||++|++..+..++++++++ |+++.+|... .. .++... .+.+++++
T Consensus 217 ~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~-~~~~~~-~~~~~~~i 291 (347)
T 1jvb_A 217 ADYVINAS--MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADL-HYHAPL-ITLSEIQF 291 (347)
T ss_dssp CSEEEETT--TSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCC-CCCHHH-HHHHTCEE
T ss_pred CCEEecCC--CccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCC-CCCHHH-HHhCceEE
Confidence 99999887 4567777888776 58999999999876889999999997 9999999875 32 332221 23568899
Q ss_pred EEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 317 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.++.... .++++++++++.+++++ +.++++|+++++++||+.+++++.. |+||++
T Consensus 292 ~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 292 VGSLVGN---QSDFLGIMRLAEAGKVK--PMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp EECCSCC---HHHHHHHHHHHHTTSSC--CCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred EEEeccC---HHHHHHHHHHHHcCCCC--ceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 8876532 35789999999999975 4578999999999999999988875 999874
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-55 Score=419.31 Aligned_cols=341 Identities=22% Similarity=0.288 Sum_probs=289.2
Q ss_pred ceeeEEeecCCCCeEEEEeecCCC-CC-----CcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCC
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPP-QP-----EEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~-~~-----~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+|||+++++++. ++++++|.|+| ++ +||+|||.++|||++|++++.|.. .+|.++|||++|+|+++|++|+
T Consensus 2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~~~~p~v~GhE~~G~V~~vG~~v~ 80 (398)
T 2dph_A 2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPKGHVLGHEITGEVVEKGSDVE 80 (398)
T ss_dssp CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSCCCTTCBCCCCEEEEEEEECTTCC
T ss_pred ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCcccCCceEEEEEEECCCCC
Confidence 699999999874 99999999987 68 999999999999999999998864 5789999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCccccccc------ccccccCCCcccccccCCcccccccccceeeEEEEeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE------RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~------~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 157 (378)
+|++||||++.+..+|+.|..|++|+++.|...... ..|+. . ....|+|+||+++|++
T Consensus 81 ~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~-~---------------~~~~G~~aey~~v~~~ 144 (398)
T 2dph_A 81 LMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFD-L---------------KGWSGGQAEYVLVPYA 144 (398)
T ss_dssp SCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTT-B---------------SSCCCSSBSEEEESSH
T ss_pred CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccc-c---------------CCCCceeeeeEEeccc
Confidence 999999999999999999999999999999872110 01110 0 0123699999999987
Q ss_pred --ceeeCCCCCChhh----hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017052 158 --CAVKVSSIAPLEK----ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (378)
Q Consensus 158 --~~~~iP~~l~~~~----aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~ 231 (378)
.++++|+++++++ ||+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++++
T Consensus 145 ~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~ 223 (398)
T 2dph_A 145 DYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL 223 (398)
T ss_dssp HHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred cCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 8999999999998 899999999999998 788999999999999999999999999999987899999999999
Q ss_pred HHHHhCCCcEEeCCCCCCchH-HHHHHHHhCC-CccEEEeccCChH--------------HHHHHHHHhccCCccEEEec
Q 017052 232 EKAKAFGVTEFLNPNDNNEPV-QQVIKRITDG-GADYSFECIGDTG--------------MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 232 ~~l~~~g~~~vi~~~~~~~~~-~~~i~~~~~~-~~d~vid~~g~~~--------------~~~~~~~~l~~~~G~~v~~g 295 (378)
++++++|++ +++++ +.++ .+.+++++++ ++|+|||++|+.. .+..++++++++ |+++.+|
T Consensus 224 ~~a~~lGa~-~i~~~--~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~G 299 (398)
T 2dph_A 224 KLLSDAGFE-TIDLR--NSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPG 299 (398)
T ss_dssp HHHHTTTCE-EEETT--SSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECCS
T ss_pred HHHHHcCCc-EEcCC--CcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEec
Confidence 999999996 78876 4454 7888888888 8999999999742 688999999997 9999999
Q ss_pred cCCC-----------CCeeeccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCC--CCcceeeeeccccHHHHH
Q 017052 296 VPKL-----------KPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFM--VDEFITHNLLFEDINQAF 361 (378)
Q Consensus 296 ~~~~-----------~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~l~~i~~A~ 361 (378)
.... .....++... +.+++++.++... ..++++++++++.+++++ +.++++++|+++++++||
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~ 376 (398)
T 2dph_A 300 IYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGY 376 (398)
T ss_dssp CCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHH
T ss_pred cccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHH
Confidence 7621 1223333322 3468888765432 245789999999999998 766788999999999999
Q ss_pred HHhhcCceeEEEEeCC
Q 017052 362 NLMKEGKCLRSVIHMP 377 (378)
Q Consensus 362 ~~l~~~~~~kvvi~~~ 377 (378)
+.+++++..|+||+++
T Consensus 377 ~~~~~~~~gKvvv~~~ 392 (398)
T 2dph_A 377 AKFDKGSPAKFVIDPH 392 (398)
T ss_dssp HHHHTTCSCEEEECTT
T ss_pred HHHhcCCceEEEEecC
Confidence 9998876689999875
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-54 Score=408.37 Aligned_cols=340 Identities=21% Similarity=0.310 Sum_probs=285.0
Q ss_pred cccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcC
Q 017052 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
.+++|++++.+++++++++.+.|.|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++|+++++|
T Consensus 6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~ 85 (357)
T 2cf5_A 6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKF 85 (357)
T ss_dssp CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSC
T ss_pred CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence 46789999999887789999999999999999999999999999999988754 468999999999999999999999
Q ss_pred CCCCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 86 NEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 86 ~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
++||||++.+ ..+|+.|..|+.|+++.|........+.. ..| ....|+|+||+++|++.++++|+
T Consensus 86 ~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~P~ 151 (357)
T 2cf5_A 86 TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVY-ING-------------QPTQGGFAKATVVHQKFVVKIPE 151 (357)
T ss_dssp CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBC-TTS-------------CBCCCSSBSCEEEEGGGEEECCS
T ss_pred CCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccc-cCC-------------CCCCCccccEEEechhhEEECcC
Confidence 9999998754 46899999999999999975533211111 001 11247999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCC-CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEE
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF 242 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~-~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~v 242 (378)
++++++||.+++++.|||+++ +..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++++
T Consensus 152 ~ls~~~aa~l~~~~~ta~~~l-~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v 229 (357)
T 2cf5_A 152 GMAVEQAAPLLCAGVTVYSPL-SHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDY 229 (357)
T ss_dssp SCCHHHHTGGGTHHHHHHHHH-HHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCE
T ss_pred CCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCcee
Confidence 999999999999999999998 567888 99999999999999999999999999 8999999999999888 8999999
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeec
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
++++ +. +.+++++ +++|+|||++|++..+..++++++++ |+++.+|....... .++...+.+++++.|+...
T Consensus 230 i~~~--~~---~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~-~~~~~~~~~~~~i~g~~~~ 301 (357)
T 2cf5_A 230 VIGS--DQ---AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINNPLQ-FLTPLLMLGRKVITGSFIG 301 (357)
T ss_dssp EETT--CH---HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSSCCC-CCHHHHHHHTCEEEECCSC
T ss_pred eccc--cH---HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCCCcc-ccCHHHHhCccEEEEEccC
Confidence 9886 32 3455544 37999999999866788999999997 99999997654222 1222234568899887653
Q ss_pred cCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 323 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
. .++++++++++.++++++. + ++||++++++||+.+++++.. |+||++++
T Consensus 302 ~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 352 (357)
T 2cf5_A 302 S---MKETEEMLEFCKEKGLSSI--I-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG 352 (357)
T ss_dssp C---HHHHHHHHHHHHHTTCCCC--E-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred C---HHHHHHHHHHHHcCCCCCc--e-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence 2 3578999999999998764 4 799999999999999988876 99998764
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-55 Score=413.84 Aligned_cols=330 Identities=19% Similarity=0.241 Sum_probs=281.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CC---CcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IF---PRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~---p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||++++++++++++++.|.|+|+++||+|||.++|||++|++++.|.+ .+ |.++|||++| |+++|++ ++|+
T Consensus 1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~ 78 (357)
T 2b5w_A 1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE 78 (357)
T ss_dssp CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence 8999999999779999999999999999999999999999999998854 35 8899999999 9999999 9999
Q ss_pred CCCEEEeecccC--CCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 87 EGEHVLTVFIGE--CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 87 ~Gd~V~~~~~~~--~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
+||||++.+..+ |+.|..|++|+++.|........|.. ...|+|+||+++|++.++++|+
T Consensus 79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~------------------~~~G~~aey~~v~~~~~~~iP~ 140 (357)
T 2b5w_A 79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIV------------------GAHGYMSEFFTSPEKYLVRIPR 140 (357)
T ss_dssp TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTB------------------EECCSCBSEEEEEGGGEEECCG
T ss_pred CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCcc------------------CCCcceeeEEEEchHHeEECCC
Confidence 999999998888 99999999999999997653211220 0126999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCC------CeEEEEccChHHHHH-HHHH-HHcCCCeEEEEcCChh---hHHH
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKG------STVVIFGLGTVGLSV-AQGA-KARGASRIIGVDTNPE---KCEK 233 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g------~~VLI~Gag~vG~~a-iqla-~~~g~~~vi~v~~~~~---~~~~ 233 (378)
+++ ++ |+++.+++|||+++ +.+++++| ++|||+|+|++|+++ +|+| +.+|+++|++++++++ ++++
T Consensus 141 ~~~-~~-aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~ 217 (357)
T 2b5w_A 141 SQA-EL-GFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI 217 (357)
T ss_dssp GGS-TT-GGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred Ccc-hh-hhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence 999 55 55778999999998 77889999 999999999999999 9999 9999944999999999 9999
Q ss_pred HHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc----
Q 017052 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL---- 309 (378)
Q Consensus 234 l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~---- 309 (378)
++++|++++ +++ +.++.+ ++++ .+++|+|||++|++..+..++++++++ |+++.+|.... ....++...
T Consensus 218 ~~~lGa~~v-~~~--~~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~ 290 (357)
T 2b5w_A 218 IEELDATYV-DSR--QTPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAFHRE 290 (357)
T ss_dssp HHHTTCEEE-ETT--TSCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHHHHH
T ss_pred HHHcCCccc-CCC--ccCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHHhHH
Confidence 999999999 876 456666 7777 558999999999977889999999997 99999998762 223333333
Q ss_pred -cccccEEEEeeeccCCcCCcHHHHHHHHHcC--CCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCCC
Q 017052 310 -FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK--EFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 378 (378)
Q Consensus 310 -~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~~ 378 (378)
+.+++++.|+.... .++++++++++.++ ++ +.++++++|+++++++||+.+ +...|+||+++|
T Consensus 291 ~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~-~~~~i~~~~~l~~~~~A~~~~--~~~gKvvi~~~~ 356 (357)
T 2b5w_A 291 MVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWF-LEDLVTGVHPLSEFEAAFDDD--DTTIKTAIEFST 356 (357)
T ss_dssp HHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHH-HHHHEEEEEEGGGGGGGGCCS--TTCCEEEEECCC
T ss_pred HHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhh-hhhhcceeecHHHHHHHHHHh--CCCceEEEEecC
Confidence 35688998876532 35789999999999 86 666788999999999999988 444599999875
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-54 Score=404.68 Aligned_cols=345 Identities=21% Similarity=0.331 Sum_probs=282.0
Q ss_pred CcccccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEe
Q 017052 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESV 78 (378)
Q Consensus 2 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~v 78 (378)
+.++++-.+|+|+++..++.++++++.+++.|+|+++||+|||.++|||++|++.+.|.+ .+|.++|||++|+|+++
T Consensus 6 ~~~~~~~~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~v 85 (366)
T 1yqd_A 6 SKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEV 85 (366)
T ss_dssp --CHHHHSSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEE
T ss_pred CCCcchhCCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEE
Confidence 344433234666777776666679999999999999999999999999999999988754 47899999999999999
Q ss_pred CCCCCcCCCCCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC
Q 017052 79 GPGVTEFNEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
Q Consensus 79 G~~v~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 157 (378)
|++|++|++||||++.+ ..+|+.|..|+.|+++.|........|.. ..| ....|+|+||+++|++
T Consensus 86 G~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~ 151 (366)
T 1yqd_A 86 GSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIY-HDG-------------TITYGGYSNHMVANER 151 (366)
T ss_dssp CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBC-TTS-------------CBCCCSSBSEEEEEGG
T ss_pred CCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccc-cCC-------------CcCCCccccEEEEchh
Confidence 99999999999998754 46899999999999999965543221111 011 1124799999999999
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCC-CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK- 235 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~-~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~- 235 (378)
.++++|+++++++||.+++++.|||+++ +..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++
T Consensus 152 ~~~~~P~~ls~~~aa~l~~~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~ 229 (366)
T 1yqd_A 152 YIIRFPDNMPLDGGAPLLCAGITVYSPL-KYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALK 229 (366)
T ss_dssp GCEECCTTSCTTTTGGGGTHHHHHHHHH-HHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHH
T ss_pred hEEECCCCCCHHHhhhhhhhHHHHHHHH-HhcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 9999999999999999999999999998 456788 99999999999999999999999999 8999999999998877
Q ss_pred hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-ccccc
Q 017052 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGR 314 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~ 314 (378)
++|++++++++ +. +.+.+++ +++|+|||++|++..+..++++++++ |+++.+|..... ..++... +.+++
T Consensus 230 ~lGa~~v~~~~--~~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~ 300 (366)
T 1yqd_A 230 NFGADSFLVSR--DQ---EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEKP--LELPAFSLIAGRK 300 (366)
T ss_dssp TSCCSEEEETT--CH---HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSSC--EEECHHHHHTTTC
T ss_pred hcCCceEEecc--CH---HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCCC--CCcCHHHHHhCCc
Confidence 89999999886 32 3455554 38999999999866778999999997 999999986542 2333332 35688
Q ss_pred EEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 315 TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 315 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
++.++.... .+++.++++++.++++++. + ++|+++++++||+.+++++.. |+||+++
T Consensus 301 ~i~g~~~~~---~~~~~~~~~l~~~g~l~~~--~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 358 (366)
T 1yqd_A 301 IVAGSGIGG---MKETQEMIDFAAKHNITAD--I-EVISTDYLNTAMERLAKNDVRYRFVIDVG 358 (366)
T ss_dssp EEEECCSCC---HHHHHHHHHHHHHTTCCCC--E-EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred EEEEecCCC---HHHHHHHHHHHHcCCCCCc--e-EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence 888876532 3468899999999998765 4 799999999999999988875 9999764
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-54 Score=411.30 Aligned_cols=343 Identities=22% Similarity=0.320 Sum_probs=285.6
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCC-CCc------EEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCC
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQ-PEE------IRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~-~~e------vlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v 82 (378)
+|||+++.+++. +++++.|.|+|+ ++| |+|||++++||++|++++.|.. .+|.++|||++|+|+++|+++
T Consensus 2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~p~v~GhE~~G~V~~vG~~v 80 (398)
T 1kol_A 2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDV 80 (398)
T ss_dssp CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCCCTTCBCCCCEEEEEEEECTTC
T ss_pred ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCCCCCCcccCcccEEEEEEECCCC
Confidence 599999998874 999999999997 899 9999999999999999998865 468899999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccc----cccccCCCcccccccCCcccccccccceeeEEEEeCC-
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 157 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 157 (378)
++|++||||++.+..+|+.|.+|++|+++.|....... .|+. .. ....|+|+||+++|++
T Consensus 81 ~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~-~~--------------~~~~G~~aey~~v~~~~ 145 (398)
T 1kol_A 81 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV-DM--------------GDWTGGQAEYVLVPYAD 145 (398)
T ss_dssp CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT-TS--------------CCBCCCSBSEEEESSHH
T ss_pred CcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeec-cC--------------CCCCceeeeEEEecchh
Confidence 99999999999888999999999999999998764211 1110 00 0123799999999987
Q ss_pred -ceeeCCCCCChhh----hhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 158 -CAVKVSSIAPLEK----ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 158 -~~~~iP~~l~~~~----aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
.++++|+++++++ +|+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++
T Consensus 146 ~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~ 224 (398)
T 1kol_A 146 FNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLA 224 (398)
T ss_dssp HHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CeEEECCCCcchhhhcccccccccHHHHHHHHH-HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHH
Confidence 8999999999988 788999999999998 5789999999999999999999999999999977999999999999
Q ss_pred HHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCCh---------------HHHHHHHHHhccCCccEEEecc
Q 017052 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT---------------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 233 ~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+++++|++ ++++++ ...+.+.+++++++ ++|+|||++|++ ..+..++++++++ |+++.+|.
T Consensus 225 ~a~~lGa~-~i~~~~-~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~ 301 (398)
T 1kol_A 225 HAKAQGFE-IADLSL-DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGL 301 (398)
T ss_dssp HHHHTTCE-EEETTS-SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSC
T ss_pred HHHHcCCc-EEccCC-cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEecc
Confidence 99999997 777752 23478889998887 899999999975 2688999999997 99999997
Q ss_pred CC-CCC----------eeeccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCC-CCcceeeeeccccHHHHHHH
Q 017052 297 PK-LKP----------EVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFM-VDEFITHNLLFEDINQAFNL 363 (378)
Q Consensus 297 ~~-~~~----------~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~l~~i~~A~~~ 363 (378)
.. ... .+.+.... +.+++++.+.... ..++++++++++.+++++ ..++++++|+++++++||+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~ 378 (398)
T 1kol_A 302 YVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP---VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGE 378 (398)
T ss_dssp CCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC---HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHH
T ss_pred ccCCcccccccccccccccccHHHHhhcccEEEecccC---hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHH
Confidence 62 111 12222222 2457787765321 134578899999999987 34567899999999999999
Q ss_pred hhcCceeEEEEeCC
Q 017052 364 MKEGKCLRSVIHMP 377 (378)
Q Consensus 364 l~~~~~~kvvi~~~ 377 (378)
+++++..|+||+++
T Consensus 379 ~~~~~~gKvvi~~~ 392 (398)
T 1kol_A 379 FDAGVPKKFVIDPH 392 (398)
T ss_dssp HHHTCSCEEEECTT
T ss_pred HhCCCceEEEEEeC
Confidence 98877689999875
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-53 Score=400.36 Aligned_cols=331 Identities=18% Similarity=0.173 Sum_probs=270.2
Q ss_pred CCcccccccccceeeEEeecCCCCeEEE-EeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeC
Q 017052 1 MSTSIKQPQVITCKAAVAWGAGQPLVVE-EVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVG 79 (378)
Q Consensus 1 m~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG 79 (378)
|+++++ ++|.+|||+++++++. ++++ +.+.|+|+++||+|||++++||++|++.+.+...+|.++|||++|+|+++|
T Consensus 1 ~~~~tm-~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~p~v~G~e~~G~V~~vG 78 (371)
T 3gqv_A 1 MGDQPF-IPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATPWAFLGTDYAGTVVAVG 78 (371)
T ss_dssp ---CCC-CCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----CCTTSCCCSEEEEEEEEEC
T ss_pred CCCCCC-CCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcCCCCCccCccccEEEEEEeC
Confidence 555553 4888999999999975 9998 999999999999999999999999999988765779999999999999999
Q ss_pred CCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCce
Q 017052 80 PGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159 (378)
Q Consensus 80 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 159 (378)
+++++|++||||++. |..|..+. ...|+|+||+++|++.+
T Consensus 79 ~~v~~~~~GdrV~~~-------~~~~~~~~---------------------------------~~~G~~aey~~v~~~~~ 118 (371)
T 3gqv_A 79 SDVTHIQVGDRVYGA-------QNEMCPRT---------------------------------PDQGAFSQYTVTRGRVW 118 (371)
T ss_dssp TTCCSCCTTCEEEEE-------CCTTCTTC---------------------------------TTCCSSBSEEECCTTCE
T ss_pred CCCCCCCCCCEEEEe-------ccCCCCCC---------------------------------CCCCcCcCeEEEchhhe
Confidence 999999999999765 33443331 01369999999999999
Q ss_pred eeCCCCCChhhhhhhchhhhhhHHHHHhh-cCC-----------CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 160 VKVSSIAPLEKICLLSCGLSAGLGAAWNV-ADI-----------SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 160 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~-~~~-----------~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
+++|+++++++||.+++++.|||+++.+. .++ ++|++|||+|+ |++|++++|+|+.+|+ +|+++.
T Consensus 119 ~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~- 196 (371)
T 3gqv_A 119 AKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC- 196 (371)
T ss_dssp EECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-
T ss_pred EECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-
Confidence 99999999999999999999999999777 553 89999999998 9999999999999999 899886
Q ss_pred ChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHh-ccCCccEEEeccCCCC----C
Q 017052 227 NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC-CDGWGLAVTLGVPKLK----P 301 (378)
Q Consensus 227 ~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~----~ 301 (378)
+++|+++++++|++++++++ +.++.+.+++++++++|++|||+|++..+..+++++ +++ |+++.+|..... .
T Consensus 197 ~~~~~~~~~~lGa~~vi~~~--~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~ 273 (371)
T 3gqv_A 197 SPHNFDLAKSRGAEEVFDYR--APNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRK 273 (371)
T ss_dssp CGGGHHHHHHTTCSEEEETT--STTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCS
T ss_pred CHHHHHHHHHcCCcEEEECC--CchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCcccccccc
Confidence 78999999999999999997 678899999999889999999999988899999999 476 999999965431 1
Q ss_pred eeec----cccccccccEEEEeeeccCCc------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-
Q 017052 302 EVAA----HYGLFLSGRTLKGSLFGGWKP------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL- 370 (378)
Q Consensus 302 ~~~~----~~~~~~~~~~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~- 370 (378)
.... ....+.+++++.|+....... .+.++++++++.+|++++...+.+.|+++++++||+.+++++..
T Consensus 274 ~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~G 353 (371)
T 3gqv_A 274 MVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSG 353 (371)
T ss_dssp CEEEEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSS
T ss_pred ccceeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCce
Confidence 1221 122334567666553322111 01234788999999999988888889999999999999998764
Q ss_pred -EEEEeCCC
Q 017052 371 -RSVIHMPK 378 (378)
Q Consensus 371 -kvvi~~~~ 378 (378)
|+|++++|
T Consensus 354 kkvvv~~~~ 362 (371)
T 3gqv_A 354 EKLVVRLEG 362 (371)
T ss_dssp CEEEEEECC
T ss_pred EEEEEEeCC
Confidence 88888764
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-52 Score=389.63 Aligned_cols=314 Identities=23% Similarity=0.279 Sum_probs=275.2
Q ss_pred ccccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCC
Q 017052 8 PQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
++|.+|||+++++++++ +++++.+.|+|++|||+|||.++|||++|++++.|.+ .+|.++|||++|+|+++|++++
T Consensus 4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~P~i~G~e~~G~V~~vG~~v~ 83 (334)
T 3qwb_A 4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEKPYVLGREASGTVVAKGKGVT 83 (334)
T ss_dssp -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCCCSSEECCSEEEEEEEEECTTCC
T ss_pred CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCccccceEEEEEEECCCCC
Confidence 36788999999999976 8999999999999999999999999999999988876 5689999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEe-CCceeeC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCAVKV 162 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~~~~i 162 (378)
+|++||||++. . .|+|+||++++ ++.++++
T Consensus 84 ~~~~GdrV~~~-------------------------------~------------------~G~~aey~~v~~~~~~~~~ 114 (334)
T 3qwb_A 84 NFEVGDQVAYI-------------------------------S------------------NSTFAQYSKISSQGPVMKL 114 (334)
T ss_dssp SCCTTCEEEEE-------------------------------C------------------SSCSBSEEEEETTSSEEEC
T ss_pred CCCCCCEEEEe-------------------------------e------------------CCcceEEEEecCcceEEEC
Confidence 99999999876 1 25999999999 9999999
Q ss_pred CCCCChhh---hhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 163 SSIAPLEK---ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 163 P~~l~~~~---aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
|+++++++ ||++++.+.|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|
T Consensus 115 P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g 193 (334)
T 3qwb_A 115 PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYG 193 (334)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT
T ss_pred CCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC
Confidence 99999999 88899999999999988889999999999995 9999999999999999 9999999999999999999
Q ss_pred CcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEE
Q 017052 239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTL 316 (378)
Q Consensus 239 ~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i 316 (378)
++++++++ +.++.+.+.+++.+ ++|++|||+|+ ..+..++++++++ |+++.+|...... ..++... +.+++++
T Consensus 194 a~~~~~~~--~~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~~ 268 (334)
T 3qwb_A 194 AEYLINAS--KEDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFGNASGLI-PPFSITRLSPKNITL 268 (334)
T ss_dssp CSEEEETT--TSCHHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE-EEEEECCCTTCCC-CCBCGGGGTTTTCEE
T ss_pred CcEEEeCC--CchHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEcCCCCCC-CCcchhhhhhCceEE
Confidence 99999987 67888899998877 89999999998 7889999999997 9999999876432 2222222 2458888
Q ss_pred EEeeeccCCc-CC----cHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 317 KGSLFGGWKP-KT----DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 317 ~g~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
.+..+..+.. .+ .++++++++.++++++. ++++|+++++++||+.+++++.. |+||++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q 334 (334)
T 3qwb_A 269 VRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK--IYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ 334 (334)
T ss_dssp ECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC--EEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc--eeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 8765543321 11 24688999999998876 88999999999999999998876 99999875
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=393.57 Aligned_cols=315 Identities=20% Similarity=0.274 Sum_probs=274.8
Q ss_pred cccccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCC
Q 017052 7 QPQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGP 80 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~ 80 (378)
.++|.+|||+++.++++| +++++.+.|+|+++||+|||.++|||++|++.+.|.+ .+|.++|||++|+|+++|+
T Consensus 23 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~ 102 (353)
T 4dup_A 23 MSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGP 102 (353)
T ss_dssp CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECT
T ss_pred CCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECC
Confidence 457889999999998876 9999999999999999999999999999999998876 3578999999999999999
Q ss_pred CCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
++++|++||||++.. . .|+|+||+++|++.++
T Consensus 103 ~v~~~~vGdrV~~~~------------------------------~------------------~G~~aey~~v~~~~~~ 134 (353)
T 4dup_A 103 GVSGYAVGDKVCGLA------------------------------N------------------GGAYAEYCLLPAGQIL 134 (353)
T ss_dssp TCCSCCTTCEEEEEC------------------------------S------------------SCCSBSEEEEEGGGEE
T ss_pred CCCCCCCCCEEEEec------------------------------C------------------CCceeeEEEEcHHHcE
Confidence 999999999998762 1 2599999999999999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|+
T Consensus 135 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa 213 (353)
T 4dup_A 135 PFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA 213 (353)
T ss_dssp ECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC
T ss_pred eCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC
Confidence 999999999999999999999999988899999999999965 9999999999999999 89999999999999999999
Q ss_pred cEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEE
Q 017052 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKG 318 (378)
Q Consensus 240 ~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g 318 (378)
+.+++++ +.++.+.+++++++++|++|||+|+ ..+..++++++++ |+++.+|.........++... +.+++++.|
T Consensus 214 ~~~~~~~--~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g 289 (353)
T 4dup_A 214 KRGINYR--SEDFAAVIKAETGQGVDIILDMIGA-AYFERNIASLAKD-GCLSIIAFLGGAVAEKVNLSPIMVKRLTVTG 289 (353)
T ss_dssp SEEEETT--TSCHHHHHHHHHSSCEEEEEESCCG-GGHHHHHHTEEEE-EEEEECCCTTCSEEEEEECHHHHHTTCEEEE
T ss_pred CEEEeCC--chHHHHHHHHHhCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEEecCCCcccCCCHHHHHhcCceEEE
Confidence 9999987 6678888998884499999999998 5788999999997 999999987653221133332 256899998
Q ss_pred eeeccCCcC-------CcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 319 SLFGGWKPK-------TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 319 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.+..+... +.++++++++.+++++ +.++++|+++++++||+.+++++.. |+||++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 353 (353)
T 4dup_A 290 STMRPRTAEEKRAIRDDLLSEVWPLLEAGTVA--PVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353 (353)
T ss_dssp CCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSC--CCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred EeccccchhhhHHHHHHHHHHHHHHHHCCCcc--CCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 876543211 0167889999999975 4588999999999999999998876 999975
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-53 Score=393.16 Aligned_cols=314 Identities=20% Similarity=0.270 Sum_probs=266.1
Q ss_pred ccccccccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEE
Q 017052 4 SIKQPQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVES 77 (378)
Q Consensus 4 ~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~ 77 (378)
.+++++|.+|||+++.++++| +++++.+.|+|++|||+|||+++|||++|++.+.|.+ .+|.++|||++|+|++
T Consensus 13 ~~~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~ 92 (342)
T 4eye_A 13 EAQTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRS 92 (342)
T ss_dssp -----CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEE
T ss_pred cccccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEE
Confidence 345678899999999998877 9999999999999999999999999999999998865 5689999999999999
Q ss_pred eCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC
Q 017052 78 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 157 (378)
+|+++. |++||||+++. . .|+|+||++++++
T Consensus 93 vG~~v~-~~vGDrV~~~~------------------------------~------------------~G~~aey~~v~~~ 123 (342)
T 4eye_A 93 APEGSG-IKPGDRVMAFN------------------------------F------------------IGGYAERVAVAPS 123 (342)
T ss_dssp CCTTSS-CCTTCEEEEEC------------------------------S------------------SCCSBSEEEECGG
T ss_pred ECCCCC-CCCCCEEEEec------------------------------C------------------CCcceEEEEEcHH
Confidence 999999 99999998762 1 2599999999999
Q ss_pred ceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
.++++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.+++
T Consensus 124 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 124 NILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKS 202 (342)
T ss_dssp GEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH
T ss_pred HeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999988999999999999998 9999999999999999 99999999999999999
Q ss_pred CCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-Ceeecccccccccc
Q 017052 237 FGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSGR 314 (378)
Q Consensus 237 ~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~ 314 (378)
+|++.+++++ .++.+.+++++++ ++|++|||+|+ ..+..++++++++ |+++.+|..... ..+++.. .+.+++
T Consensus 203 ~ga~~v~~~~---~~~~~~v~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~ 276 (342)
T 4eye_A 203 VGADIVLPLE---EGWAKAVREATGGAGVDMVVDPIGG-PAFDDAVRTLASE-GRLLVVGFAAGGIPTIKVNR-LLLRNA 276 (342)
T ss_dssp HTCSEEEESS---TTHHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEE-EEEEEC----------CCCC-GGGTTC
T ss_pred cCCcEEecCc---hhHHHHHHHHhCCCCceEEEECCch-hHHHHHHHhhcCC-CEEEEEEccCCCCCccCHHH-HhhcCC
Confidence 9999999875 5788889999888 99999999998 5788999999997 999999976543 1222222 235689
Q ss_pred EEEEeeeccCC---c---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 315 TLKGSLFGGWK---P---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 315 ~i~g~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
++.|+.+..+. . .+.++++++++.++ + .++++++|+++++++||+.+.+++.. |+||++
T Consensus 277 ~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P 342 (342)
T 4eye_A 277 SLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-M--RPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342 (342)
T ss_dssp EEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred EEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 99988754321 0 13578899999999 4 45588999999999999999999887 999874
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-52 Score=407.39 Aligned_cols=341 Identities=18% Similarity=0.216 Sum_probs=286.6
Q ss_pred cccccceeeEEeecC---------------CCCeEEEEeecCCCCCCcEEEEEeEEecCccccccccc------------
Q 017052 7 QPQVITCKAAVAWGA---------------GQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET------------ 59 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~---------------~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g------------ 59 (378)
.++|.+|||+++.++ ++++++++.|.|+|+|+||+|||.++|||++|++...+
T Consensus 25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~ 104 (456)
T 3krt_A 25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY 104 (456)
T ss_dssp SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence 368899999999987 24599999999999999999999999999999865321
Q ss_pred --------CCCCC-cccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcc
Q 017052 60 --------QAIFP-RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130 (378)
Q Consensus 60 --------~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~ 130 (378)
...+| .++|||++|+|+++|+++++|++||||++.. ..|..|..|..+.++.|...... |+. .
T Consensus 105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-~~c~~~~~~~~~~~~~c~~~~~~--G~~-~---- 176 (456)
T 3krt_A 105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHC-LSVELESSDGHNDTMLDPEQRIW--GFE-T---- 176 (456)
T ss_dssp HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECC-EECCCCSGGGTTSGGGCTTCEET--TTT-S----
T ss_pred cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeC-CcccccccccccccccCcccccc--ccC-C----
Confidence 01467 5899999999999999999999999999854 35888889988989999876542 222 1
Q ss_pred cccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhh--cCCCCCCeEEEEcc-ChHHH
Q 017052 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGL-GTVGL 207 (378)
Q Consensus 131 ~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~--~~~~~g~~VLI~Ga-g~vG~ 207 (378)
..|+|+||+++|++.++++|+++++++||++++++.|||+++... +++++|++|||+|+ |++|+
T Consensus 177 -------------~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~ 243 (456)
T 3krt_A 177 -------------NFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGS 243 (456)
T ss_dssp -------------SSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHH
T ss_pred -------------CCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHH
Confidence 136999999999999999999999999999999999999998654 78999999999998 99999
Q ss_pred HHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC---------------chHHHHHHHHhCC-CccEEEecc
Q 017052 208 SVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN---------------EPVQQVIKRITDG-GADYSFECI 271 (378)
Q Consensus 208 ~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~---------------~~~~~~i~~~~~~-~~d~vid~~ 271 (378)
+++|+|+.+|+ ++++++++++++++++++|++.++++.+.+ ..+.+.+++++++ ++|+||||+
T Consensus 244 ~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~ 322 (456)
T 3krt_A 244 YATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHP 322 (456)
T ss_dssp HHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECS
T ss_pred HHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcC
Confidence 99999999999 888888999999999999999999886322 1345788888887 999999999
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceee
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITH 350 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 350 (378)
|+ ..+..++++++++ |+++.+|..... ...++... +.+++++.|+....+ +++.++++++.++++++ .+++
T Consensus 323 G~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~--~i~~ 394 (456)
T 3krt_A 323 GR-ETFGASVFVTRKG-GTITTCASTSGY-MHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIHP--TLSK 394 (456)
T ss_dssp CH-HHHHHHHHHEEEE-EEEEESCCTTCS-EEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSCC--CEEE
T ss_pred Cc-hhHHHHHHHhhCC-cEEEEEecCCCc-ccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCccc--ceeE
Confidence 98 7899999999997 999999987642 22333222 245778888876442 45778999999999764 5889
Q ss_pred eeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 351 NLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 351 ~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
+|+|+++++|++.+.+++.. |+||.+.
T Consensus 395 ~~~l~~~~eA~~~l~~~~~~GKvvv~~~ 422 (456)
T 3krt_A 395 VYSLEDTGQAAYDVHRNLHQGKVGVLCL 422 (456)
T ss_dssp EEEGGGHHHHHHHHHTTCSSSEEEEESS
T ss_pred EEcHHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 99999999999999998886 9998864
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-52 Score=405.41 Aligned_cols=342 Identities=16% Similarity=0.183 Sum_probs=284.1
Q ss_pred ccccccceeeEEeecCC-------------CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccc--------------
Q 017052 6 KQPQVITCKAAVAWGAG-------------QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-------------- 58 (378)
Q Consensus 6 ~~~~~~~~~a~~~~~~~-------------~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-------------- 58 (378)
..++|.+|||+++++++ +++++++.+.|+|+++||+|||+++|||++|++...
T Consensus 18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~ 97 (447)
T 4a0s_A 18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA 97 (447)
T ss_dssp HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence 35789999999999998 349999999999999999999999999999974321
Q ss_pred --cCC----CCC-cccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCccc
Q 017052 59 --TQA----IFP-RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTR 131 (378)
Q Consensus 59 --g~~----~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~ 131 (378)
|.. .+| .++|||++|+|+++|++|++|++||||++.+...|+.|. |..+.++.|...... |+. .
T Consensus 98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~~--G~~-~----- 168 (447)
T 4a0s_A 98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRAW--GFE-T----- 168 (447)
T ss_dssp TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEET--TTT-S-----
T ss_pred ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-ccccccccccccccc--ccc-C-----
Confidence 111 456 699999999999999999999999999999888787665 556778999876542 222 1
Q ss_pred ccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHh--hcCCCCCCeEEEEcc-ChHHHH
Q 017052 132 FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGL-GTVGLS 208 (378)
Q Consensus 132 ~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~--~~~~~~g~~VLI~Ga-g~vG~~ 208 (378)
..|+|+||+++|++.++++|+++++++||++++++.|||+++.. .+++++|++|||+|+ |++|++
T Consensus 169 ------------~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~ 236 (447)
T 4a0s_A 169 ------------NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSY 236 (447)
T ss_dssp ------------SSCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHH
T ss_pred ------------CCCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHH
Confidence 13699999999999999999999999999999999999999864 388999999999998 999999
Q ss_pred HHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC----------------chHHHHHHHHhCCCccEEEeccC
Q 017052 209 VAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN----------------EPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 209 aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~----------------~~~~~~i~~~~~~~~d~vid~~g 272 (378)
++|+|+.+|+ +++++++++++++.++++|+++++++.+.+ ..+.+.+++++++++|++||++|
T Consensus 237 a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G 315 (447)
T 4a0s_A 237 AIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG 315 (447)
T ss_dssp HHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSC
T ss_pred HHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCC
Confidence 9999999999 899998999999999999999988764211 12367788888449999999999
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeee
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHN 351 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 351 (378)
+ ..+..++.+++++ |+++.+|..... ...+.... +.+++++.|+.... .+++.++++++.+++++ ++++++
T Consensus 316 ~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~~~ 387 (447)
T 4a0s_A 316 R-VTFGLSVIVARRG-GTVVTCGSSSGY-LHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVV--PAMSAV 387 (447)
T ss_dssp H-HHHHHHHHHSCTT-CEEEESCCTTCS-EEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSC--CCEEEE
T ss_pred c-hHHHHHHHHHhcC-CEEEEEecCCCc-ccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCcc--cceeEE
Confidence 8 5789999999997 999999977542 22333222 34578888876543 24677899999999975 458899
Q ss_pred eccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 352 LLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 352 ~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
|+++++++||+.+++++.. |++|.+.
T Consensus 388 ~~l~~~~~A~~~~~~~~~~GKvvv~~~ 414 (447)
T 4a0s_A 388 YPLAEAAEACRVVQTSRQVGKVAVLCM 414 (447)
T ss_dssp EEGGGHHHHHHHHHTTCCSSEEEEESS
T ss_pred EcHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 9999999999999988876 9998864
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-52 Score=389.22 Aligned_cols=314 Identities=17% Similarity=0.216 Sum_probs=268.8
Q ss_pred ccceeeEEeecCCCC---eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCC
Q 017052 10 VITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v 82 (378)
+++|||++++++|+| +++++.|.|+|++|||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+++|+++
T Consensus 2 ~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v 81 (340)
T 3gms_A 2 SLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFV 81 (340)
T ss_dssp CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTS
T ss_pred CcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCC
Confidence 367999999999988 9999999999999999999999999999999998864 568999999999999999999
Q ss_pred CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeC
Q 017052 83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 162 (378)
++|++||||+.+. . .|+|+||+++|++.++++
T Consensus 82 ~~~~vGdrV~~~~------------------------------~------------------~G~~aey~~v~~~~~~~v 113 (340)
T 3gms_A 82 SRELIGKRVLPLR------------------------------G------------------EGTWQEYVKTSADFVVPI 113 (340)
T ss_dssp CGGGTTCEEEECS------------------------------S------------------SCSSBSEEEEEGGGEEEC
T ss_pred CCCCCCCEEEecC------------------------------C------------------CccceeEEEcCHHHeEEC
Confidence 9999999998651 1 259999999999999999
Q ss_pred CCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 163 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
|+++++++||++++.++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++
T Consensus 114 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~ 192 (340)
T 3gms_A 114 PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAY 192 (340)
T ss_dssp CTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSE
T ss_pred CCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcE
Confidence 9999999999999999999999989999999999999998 6999999999999999 9999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEee
Q 017052 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 320 (378)
+++++ +.++.+.+++++++ ++|++|||+|++ ....++++++++ |+++.+|.... ..+++........+.+....
T Consensus 193 ~~~~~--~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~ 267 (340)
T 3gms_A 193 VIDTS--TAPLYETVMELTNGIGADAAIDSIGGP-DGNELAFSLRPN-GHFLTIGLLSG-IQVNWAEIVTKAKVHANIFH 267 (340)
T ss_dssp EEETT--TSCHHHHHHHHTTTSCEEEEEESSCHH-HHHHHHHTEEEE-EEEEECCCTTS-CCCCHHHHHHTSCCEEEECC
T ss_pred EEeCC--cccHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHHhcCC-CEEEEEeecCC-CCCCHHHhhhcccceEEEEE
Confidence 99887 67888999999888 999999999985 456677999997 99999998654 22332222111244444433
Q ss_pred eccC-------CcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCc-e-eEEEEeCCC
Q 017052 321 FGGW-------KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-C-LRSVIHMPK 378 (378)
Q Consensus 321 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~-~-~kvvi~~~~ 378 (378)
+..+ ...++++++++++.+|++++.. ++++|+++++++||+.+++++ . .|++|++.|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~-i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~ 333 (340)
T 3gms_A 268 LRHWNDEVSPYKWQETFRHLIRLVENEQLRFMK-VHSTYELADVKAAVDVVQSAEKTKGKVFLTSYE 333 (340)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC-EEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred ehhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc-ccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 2211 1124688999999999998754 689999999999999999987 4 499999864
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-53 Score=397.91 Aligned_cols=330 Identities=17% Similarity=0.223 Sum_probs=276.8
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCC-CcEEEEEeEEecCccccccccc--CC---CC---CcccccceeEEEEEeCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQP-EEIRIKVVCTSLCRSDITAWET--QA---IF---PRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g--~~---~~---p~~~G~e~~G~V~~vG~~v~ 83 (378)
|||++++++++++++++.|.|+|++ +||+|||.++|||++|++.+.| .+ .+ |.++|||++|+|++ ++ +
T Consensus 1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~ 77 (366)
T 2cdc_A 1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H 77 (366)
T ss_dssp CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence 8999999998779999999999999 9999999999999999999988 43 45 89999999999999 66 8
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
+|++||||++.+..+|+.|.+|++|+++.|........|.. ...|+|+||+++|++.++++|
T Consensus 78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~------------------~~~G~~aey~~v~~~~~~~iP 139 (366)
T 2cdc_A 78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIH------------------KMDGFMREWWYDDPKYLVKIP 139 (366)
T ss_dssp SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTB------------------EECCSCBSEEEECGGGEEEEC
T ss_pred CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCcc------------------CCCCceeEEEEechHHeEECc
Confidence 89999999999999999999999999999987653200210 013699999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHH--h--hcCCC--C-------CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh--
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAW--N--VADIS--K-------GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-- 228 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~--~--~~~~~--~-------g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-- 228 (378)
++++ ++|| ++.++.|||+++. + .++++ + |++|||+|+|++|++++|+|+.+|+ +|+++++++
T Consensus 140 ~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~ 216 (366)
T 2cdc_A 140 KSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPT 216 (366)
T ss_dssp GGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCC
T ss_pred CCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccc
Confidence 9999 8765 6679999999986 4 78888 8 9999999999999999999999999 999999998
Q ss_pred -hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHH-HHHHHHhccCCccEEEeccCCCCCeeecc
Q 017052 229 -EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMI-TTALQSCCDGWGLAVTLGVPKLKPEVAAH 306 (378)
Q Consensus 229 -~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~ 306 (378)
++.++++++|++++ + + + ++.+.+.+ +.+++|++||++|++..+ ..++++++++ |+++.+|..... ...++
T Consensus 217 ~~~~~~~~~~ga~~v-~-~--~-~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~ 288 (366)
T 2cdc_A 217 EVEQTVIEETKTNYY-N-S--S-NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSG-SVPLD 288 (366)
T ss_dssp HHHHHHHHHHTCEEE-E-C--T-TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSC-EEEEE
T ss_pred hHHHHHHHHhCCcee-c-h--H-HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCC-ccccC
Confidence 89999999999988 7 5 4 55566666 446899999999986678 8999999997 999999987543 23333
Q ss_pred cc----ccccccEEEEeeeccCCcCCcHHHHHHHHHcCCCC----CCcceeeeeccccHHHHHHH--hhcCceeEEEEeC
Q 017052 307 YG----LFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFM----VDEFITHNLLFEDINQAFNL--MKEGKCLRSVIHM 376 (378)
Q Consensus 307 ~~----~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~l~~i~~A~~~--l~~~~~~kvvi~~ 376 (378)
.. .+.+++++.|+.... .++++++++++.+++++ +.++++++|+++++++||+. ++++...|+||++
T Consensus 289 ~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~ 365 (366)
T 2cdc_A 289 YKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILW 365 (366)
T ss_dssp HHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred hhhhHHHHhcCcEEEEecCCC---HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEec
Confidence 33 235688998875432 35789999999999977 67778899999999999999 6644434999987
Q ss_pred C
Q 017052 377 P 377 (378)
Q Consensus 377 ~ 377 (378)
+
T Consensus 366 ~ 366 (366)
T 2cdc_A 366 E 366 (366)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-51 Score=380.31 Aligned_cols=313 Identities=22% Similarity=0.225 Sum_probs=265.3
Q ss_pred cceeeEEeecCC-----CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-CCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAG-----QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~-----~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
|+|||++++++| +.+++++.|.|+|++|||+|||++++||++|++.+.|.. .+|.++|||++|+|+++|+++++
T Consensus 1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~p~i~G~e~~G~V~~vG~~v~~ 80 (346)
T 3fbg_A 1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKAPRVLGFDAIGVVESVGNEVTM 80 (346)
T ss_dssp -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSCCSSSCBCCCCCEEEEEEEECTTCCS
T ss_pred CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCCCCCCCcCcCCccEEEEEEeCCCCCc
Confidence 579999999987 349999999999999999999999999999999888764 67999999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||+..... ...|+|+||+++|++.++++|+
T Consensus 81 ~~~GdrV~~~~~~---------------------------------------------~~~G~~aey~~v~~~~~~~iP~ 115 (346)
T 3fbg_A 81 FNQGDIVYYSGSP---------------------------------------------DQNGSNAEYQLINERLVAKAPK 115 (346)
T ss_dssp CCTTCEEEECCCT---------------------------------------------TSCCSSBSEEEEEGGGEEECCS
T ss_pred CCCCCEEEEcCCC---------------------------------------------CCCcceeEEEEEChHHeEECCC
Confidence 9999999875210 0136999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCC------CCCeEEEEc-cChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADIS------KGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~------~g~~VLI~G-ag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
++++++||++++++.|||++|.+.++++ +|++|||+| +|++|++++|+|+.+|+ +|++++++++++++++++
T Consensus 116 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l 194 (346)
T 3fbg_A 116 NISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM 194 (346)
T ss_dssp SSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH
T ss_pred CCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc
Confidence 9999999999999999999998889998 999999995 59999999999999999 999999999999999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEE
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 317 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 317 (378)
|++++++++ .++.+.++++.++++|+||||+|++..+..++++++++ |+++.++... ..+++... ..+++++.
T Consensus 195 Ga~~vi~~~---~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~~--~~~~~~~~-~~~~~~~~ 267 (346)
T 3fbg_A 195 GADIVLNHK---ESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAFE--NDQDLNAL-KPKSLSFS 267 (346)
T ss_dssp TCSEEECTT---SCHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCCS--SCBCGGGG-TTTTCEEE
T ss_pred CCcEEEECC---ccHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCccccc-cccceEEE
Confidence 999999986 36778888874449999999999877789999999997 9999987533 23333322 24578887
Q ss_pred EeeeccCC---c------CCcHHHHHHHHHcCCCCCCcceeeee---ccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 318 GSLFGGWK---P------KTDLPSLVNRYLKKEFMVDEFITHNL---LFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 318 g~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
+..+.... . .+.++++++++.+|++++. ++++| +++++++||+.+++++.. |+||++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~ 339 (346)
T 3fbg_A 268 HEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPT--TTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE 339 (346)
T ss_dssp ECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCC--EEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred EEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECC--ccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence 76543210 0 1347789999999997654 67777 999999999999999987 99999864
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-51 Score=379.35 Aligned_cols=310 Identities=22% Similarity=0.272 Sum_probs=267.7
Q ss_pred ceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCC
Q 017052 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
+|||++++++++| +++++.+.|+|++|||+|||+++|||++|++++.|.+ .+|.++|||++|+|+++|+++++|+
T Consensus 1 MMkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~ 80 (325)
T 3jyn_A 1 MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFK 80 (325)
T ss_dssp CEEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 3999999999987 9999999999999999999999999999999998876 4689999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||+.... ..|+|+||+++|++.++++|+++
T Consensus 81 ~GdrV~~~~~-----------------------------------------------~~G~~aey~~v~~~~~~~~P~~~ 113 (325)
T 3jyn_A 81 VGDRVAYGTG-----------------------------------------------PLGAYSEVHVLPEANLVKLADSV 113 (325)
T ss_dssp TTCEEEESSS-----------------------------------------------SSCCSBSEEEEEGGGEEECCTTS
T ss_pred CCCEEEEecC-----------------------------------------------CCccccceEEecHHHeEECCCCC
Confidence 9999986520 12599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++||++++...|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|+++++++
T Consensus 114 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~ 192 (325)
T 3jyn_A 114 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDY 192 (325)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred CHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999988899999999999995 9999999999999999 99999999999999999999999998
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC-eeecccccccc-ccEEEEeeec
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGLFLS-GRTLKGSLFG 322 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~i~g~~~~ 322 (378)
+ +.++.+.+++++++ ++|++|||+|+ ..+..++++++++ |+++.+|...... .+++.... .+ .+++.+..+.
T Consensus 193 ~--~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 267 (325)
T 3jyn_A 193 S--HEDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFGNASGPVSGVNLGILA-QKDSVYVTRPTLG 267 (325)
T ss_dssp T--TSCHHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEE-EEEEECCCTTCCCCSCCTHHHH-HTTSCEEECCCHH
T ss_pred C--CccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCC-CEEEEEecCCCCCCCCCHHHHh-hcCcEEEEeeeee
Confidence 7 67888999999887 99999999998 7889999999997 9999999876432 23322222 22 4555544332
Q ss_pred cCC-cCCc----HHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 323 GWK-PKTD----LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 323 ~~~-~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+. ..++ ++++++++.++++++. ++++|+++++++||+.+++++.. |+||++
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p 325 (325)
T 3jyn_A 268 SYANNAQNLQTMADELFDMLASGKLKVD--GIEQYALKDAAKAQIELSARRTTGSTILIP 325 (325)
T ss_dssp HHSCSTTHHHHHHHHHHHHHHTTSSCCC--CCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred eecCCHHHHHHHHHHHHHHHHCCCeeCc--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 221 1233 3488999999998876 67999999999999999999887 999864
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-51 Score=381.32 Aligned_cols=312 Identities=19% Similarity=0.217 Sum_probs=266.2
Q ss_pred cccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-----CCCcccccceeEEEEEeCCCCC
Q 017052 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
.|.+|||+++.++++++++++.|.|+|+++||+|||++++||++|++++.|.. .+|.++|||++|+|+++|++++
T Consensus 4 ~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~ 83 (343)
T 3gaz_A 4 TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVD 83 (343)
T ss_dssp --CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCC
Confidence 35679999999999889999999999999999999999999999999988753 5789999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
+|++||||+++.... . ...|+|+||+++|++.++++|
T Consensus 84 ~~~vGdrV~~~~~g~-------------------------~------------------~~~G~~aey~~v~~~~~~~~P 120 (343)
T 3gaz_A 84 SFRVGDAVFGLTGGV-------------------------G------------------GLQGTHAQFAAVDARLLASKP 120 (343)
T ss_dssp SCCTTCEEEEECCSS-------------------------T------------------TCCCSSBSEEEEEGGGEEECC
T ss_pred CCCCCCEEEEEeCCC-------------------------C------------------CCCcceeeEEEecHHHeeeCC
Confidence 999999998752110 0 013699999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
+++++++||.+++++.|||+++.+++++++|++|||+|+ |++|++++|+|+..|+ +|+++ .+++++++++++|++.
T Consensus 121 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~- 197 (343)
T 3gaz_A 121 AALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP- 197 (343)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-
T ss_pred CCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-
Confidence 999999999999999999999988999999999999996 9999999999999999 89999 8899999999999998
Q ss_pred eCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
++ + ..++.+.+++.+.+ ++|++|||+|+ ..+..++.+++++ |+++.+|.... ++.... +.+++++.++..
T Consensus 198 i~-~--~~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~---~~~~~~-~~~~~~~~g~~~ 268 (343)
T 3gaz_A 198 ID-A--SREPEDYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRF-GHVVSCLGWGT---HKLAPL-SFKQATYSGVFT 268 (343)
T ss_dssp EE-T--TSCHHHHHHHHHTTSCEEEEEESSCT-HHHHHHHHHEEEE-EEEEESCCCSC---CCCHHH-HHTTCEEEECCT
T ss_pred ec-c--CCCHHHHHHHHhcCCCceEEEECCCc-HHHHHHHHHHhcC-CeEEEEcccCc---cccchh-hhcCcEEEEEEe
Confidence 66 4 56788889998887 99999999997 6889999999997 99999987652 222222 246888888754
Q ss_pred ccC----C----cCCcHHHHHHHHHcCCCCCCccee-eeeccccHHHHHHHhhcCce----e-EEEEeCC
Q 017052 322 GGW----K----PKTDLPSLVNRYLKKEFMVDEFIT-HNLLFEDINQAFNLMKEGKC----L-RSVIHMP 377 (378)
Q Consensus 322 ~~~----~----~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~i~~A~~~l~~~~~----~-kvvi~~~ 377 (378)
... . ..++++++++++.++++++ .++ ++|+++++++||+.+++++. . |++++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~ 336 (343)
T 3gaz_A 269 LHTLLANEGLAHFGEMLREADALVQTGKLAP--RLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336 (343)
T ss_dssp THHHHHTCSHHHHHHHHHHHHHHHHTTCCCC--CBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred ccchhcccchHHHHHHHHHHHHHHHCCCccc--CccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence 211 0 1246889999999999764 477 79999999999999998754 3 9999875
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-51 Score=379.91 Aligned_cols=305 Identities=19% Similarity=0.194 Sum_probs=258.4
Q ss_pred ccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccC--------CCCCcccccceeEEEEEeC
Q 017052 10 VITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------AIFPRIFGHEASGIVESVG 79 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--------~~~p~~~G~e~~G~V~~vG 79 (378)
.++|||+++.++++| +++++.+.|+|+++||+|||+++|||++|++.+.|. ..+|.++|||++|+|+++|
T Consensus 4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG 83 (321)
T 3tqh_A 4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG 83 (321)
T ss_dssp -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence 467999999999987 999999999999999999999999999999998882 2679999999999999999
Q ss_pred CCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCce
Q 017052 80 PGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159 (378)
Q Consensus 80 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 159 (378)
+++++|++||||++.+..++ ..|+|+||+++|++.+
T Consensus 84 ~~v~~~~~GdrV~~~~~~~~--------------------------------------------~~G~~aey~~v~~~~~ 119 (321)
T 3tqh_A 84 SDVNNVNIGDKVMGIAGFPD--------------------------------------------HPCCYAEYVCASPDTI 119 (321)
T ss_dssp TTCCSCCTTCEEEEECSTTT--------------------------------------------CCCCSBSEEEECGGGE
T ss_pred CCCCCCCCCCEEEEccCCCC--------------------------------------------CCCcceEEEEecHHHh
Confidence 99999999999998742111 1269999999999999
Q ss_pred eeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEc-cChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 160 VKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 160 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~G-ag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
+++|+++++++||++++++.|||+++ +.+++++|++|||+| +|++|++++|+|+.+|+ +|++++ +++++++++++|
T Consensus 120 ~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lG 196 (321)
T 3tqh_A 120 IQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALG 196 (321)
T ss_dssp EECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHT
T ss_pred ccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcC
Confidence 99999999999999999999999999 889999999999997 49999999999999999 899886 566799999999
Q ss_pred CcEEeCCCCCCch-HHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEE
Q 017052 239 VTEFLNPNDNNEP-VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 317 (378)
Q Consensus 239 ~~~vi~~~~~~~~-~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 317 (378)
++++++++ +.+ +.+.+ .++|+||||+|++. +..++++++++ |+++.+|...... .......+++++.
T Consensus 197 a~~~i~~~--~~~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~---~~~~~~~~~~~~~ 264 (321)
T 3tqh_A 197 AEQCINYH--EEDFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITAGR---VIEVAKQKHRRAF 264 (321)
T ss_dssp CSEEEETT--TSCHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTHHH---HHHHHHHTTCEEE
T ss_pred CCEEEeCC--Ccchhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCchh---hhhhhhhcceEEE
Confidence 99999987 344 44333 38999999999854 58999999997 9999998654321 1112224577777
Q ss_pred EeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 318 GSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 318 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
++... ...++++++++++.++++++. ++++|+++++++||+.+++++.. |+||+++
T Consensus 265 ~~~~~--~~~~~~~~~~~l~~~g~l~~~--i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 321 (321)
T 3tqh_A 265 GLLKQ--FNIEELHYLGKLVSEDKLRIE--ISRIFQLSEAVTAHELLETGHVRGKLVFKVR 321 (321)
T ss_dssp CCCCC--CCHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred EEecC--CCHHHHHHHHHHHHCCCcccc--cccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 64322 123578999999999998764 88999999999999999999887 9999874
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-51 Score=383.63 Aligned_cols=312 Identities=19% Similarity=0.281 Sum_probs=258.5
Q ss_pred ccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC
Q 017052 10 VITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+++|||+++++++++ +++++.+.|+|+++||+|||++++||++|++.+.|.+ .+|.++|||++|+|+++|++++
T Consensus 1 sm~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (349)
T 4a27_A 1 SMEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVK 80 (349)
T ss_dssp CCCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCC
T ss_pred CceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCC
Confidence 368999999999965 9999999999999999999999999999999998864 5688999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
+|++||||+++. . .|+|+||+++|++.++++|
T Consensus 81 ~~~~GdrV~~~~------------------------------~------------------~G~~aey~~v~~~~~~~iP 112 (349)
T 4a27_A 81 GYEIGDRVMAFV------------------------------N------------------YNAWAEVVCTPVEFVYKIP 112 (349)
T ss_dssp SCCTTCEEEEEC------------------------------S------------------SCCSBSEEEEEGGGEEECC
T ss_pred CCCCCCEEEEec------------------------------C------------------CCcceEEEEecHHHeEECC
Confidence 999999998762 1 2599999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++.+.++ +|++++
T Consensus 113 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~ 190 (349)
T 4a27_A 113 DDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHL 190 (349)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEE
Confidence 999999999999999999999988899999999999998 99999999999999654888886 667888888 999999
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCe---------------eeccc
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE---------------VAAHY 307 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~---------------~~~~~ 307 (378)
++ + +.++.+.+++++++++|+||||+|++ .+..++++++++ |+++.+|....... ..+.+
T Consensus 191 ~~-~--~~~~~~~~~~~~~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (349)
T 4a27_A 191 FD-R--NADYVQEVKRISAEGVDIVLDCLCGD-NTGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNP 265 (349)
T ss_dssp EE-T--TSCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------CH
T ss_pred Ec-C--CccHHHHHHHhcCCCceEEEECCCch-hHHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCH
Confidence 98 4 66888899988766999999999984 558899999997 99999997542110 11222
Q ss_pred cc-cccccEEEEeeeccCCc--------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 308 GL-FLSGRTLKGSLFGGWKP--------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 308 ~~-~~~~~~i~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
.. +.++.++.++.+..+.. .++++++++++.+|+++ +.++++|+++++++|++.+++++.. |+||+++
T Consensus 266 ~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~ 343 (349)
T 4a27_A 266 IKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK--PVVDSLWALEEVKEAMQRIHDRGNIGKLILDVE 343 (349)
T ss_dssp HHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC--CCEEEEECGGGHHHHHHHHHTTCCSSEEEEETT
T ss_pred HHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc--ccccceECHHHHHHHHHHHHhCCCCceEEEecC
Confidence 22 24578888876532111 34688999999999975 4588999999999999999998887 9999987
Q ss_pred C
Q 017052 378 K 378 (378)
Q Consensus 378 ~ 378 (378)
+
T Consensus 344 ~ 344 (349)
T 4a27_A 344 K 344 (349)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-50 Score=378.84 Aligned_cols=316 Identities=18% Similarity=0.190 Sum_probs=265.7
Q ss_pred cccccceeeEEeecC---CCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEe
Q 017052 7 QPQVITCKAAVAWGA---GQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESV 78 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~---~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~v 78 (378)
.+..++|||+++.++ ++| +++++.|.|+|+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++
T Consensus 17 ~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~v 96 (363)
T 4dvj_A 17 NLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAV 96 (363)
T ss_dssp --CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEE
T ss_pred hhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEe
Confidence 456688999999877 333 9999999999999999999999999999999988865 56899999999999999
Q ss_pred CCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCc
Q 017052 79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158 (378)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 158 (378)
|+++++|++||||+..... ...|+|+||+++|++.
T Consensus 97 G~~v~~~~vGdrV~~~~~~---------------------------------------------~~~G~~aey~~v~~~~ 131 (363)
T 4dvj_A 97 GPDVTLFRPGDEVFYAGSI---------------------------------------------IRPGTNAEFHLVDERI 131 (363)
T ss_dssp CTTCCSCCTTCEEEECCCT---------------------------------------------TSCCSCBSEEEEEGGG
T ss_pred CCCCCCCCCCCEEEEccCC---------------------------------------------CCCccceEEEEeCHHH
Confidence 9999999999999875210 0125999999999999
Q ss_pred eeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCC-----CCCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhH
Q 017052 159 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADIS-----KGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKC 231 (378)
Q Consensus 159 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~-----~g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~ 231 (378)
++++|+++++++||++++++.|||+++.+.++++ +|++|||+|+ |++|++++|+|+.+ |+ +|++++++++++
T Consensus 132 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~ 210 (363)
T 4dvj_A 132 VGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQ 210 (363)
T ss_dssp CEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHH
T ss_pred eeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHH
Confidence 9999999999999999999999999998888988 8999999985 99999999999985 77 999999999999
Q ss_pred HHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccc
Q 017052 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL 311 (378)
Q Consensus 232 ~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 311 (378)
++++++|++++++++ .++.+.++++.++++|+||||+|++..+..++++++++ |+++.+|... .+++... ..
T Consensus 211 ~~~~~lGad~vi~~~---~~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~~~-~~ 282 (363)
T 4dvj_A 211 EWVKSLGAHHVIDHS---KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDPS---AFDIMLF-KR 282 (363)
T ss_dssp HHHHHTTCSEEECTT---SCHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCCS---SCCGGGG-TT
T ss_pred HHHHHcCCCEEEeCC---CCHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCCC---ccchHHH-hh
Confidence 999999999999985 36788888874449999999999877899999999997 9999996432 2333222 24
Q ss_pred cccEEEEeeeccC---C--c----CCcHHHHHHHHHcCCCCCCcceeeee---ccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 312 SGRTLKGSLFGGW---K--P----KTDLPSLVNRYLKKEFMVDEFITHNL---LFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 312 ~~~~i~g~~~~~~---~--~----~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
+++++.++..... . . .+.++++++++.+|++++. +++++ +++++++|++.+++++.. |+||++.+
T Consensus 283 k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~ 360 (363)
T 4dvj_A 283 KAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTT--LTNRLSPINAANLKQAHALVESGTARGKVVIEGFG 360 (363)
T ss_dssp TTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCC--EEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred ccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeecc--ccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence 5788877644221 0 0 1347889999999998754 56655 999999999999999887 99999863
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-50 Score=378.81 Aligned_cols=317 Identities=20% Similarity=0.285 Sum_probs=266.0
Q ss_pred ccccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCC
Q 017052 8 PQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~ 81 (378)
-.+.+|||+++.+++.+ +++++.+.|+|+++||+|||.++|||++|++.+.|.+ .+|.++|||++|+|+++|++
T Consensus 18 ~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~ 97 (354)
T 2j8z_A 18 LYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPG 97 (354)
T ss_dssp ---CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSC
T ss_pred cchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCC
Confidence 36678999999999864 8999999999999999999999999999999988865 25789999999999999999
Q ss_pred C-CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 82 V-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 82 v-~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
+ ++|++||||++.. . .|+|+||+++|++.++
T Consensus 98 v~~~~~vGdrV~~~~------------------------------~------------------~G~~aey~~v~~~~~~ 129 (354)
T 2j8z_A 98 CQGHWKIGDTAMALL------------------------------P------------------GGGQAQYVTVPEGLLM 129 (354)
T ss_dssp C--CCCTTCEEEEEC------------------------------S------------------SCCSBSEEEEEGGGEE
T ss_pred cCCCCCCCCEEEEec------------------------------C------------------CCcceeEEEeCHHHcE
Confidence 9 9999999998762 1 1599999999999999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|+
T Consensus 130 ~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~ 208 (354)
T 2j8z_A 130 PIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGA 208 (354)
T ss_dssp ECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC
T ss_pred ECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 999999999999999999999999988899999999999986 9999999999999999 89999999999999999999
Q ss_pred cEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccc-c-ccccccEE
Q 017052 240 TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-G-LFLSGRTL 316 (378)
Q Consensus 240 ~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~-~~~~~~~i 316 (378)
+.+++++ +.++.+.+.+.+.+ ++|++|||+|++ .+..++++++++ |+++.+|..... ...++. . .+.+++++
T Consensus 209 ~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~i 283 (354)
T 2j8z_A 209 AAGFNYK--KEDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALD-GRWVLYGLMGGG-DINGPLFSKLLFKRGSL 283 (354)
T ss_dssp SEEEETT--TSCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEE-EEEEECCCTTCS-CCCSCHHHHHHHTTCEE
T ss_pred cEEEecC--ChHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCC-CEEEEEeccCCC-ccCCChhHHHHhCCCEE
Confidence 9999887 56788888888876 899999999984 788999999997 999999976542 223332 2 23468899
Q ss_pred EEeeeccCCcC------C-cHHHHHHHHHcC-CCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 317 KGSLFGGWKPK------T-DLPSLVNRYLKK-EFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 317 ~g~~~~~~~~~------~-~~~~~~~~~~~~-~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
.|+.+...... + .++++++++.++ +++++++++++|+++++++||+.+++++.. |++|++++
T Consensus 284 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 354 (354)
T 2j8z_A 284 ITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELPQ 354 (354)
T ss_dssp EECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred EEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 88765432110 0 123577788888 444566789999999999999999988765 99999864
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-49 Score=369.88 Aligned_cols=310 Identities=18% Similarity=0.270 Sum_probs=260.8
Q ss_pred cccceeeEEeecCCCC--eEE-EEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCC
Q 017052 9 QVITCKAAVAWGAGQP--LVV-EEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~--~~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~ 81 (378)
.+.+|||+++.+++.+ +++ ++.+.|+|+++||+|||.++|||++|++++.|.+ .+|.++|||++|+|+++|++
T Consensus 26 ~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~ 105 (351)
T 1yb5_A 26 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDN 105 (351)
T ss_dssp --CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTT
T ss_pred CcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCC
Confidence 4567999999998865 888 7999999999999999999999999999888754 36899999999999999999
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 161 (378)
+++|++||||++.+. ..|+|+||+++|++.+++
T Consensus 106 v~~~~vGdrV~~~~~-----------------------------------------------~~G~~aey~~v~~~~~~~ 138 (351)
T 1yb5_A 106 ASAFKKGDRVFTSST-----------------------------------------------ISGGYAEYALAADHTVYK 138 (351)
T ss_dssp CTTCCTTCEEEESCC-----------------------------------------------SSCSSBSEEEEEGGGEEE
T ss_pred CCCCCCCCEEEEeCC-----------------------------------------------CCCcceeEEEECHHHeEE
Confidence 999999999987521 025999999999999999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~ 240 (378)
+|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++
T Consensus 139 ~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~ 217 (351)
T 1yb5_A 139 LPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAH 217 (351)
T ss_dssp CCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCS
T ss_pred CCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCC
Confidence 99999999999999999999999977889999999999998 9999999999999999 899999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEE
Q 017052 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKG 318 (378)
Q Consensus 241 ~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g 318 (378)
.+++++ +.++.+.+.+.+.+ ++|++||++|+ ..+..++++++++ |+++.+|... . ..++... +.+++++.|
T Consensus 218 ~~~d~~--~~~~~~~~~~~~~~~~~D~vi~~~G~-~~~~~~~~~l~~~-G~iv~~g~~~-~--~~~~~~~~~~~~~~i~g 290 (351)
T 1yb5_A 218 EVFNHR--EVNYIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG-T--IEINPRDTMAKESSIIG 290 (351)
T ss_dssp EEEETT--STTHHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS-C--EEECTHHHHTTTCEEEE
T ss_pred EEEeCC--CchHHHHHHHHcCCCCcEEEEECCCh-HHHHHHHHhccCC-CEEEEEecCC-C--CccCHHHHHhCCcEEEE
Confidence 999887 56788888888877 89999999997 5788999999997 9999999642 2 2333222 356889988
Q ss_pred eeeccCCcCCcH----HHHHHHHHcCCCCCCcceeeeeccccHHHHHHH-hhcCcee-EEEEeC
Q 017052 319 SLFGGWKPKTDL----PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNL-MKEGKCL-RSVIHM 376 (378)
Q Consensus 319 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~-l~~~~~~-kvvi~~ 376 (378)
+.+.... .+++ +.+.+++.+++++ ++++++|+++++++|++. +++++.. |+||++
T Consensus 291 ~~~~~~~-~~~~~~~~~~l~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 291 VTLFSST-KEEFQQYAAALQAGMEIGWLK--PVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp CCGGGCC-HHHHHHHHHHHHHHHHHTCCC--CCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred EEeecCC-HHHHHHHHHHHHHHHHCCCcc--CccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 7543221 1233 3455567788755 458899999999999998 6655554 999874
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-51 Score=383.23 Aligned_cols=313 Identities=14% Similarity=0.142 Sum_probs=258.8
Q ss_pred cccceeeEEee--cC---CCCeEEEEe---------ecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccc
Q 017052 9 QVITCKAAVAW--GA---GQPLVVEEV---------EVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHE 70 (378)
Q Consensus 9 ~~~~~~a~~~~--~~---~~~~~~~~~---------~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e 70 (378)
+|.+|||++++ ++ .+.+++++. +.|+|++|||+|||+++|||++|++.+.|.+ .+|.++|||
T Consensus 7 ~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E 86 (349)
T 3pi7_A 7 IPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFE 86 (349)
T ss_dssp CCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSE
T ss_pred CchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccce
Confidence 67889999999 33 334777777 9999999999999999999999999998865 478999999
Q ss_pred eeEEEEEeCCCC-CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCccccccccccee
Q 017052 71 ASGIVESVGPGV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFS 149 (378)
Q Consensus 71 ~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 149 (378)
++|+|+++|++| ++|++||||++.... ...|+|+
T Consensus 87 ~~G~V~~vG~~v~~~~~vGdrV~~~~g~---------------------------------------------~~~G~~a 121 (349)
T 3pi7_A 87 GVGTIVAGGDEPYAKSLVGKRVAFATGL---------------------------------------------SNWGSWA 121 (349)
T ss_dssp EEEEEEEECSSHHHHHHTTCEEEEECTT---------------------------------------------SSCCSSB
T ss_pred EEEEEEEECCCccCCCCCCCEEEEeccC---------------------------------------------CCCccce
Confidence 999999999999 999999999876211 0136999
Q ss_pred eEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCC-CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKG-STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 150 ~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g-~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
||+++|++.++++|+++++++||++++.++|||+++ ++++ ++| ++|||+|+ |++|++++|+|+.+|+ +|++++++
T Consensus 122 ey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~ 198 (349)
T 3pi7_A 122 EYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRR 198 (349)
T ss_dssp SEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESC
T ss_pred eeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 999999999999999999999999999999999654 6666 666 78888855 9999999999999999 99999999
Q ss_pred hhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecc
Q 017052 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306 (378)
Q Consensus 228 ~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~ 306 (378)
+++++.++++|++++++++ +.++.+.+++++++ ++|++|||+|++ .+..++++++++ |+++.+|..... ...++
T Consensus 199 ~~~~~~~~~~Ga~~~~~~~--~~~~~~~v~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~ 273 (349)
T 3pi7_A 199 DEQIALLKDIGAAHVLNEK--APDFEATLREVMKAEQPRIFLDAVTGP-LASAIFNAMPKR-ARWIIYGRLDPD-ATVIR 273 (349)
T ss_dssp GGGHHHHHHHTCSEEEETT--STTHHHHHHHHHHHHCCCEEEESSCHH-HHHHHHHHSCTT-CEEEECCCSCCS-CCCCS
T ss_pred HHHHHHHHHcCCCEEEECC--cHHHHHHHHHHhcCCCCcEEEECCCCh-hHHHHHhhhcCC-CEEEEEeccCCC-CCCCC
Confidence 9999999999999999987 67888999999887 999999999984 568899999997 999999976542 22333
Q ss_pred c--cccccccEEEEeeeccCCc------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeC
Q 017052 307 Y--GLFLSGRTLKGSLFGGWKP------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 376 (378)
Q Consensus 307 ~--~~~~~~~~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~ 376 (378)
. ..+.+++++.++....+.. .+.++++++++.++++++ .++++|+++++++||+.+.++...|+||++
T Consensus 274 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~gKvvl~p 349 (349)
T 3pi7_A 274 EPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWST--DVTAVVPLAEAIAWVPAELTKPNGKVFIRP 349 (349)
T ss_dssp CTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC---CCEEEEHHHHHHHHHHHHTSSSSCEEEEC
T ss_pred chhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCccc--ccceEEcHHHHHHHHHHHhCCCCceEEEeC
Confidence 3 2235689999887643211 245778888888998754 488999999999999966555445999974
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-49 Score=371.06 Aligned_cols=313 Identities=22% Similarity=0.307 Sum_probs=265.2
Q ss_pred ceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCC
Q 017052 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+|||+++.+++.+ +++++.|.|+|+++||+|||.++|||++|++++.|.+ .+|.++|||++|+|+++|++++
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~ 80 (333)
T 1wly_A 1 MVMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT 80 (333)
T ss_dssp -CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred CcEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence 3899999998865 8999999999999999999999999999999988754 2688999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
+|++||||+..+. ..|+|+||+++|++.++++|
T Consensus 81 ~~~~GdrV~~~~~-----------------------------------------------~~G~~aey~~v~~~~~~~iP 113 (333)
T 1wly_A 81 DFTVGERVCTCLP-----------------------------------------------PLGAYSQERLYPAEKLIKVP 113 (333)
T ss_dssp SCCTTCEEEECSS-----------------------------------------------SCCCSBSEEEEEGGGCEECC
T ss_pred CCCCCCEEEEecC-----------------------------------------------CCCcceeEEEecHHHcEeCC
Confidence 9999999976521 02599999999999999999
Q ss_pred CCCChhh--hhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc
Q 017052 164 SIAPLEK--ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240 (378)
Q Consensus 164 ~~l~~~~--aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~ 240 (378)
+++++++ ||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++
T Consensus 114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~ 192 (333)
T 1wly_A 114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCH 192 (333)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS
T ss_pred CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC
Confidence 9999999 99999999999999977889999999999997 9999999999999999 999999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-Ceeeccccccccc--cEE
Q 017052 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSG--RTL 316 (378)
Q Consensus 241 ~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~--~~i 316 (378)
.+++++ +.++.+.+.+.+.+ ++|++||++|+ ..+..++++++++ |+++.+|..... ..++.....+.++ +++
T Consensus 193 ~~~d~~--~~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i 268 (333)
T 1wly_A 193 HTINYS--TQDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASGVADPIRVVEDLGVRGSLFIT 268 (333)
T ss_dssp EEEETT--TSCHHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECCCTTCCCCCCCHHHHTTTTTSCEEE
T ss_pred EEEECC--CHHHHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEecCCCCcCCCChhHhhhhcCCcEEE
Confidence 998887 56778888888766 89999999998 7889999999997 999999976532 2222221223456 888
Q ss_pred EEeeeccCCc----CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCCC
Q 017052 317 KGSLFGGWKP----KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 317 ~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
.|+....+.. .+.++++++++.++++++ .++++|+++++++||+.+++++.. |++|+++|
T Consensus 269 ~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 333 (333)
T 1wly_A 269 RPALWHYMSNRSEIDEGSKCLFDAVKAGVLHS--SVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA 333 (333)
T ss_dssp CCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCC--CEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred EEeehhhccCHHHHHHHHHHHHHHHHCCCcCC--CcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 7765422111 135788999999999764 588999999999999999988766 99999875
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-50 Score=376.34 Aligned_cols=313 Identities=20% Similarity=0.305 Sum_probs=257.4
Q ss_pred ccccceeeEEeecCCCC---eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCC
Q 017052 8 PQVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGP 80 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~ 80 (378)
.+|.+|||+++.+++.| +++++.+.|+|+++||+|||.++|||++|++.+.|.+ .+|.++|||++|+|+++|+
T Consensus 22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~ 101 (357)
T 1zsy_A 22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS 101 (357)
T ss_dssp CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence 46678999999999986 8899999999999999999999999999999988864 3688999999999999999
Q ss_pred CCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
++++|++||||++.+. +.|+|+||+++|++.++
T Consensus 102 ~v~~~~vGdrV~~~~~-----------------------------------------------~~G~~aey~~v~~~~~~ 134 (357)
T 1zsy_A 102 NVTGLKPGDWVIPANA-----------------------------------------------GLGTWRTEAVFSEEALI 134 (357)
T ss_dssp TCCSCCTTCEEEESSS-----------------------------------------------CSCCSBSEEEEEGGGEE
T ss_pred CCCCCCCCCEEEEcCC-----------------------------------------------CCccceeEEecCHHHcE
Confidence 9999999999987621 12599999999999999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHH
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAK 235 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----~~~~~l~ 235 (378)
++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +++++.+++ ++.++++
T Consensus 135 ~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~ 213 (357)
T 1zsy_A 135 QVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLK 213 (357)
T ss_dssp EECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHH
T ss_pred ECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHH
Confidence 999999999999999999999999977889999999999998 9999999999999999 666665443 3578899
Q ss_pred hCCCcEEeCCCCCCchHHHHHHHHhCC--CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-ccc
Q 017052 236 AFGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLS 312 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~ 312 (378)
++|++++++++ ....+.+.+++.+ ++|+||||+|++. ...++++++++ |+++.+|.... ....++... +.+
T Consensus 214 ~lGa~~vi~~~---~~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~ 287 (357)
T 1zsy_A 214 SLGAEHVITEE---ELRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMAK-QPVVASVSLLIFK 287 (357)
T ss_dssp HTTCSEEEEHH---HHHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCTT-CCBCCCHHHHHHS
T ss_pred hcCCcEEEecC---cchHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCCC-CCCCCCHHHHHhc
Confidence 99999998764 1112344555544 5999999999854 46789999997 99999986543 222333322 246
Q ss_pred ccEEEEeeeccCC-------cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 313 GRTLKGSLFGGWK-------PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 313 ~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
++++.++....+. ..+.++++++++.++++++. +.++|+++++++||+.+++++.. |+||++
T Consensus 288 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 357 (357)
T 1zsy_A 288 DLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP--ACSQVPLQDYQSALEASMKPFISSKQILTM 357 (357)
T ss_dssp CCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC--CEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred CceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc--cceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 8899888654321 01346889999999998765 55899999999999999888765 999975
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-50 Score=376.38 Aligned_cols=316 Identities=17% Similarity=0.211 Sum_probs=261.0
Q ss_pred ccceeeEEeecCCCC---eEEEEeecCCCC--CCcEEEEEeEEecCcccccccccCC----CCC---------cccccce
Q 017052 10 VITCKAAVAWGAGQP---LVVEEVEVNPPQ--PEEIRIKVVCTSLCRSDITAWETQA----IFP---------RIFGHEA 71 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~---~~~~~~~~p~~~--~~evlV~v~~~~i~~~D~~~~~g~~----~~p---------~~~G~e~ 71 (378)
+++|||++++++++| +++++.+.|+|+ ++||+|||.++|||++|++.+.|.+ .+| .++|||+
T Consensus 1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~ 80 (364)
T 1gu7_A 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG 80 (364)
T ss_dssp CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence 467999999999976 899999998877 9999999999999999999988854 246 8899999
Q ss_pred eEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeE
Q 017052 72 SGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEY 151 (378)
Q Consensus 72 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~ 151 (378)
+|+|+++|+++++|++||||++.+. ..|+|+||
T Consensus 81 ~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------------------------~~G~~aey 113 (364)
T 1gu7_A 81 LFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------------------------NFGTWRTH 113 (364)
T ss_dssp EEEEEEECTTCCSCCTTCEEEESSS-----------------------------------------------CCCCSBSE
T ss_pred EEEEEEeCCCCCcCCCCCEEEecCC-----------------------------------------------CCCcchhe
Confidence 9999999999999999999987621 12599999
Q ss_pred EEEeCCceeeCCC-----------CCChhhhhhhchhhhhhHHHHHhhcCCCCC-CeEEEEcc-ChHHHHHHHHHHHcCC
Q 017052 152 TVVHSGCAVKVSS-----------IAPLEKICLLSCGLSAGLGAAWNVADISKG-STVVIFGL-GTVGLSVAQGAKARGA 218 (378)
Q Consensus 152 ~~v~~~~~~~iP~-----------~l~~~~aa~~~~~~~ta~~al~~~~~~~~g-~~VLI~Ga-g~vG~~aiqla~~~g~ 218 (378)
+++|++.++++|+ ++++++||+++++++|||+++.+.+++++| ++|||+|+ |++|++++|+|+.+|+
T Consensus 114 ~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga 193 (364)
T 1gu7_A 114 ALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF 193 (364)
T ss_dssp EEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC
T ss_pred EecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC
Confidence 9999999999998 899999999999999999999776789999 99999998 9999999999999999
Q ss_pred CeEEEEcCChhh----HHHHHhCCCcEEeCCCCC-CchHHHHHHHHh--CC-CccEEEeccCChHHHHHHHHHhccCCcc
Q 017052 219 SRIIGVDTNPEK----CEKAKAFGVTEFLNPNDN-NEPVQQVIKRIT--DG-GADYSFECIGDTGMITTALQSCCDGWGL 290 (378)
Q Consensus 219 ~~vi~v~~~~~~----~~~l~~~g~~~vi~~~~~-~~~~~~~i~~~~--~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~ 290 (378)
+++++++++++ .+.++++|+++++++++. ..++.+.+++++ ++ ++|+||||+|++... .++++++++ |+
T Consensus 194 -~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~-G~ 270 (364)
T 1gu7_A 194 -NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN-GL 270 (364)
T ss_dssp -EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT-CE
T ss_pred -EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC-CE
Confidence 88888766554 678899999999987510 156778888887 45 899999999986554 889999997 99
Q ss_pred EEEeccCCCCCeeecccccc-ccccEEEEeeeccCCc------CCcHHHHHHHHHcCCCCCCcceeeee-ccccHHHHHH
Q 017052 291 AVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKP------KTDLPSLVNRYLKKEFMVDEFITHNL-LFEDINQAFN 362 (378)
Q Consensus 291 ~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~-~l~~i~~A~~ 362 (378)
++.+|.... ....++...+ .+++++.++....+.. .++++++++++.++++++.......+ +++++++||+
T Consensus 271 ~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~ 349 (364)
T 1gu7_A 271 MLTYGGMSF-QPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQ 349 (364)
T ss_dssp EEECCCCSS-CCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHH
T ss_pred EEEecCCCC-CCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHH
Confidence 999997653 2233333332 4688998876543211 24588999999999998875543444 4569999999
Q ss_pred HhhcCcee-EEEEeC
Q 017052 363 LMKEGKCL-RSVIHM 376 (378)
Q Consensus 363 ~l~~~~~~-kvvi~~ 376 (378)
.+.+++.. |+||++
T Consensus 350 ~~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 350 DGVANSKDGKQLITY 364 (364)
T ss_dssp HHHHTGGGSCEEEEC
T ss_pred HHHhCCCCceEEEeC
Confidence 99888665 999975
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-50 Score=373.66 Aligned_cols=300 Identities=15% Similarity=0.148 Sum_probs=241.3
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE 87 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (378)
.+|||+++++..+.+++++.+.|+|+++||+|||++++||++|++.+.|.+ .+|.++|||++|+|+++|+++++|++
T Consensus 3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v 82 (315)
T 3goh_A 3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML 82 (315)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence 469999999644459999999999999999999999999999999998865 57899999999999999999999999
Q ss_pred CCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
||||++.+.. ...|+|+||+++|++.++++|++++
T Consensus 83 GdrV~~~~~~---------------------------------------------~~~G~~aey~~v~~~~~~~iP~~~~ 117 (315)
T 3goh_A 83 GRRVAYHTSL---------------------------------------------KRHGSFAEFTVLNTDRVMTLPDNLS 117 (315)
T ss_dssp TCEEEEECCT---------------------------------------------TSCCSSBSEEEEETTSEEECCTTSC
T ss_pred CCEEEEeCCC---------------------------------------------CCCcccccEEEEcHHHhccCcCCCC
Confidence 9999987311 0136999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+++||+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++ ++++.++++++|++++++
T Consensus 118 ~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~--- 191 (315)
T 3goh_A 118 FERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR--- 191 (315)
T ss_dssp HHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES---
T ss_pred HHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc---
Confidence 999999999999999999 89999999999999999999999999999999 999999 999999999999999883
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC---
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW--- 324 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~--- 324 (378)
+ .+.+ ++++|+||||+|++ .+..++++++++ |+++.+|......... . +.+.+.+....+...
T Consensus 192 -d---~~~v----~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~ 257 (315)
T 3goh_A 192 -E---PSQV----TQKYFAIFDAVNSQ-NAAALVPSLKAN-GHIICIQDRIPAPIDP--A--FTRTISYHEIALGALHDF 257 (315)
T ss_dssp -S---GGGC----CSCEEEEECC--------TTGGGEEEE-EEEEEECCC--------------CCSEEEEECGGGHHHH
T ss_pred -C---HHHh----CCCccEEEECCCch-hHHHHHHHhcCC-CEEEEEeCCCCccccc--h--hhhcceeeEEEeeccccc
Confidence 1 1222 44999999999985 457889999997 9999997654322211 1 123344443332111
Q ss_pred Cc-------CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCceeEEEEeCCC
Q 017052 325 KP-------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 378 (378)
Q Consensus 325 ~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~kvvi~~~~ 378 (378)
.. .+.++++++++.+++++ +.++++|+++++++||+.++ +...|++|+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~-~~~gKvvi~~~~ 315 (315)
T 3goh_A 258 GDRQDWQILMQQGEALLTLIAQGKME--IAAPDIFRFEQMIEALDHSE-QTKLKTVLTLNE 315 (315)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTSSC--CCCCEEEEGGGHHHHHHHHH-HHCCCEEEESCC
T ss_pred CChhHHHHHHHHHHHHHHHHHCCCcc--cccceEecHHHHHHHHHHHH-hcCCcEEEEecC
Confidence 00 12367899999999976 45789999999999999998 444599999876
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-49 Score=371.64 Aligned_cols=316 Identities=21% Similarity=0.257 Sum_probs=267.4
Q ss_pred cccccceeeEEeecCCC----CeEE-EEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEE
Q 017052 7 QPQVITCKAAVAWGAGQ----PLVV-EEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVES 77 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~----~~~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~ 77 (378)
.+.+.+|||+++++++. .+++ ++.|.|+|+++||+|||.++|||++|++.+.|.+ .+|.++|||++|+|++
T Consensus 18 ~~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~ 97 (362)
T 2c0c_A 18 LYFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVA 97 (362)
T ss_dssp HHHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEE
T ss_pred ccchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEE
Confidence 35677899999999985 3889 9999999999999999999999999999988864 4688999999999999
Q ss_pred eCCCCC-cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeC
Q 017052 78 VGPGVT-EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (378)
Q Consensus 78 vG~~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 156 (378)
+|++++ +|++||||++. . .|+|+||+++|+
T Consensus 98 vG~~V~~~~~vGdrV~~~-------------------------------~------------------~G~~aey~~v~~ 128 (362)
T 2c0c_A 98 LGLSASARYTVGQAVAYM-------------------------------A------------------PGSFAEYTVVPA 128 (362)
T ss_dssp ECTTGGGTCCTTCEEEEE-------------------------------C------------------SCCSBSEEEEEG
T ss_pred ECCCccCCCCCCCEEEEc-------------------------------c------------------CCcceeEEEEcH
Confidence 999999 99999999876 1 259999999999
Q ss_pred CceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 157 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
+.++++|++ + .++|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++
T Consensus 129 ~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~ 205 (362)
T 2c0c_A 129 SIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLK 205 (362)
T ss_dssp GGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred HHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHH
Confidence 999999996 3 4677888899999999988889999999999996 9999999999999999 8999999999999999
Q ss_pred hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC------ee---ecc
Q 017052 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP------EV---AAH 306 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~------~~---~~~ 306 (378)
++|++.+++++ +.++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|...... .+ .+.
T Consensus 206 ~~Ga~~~~~~~--~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~ 281 (362)
T 2c0c_A 206 SLGCDRPINYK--TEPVGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLP 281 (362)
T ss_dssp HTTCSEEEETT--TSCHHHHHHHHCTTCEEEEEECSCT-HHHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHH
T ss_pred HcCCcEEEecC--ChhHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccH
Confidence 99999999887 5567778887765589999999998 6889999999997 9999998754321 00 122
Q ss_pred ccccccccEEEEeeeccCC--cCCcHHHHHHHHHcCCCCCCcc------eeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 307 YGLFLSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKEFMVDEF------ITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 307 ~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~------i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
...+.+++++.|+....+. ..++++++++++.++++++... +.+.++++++++|++.+++++.. |+||+++
T Consensus 282 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 361 (362)
T 2c0c_A 282 AKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361 (362)
T ss_dssp HHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECC
T ss_pred HHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcC
Confidence 2233568899888654332 1246889999999999876533 23568999999999999988765 9999987
Q ss_pred C
Q 017052 378 K 378 (378)
Q Consensus 378 ~ 378 (378)
|
T Consensus 362 ~ 362 (362)
T 2c0c_A 362 H 362 (362)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-49 Score=364.55 Aligned_cols=310 Identities=19% Similarity=0.212 Sum_probs=261.2
Q ss_pred ceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCC
Q 017052 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
+|||+++.+++.| +++++.+.|+|+++||+|||.+++||++|++.+.|.+ .+|.++|||++|+|+++|+++++|+
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (327)
T 1qor_A 1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIK 80 (327)
T ss_dssp -CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 3899999998865 8899999999999999999999999999999988854 3689999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+|||| +.... . .|+|+||+++|++.++++|+++
T Consensus 81 ~GdrV-~~~g~----------------------------~------------------~G~~aey~~v~~~~~~~iP~~l 113 (327)
T 1qor_A 81 AGDRV-VYAQS----------------------------A------------------LGAYSSVHNIIADKAAILPAAI 113 (327)
T ss_dssp TTCEE-EESCC----------------------------S------------------SCCSBSEEEEEGGGEEECCTTS
T ss_pred CCCEE-EECCC----------------------------C------------------CceeeeEEEecHHHcEECCCCC
Confidence 99999 43100 0 2599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.++++
T Consensus 114 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~ 192 (327)
T 1qor_A 114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINY 192 (327)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEEC
Confidence 999999999999999999977889999999999996 9999999999999999 99999999999999999999999888
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-Ceeecccccccc-ccEEEEeeec
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLS-GRTLKGSLFG 322 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~-~~~i~g~~~~ 322 (378)
+ +.++.+.+.+.+.+ ++|++||++| ...+..++++++++ |+++.+|..... ..++.... +.+ .+++.+....
T Consensus 193 ~--~~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 267 (327)
T 1qor_A 193 R--EEDLVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNSSGAVTGVNLGIL-NQKGSLYVTRPSLQ 267 (327)
T ss_dssp T--TSCHHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCTTCCCCCBCTHHH-HHTTSCEEECCCHH
T ss_pred C--CccHHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecCCCCCCccCHHHH-hhccceEEEccchh
Confidence 7 56778888888766 8999999999 47889999999997 999999976542 12332222 234 5666544321
Q ss_pred cCC-----cCCcHHHHHHHHHcCCCCCCccee--eeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 323 GWK-----PKTDLPSLVNRYLKKEFMVDEFIT--HNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 323 ~~~-----~~~~~~~~~~~~~~~~~~~~~~i~--~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
.+. ..+.++++++++.++++++ .++ ++|+++++++|++.+++++.. |++|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~g~l~~--~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 327 (327)
T 1qor_A 268 GYITTREELTEASNELFSLIASGVIKV--DVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_dssp HHCCSHHHHHHHHHHHHHHHHTTSSCC--CCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred hhcCCHHHHHHHHHHHHHHHHCCCccc--ccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 111 1234788999999999865 477 899999999999999988765 999864
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-50 Score=370.45 Aligned_cols=309 Identities=16% Similarity=0.165 Sum_probs=257.6
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||++++++++| +++++.+.|+|+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++| +++|+
T Consensus 1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~ 78 (324)
T 3nx4_A 1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH 78 (324)
T ss_dssp CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence 899999999987 8899999999999999999999999999999998865 468999999999999999 57899
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||++.+ |. .|. ...|+|+||+++|++.++++|+++
T Consensus 79 vGdrV~~~~---~~--------------------~g~-------------------~~~G~~aey~~v~~~~~~~iP~~~ 116 (324)
T 3nx4_A 79 AGQEVLLTG---WG--------------------VGE-------------------NHWGGLAERARVKGDWLVALPAGL 116 (324)
T ss_dssp TTCEEEEEC---TT--------------------BTT-------------------TBCCSSBSEEEECGGGCEECCTTC
T ss_pred CCCEEEEcc---cc--------------------cCC-------------------CCCCceeeEEecCHHHcEECCCCC
Confidence 999999763 10 011 123699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHH--hhcCCCCCC-eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE
Q 017052 167 PLEKICLLSCGLSAGLGAAW--NVADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~--~~~~~~~g~-~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v 242 (378)
++++||++++.+.|||++|. .+.++++++ +|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++++
T Consensus 117 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v 195 (324)
T 3nx4_A 117 SSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRI 195 (324)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEE
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEE
Confidence 99999999999999999875 445677643 4999998 9999999999999999 99999999999999999999999
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeee
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLF 321 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 321 (378)
+++++ .+. +++++.+++|++|||+|+ ..+..++++++++ |+++.+|.... ....+.... +.+++++.++..
T Consensus 196 i~~~~--~~~---~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~g~~~ 267 (324)
T 3nx4_A 196 LSRDE--FAE---SRPLEKQLWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGG-FALPTTVMPFILRNVRLQGVDS 267 (324)
T ss_dssp EEGGG--SSC---CCSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTC-SEEEEESHHHHHHCCEEEECCS
T ss_pred EecCC--HHH---HHhhcCCCccEEEECCCc-HHHHHHHHHHhcC-CEEEEEecCCC-CCCCCCHHHHhhcCeEEEEEec
Confidence 98863 222 445555689999999998 4889999999997 99999998765 233333322 356899998865
Q ss_pred ccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 322 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
..... .+.++++++++.++++++ . +++|+++++++||+.+++++.. |+||+++
T Consensus 268 ~~~~~~~~~~~~~~~~~l~~~g~l~~--~-~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 268 VMTPPARRAEAWARLVKDLPESFYAQ--A-ATEITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp TTCCHHHHHHHHHHHHHHSCHHHHHH--H-EEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred cccChHHHHHHHHHHHHHHHcCCCCC--C-ceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 43211 134778888888888654 3 7999999999999999999886 9999875
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-48 Score=359.16 Aligned_cols=306 Identities=19% Similarity=0.186 Sum_probs=261.3
Q ss_pred cceeeEEeec------CCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccc----eeEEEEEe
Q 017052 11 ITCKAAVAWG------AGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHE----ASGIVESV 78 (378)
Q Consensus 11 ~~~~a~~~~~------~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e----~~G~V~~v 78 (378)
++||||++.+ ..+.+++++.|.|+|++|||+|||++++||++|+..+.+.. .+|.++||| ++|+|++.
T Consensus 6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~~~p~~~G~e~g~~~~G~V~~~ 85 (336)
T 4b7c_A 6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVLVS 85 (336)
T ss_dssp CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCSSCCCCTTSBCCCEEEEEEEEE
T ss_pred ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccccCCCCCCCcccCCceEEEEEec
Confidence 5799999986 12349999999999999999999999999999988776543 568888888 79999995
Q ss_pred CCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCc
Q 017052 79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158 (378)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 158 (378)
++++|++||||++. |+|+||+++|++.
T Consensus 86 --~v~~~~vGdrV~~~---------------------------------------------------G~~aey~~v~~~~ 112 (336)
T 4b7c_A 86 --KHPGFQAGDYVNGA---------------------------------------------------LGVQDYFIGEPKG 112 (336)
T ss_dssp --CSTTCCTTCEEEEE---------------------------------------------------CCSBSEEEECCTT
T ss_pred --CCCCCCCCCEEecc---------------------------------------------------CCceEEEEechHH
Confidence 48899999999865 5999999999999
Q ss_pred eeeCCCCCChhhh--hhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-
Q 017052 159 AVKVSSIAPLEKI--CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA- 234 (378)
Q Consensus 159 ~~~iP~~l~~~~a--a~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l- 234 (378)
++++|++++++++ |+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.+
T Consensus 113 ~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~ 191 (336)
T 4b7c_A 113 FYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLV 191 (336)
T ss_dssp CEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred eEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 9999999988876 7899999999999988999999999999998 9999999999999999 999999999999999
Q ss_pred HhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-----Ceeeccccc
Q 017052 235 KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-----PEVAAHYGL 309 (378)
Q Consensus 235 ~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~ 309 (378)
+++|++++++++ +.++.+.+.+.+++++|++||++|+ ..+..++++++++ |+++.+|..... ....+....
T Consensus 192 ~~~g~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~ 267 (336)
T 4b7c_A 192 EELGFDGAIDYK--NEDLAAGLKRECPKGIDVFFDNVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANYLS 267 (336)
T ss_dssp HTTCCSEEEETT--TSCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTTTTH
T ss_pred HHcCCCEEEECC--CHHHHHHHHHhcCCCceEEEECCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchhHHH
Confidence 899999999887 5778888998886699999999997 6889999999997 999999876521 111222222
Q ss_pred -cccccEEEEeeeccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 310 -FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 310 -~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+.+++++.++....+.. .+.++++++++.++++++. +..+++++++++||+.+++++.. |+||++
T Consensus 268 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 336 (336)
T 4b7c_A 268 LLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSR--EDIVEGLETFPETLLKLFSGENFGKLVLKV 336 (336)
T ss_dssp HHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCC--EEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccc--eeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 25688999887654321 2467899999999998877 44568999999999999998876 999975
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=362.30 Aligned_cols=315 Identities=20% Similarity=0.252 Sum_probs=254.7
Q ss_pred ccccccceeeEEeecCCCC--eEE-EEeecCCC-CCCcEEEEEeEEecCcccccccccCC------------------CC
Q 017052 6 KQPQVITCKAAVAWGAGQP--LVV-EEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------------------IF 63 (378)
Q Consensus 6 ~~~~~~~~~a~~~~~~~~~--~~~-~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~------------------~~ 63 (378)
+++++.+|||+++.+++.+ +++ ++.+.|.+ +++||+|||.++|||++|++.+.|.. .+
T Consensus 15 ~~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 94 (375)
T 2vn8_A 15 TENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEF 94 (375)
T ss_dssp ---CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTC
T ss_pred ccccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccC
Confidence 4567788999999999865 888 89999985 99999999999999999999887741 27
Q ss_pred CcccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccc
Q 017052 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYC 143 (378)
Q Consensus 64 p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~ 143 (378)
|.++|||++|+|+++|+++++|++||||++.+.. .
T Consensus 95 P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~---------------------------------------------~ 129 (375)
T 2vn8_A 95 PLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP---------------------------------------------W 129 (375)
T ss_dssp SBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCT---------------------------------------------T
T ss_pred CcccceeeeEEEEEeCCCCCCCCCCCEEEEecCC---------------------------------------------C
Confidence 8999999999999999999999999999886311 0
Q ss_pred cccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcC----CCCCCeEEEEcc-ChHHHHHHHHHHHcCC
Q 017052 144 AVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD----ISKGSTVVIFGL-GTVGLSVAQGAKARGA 218 (378)
Q Consensus 144 ~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~----~~~g~~VLI~Ga-g~vG~~aiqla~~~g~ 218 (378)
..|+|+||+++|++.++++|+++++++||+++++++|||+++.+.++ +++|++|||+|+ |++|++++|+|+.+|+
T Consensus 130 ~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga 209 (375)
T 2vn8_A 130 KQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA 209 (375)
T ss_dssp SCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC
Confidence 12599999999999999999999999999999999999999977888 999999999996 9999999999999999
Q ss_pred CeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh-HHHHHHHHHhccCCccEEEeccC
Q 017052 219 SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 219 ~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+|++++ ++++++.++++|++.+++++ +.++.+.+.+. +++|++|||+|++ ..+..++++++++ |+++.+|..
T Consensus 210 -~Vi~~~-~~~~~~~~~~lGa~~v~~~~--~~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~ 282 (375)
T 2vn8_A 210 -HVTAVC-SQDASELVRKLGADDVIDYK--SGSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTP 282 (375)
T ss_dssp -EEEEEE-CGGGHHHHHHTTCSEEEETT--SSCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCS
T ss_pred -EEEEEe-ChHHHHHHHHcCCCEEEECC--chHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCC
Confidence 899987 67889999999999999887 45666666543 4899999999986 4567888899997 999999865
Q ss_pred CCCCe----eeccc-----cccc-------cccEEEEeeeccCCcCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHH
Q 017052 298 KLKPE----VAAHY-----GLFL-------SGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAF 361 (378)
Q Consensus 298 ~~~~~----~~~~~-----~~~~-------~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~ 361 (378)
..... +.... ..+. .+..+..... ....+.++++++++.+|+++ +.++++|+++++++||
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~ 358 (375)
T 2vn8_A 283 FLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIEQTFPFSKVPEAF 358 (375)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEEEEEEGGGHHHHH
T ss_pred cccccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcCeEECHHHHHHHH
Confidence 32100 00000 0001 2333322211 11124578999999999975 4588999999999999
Q ss_pred HHhhcCcee-EEEEeC
Q 017052 362 NLMKEGKCL-RSVIHM 376 (378)
Q Consensus 362 ~~l~~~~~~-kvvi~~ 376 (378)
+.+++++.. |+||++
T Consensus 359 ~~~~~~~~~gKvvi~~ 374 (375)
T 2vn8_A 359 LKVERGHARGKTVINV 374 (375)
T ss_dssp HHHHHCCCSSEEEEEC
T ss_pred HHHHcCCCCCeEEEEe
Confidence 999988765 999986
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=352.38 Aligned_cols=311 Identities=16% Similarity=0.210 Sum_probs=260.9
Q ss_pred cccceeeEEe-ecC---CC----CeEEEEeecCCC-CCCcEEEEEeEEecCccccccccc----CC----CCCcccccce
Q 017052 9 QVITCKAAVA-WGA---GQ----PLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWET----QA----IFPRIFGHEA 71 (378)
Q Consensus 9 ~~~~~~a~~~-~~~---~~----~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g----~~----~~p~~~G~e~ 71 (378)
+|++|||+++ .++ |. .+++++.+.|+| +++||+|||.++|||++|++.+.+ .+ .+|.++|||+
T Consensus 5 ~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~ 84 (357)
T 2zb4_A 5 AAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGG 84 (357)
T ss_dssp -CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEE
T ss_pred ccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccE
Confidence 5788999999 565 43 399999999998 999999999999999999887664 22 4578999999
Q ss_pred eEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeE
Q 017052 72 SGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEY 151 (378)
Q Consensus 72 ~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~ 151 (378)
+|+|++ +++++|++||||++. .|+|+||
T Consensus 85 ~G~V~~--~~v~~~~vGdrV~~~--------------------------------------------------~G~~aey 112 (357)
T 2zb4_A 85 IGIIEE--SKHTNLTKGDFVTSF--------------------------------------------------YWPWQTK 112 (357)
T ss_dssp EEEEEE--ECSTTCCTTCEEEEE--------------------------------------------------EEESBSE
T ss_pred EEEEEe--cCCCCCCCCCEEEec--------------------------------------------------CCCcEEE
Confidence 999999 889999999999876 1589999
Q ss_pred EEEeCCceeeCCCCC-----ChhhhhhhchhhhhhHHHHHhhcCCCCC--CeEEEEcc-ChHHHHHHHHHHHcCCCeEEE
Q 017052 152 TVVHSGCAVKVSSIA-----PLEKICLLSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIG 223 (378)
Q Consensus 152 ~~v~~~~~~~iP~~l-----~~~~aa~~~~~~~ta~~al~~~~~~~~g--~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~ 223 (378)
+++|++.++++|+++ +++ +|+++++++|||+++.+.+++++| ++|||+|+ |++|++++|+|+..|+.+|++
T Consensus 113 ~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~ 191 (357)
T 2zb4_A 113 VILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVG 191 (357)
T ss_dssp EEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEE
T ss_pred EEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEE
Confidence 999999999999999 555 778889999999999888999999 99999998 999999999999999878999
Q ss_pred EcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-C
Q 017052 224 VDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-P 301 (378)
Q Consensus 224 v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~ 301 (378)
+++++++.+.+++ +|++.+++++ +.++.+.+.+.+.+++|++||++|+ ..+..++++++++ |+++.+|..... .
T Consensus 192 ~~~~~~~~~~~~~~~g~~~~~d~~--~~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~ 267 (357)
T 2zb4_A 192 ICGTHEKCILLTSELGFDAAINYK--KDNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQISQYNK 267 (357)
T ss_dssp EESCHHHHHHHHHTSCCSEEEETT--TSCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGGGTTS
T ss_pred EeCCHHHHHHHHHHcCCceEEecC--chHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCcccccc
Confidence 9999999998887 9999999887 5678888888776689999999997 7889999999997 999999876432 1
Q ss_pred eeecc--------ccccccccEEEEeeeccCC--cCCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-
Q 017052 302 EVAAH--------YGLFLSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL- 370 (378)
Q Consensus 302 ~~~~~--------~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~- 370 (378)
.+++. ...+.+++++.++....+. ..++++++++++.++++++. +..+|+++++++||+.+++++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~g 345 (357)
T 2zb4_A 268 DVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK--ETVINGLENMGAAFQSMMTGGNIG 345 (357)
T ss_dssp CCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC--EEEEECGGGHHHHHHHHHTTCCSB
T ss_pred CccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc--cceecCHHHHHHHHHHHHcCCCCc
Confidence 23322 1223568889887653321 13458899999999998876 34669999999999999988765
Q ss_pred EEEEeCCC
Q 017052 371 RSVIHMPK 378 (378)
Q Consensus 371 kvvi~~~~ 378 (378)
|+||++++
T Consensus 346 Kvvi~~~~ 353 (357)
T 2zb4_A 346 KQIVCISE 353 (357)
T ss_dssp EEEEECCC
T ss_pred eEEEEEec
Confidence 99999864
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-48 Score=357.85 Aligned_cols=314 Identities=18% Similarity=0.215 Sum_probs=250.4
Q ss_pred ccceeeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCC
Q 017052 10 VITCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 10 ~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+.+|||+++++++. .+++++.|.|+|+++||+|||+++|||++|++.+.|.. .+|.++|||++|+|+++| ++
T Consensus 2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~~--v~ 79 (330)
T 1tt7_A 2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSN--DP 79 (330)
T ss_dssp CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEECS--ST
T ss_pred CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEcC--CC
Confidence 45699999999873 48999999999999999999999999999999988854 468899999999999974 67
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
+|++||||++.+.. .|. ...|+|+||+++|++.++++|
T Consensus 80 ~~~vGdrV~~~~~~-----------------------~g~-------------------~~~G~~aey~~v~~~~~~~iP 117 (330)
T 1tt7_A 80 RFAEGDEVIATSYE-----------------------LGV-------------------SRDGGLSEYASVPGDWLVPLP 117 (330)
T ss_dssp TCCTTCEEEEESTT-----------------------BTT-------------------TBCCSSBSSEEECGGGEEECC
T ss_pred CCCCCCEEEEcccc-----------------------cCC-------------------CCCccceeEEEecHHHeEECC
Confidence 89999999876210 010 013699999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHH--hhcCCCCCC-eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAW--NVADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~--~~~~~~~g~-~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
+++++++||.+++++.|||.++. +++++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|+
T Consensus 118 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa 196 (330)
T 1tt7_A 118 QNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGA 196 (330)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTC
T ss_pred CCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999999999998874 456789996 9999998 9999999999999999 79999999999999999999
Q ss_pred cEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEE
Q 017052 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKG 318 (378)
Q Consensus 240 ~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g 318 (378)
++++++++ .+ .+.+++++.+++|++|||+|+ ..+..++++++++ |+++.+|.... ....++... +.+++++.|
T Consensus 197 ~~v~~~~~--~~-~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g 270 (330)
T 1tt7_A 197 SEVISRED--VY-DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGG-GEVPATVYPFILRGVSLLG 270 (330)
T ss_dssp SEEEEHHH--HC-SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSC-SCEEECSHHHHTSCCEEEE
T ss_pred cEEEECCC--ch-HHHHHHhhcCCccEEEECCcH-HHHHHHHHhhcCC-CEEEEEecCCC-CccCcchHHHHhcCeEEEE
Confidence 99987641 11 112233344489999999998 6889999999997 99999998654 223333222 356889988
Q ss_pred eeeccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 319 SLFGGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 319 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+....... .+.++++++++.+++++ +.++++|+++++++||+.+++++.. |+||++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 271 IDSVYCPMDVRAAVWERMSSDLKPDQLL--TIVDREVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp CCSSSCCHHHHHHHHHHTTTTSCCSCST--TSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred EeccccCHHHHHHHHHHHHHHHhcCCcc--cccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 74322110 12344555555567654 4578999999999999999888765 999864
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-47 Score=359.82 Aligned_cols=310 Identities=14% Similarity=0.175 Sum_probs=253.6
Q ss_pred ccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccC-----------------------------
Q 017052 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------------------------- 60 (378)
Q Consensus 10 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~----------------------------- 60 (378)
+..|||++.......+++++.+.|+|+++||+|||++++||++|++.+.|.
T Consensus 5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~ 84 (379)
T 3iup_A 5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM 84 (379)
T ss_dssp EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence 467999988755556999999999999999999999999999999988773
Q ss_pred ---CCCCcccccceeEEEEEeCCCC-CcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccC
Q 017052 61 ---AIFPRIFGHEASGIVESVGPGV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKG 136 (378)
Q Consensus 61 ---~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~ 136 (378)
..+|.++|||++|+|+++|++| ++|++||||++. .
T Consensus 85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~-------------------------------~---------- 123 (379)
T 3iup_A 85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI-------------------------------G---------- 123 (379)
T ss_dssp GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC-------------------------------C----------
T ss_pred ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec-------------------------------C----------
Confidence 1357899999999999999999 899999999876 1
Q ss_pred CcccccccccceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE--ccChHHHHHHHHHH
Q 017052 137 KPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF--GLGTVGLSVAQGAK 214 (378)
Q Consensus 137 ~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~--Gag~vG~~aiqla~ 214 (378)
.|+|+||+++|++.++++|+++++++||++++..+|||+++ +... ++|++|||+ |+|++|++++|+|+
T Consensus 124 --------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~ 193 (379)
T 3iup_A 124 --------GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICL 193 (379)
T ss_dssp --------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHH
T ss_pred --------CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHH
Confidence 25999999999999999999999999999999999999876 5555 899999999 45999999999999
Q ss_pred HcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhc-----cC-
Q 017052 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCC-----DG- 287 (378)
Q Consensus 215 ~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~-----~~- 287 (378)
.+|+ +|++++++++++++++++|++++++++ +.++.+.+++++++ ++|+||||+|++..+..++++++ ++
T Consensus 194 ~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~--~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G 270 (379)
T 3iup_A 194 KDGI-KLVNIVRKQEQADLLKAQGAVHVCNAA--SPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAR 270 (379)
T ss_dssp HHTC-CEEEEESSHHHHHHHHHTTCSCEEETT--STTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCC
T ss_pred HCCC-EEEEEECCHHHHHHHHhCCCcEEEeCC--ChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhcccc
Confidence 9999 899999999999999999999999987 67889999999888 99999999998777788888885 33
Q ss_pred ---------CccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc---CCc----HHHHHHHHHcCCCCCCcceeee
Q 017052 288 ---------WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP---KTD----LPSLVNRYLKKEFMVDEFITHN 351 (378)
Q Consensus 288 ---------~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~i~~~ 351 (378)
.|+++.+|.... ..+++.. .+.+++++.|+.+..+.. .++ ++++++++.+ . +.+.++++
T Consensus 271 ~~~~~G~~~~g~iv~~G~~~~-~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--l~~~i~~~ 345 (379)
T 3iup_A 271 EYSRYGSTTHKQVYLYGGLDT-SPTEFNR-NFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-T--FASHYSKE 345 (379)
T ss_dssp SCCTTCCCSCEEEEECCCSEE-EEEEECC-CSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-T--TCCCCSEE
T ss_pred ceeecccccCceEEEecCCCC-Ccccccc-ccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-c--CCCcceEE
Confidence 044445444332 2233332 235688888886654311 122 3445555555 3 45567899
Q ss_pred eccccH--HHHHHHhhcCcee-EEEEeCCC
Q 017052 352 LLFEDI--NQAFNLMKEGKCL-RSVIHMPK 378 (378)
Q Consensus 352 ~~l~~i--~~A~~~l~~~~~~-kvvi~~~~ 378 (378)
|+++++ ++||+.+.+++.. |+||++++
T Consensus 346 ~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~ 375 (379)
T 3iup_A 346 ISLAEVLDLDMIAVYNKRATGEKYLINPNK 375 (379)
T ss_dssp EEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred ecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence 999999 9999999998776 99999863
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-47 Score=351.78 Aligned_cols=311 Identities=18% Similarity=0.209 Sum_probs=245.4
Q ss_pred ceeeEEeecCCC--CeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcC
Q 017052 12 TCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 12 ~~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
+|||+++++++. .+++++.|.|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++ ++++|
T Consensus 3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~ 80 (328)
T 1xa0_A 3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF 80 (328)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence 699999999884 38899999999999999999999999999999988753 46899999999999996 46889
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||||++.... .|. ...|+|+||+++|++.++++|++
T Consensus 81 ~vGdrV~~~~~~-----------------------~g~-------------------~~~G~~aey~~v~~~~~~~~P~~ 118 (328)
T 1xa0_A 81 REGDEVIATGYE-----------------------IGV-------------------THFGGYSEYARLHGEWLVPLPKG 118 (328)
T ss_dssp CTTCEEEEESTT-----------------------BTT-------------------TBCCSSBSEEEECGGGCEECCTT
T ss_pred CCCCEEEEcccc-----------------------CCC-------------------CCCccceeEEEechHHeEECCCC
Confidence 999999876210 010 01369999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHH--hhcCCCCCC-eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 166 APLEKICLLSCGLSAGLGAAW--NVADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~--~~~~~~~g~-~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+++++||++++++.|||.++. +++++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|+++
T Consensus 119 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~ 197 (328)
T 1xa0_A 119 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE 197 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcE
Confidence 999999999999999998874 456789996 9999998 9999999999999999 8999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEee
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL 320 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 320 (378)
++++++ .+ .+.+++++.+++|++|||+|+ ..+..++++++++ |+++.+|.... ....++... +.+++++.|+.
T Consensus 198 ~i~~~~--~~-~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~g~~ 271 (328)
T 1xa0_A 198 VLARED--VM-AERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGG-AEVPTTVHPFILRGVSLLGID 271 (328)
T ss_dssp EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSS-SCCCCCSHHHHHTTCEEEECC
T ss_pred EEecCC--cH-HHHHHHhcCCcccEEEECCcH-HHHHHHHHhhccC-CEEEEEeecCC-CCCCCchhhhhhcCceEEEEe
Confidence 998762 22 334555554589999999998 5889999999997 99999997653 222333222 35688998874
Q ss_pred eccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 321 FGGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 321 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
...... .+.++++++++.++ ++ + +.++|+++++++||+.+++++.. |++|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~g-l~--~-~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 328 (328)
T 1xa0_A 272 SVYCPMDLRLRIWERLAGDLKPD-LE--R-IAQEISLAELPQALKRILRGELRGRTVVRLA 328 (328)
T ss_dssp SSSCCHHHHHHHHHHHHTTTCCC-HH--H-HEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHHHHcC-Cc--e-eeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence 322110 12234455544455 43 3 36899999999999999888765 9999874
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=339.10 Aligned_cols=290 Identities=19% Similarity=0.221 Sum_probs=242.3
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||+++.+++++..+++.|.|+|+++||+|||+++|||++|++.+.|.+ .+|.++|||++|+|+ |
T Consensus 1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G 69 (302)
T 1iz0_A 1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G 69 (302)
T ss_dssp CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence 8999999999876677999999999999999999999999999988854 368899999999998 9
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|||++.+. .|+|+||+++|++.++++|+++++
T Consensus 70 drV~~~~~------------------------------------------------~G~~aey~~v~~~~~~~iP~~~~~ 101 (302)
T 1iz0_A 70 RRYAALVP------------------------------------------------QGGLAERVAVPKGALLPLPEGLSP 101 (302)
T ss_dssp EEEEEECS------------------------------------------------SCCSBSEEEEEGGGCEECCTTCCH
T ss_pred cEEEEecC------------------------------------------------CcceeeEEEEcHHHcEeCCCCCCH
Confidence 99987621 259999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
++||+++++++|||+++.+.. +++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++++
T Consensus 102 ~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~- 178 (302)
T 1iz0_A 102 EEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYA- 178 (302)
T ss_dssp HHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGG-
T ss_pred HHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECC-
Confidence 999999999999999997677 999999999998 9999999999999999 999999999999999999999998875
Q ss_pred CC-chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccC-
Q 017052 248 NN-EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGW- 324 (378)
Q Consensus 248 ~~-~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~- 324 (378)
+ .++.+.+ +++|++|| +|+ ..+..++++++++ |+++.+|...... ..++.. .+.+++++.|+.+..+
T Consensus 179 -~~~~~~~~~-----~~~d~vid-~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~ 248 (302)
T 1iz0_A 179 -EVPERAKAW-----GGLDLVLE-VRG-KEVEESLGLLAHG-GRLVYIGAAEGEV-APIPPLRLMRRNLAVLGFWLTPLL 248 (302)
T ss_dssp -GHHHHHHHT-----TSEEEEEE-CSC-TTHHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHHHT
T ss_pred -cchhHHHHh-----cCceEEEE-CCH-HHHHHHHHhhccC-CEEEEEeCCCCCC-CCcCHHHHHhCCCeEEEEeccchh
Confidence 3 4444443 48999999 998 6889999999997 9999998765421 122222 2356889988865422
Q ss_pred CcCCcHHHHHH---HHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 325 KPKTDLPSLVN---RYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 325 ~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
...++++++++ ++.+++++ +.++++|+++++++|++.+++++.. |+++++
T Consensus 249 ~~~~~~~~~~~~~~l~~~g~l~--~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 249 REGALVEEALGFLLPRLGRELR--PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302 (302)
T ss_dssp TCHHHHHHHHHHHGGGBTTTBC--CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred hhHHHHHHHHhhhHHHHcCCcc--cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 11346888889 99899875 4588999999999999999988765 999874
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-46 Score=378.41 Aligned_cols=305 Identities=17% Similarity=0.217 Sum_probs=260.5
Q ss_pred eeeEEeecCCCC--eEEEEeec--CCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEV--NPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~--p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
...+.+.++|.+ +++++.+. |+|+++||+|||.++|||++|++++.|.++.|.++|||++|+|+++|++|++|++|
T Consensus 210 ~~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~~~~~lG~E~aG~V~~vG~~V~~~~vG 289 (795)
T 3slk_A 210 GWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGVASLGSEGAGVVVETGPGVTGLAPG 289 (795)
T ss_dssp SCCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCSSCCCSCCCEEEEEEEECSSCCSSCTT
T ss_pred eEEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCCCCccccceeEEEEEEeCCCCCcCCCC
Confidence 345667777765 88877764 57899999999999999999999999987777889999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|||++. . .|+|+||++++++.++++|+++++
T Consensus 290 DrV~~~-------------------------------~------------------~G~~ae~~~v~~~~~~~iP~~ls~ 320 (795)
T 3slk_A 290 DRVMGM-------------------------------I------------------PKAFGPLAVADHRMVTRIPAGWSF 320 (795)
T ss_dssp CEEEEC-------------------------------C------------------SSCSSSEEEEETTSEEECCTTCCH
T ss_pred CEEEEE-------------------------------e------------------cCCCcCEEEeehHHEEECCCCCCH
Confidence 999876 2 248999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
++||++++.++|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|+++++++ |.+.++ +|++++++++
T Consensus 321 ~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~- 396 (795)
T 3slk_A 321 ARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSR- 396 (795)
T ss_dssp HHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSS-
T ss_pred HHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecC-
Confidence 9999999999999999988899999999999997 9999999999999999 899998765 666666 9999999987
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
+.++.+.+++.+++ ++|+|||++|+ +.+..++++++++ |+++.+|.........+.. ..+++++.+..+.....
T Consensus 397 -~~~~~~~i~~~t~g~GvDvVld~~gg-~~~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~ 471 (795)
T 3slk_A 397 -TCDFEQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRG-GRFLELGKTDVRDPVEVAD--AHPGVSYQAFDTVEAGP 471 (795)
T ss_dssp -SSTHHHHHHHHSCSSCCSEEEECCCT-TTTHHHHTSCTTC-EEEEECCSTTCCCHHHHHH--HSSSEEEEECCGGGGHH
T ss_pred -ChhHHHHHHHHcCCCCeEEEEECCCc-HHHHHHHHHhcCC-CEEEEeccccccCcccccc--cCCCCEEEEeeccccCH
Confidence 67899999999998 99999999998 6789999999997 9999999765433322222 13566666654422111
Q ss_pred ---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 327 ---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 327 ---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
.+.+.++++++.++++++ .+.++|+++++++||+.+++++.. |+||+++
T Consensus 472 ~~~~~~l~~~~~l~~~g~l~p--~~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~ 524 (795)
T 3slk_A 472 QRIGEMLHELVELFEGRVLEP--LPVTAWDVRQAPEALRHLSQARHVGKLVLTMP 524 (795)
T ss_dssp HHHHHHHHHHHHHHHTTSCCC--CCEEEEEGGGHHHHHHHHHHTCCCBEEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCcCC--CcceeEcHHHHHHHHHHHhcCCccceEEEecC
Confidence 245788999999999765 478999999999999999999887 9999876
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-44 Score=331.27 Aligned_cols=307 Identities=19% Similarity=0.233 Sum_probs=251.5
Q ss_pred ccceeeEEeecC--C----CCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCC
Q 017052 10 VITCKAAVAWGA--G----QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 10 ~~~~~a~~~~~~--~----~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+++|||+++.+. | +.+++++.+.|+|++|||+|||.++|||+.|.. +.....+|.++|||++|+|++. .++
T Consensus 5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~~~~~p~~~g~e~~G~Vv~~--~v~ 81 (333)
T 1v3u_A 5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-ASKRLKEGAVMMGQQVARVVES--KNS 81 (333)
T ss_dssp CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HTTTCCTTSBCCCCEEEEEEEE--SCT
T ss_pred cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHcc-ccCcCCCCcccccceEEEEEec--CCC
Confidence 568999999985 3 238999999999999999999999999998873 2222256788999999999995 578
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
+|++||||++. |+|+||+++|.+.++++|
T Consensus 82 ~~~vGdrV~~~---------------------------------------------------g~~aey~~v~~~~~~~iP 110 (333)
T 1v3u_A 82 AFPAGSIVLAQ---------------------------------------------------SGWTTHFISDGKGLEKLL 110 (333)
T ss_dssp TSCTTCEEEEC---------------------------------------------------CCSBSEEEESSTTEEECC
T ss_pred CCCCCCEEEec---------------------------------------------------CceEEEEEechHHeEEcC
Confidence 89999999865 589999999999999999
Q ss_pred CC----CChhh-hhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 164 SI----APLEK-ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 164 ~~----l~~~~-aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
++ +++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++
T Consensus 111 ~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~ 189 (333)
T 1v3u_A 111 TEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQI 189 (333)
T ss_dssp --CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT
T ss_pred cccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc
Confidence 97 88888 48899999999999988889999999999998 9999999999999999 999999999999999999
Q ss_pred CCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCC----eee-ccc-cccc
Q 017052 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP----EVA-AHY-GLFL 311 (378)
Q Consensus 238 g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~----~~~-~~~-~~~~ 311 (378)
|++.++++++ ..++.+.+.+.+.+++|++||++|+ ..+..++++++++ |+++.+|...... ... ... ..+.
T Consensus 190 g~~~~~d~~~-~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 266 (333)
T 1v3u_A 190 GFDAAFNYKT-VNSLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIY 266 (333)
T ss_dssp TCSEEEETTS-CSCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCCC-------CCBCCCHHHHHH
T ss_pred CCcEEEecCC-HHHHHHHHHHHhCCCCeEEEECCCh-HHHHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCHHHHhh
Confidence 9999888762 1677788888776689999999997 5788999999997 9999999765311 111 121 2235
Q ss_pred cccEEEEeeeccCCc---CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 312 SGRTLKGSLFGGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 312 ~~~~i~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
+++++.|+....+.. .+.++++++++.+|++++... .+++++++++||+.+++++.. |++|++
T Consensus 267 ~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 333 (333)
T 1v3u_A 267 KQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEH--VTKGFENMPAAFIEMLNGANLGKAVVTA 333 (333)
T ss_dssp TTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEE--EEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred cCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccc--cccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 688998876544321 235778999999999887643 457999999999999988765 999874
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=325.44 Aligned_cols=310 Identities=18% Similarity=0.208 Sum_probs=250.1
Q ss_pred ccceeeEEeecC-----CC-CeEEE--EeecCC-CCCCcEEEEEeEEecCcccccccccCC-------CCCcccccceeE
Q 017052 10 VITCKAAVAWGA-----GQ-PLVVE--EVEVNP-PQPEEIRIKVVCTSLCRSDITAWETQA-------IFPRIFGHEASG 73 (378)
Q Consensus 10 ~~~~~a~~~~~~-----~~-~~~~~--~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~-------~~p~~~G~e~~G 73 (378)
|.+||++++... +. .++++ +.+.|. |++|||||||.++|+|+.|. .+.|.. .+|.++|||++|
T Consensus 2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G 80 (345)
T 2j3h_A 2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG 80 (345)
T ss_dssp EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence 456777777654 32 38887 888886 89999999999999988875 333432 258899999999
Q ss_pred EEEE--eCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeE
Q 017052 74 IVES--VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEY 151 (378)
Q Consensus 74 ~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~ 151 (378)
++++ +|+.+++|++||||++. |+|+||
T Consensus 81 ~~~~GvV~~~v~~~~vGdrV~~~---------------------------------------------------g~~aey 109 (345)
T 2j3h_A 81 YGVSRIIESGHPDYKKGDLLWGI---------------------------------------------------VAWEEY 109 (345)
T ss_dssp EEEEEEEEECSTTCCTTCEEEEE---------------------------------------------------EESBSE
T ss_pred ceEEEEEecCCCCCCCCCEEEee---------------------------------------------------cCceeE
Confidence 9999 99999999999999865 589999
Q ss_pred EEEeCCc--eeeCCC---CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 152 TVVHSGC--AVKVSS---IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 152 ~~v~~~~--~~~iP~---~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
++++++. ++++|+ +++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++
T Consensus 110 ~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~ 187 (345)
T 2j3h_A 110 SVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSA 187 (345)
T ss_dssp EEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred EEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 9999876 999996 45555 67888899999999988889999999999998 9999999999999999 899999
Q ss_pred CChhhHHHHH-hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC----
Q 017052 226 TNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---- 300 (378)
Q Consensus 226 ~~~~~~~~l~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---- 300 (378)
+++++.+.++ ++|++.++++++ ..++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|.....
T Consensus 188 ~~~~~~~~~~~~~g~~~~~d~~~-~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~ 264 (345)
T 2j3h_A 188 GSKEKVDLLKTKFGFDDAFNYKE-ESDLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH-GRIAVCGMISQYNLEN 264 (345)
T ss_dssp SSHHHHHHHHHTSCCSEEEETTS-CSCSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGTTCSS
T ss_pred CCHHHHHHHHHHcCCceEEecCC-HHHHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC-CEEEEEccccccccCC
Confidence 9999999998 799999988762 2356677777765589999999998 6889999999997 999999875431
Q ss_pred Ceeecccc-ccccccEEEEeeeccCCc--CCcHHHHHHHHHcCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeC
Q 017052 301 PEVAAHYG-LFLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 376 (378)
Q Consensus 301 ~~~~~~~~-~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~ 376 (378)
....+... .+.+++++.|+....+.. .+.++++++++.+|++++ .+.++|+++++++||+.+++++.. |+||++
T Consensus 265 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (345)
T 2j3h_A 265 QEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITY--VEDVADGLEKAPEALVGLFHGKNVGKQVVVV 342 (345)
T ss_dssp CCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCC--CEEEEESGGGSHHHHHHHHTTCCSSEEEEES
T ss_pred ccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcC--cccccCCHHHHHHHHHHHHcCCCceEEEEEe
Confidence 11222222 234688888876543211 123888999999999874 466789999999999999988776 999998
Q ss_pred CC
Q 017052 377 PK 378 (378)
Q Consensus 377 ~~ 378 (378)
++
T Consensus 343 ~~ 344 (345)
T 2j3h_A 343 AR 344 (345)
T ss_dssp SC
T ss_pred CC
Confidence 63
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=315.21 Aligned_cols=288 Identities=18% Similarity=0.204 Sum_probs=235.8
Q ss_pred eEEEEeecCC-CC--CCcEEEEEeEEecCcccccccccCCC----------CCcccccceeEEEEEeCCCCCcCCCCCEE
Q 017052 25 LVVEEVEVNP-PQ--PEEIRIKVVCTSLCRSDITAWETQAI----------FPRIFGHEASGIVESVGPGVTEFNEGEHV 91 (378)
Q Consensus 25 ~~~~~~~~p~-~~--~~evlV~v~~~~i~~~D~~~~~g~~~----------~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (378)
+.+.+.+... +. ++||+|||.++|+|+.|+.+..|..+ .|.++|+|++|+|. +||+|
T Consensus 1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV 1613 (2512)
T 2vz8_A 1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRV 1613 (2512)
T ss_dssp EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCE
T ss_pred eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEE
Confidence 6676655433 33 79999999999999999998887541 24589999999873 79999
Q ss_pred EeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCChhhh
Q 017052 92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171 (378)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~~~a 171 (378)
+++. . .|+|+||+++|++.++++|+++++++|
T Consensus 1614 ~g~~------------------------------~------------------~G~~Aeyv~vp~~~v~~iPd~ls~~eA 1645 (2512)
T 2vz8_A 1614 MGMV------------------------------P------------------AEGLATSVLLLQHATWEVPSTWTLEEA 1645 (2512)
T ss_dssp EEEC------------------------------S------------------SCCSBSEEECCGGGEEECCTTSCHHHH
T ss_pred EEee------------------------------c------------------CCceeeEEEcccceEEEeCCCCCHHHH
Confidence 8762 1 159999999999999999999999999
Q ss_pred hhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCC
Q 017052 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPN 246 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~ 246 (378)
|++++.++|||+++.+.+++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.+.+++ +|++++++++
T Consensus 1646 A~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~ 1724 (2512)
T 2vz8_A 1646 ASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSR 1724 (2512)
T ss_dssp TTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESS
T ss_pred HHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCC
Confidence 9999999999999988899999999999987 9999999999999999 89999999999999986 7899999887
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
+.++.+.+++.+++ ++|+|||++++ +.+..++++++++ |+++.+|.........+....+.+++++.++.+....
T Consensus 1725 --~~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 1800 (2512)
T 2vz8_A 1725 --DTSFEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLF 1800 (2512)
T ss_dssp --SSHHHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTT
T ss_pred --CHHHHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHHh
Confidence 67889999998888 89999999985 7899999999997 9999998643212222233344578899887654321
Q ss_pred c--CCcHHHHHHHHH----cCCCCCCcceeeeeccccHHHHHHHhhcCcee-EEEEeCC
Q 017052 326 P--KTDLPSLVNRYL----KKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 377 (378)
Q Consensus 326 ~--~~~~~~~~~~~~----~~~~~~~~~i~~~~~l~~i~~A~~~l~~~~~~-kvvi~~~ 377 (378)
. ...+.++++++. ++.++ ++++++|+++++++|++.+.+++.. |+||+++
T Consensus 1801 ~~~~~~~~~~l~~l~~~~~~g~l~--p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A 1801 EEGGATWQEVSELLKAGIQEGVVQ--PLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp SSCCHHHHHHHHHHHHHHTTTCSC--CCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred hhCHHHHHHHHHHHHHHHHcCCcC--CCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence 1 234555555554 55554 4578999999999999999998876 9999875
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-23 Score=177.38 Aligned_cols=182 Identities=18% Similarity=0.226 Sum_probs=138.1
Q ss_pred CceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 157 ~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
+.++++|+++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS 80 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 4678999999999999999999999999977789999999999996 9999999999999999 8999999999999999
Q ss_pred hCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC--CCeeecccccccc
Q 017052 236 AFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL--KPEVAAHYGLFLS 312 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~--~~~~~~~~~~~~~ 312 (378)
++|++.+++++ +.++.+.+.+.+.+ ++|++||++|. ..+..++++++++ |+++.+|.... ...+++ ..+.+
T Consensus 81 ~~g~~~~~d~~--~~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~--~~~~~ 154 (198)
T 1pqw_A 81 RLGVEYVGDSR--SVDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGL--AALAK 154 (198)
T ss_dssp TTCCSEEEETT--CSTHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEG--GGGTT
T ss_pred HcCCCEEeeCC--cHHHHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCCh--hHhcC
Confidence 99998888876 45677778777765 89999999986 6889999999997 99999997652 122333 23346
Q ss_pred ccEEEEeeec------cCCcCCcHHHHHHHHHcCCCCCC
Q 017052 313 GRTLKGSLFG------GWKPKTDLPSLVNRYLKKEFMVD 345 (378)
Q Consensus 313 ~~~i~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 345 (378)
++++.+..+. .....+.++++++++.+|++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~ 193 (198)
T 1pqw_A 155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL 193 (198)
T ss_dssp TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence 7787764321 00012467889999999998765
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.9e-11 Score=104.76 Aligned_cols=168 Identities=18% Similarity=0.154 Sum_probs=109.7
Q ss_pred CCCCCEEEeec-------ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC
Q 017052 85 FNEGEHVLTVF-------IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157 (378)
Q Consensus 85 ~~~Gd~V~~~~-------~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 157 (378)
+++||+|++.+ ..+|+.|..|+.|..+.|...... .|+..++
T Consensus 4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~-------------------------~G~~~~~------ 52 (248)
T 2yvl_A 4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP-------------------------EGVKING------ 52 (248)
T ss_dssp CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC-------------------------TTEEETT------
T ss_pred CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC-------------------------CCCEEEE------
Confidence 89999999988 778888999988888888754321 1222222
Q ss_pred ceeeCCCCCChhhhhh-----hchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 158 CAVKVSSIAPLEKICL-----LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 158 ~~~~iP~~l~~~~aa~-----~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
..++.|+.....+.+. +.... .+.. +....++.++++||.+|+| .|..++.+++. +. ++++++.+++..+
T Consensus 53 ~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~ 127 (248)
T 2yvl_A 53 FEVYRPTLEEIILLGFERKTQIIYPK-DSFY-IALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYK 127 (248)
T ss_dssp EEEECCCHHHHHHHTSCCSSCCCCHH-HHHH-HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHH
T ss_pred EEEeCCCHHHHHHhcCcCCCCcccch-hHHH-HHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHH
Confidence 3333343222221111 11121 2222 3467788999999999998 59999999988 66 9999999999888
Q ss_pred HHHh----CCC-cE--EeCCCCCCchHHHHHHHHhCCCccEEEeccCCh-HHHHHHHHHhccCCccEEEecc
Q 017052 233 KAKA----FGV-TE--FLNPNDNNEPVQQVIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 233 ~l~~----~g~-~~--vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+++ .+. +. ++..+ ..+. . ...+++|+|+...+.+ ..+..+.+.|+++ |+++....
T Consensus 128 ~a~~~~~~~~~~~~~~~~~~d--~~~~---~--~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 191 (248)
T 2yvl_A 128 TAQKNLKKFNLGKNVKFFNVD--FKDA---E--VPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP 191 (248)
T ss_dssp HHHHHHHHTTCCTTEEEECSC--TTTS---C--CCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred HHHHHHHHcCCCCcEEEEEcC--hhhc---c--cCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence 7765 343 11 22221 1110 0 0123799999877765 6788999999997 99888743
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=1.2e-11 Score=117.18 Aligned_cols=182 Identities=15% Similarity=0.155 Sum_probs=128.8
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccc
Q 017052 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145 (378)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 145 (378)
..|++.++.|.++|.++.++.+|+.++.-+... ++. .....
T Consensus 76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~-----------------------~~~----------------~~~~~ 116 (404)
T 1gpj_A 76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKK-----------------------AYD----------------RAARL 116 (404)
T ss_dssp EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH-----------------------HHH----------------HHHHH
T ss_pred ecCchHhhhheeeccCCCCCcCCcchhHHHHHH-----------------------HHH----------------HHHHc
Confidence 478999999999999999999999874321000 000 00012
Q ss_pred cceeeEEEEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhc---CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEE
Q 017052 146 SSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA---DISKGSTVVIFGLGTVGLSVAQGAKARGASRII 222 (378)
Q Consensus 146 g~~a~~~~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~---~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi 222 (378)
|++++|+..+...++.+|++++.++++.. .+..++|.++.... +-.+|++|+|+|+|.+|.++++.++..|+.+|+
T Consensus 117 G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~ 195 (404)
T 1gpj_A 117 GTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVL 195 (404)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEE
T ss_pred CCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEE
Confidence 46777777777888999999888876653 46678887763222 235899999999999999999999999987899
Q ss_pred EEcCChhhH-HHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHH--HHHHH--h--ccCCccEEEec
Q 017052 223 GVDTNPEKC-EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMIT--TALQS--C--CDGWGLAVTLG 295 (378)
Q Consensus 223 ~v~~~~~~~-~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~--~~~~~--l--~~~~G~~v~~g 295 (378)
+++++.++. ++++++|++ +++++ ++.+.+. ++|+|++|++.+..+. ..+.. + +++ +.++.++
T Consensus 196 v~~r~~~ra~~la~~~g~~-~~~~~----~l~~~l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~vd 264 (404)
T 1gpj_A 196 VANRTYERAVELARDLGGE-AVRFD----ELVDHLA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILIID 264 (404)
T ss_dssp EECSSHHHHHHHHHHHTCE-ECCGG----GHHHHHH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEEEE
T ss_pred EEeCCHHHHHHHHHHcCCc-eecHH----hHHHHhc-----CCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEEEE
Confidence 999999886 677888875 33332 3433332 6899999998754322 44554 3 444 7777776
Q ss_pred cCC
Q 017052 296 VPK 298 (378)
Q Consensus 296 ~~~ 298 (378)
...
T Consensus 265 ia~ 267 (404)
T 1gpj_A 265 IAN 267 (404)
T ss_dssp CCS
T ss_pred ccC
Confidence 543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.66 E-value=5.7e-08 Score=90.46 Aligned_cols=97 Identities=23% Similarity=0.263 Sum_probs=76.3
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--EeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.+++++... +++.+ ..++.+.+. ++|+||+|+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~DvVI~~~ 238 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSN--SAEIETAVA-----EADLLIGAV 238 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECC--HHHHHHHHH-----TCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCC--HHHHHHHHc-----CCCEEEECC
Confidence 4899999999999999999999999 9999999999999998876544 33332 233433332 689999999
Q ss_pred CChHH------HHHHHHHhccCCccEEEeccCCC
Q 017052 272 GDTGM------ITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 272 g~~~~------~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.+.. ....++.++++ |++++++...+
T Consensus 239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~g 271 (361)
T 1pjc_A 239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQG 271 (361)
T ss_dssp CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTC
T ss_pred CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCC
Confidence 86542 56778889997 99999987543
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.7e-07 Score=88.03 Aligned_cols=165 Identities=15% Similarity=0.184 Sum_probs=103.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCC-------------Cch----HHH
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDN-------------NEP----VQQ 254 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~-------------~~~----~~~ 254 (378)
++++|+|+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+ ++.++. ..+ ..+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 68999999999999999999999999 89999999999999989998654 222100 000 112
Q ss_pred HHHHHhCCCccEEEecc---CChH--H-HHHHHHHhccCCccEEEeccCCCCC-eeeccccc-cccccEEEEeeeccCCc
Q 017052 255 VIKRITDGGADYSFECI---GDTG--M-ITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGL-FLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 255 ~i~~~~~~~~d~vid~~---g~~~--~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~-~~~~~~i~g~~~~~~~~ 326 (378)
.+.+... ++|+||+|+ |.+. . ....++.|+++ +.+++++...+.. ....+... ..+++++.+.... +
T Consensus 250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~---p 324 (384)
T 1l7d_A 250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV---P 324 (384)
T ss_dssp HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG---G
T ss_pred HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC---c
Confidence 2333332 689999999 5322 2 36788999997 9999998543211 11111111 2457777765432 1
Q ss_pred CCcHHHHHHHHHcCCCCCCccee-e---eeccccHHHHHHH
Q 017052 327 KTDLPSLVNRYLKKEFMVDEFIT-H---NLLFEDINQAFNL 363 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~i~-~---~~~l~~i~~A~~~ 363 (378)
......+.+++.++.+++...+. + .+.++.-++.++.
T Consensus 325 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 365 (384)
T 1l7d_A 325 SRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSG 365 (384)
T ss_dssp GGGHHHHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHH
T ss_pred chhHHHHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhc
Confidence 22345577888877665433222 2 3444444455543
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=6e-07 Score=83.99 Aligned_cols=98 Identities=21% Similarity=0.279 Sum_probs=76.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+|++|+|+|+|.+|+.+++.|+.+|+ +|+++++++++.+.+++ +|.....++.. ..++.+.+. ++|+|++|+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~~l~~~l~-----~aDvVi~~~ 239 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AYELEGAVK-----RADLVIGAV 239 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HHHHHHHHc-----CCCEEEECC
Confidence 58999999999999999999999999 99999999999888877 77764332221 223333332 589999999
Q ss_pred CChHH------HHHHHHHhccCCccEEEeccCC
Q 017052 272 GDTGM------ITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 272 g~~~~------~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+.+.. ....++.|+++ +.+++++...
T Consensus 240 ~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~ 271 (377)
T 2vhw_A 240 LVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQ 271 (377)
T ss_dssp CCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGT
T ss_pred CcCCCCCcceecHHHHhcCCCC-cEEEEEecCC
Confidence 76543 56788999997 9999998543
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=3.7e-07 Score=87.59 Aligned_cols=106 Identities=24% Similarity=0.365 Sum_probs=84.2
Q ss_pred hhhhhHHHHHhhcC--CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHH
Q 017052 177 GLSAGLGAAWNVAD--ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQ 254 (378)
Q Consensus 177 ~~~ta~~al~~~~~--~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~ 254 (378)
...++|.++ ++.. ..+|++|+|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|++ +++ +.+
T Consensus 256 ~~~s~~~g~-~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~~-------l~e 325 (494)
T 3ce6_A 256 TRHSLIDGI-NRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VVT-------VEE 325 (494)
T ss_dssp HHHHHHHHH-HHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHH
T ss_pred hhhhhhHHH-HhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Eec-------HHH
Confidence 345566665 3333 6799999999999999999999999999 999999999999889999985 321 222
Q ss_pred HHHHHhCCCccEEEeccCChHHHH-HHHHHhccCCccEEEeccCC
Q 017052 255 VIKRITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 255 ~i~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 298 (378)
.+ .++|+|+++++....+. ..++.++++ ++++.+|...
T Consensus 326 ~l-----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~ 364 (494)
T 3ce6_A 326 AI-----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD 364 (494)
T ss_dssp HG-----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG
T ss_pred HH-----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC
Confidence 22 26899999998766555 788999997 9999998754
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=82.68 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=83.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCC---C--------CchH----HHHH
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPND---N--------NEPV----QQVI 256 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~---~--------~~~~----~~~i 256 (378)
++++|+|+|+|.+|+.++++|+.+|+ +|+++++++++.+.++++|++.+. +..+ . ..++ .+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 58899999999999999999999999 899999999999999999986542 1100 0 0111 1123
Q ss_pred HHHhCCCccEEEeccCCh-----HH-HHHHHHHhccCCccEEEeccCCCC-Ceeecccc--ccccccEEEEee
Q 017052 257 KRITDGGADYSFECIGDT-----GM-ITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYG--LFLSGRTLKGSL 320 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~g~~ 320 (378)
.++.. ++|+||++++.+ .. ....++.|+++ +.+++++...+. ........ ...+++++.|..
T Consensus 250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~ 320 (401)
T 1x13_A 250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT 320 (401)
T ss_dssp HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence 33322 589999995321 22 35788999997 999999864322 11111111 234588887754
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.4e-06 Score=81.31 Aligned_cols=99 Identities=23% Similarity=0.289 Sum_probs=72.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++++|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+++ +|.....+..+ ..++.+.+. ++|+|++|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~~~-----~~DvVi~~~ 237 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT-EANIKKSVQ-----HADLLIGAV 237 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC-HHHHHHHHh-----CCCEEEECC
Confidence 46899999999999999999999999 99999999999888766 77764333321 223333332 589999999
Q ss_pred CChHH------HHHHHHHhccCCccEEEeccCCC
Q 017052 272 GDTGM------ITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 272 g~~~~------~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.+.. ....++.++++ |++++++...+
T Consensus 238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~g 270 (369)
T 2eez_A 238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQG 270 (369)
T ss_dssp C-------CCSCHHHHTTSCTT-CEEEECC----
T ss_pred CCCccccchhHHHHHHHhhcCC-CEEEEEecCCC
Confidence 86531 56788899986 99999986543
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.8e-06 Score=69.16 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=73.3
Q ss_pred hhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhCCCcEEeCCCCCCchHHHHH
Q 017052 178 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQVI 256 (378)
Q Consensus 178 ~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~-l~~~g~~~vi~~~~~~~~~~~~i 256 (378)
.++++.++ +......+++|+|+|+|.+|..+++.++..|+ +|+++++++++.+. +++++.+.. .++ ++.+.+
T Consensus 6 ~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~~-~~~----~~~~~~ 78 (144)
T 3oj0_A 6 VSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEYV-LIN----DIDSLI 78 (144)
T ss_dssp CSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEEE-ECS----CHHHHH
T ss_pred ccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCceE-eec----CHHHHh
Confidence 34566665 44444459999999999999999999988999 59999999988754 566775432 222 333333
Q ss_pred HHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 257 KRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
. ++|+|+.+++.+..... ...++++ +.++.++.+
T Consensus 79 ~-----~~Divi~at~~~~~~~~-~~~l~~g-~~vid~~~p 112 (144)
T 3oj0_A 79 K-----NNDVIITATSSKTPIVE-ERSLMPG-KLFIDLGNP 112 (144)
T ss_dssp H-----TCSEEEECSCCSSCSBC-GGGCCTT-CEEEECCSS
T ss_pred c-----CCCEEEEeCCCCCcEee-HHHcCCC-CEEEEccCC
Confidence 2 58999999987532211 2566775 778777654
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.13 E-value=3e-06 Score=75.75 Aligned_cols=101 Identities=19% Similarity=0.300 Sum_probs=71.6
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCC-cE--EeCCCCCCchHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGV-TE--FLNPNDNNEPVQQVI 256 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~-~~--vi~~~~~~~~~~~~i 256 (378)
+....++.++++||-.|+|. |..++.+++..+ ..++++++.+++..+.+++ .+. +. ++..+ +.+.
T Consensus 104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d-----~~~~- 176 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD-----ISEG- 176 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC-----GGGC-
T ss_pred HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC-----HHHc-
Confidence 34667889999999999876 888889998853 2399999999998877765 354 22 22221 1111
Q ss_pred HHHhCCCccEEEeccCCh-HHHHHHHHHhccCCccEEEec
Q 017052 257 KRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 295 (378)
+..+.+|+|+-....+ ..+..+.+.|+++ |+++.+.
T Consensus 177 --~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~ 213 (277)
T 1o54_A 177 --FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC 213 (277)
T ss_dssp --CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred --ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEe
Confidence 1223799988655544 6788899999997 9988874
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.06 E-value=2.9e-05 Score=59.25 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=63.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
.+++|+|+|+|.+|..+++.+...| . +|+++++++++.+.+...+...+. +.. +. +.+.+.. .++|+||++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~---~~~~~~~-~~~d~vi~~ 76 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNY-SVTVADHDLAALAVLNRMGVATKQVDAK--DE---AGLAKAL-GGFDAVISA 76 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSE-EEEEEESCHHHHHHHHTTTCEEEECCTT--CH---HHHHHHT-TTCSEEEEC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHhCCCcEEEecCC--CH---HHHHHHH-cCCCEEEEC
Confidence 3568999999999999999999999 6 899999999999888877765432 332 21 2333332 278999999
Q ss_pred cCChHHHHHHHHHhccCCccEEE
Q 017052 271 IGDTGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~ 293 (378)
++..........+...+ -+++.
T Consensus 77 ~~~~~~~~~~~~~~~~g-~~~~~ 98 (118)
T 3ic5_A 77 APFFLTPIIAKAAKAAG-AHYFD 98 (118)
T ss_dssp SCGGGHHHHHHHHHHTT-CEEEC
T ss_pred CCchhhHHHHHHHHHhC-CCEEE
Confidence 98643333333334443 44443
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.4e-05 Score=74.53 Aligned_cols=125 Identities=18% Similarity=0.239 Sum_probs=82.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC-------------CCC-CCchH----HH
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-------------PND-NNEPV----QQ 254 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~-------------~~~-~~~~~----~~ 254 (378)
++.+|+|+|+|.+|+.++++|+.+|+ +|+++++++++++.++++|++.+.. |.. -.+.+ .+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 57899999999999999999999999 8999999999999999998863221 100 00011 11
Q ss_pred HHHHHhCCCccEEEeccCChH------HHHHHHHHhccCCccEEEeccCCCCCeeecc-c-ccc-ccccEEEEeee
Q 017052 255 VIKRITDGGADYSFECIGDTG------MITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLF-LSGRTLKGSLF 321 (378)
Q Consensus 255 ~i~~~~~~~~d~vid~~g~~~------~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~-~~~~~i~g~~~ 321 (378)
.+.+.. .+.|+||.|+..+. ..++.++.|+++ +.+|+++...+. .+..+ + ..+ ..++++.+...
T Consensus 268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG-~~e~t~~~~~~~~~GV~~~gv~n 340 (405)
T 4dio_A 268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGG-NIEGAEAGKVTEVGGVRIVGHLN 340 (405)
T ss_dssp HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTC-SBTTCCTTEEEEETTEEEEECSS
T ss_pred HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCC-CccccCCCCeEEECCEEEEEeCC
Confidence 222221 17899999864221 346888999997 999998754332 22221 1 111 34777766643
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.1e-05 Score=74.59 Aligned_cols=104 Identities=23% Similarity=0.294 Sum_probs=74.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC-C-CC----C----c----hHHHHHHH
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP-N-DN----N----E----PVQQVIKR 258 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~-~-~~----~----~----~~~~~i~~ 258 (378)
++.+|+|+|+|.+|+.++++|+.+|+ +|+++++++++.+.++++|++.+... + .. . . .-.+.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 67899999999999999999999999 89999999999999999988643210 0 00 0 0 00112222
Q ss_pred HhCCCccEEEeccCChH------HHHHHHHHhccCCccEEEeccCCC
Q 017052 259 ITDGGADYSFECIGDTG------MITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 259 ~~~~~~d~vid~~g~~~------~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
.. .++|+||.++..+. ..++.++.|+++ +.+++++...+
T Consensus 262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~G 306 (381)
T 3p2y_A 262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETG 306 (381)
T ss_dssp HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGT
T ss_pred HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCC
Confidence 22 27899999863321 246888999997 99999976544
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2.6e-05 Score=63.15 Aligned_cols=92 Identities=21% Similarity=0.224 Sum_probs=64.6
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
...++++|+|+|+|.+|+.+++.++..|. +|+++++++++.+.++ ..|...+. .+ ..+ .+.+.+....++|+||
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d--~~~-~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GD--AAE-FETLKECGMEKADMVF 89 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SC--TTS-HHHHHTTTGGGCSEEE
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ec--CCC-HHHHHHcCcccCCEEE
Confidence 34578899999999999999999999999 8999999999888777 67765433 21 111 1233332122789999
Q ss_pred eccCChHHHHHHHHHhcc
Q 017052 269 ECIGDTGMITTALQSCCD 286 (378)
Q Consensus 269 d~~g~~~~~~~~~~~l~~ 286 (378)
.+++.......+...++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARY 107 (155)
T ss_dssp ECSSCHHHHHHHHHHHHH
T ss_pred EEeCCcHHHHHHHHHHHH
Confidence 999986555555555443
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=4.9e-05 Score=71.02 Aligned_cols=105 Identities=22% Similarity=0.344 Sum_probs=78.4
Q ss_pred hhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 180 AGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 180 ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
..+.++.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|.. +. ++.+.+
T Consensus 205 s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v~-------~Leeal-- 273 (435)
T 3gvp_A 205 SILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-LV-------KLNEVI-- 273 (435)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHT--
T ss_pred HHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-ec-------cHHHHH--
Confidence 33444544433 4589999999999999999999999999 899999998877777777753 21 222222
Q ss_pred HhCCCccEEEeccCChHHHH-HHHHHhccCCccEEEeccCCC
Q 017052 259 ITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 259 ~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~ 299 (378)
...|+|+.|.|....+. +.+..|+++ +.++.+|....
T Consensus 274 ---~~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg~~ 311 (435)
T 3gvp_A 274 ---RQVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHSNT 311 (435)
T ss_dssp ---TTCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSSTTT
T ss_pred ---hcCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCCCc
Confidence 26899999987655554 788999997 99999986543
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=4.5e-05 Score=68.10 Aligned_cols=98 Identities=14% Similarity=0.146 Sum_probs=73.4
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcEE--eCCCCCCchHHHHHHHHhC
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEF--LNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~v--i~~~~~~~~~~~~i~~~~~ 261 (378)
.++++++++||.+|+|..+..++.+|+..|+ +|++++.+++..+.+++. |.+.+ +.-+ ..+ +..
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gD--a~~-------l~d 186 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGD--ETV-------IDG 186 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESC--GGG-------GGG
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECc--hhh-------CCC
Confidence 4678999999999998878888888988898 999999999988887763 54322 2221 111 223
Q ss_pred CCccEEEeccCCh---HHHHHHHHHhccCCccEEEecc
Q 017052 262 GGADYSFECIGDT---GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+.||+|+.....+ ..+.++.+.|+++ |+++....
T Consensus 187 ~~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~ 223 (298)
T 3fpf_A 187 LEFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY 223 (298)
T ss_dssp CCCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred CCcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence 5899999654432 5788899999997 99987653
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.86 E-value=1.5e-05 Score=70.64 Aligned_cols=94 Identities=17% Similarity=0.125 Sum_probs=69.1
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.++.+||.+|+|. |..+..+++.. +. ++++++.+++..+.+++.+... ++..+ ..++ .+..+.+|+|+.
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d--~~~~-----~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVAS--SHRL-----PFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECC--TTSC-----SBCTTCEEEEEE
T ss_pred CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcc--hhhC-----CCCCCceeEEEE
Confidence 6789999999987 88899999886 66 9999999999999988765432 22221 1111 112237999995
Q ss_pred ccCChHHHHHHHHHhccCCccEEEecc
Q 017052 270 CIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 270 ~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
. .....+.++.+.|+++ |+++....
T Consensus 155 ~-~~~~~l~~~~~~L~pg-G~l~~~~~ 179 (269)
T 1p91_A 155 I-YAPCKAEELARVVKPG-GWVITATP 179 (269)
T ss_dssp E-SCCCCHHHHHHHEEEE-EEEEEEEE
T ss_pred e-CChhhHHHHHHhcCCC-cEEEEEEc
Confidence 4 4456789999999997 99887753
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00019 Score=64.48 Aligned_cols=95 Identities=21% Similarity=0.304 Sum_probs=72.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|++|+|+|+|.+|+.+++.++..|+ +|++.+++.++.+.++++|+..+ +. .++.+.+ ...|+|+.++
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~----~~l~~~l-----~~aDvVi~~~ 221 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HI----SKAAQEL-----RDVDVCINTI 221 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EG----GGHHHHT-----TTCSEEEECC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Ch----hhHHHHh-----cCCCEEEECC
Confidence 478999999999999999999999999 99999999988877778887532 22 1232222 2689999998
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCC
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.....-...+..++++ +.+++++...
T Consensus 222 p~~~i~~~~l~~mk~~-~~lin~ar~~ 247 (293)
T 3d4o_A 222 PALVVTANVLAEMPSH-TFVIDLASKP 247 (293)
T ss_dssp SSCCBCHHHHHHSCTT-CEEEECSSTT
T ss_pred ChHHhCHHHHHhcCCC-CEEEEecCCC
Confidence 7532234567888986 8999997643
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00021 Score=62.35 Aligned_cols=103 Identities=9% Similarity=0.098 Sum_probs=69.2
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE---eCCCCCCchHHHHHHHHhC--CCccEE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF---LNPNDNNEPVQQVIKRITD--GGADYS 267 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v---i~~~~~~~~~~~~i~~~~~--~~~d~v 267 (378)
+++|||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+-+.... .|..+ ..+..+.+.+... +++|++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~g~iDiL 79 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVAD-PLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 478999987 9999999999999999 89999999988877766554332 23331 2333333333322 479999
Q ss_pred EeccCCh----------H---------------HHHHHHHHhccCCccEEEeccCC
Q 017052 268 FECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 268 id~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+++.|.. + ..+.+...|.+++|++|.++...
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~ 135 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTR 135 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecc
Confidence 9988742 1 12234445544459999987543
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.69 E-value=9.5e-05 Score=64.90 Aligned_cols=101 Identities=19% Similarity=0.225 Sum_probs=71.3
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhC----CCcE---EeCCCCCCchHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF----GVTE---FLNPNDNNEPVQQVI 256 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~----g~~~---vi~~~~~~~~~~~~i 256 (378)
+.....++++++||-.|+|. |..++.+++..+ ..++++++.+++..+.+++. |.+. ++..+ +.+
T Consensus 85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d-----~~~-- 156 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD-----IYE-- 156 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC-----GGG--
T ss_pred HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc-----hhh--
Confidence 34667889999999999875 888889998853 33999999999988777653 4332 22221 111
Q ss_pred HHHhCCCccEEEeccCCh-HHHHHHHHHhccCCccEEEec
Q 017052 257 KRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+..+.+|+|+-....+ ..+..+.+.|+++ |+++.+.
T Consensus 157 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 194 (255)
T 3mb5_A 157 -GIEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT 194 (255)
T ss_dssp -CCCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred -ccCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence 11223799988665543 4788999999997 9988763
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00016 Score=65.33 Aligned_cols=97 Identities=20% Similarity=0.285 Sum_probs=72.9
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
--.|++|+|+|+|.+|+.+++.++..|+ +|++.+++.++.+.++++|... +++ .++.+.+ ...|+|+.+
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~----~~l~~~l-----~~aDvVi~~ 222 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHT----DELKEHV-----KDIDICINT 222 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEG----GGHHHHS-----TTCSEEEEC
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Ech----hhHHHHh-----hCCCEEEEC
Confidence 3478999999999999999999999999 9999999998887777777642 222 1232222 268999999
Q ss_pred cCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+...-.-...+..++++ +.+++++....
T Consensus 223 ~p~~~i~~~~~~~mk~g-~~lin~a~g~~ 250 (300)
T 2rir_A 223 IPSMILNQTVLSSMTPK-TLILDLASRPG 250 (300)
T ss_dssp CSSCCBCHHHHTTSCTT-CEEEECSSTTC
T ss_pred CChhhhCHHHHHhCCCC-CEEEEEeCCCC
Confidence 88632234567788886 89999986443
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00041 Score=57.53 Aligned_cols=87 Identities=20% Similarity=0.320 Sum_probs=63.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHh-CCCccEEEe
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRIT-DGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~-~~~~d~vid 269 (378)
.+++|+|+|+|.+|..+++.++.. |. +|+++++++++.+.+++.|...+. +.. +. +.+.+.+ -.++|+|+.
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~--~~---~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDAT--DP---DFWERILDTGHVKLVLL 111 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTT--CH---HHHHTBCSCCCCCEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCC--CH---HHHHhccCCCCCCEEEE
Confidence 367899999999999999999998 99 899999999999999888876554 332 22 2333331 237999999
Q ss_pred ccCChHHHHHHHHHhc
Q 017052 270 CIGDTGMITTALQSCC 285 (378)
Q Consensus 270 ~~g~~~~~~~~~~~l~ 285 (378)
+++...........++
T Consensus 112 ~~~~~~~~~~~~~~~~ 127 (183)
T 3c85_A 112 AMPHHQGNQTALEQLQ 127 (183)
T ss_dssp CCSSHHHHHHHHHHHH
T ss_pred eCCChHHHHHHHHHHH
Confidence 9987554444443433
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.66 E-value=3.6e-05 Score=70.71 Aligned_cols=104 Identities=20% Similarity=0.204 Sum_probs=66.6
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhC----C-------------CcEEeCCCC
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAF----G-------------VTEFLNPND 247 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~----g-------------~~~vi~~~~ 247 (378)
.....+.+|++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++. + .-.++..+
T Consensus 98 l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d- 175 (336)
T 2b25_A 98 LSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD- 175 (336)
T ss_dssp HHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC-
T ss_pred HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC-
Confidence 3556789999999999876 7788888888763 3899999999888777652 1 11122111
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCCh-HHHHHHHHHhccCCccEEEecc
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..+. ...+..+.+|+|+-....+ ..+..+.+.|+++ |+++.+..
T Consensus 176 -~~~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~ 220 (336)
T 2b25_A 176 -ISGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV 220 (336)
T ss_dssp -TTCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred -hHHc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 1111 0111223689888544333 4578899999997 99987643
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00065 Score=53.69 Aligned_cols=93 Identities=14% Similarity=0.174 Sum_probs=66.0
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC-CCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-PNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~-~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.++|+|.|.|.+|..+++.++..|. .|+++++++++.+.+++.|...+.- .. +.+ .+.+..-..+|.++-+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~~--~~~---~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNAA--NEE---IMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCTT--SHH---HHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCCC--CHH---HHHhcCcccCCEEEEECC
Confidence 4689999999999999999999999 8999999999999999888865542 22 222 233322227899999998
Q ss_pred ChHHHH---HHHHHhccCCccEEE
Q 017052 273 DTGMIT---TALQSCCDGWGLAVT 293 (378)
Q Consensus 273 ~~~~~~---~~~~~l~~~~G~~v~ 293 (378)
...... ...+.+.++ .+++.
T Consensus 81 ~~~~n~~~~~~a~~~~~~-~~iia 103 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPD-IEIIA 103 (140)
T ss_dssp CHHHHHHHHHHHHHHCSS-SEEEE
T ss_pred ChHHHHHHHHHHHHHCCC-CeEEE
Confidence 754222 234445554 55443
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00015 Score=64.63 Aligned_cols=103 Identities=18% Similarity=0.256 Sum_probs=71.5
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhC-----C--CcE--EeCCCCCCchHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF-----G--VTE--FLNPNDNNEPVQQ 254 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~-----g--~~~--vi~~~~~~~~~~~ 254 (378)
+.....+.++++||.+|+| .|..++.+++..+ ..++++++.+++..+.+++. | .+. ++..+ ..+.
T Consensus 91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d--~~~~-- 165 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD--LADS-- 165 (280)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC--GGGC--
T ss_pred HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECc--hHhc--
Confidence 3456778999999999987 6888889998753 23999999999988777653 4 222 22221 1110
Q ss_pred HHHHHhCCCccEEEeccCCh-HHHHHHHHHhccCCccEEEecc
Q 017052 255 VIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 255 ~i~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+..+.+|+|+.....+ ..+..+.+.|+++ |+++.+..
T Consensus 166 ---~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 204 (280)
T 1i9g_A 166 ---ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA 204 (280)
T ss_dssp ---CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred ---CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence 01123799988665544 6788899999997 99888643
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00018 Score=67.34 Aligned_cols=103 Identities=20% Similarity=0.260 Sum_probs=76.4
Q ss_pred hHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 181 GLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 181 a~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
.+.++.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|... . ++.+.+.
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v-------~LeElL~-- 301 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-V-------TLDDAAS-- 301 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-C-------CHHHHGG--
T ss_pred HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-c-------cHHHHHh--
Confidence 3344433333 4689999999999999999999999999 9999999888766666667632 2 1222222
Q ss_pred hCCCccEEEeccCChHHH-HHHHHHhccCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGDTGMI-TTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..|+|+.+.|....+ ...+..|+++ +.++++|...
T Consensus 302 ---~ADIVv~atgt~~lI~~e~l~~MK~G-AILINvGRgd 337 (464)
T 3n58_A 302 ---TADIVVTTTGNKDVITIDHMRKMKDM-CIVGNIGHFD 337 (464)
T ss_dssp ---GCSEEEECCSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred ---hCCEEEECCCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence 579999998764443 5788999997 9999988654
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00017 Score=63.95 Aligned_cols=103 Identities=20% Similarity=0.271 Sum_probs=71.6
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE---eCCCCCCchHHHHHHHHh--CCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
-+|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ +++|.... .|..+ ..+..+.+.+.. .|++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSAN-LAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence 36899999988 9999999999999999 899999999887644 55665432 24331 233333333332 2479
Q ss_pred cEEEeccCCh-------------------------HHHHHHHHHhccCCccEEEeccC
Q 017052 265 DYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 265 d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
|+++++.|.. -..+.++..|+++ |++|.++..
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~ 161 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGST 161 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCG
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeeh
Confidence 9999988752 1233455577776 999988754
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00017 Score=68.65 Aligned_cols=99 Identities=23% Similarity=0.340 Sum_probs=74.9
Q ss_pred HHHhhcCC-CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 184 AAWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 184 al~~~~~~-~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
++.+..+. -.|++++|+|+|.+|+++++.++..|+ +|+++++++.+.+.+...+.+ +.+.+ +. ..
T Consensus 254 gi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le----e~--------~~ 319 (488)
T 3ond_A 254 GLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE----DV--------VS 319 (488)
T ss_dssp HHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG----GT--------TT
T ss_pred HHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH----HH--------HH
Confidence 34444444 479999999999999999999999999 999999999888777777753 22111 10 12
Q ss_pred CccEEEeccCChHHHH-HHHHHhccCCccEEEeccC
Q 017052 263 GADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 263 ~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 297 (378)
.+|+++++.|....+. ..+..++++ +.++..|..
T Consensus 320 ~aDvVi~atG~~~vl~~e~l~~mk~g-aiVvNaG~~ 354 (488)
T 3ond_A 320 EADIFVTTTGNKDIIMLDHMKKMKNN-AIVCNIGHF 354 (488)
T ss_dssp TCSEEEECSSCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred hcCEEEeCCCChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence 6899999998755543 478889987 999998865
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00014 Score=63.14 Aligned_cols=104 Identities=14% Similarity=0.151 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
+-+|+++||+|+ +++|++.++.+...|+ +|+.++++.++.+..+.-.+.. ..|..+ ..+..+.+.+ -+++|+++
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~--~g~iDiLV 83 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD-SQRLQRLFEA--LPRLDVLV 83 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC-HHHHHHHHHH--CSCCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC-HHHHHHHHHh--cCCCCEEE
Confidence 347999999988 9999999999999999 8999999887665332211111 234431 2233333332 25899999
Q ss_pred eccCCh-----------------------HHHHHHHHHhccCCccEEEeccCC
Q 017052 269 ECIGDT-----------------------GMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 269 d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.|.. -..+.++..|+.++|++|.++...
T Consensus 84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~ 136 (242)
T 4b79_A 84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY 136 (242)
T ss_dssp ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence 998742 112334556654459999997543
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00013 Score=63.95 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=72.1
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhC-----CCcEE--eCCCCCCchHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF-----GVTEF--LNPNDNNEPVQQVI 256 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~-----g~~~v--i~~~~~~~~~~~~i 256 (378)
+.....+.++++||..|+|. |..++.+++..+ ..++++++.+++..+.+++. |.+.+ +..+ ..+.
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d--~~~~---- 160 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGK--LEEA---- 160 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESC--GGGC----
T ss_pred HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECc--hhhc----
Confidence 34567789999999999975 888899998863 23999999999988877663 53322 2221 1110
Q ss_pred HHHhCCCccEEEeccCCh-HHHHHHHHHhccCCccEEEec
Q 017052 257 KRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+..+.+|+|+-....+ ..+..+.+.|+++ |+++.+.
T Consensus 161 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 198 (258)
T 2pwy_A 161 -ELEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYL 198 (258)
T ss_dssp -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred -CCCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEe
Confidence 11223799988665554 6788899999997 9988874
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00079 Score=59.02 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=69.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhCCCcEEe---CCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTEFL---NPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~----l~~~g~~~vi---~~~~~~~~~~~~i~~~~~--~ 262 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+. +++.|..... |.. +..+..+.+.+... |
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-DELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-CHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-CHHHHHHHHHHHHHHCC
Confidence 6899999988 9999999999999999 89999999876543 3445554432 332 13334444444332 3
Q ss_pred CccEEEeccCCh-------------------------HHHHHHHHHh--ccCCccEEEeccCC
Q 017052 263 GADYSFECIGDT-------------------------GMITTALQSC--CDGWGLAVTLGVPK 298 (378)
Q Consensus 263 ~~d~vid~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~g~~~ 298 (378)
++|+++++.|.. ...+.++..| +.++|++|.++...
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~ 148 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT 148 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence 799999998842 1223445555 22349999997644
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00078 Score=53.18 Aligned_cols=76 Identities=18% Similarity=0.330 Sum_probs=58.1
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.++|+|+|+|.+|..+++.+...|. +|+++++++++.+.+++.+...+. +.. +. +.+.+..-.++|+++.+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~gd~~--~~---~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVIADPT--DE---SFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEECCTT--CH---HHHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEECCCC--CH---HHHHhCCcccCCEEEEecC
Confidence 5689999999999999999999999 899999999999998888765443 222 22 2333332237899999998
Q ss_pred ChH
Q 017052 273 DTG 275 (378)
Q Consensus 273 ~~~ 275 (378)
...
T Consensus 80 ~~~ 82 (141)
T 3llv_A 80 DDE 82 (141)
T ss_dssp CHH
T ss_pred CHH
Confidence 643
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0008 Score=58.11 Aligned_cols=100 Identities=15% Similarity=0.176 Sum_probs=67.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.+++|||+|+ |.+|..+++.+...|. +|+++++++++.+.+...++..++..+ .. +.+.+.. +++|+||.+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~D---l~--~~~~~~~-~~~D~vi~~a 92 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVAN---LE--EDFSHAF-ASIDAVVFAA 92 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECC---TT--SCCGGGG-TTCSEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcc---cH--HHHHHHH-cCCCEEEECC
Confidence 5789999998 9999999999999999 999999999998888777762333222 11 2222222 2799999999
Q ss_pred CChH-------------HHHHHHHHhcc-CCccEEEeccCCC
Q 017052 272 GDTG-------------MITTALQSCCD-GWGLAVTLGVPKL 299 (378)
Q Consensus 272 g~~~-------------~~~~~~~~l~~-~~G~~v~~g~~~~ 299 (378)
|... ....+++.+.. +.++++.++....
T Consensus 93 g~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 134 (236)
T 3e8x_A 93 GSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT 134 (236)
T ss_dssp CCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred CCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence 8521 11223333322 2378998877554
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00043 Score=64.88 Aligned_cols=101 Identities=22% Similarity=0.347 Sum_probs=73.9
Q ss_pred HHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh
Q 017052 182 LGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 182 ~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
+.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|.... ++.+.+.
T Consensus 198 ldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------sL~eal~--- 265 (436)
T 3h9u_A 198 VDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------LVEDVVE--- 265 (436)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------CHHHHTT---
T ss_pred HHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec--------CHHHHHh---
Confidence 334433333 3479999999999999999999999999 89999999988877777776321 2322222
Q ss_pred CCCccEEEeccCChHHHH-HHHHHhccCCccEEEeccC
Q 017052 261 DGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 261 ~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 297 (378)
..|+|+.+.+....+. ..+..|+++ ..++.++..
T Consensus 266 --~ADVVilt~gt~~iI~~e~l~~MK~g-AIVINvgRg 300 (436)
T 3h9u_A 266 --EAHIFVTTTGNDDIITSEHFPRMRDD-AIVCNIGHF 300 (436)
T ss_dssp --TCSEEEECSSCSCSBCTTTGGGCCTT-EEEEECSSS
T ss_pred --hCCEEEECCCCcCccCHHHHhhcCCC-cEEEEeCCC
Confidence 5899998877544333 667889986 888888743
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0012 Score=57.12 Aligned_cols=78 Identities=14% Similarity=0.268 Sum_probs=53.4
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-E--eCCCCCCchHHHHHHHHh--CCCccE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ ++... . .|..+ ..+..+.+.+.. .+++|+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH-HEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS-HHHHHHHHHHHHHHHCSCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHhcCCCcE
Confidence 678999988 9999999999999999 89999999887765543 33221 2 24331 223333333322 247899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
++++.|.
T Consensus 81 lvnnAg~ 87 (235)
T 3l6e_A 81 VLHCAGT 87 (235)
T ss_dssp EEEECCC
T ss_pred EEECCCC
Confidence 9999874
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00067 Score=53.45 Aligned_cols=76 Identities=21% Similarity=0.393 Sum_probs=55.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++++|+|+|+|.+|..+++.+...|. +|+++++++++.+.+++.+...+. +.. + .+.+.+...+++|+|+.++
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~d~~--~---~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANAT--E---ENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEECCTT--C---HHHHHTTTGGGCSEEEECC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEEeCCC--C---HHHHHhcCCCCCCEEEECC
Confidence 35689999999999999999999998 799999998888777666654332 222 2 2233333123789999999
Q ss_pred CCh
Q 017052 272 GDT 274 (378)
Q Consensus 272 g~~ 274 (378)
+.+
T Consensus 79 ~~~ 81 (144)
T 2hmt_A 79 GAN 81 (144)
T ss_dssp CSC
T ss_pred CCc
Confidence 864
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00065 Score=59.74 Aligned_cols=103 Identities=11% Similarity=0.092 Sum_probs=67.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH---HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA---KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l---~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.++++.++.+.+ ++.+... . .|..+ ..+..+.+.+.. .|+
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD-DAQCRDAVAQTIATFGR 83 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 6899999988 9999999999999999 899998877655443 3334332 2 34432 233333333332 248
Q ss_pred ccEEEeccCCh---------H---------------HHHHHHHHhccCCccEEEeccC
Q 017052 264 ADYSFECIGDT---------G---------------MITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 264 ~d~vid~~g~~---------~---------------~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+|+++++.|.. + ..+..+..|..++|++|.++..
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~ 141 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK 141 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence 99999998741 1 2233445565445999999754
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00058 Score=59.95 Aligned_cols=80 Identities=16% Similarity=0.201 Sum_probs=54.8
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcE-E--eCCCCCCchHHHHHHHHh--CCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
-.|+++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. +++... . .|..+ ..++.+.+.+.. .+++
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIAD-LNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHHhCCC
Confidence 36789999988 9999999999999999 8999999988776554 344332 2 23331 223333333222 2478
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++++.|.
T Consensus 84 d~lv~nAg~ 92 (255)
T 4eso_A 84 DLLHINAGV 92 (255)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCCC
Confidence 999998874
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0014 Score=57.63 Aligned_cols=79 Identities=15% Similarity=0.296 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-Ch--HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCC--cEE--eCCCCCCchHHHHHHHHhC
Q 017052 193 KGSTVVIFGL-GT--VGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV--TEF--LNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~--vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~--~~v--i~~~~~~~~~~~~i~~~~~ 261 (378)
.|+++||+|+ |. +|.++++.+...|+ +|+.++++++..+.+++ ++. -.. .|..+ ..++.+.+.++..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN-DAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS-SHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC-HHHHHHHHHHHHH
Confidence 5789999987 66 99999999989999 89999888765544433 333 122 24432 3344444444322
Q ss_pred --CCccEEEeccCC
Q 017052 262 --GGADYSFECIGD 273 (378)
Q Consensus 262 --~~~d~vid~~g~ 273 (378)
+++|+++.+.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (266)
T 3oig_A 84 QVGVIHGIAHCIAF 97 (266)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCeeEEEEcccc
Confidence 378999998873
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0014 Score=57.37 Aligned_cols=79 Identities=19% Similarity=0.261 Sum_probs=53.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++... .+ |.. +..++.+.+.... .+++|
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~id 82 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVS-SEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTT-CHHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCC-CHHHHHHHHHHHHHHcCCCC
Confidence 5788999988 9999999999999999 899999998776544 3344332 22 332 1223333333322 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 83 ~lv~~Ag~ 90 (253)
T 1hxh_A 83 VLVNNAGI 90 (253)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999873
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0012 Score=58.74 Aligned_cols=102 Identities=19% Similarity=0.212 Sum_probs=64.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-H----HHHHhCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-C----EKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~----~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++ . +.+++.+... . .|..+ ..++.+.+.+.. .
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV-VEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 88888887543 2 2234445433 2 23331 223333333322 2
Q ss_pred CCccEEEeccCCh----------H---------------HHHHHHHHhccCCccEEEeccC
Q 017052 262 GGADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 262 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+++|++|++.|.. + ..+.+...+... |++|.++..
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~ 165 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI 165 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence 4799999998731 1 123444555554 999998754
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0014 Score=58.25 Aligned_cols=78 Identities=19% Similarity=0.366 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCC-cE--E--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGV-TE--F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~-~~--v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ +..+. .. + .|..+ ..++.+.+.++.
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 5789999988 9999999999999999 899999988766543 22332 11 2 24331 223333333322
Q ss_pred CCCccEEEeccC
Q 017052 261 DGGADYSFECIG 272 (378)
Q Consensus 261 ~~~~d~vid~~g 272 (378)
.+++|++|++.|
T Consensus 109 ~g~iD~vi~~Ag 120 (279)
T 1xg5_A 109 HSGVDICINNAG 120 (279)
T ss_dssp HCCCSEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 237999999987
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0012 Score=57.71 Aligned_cols=78 Identities=14% Similarity=0.286 Sum_probs=55.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .|
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK-KKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 6899999988 9999999999999999 899999998876543 44565443 24431 233333333332 24
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|+++++.|
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7999999887
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0023 Score=56.15 Aligned_cols=78 Identities=18% Similarity=0.310 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCc--EE--eCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT--EF--LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~--~v--i~~~~~~~~~~~~i~~~~- 260 (378)
+|+++||+|+ | ++|++.++.+...|+ +|+.++++++..+.+. +++.. .. .|..+ ..+..+.+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS-DEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC-HHHHHHHHHHHHH
Confidence 6899999997 5 799999999999999 8999999887665443 34432 22 24431 233333333322
Q ss_pred -CCCccEEEeccC
Q 017052 261 -DGGADYSFECIG 272 (378)
Q Consensus 261 -~~~~d~vid~~g 272 (378)
.|++|+++++.|
T Consensus 83 ~~G~iD~lvnnAg 95 (256)
T 4fs3_A 83 DVGNIDGVYHSIA 95 (256)
T ss_dssp HHCCCSEEEECCC
T ss_pred HhCCCCEEEeccc
Confidence 247999999877
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.002 Score=57.69 Aligned_cols=78 Identities=21% Similarity=0.277 Sum_probs=51.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHhCCCcEE-e--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CE----KAKAFGVTEF-L--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~~----~l~~~g~~~v-i--~~~~~~~~~~~~i~~~~--~ 261 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++ .+ .+++.+.... + |..+ ..++.+.+.+.. .
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD-EQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 6789999988 9999999999999999 88888887643 22 2334454332 2 4331 223333333322 2
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|++.|
T Consensus 124 g~iD~lvnnAg 134 (291)
T 3ijr_A 124 GSLNILVNNVA 134 (291)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37899999876
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0024 Score=57.24 Aligned_cols=104 Identities=19% Similarity=0.269 Sum_probs=66.7
Q ss_pred CCCCeEEEEcc-Ch--HHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEEe--CCCCCCchHHHHHHHHh--
Q 017052 192 SKGSTVVIFGL-GT--VGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFL--NPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~--vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~vi--~~~~~~~~~~~~i~~~~-- 260 (378)
-.|+++||+|+ |. +|.++++.+...|+ +|+.++++++..+.++ +.+....+ |..+ ..++.+.+.+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD-AASIDAVFETLEKK 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHh
Confidence 46889999987 66 99999999999999 8999988865444333 33433333 4431 223333333332
Q ss_pred CCCccEEEeccCChH-----------------------------HHHHHHHHhccCCccEEEeccCC
Q 017052 261 DGGADYSFECIGDTG-----------------------------MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 261 ~~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.+++|++|++.|... ..+.++..+.++ |++|.++...
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~ 172 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYG 172 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGG
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehh
Confidence 247999999987421 223344566665 9999887543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0017 Score=56.63 Aligned_cols=79 Identities=24% Similarity=0.334 Sum_probs=55.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEEe---CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFL---NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~vi---~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++++..... |.. +..+..+.+.+.. .+++|
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADIS-DPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTT-CHHHHHHHHHHHHHHHSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCC-CHHHHHHHHHHHHHHCCCCC
Confidence 5789999988 9999999999999999 899999998876554 345544322 332 1223333333322 23799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 83 ~lv~nAg~ 90 (247)
T 3rwb_A 83 ILVNNASI 90 (247)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999883
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0032 Score=55.67 Aligned_cols=101 Identities=24% Similarity=0.333 Sum_probs=64.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhCCCcEE-e--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTEF-L--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~----l~~~g~~~v-i--~~~~~~~~~~~~i~~~~--~ 261 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.+.+ +.++.+. +++.+.... + |..+ ..++.+.+.+.. .
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD-AEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 6789999988 9999999999999999 7877744 4444333 333454432 2 3331 233333333332 2
Q ss_pred CCccEEEeccCCh-------------------------HHHHHHHHHhccCCccEEEecc
Q 017052 262 GGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+++|++|++.|.. ...+.+...+.++ |++|.++.
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS 166 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGS 166 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeC
Confidence 3799999998741 1233445566665 99998865
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0032 Score=54.54 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITD--GGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~~~~~~~~~~~~i~~~~~--~~~d~vi 268 (378)
+++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++....++..+-.+.+ .+.++.. +++|++|
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~id~vi 81 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDWE---ATERALGSVGPVDLLV 81 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHH---HHHHHHTTCCCCCEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHH---HHHHHHHHcCCCCEEE
Confidence 5789999998 9999999999999999 8999999987766443 3432233322211222 2222222 3789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 82 ~~Ag~ 86 (244)
T 3d3w_A 82 NNAAV 86 (244)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99873
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0027 Score=56.07 Aligned_cols=104 Identities=17% Similarity=0.217 Sum_probs=66.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH----HHHhCCCcEE---eCCCCCCchHHHHHHHHh--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCE----KAKAFGVTEF---LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~----~l~~~g~~~v---i~~~~~~~~~~~~i~~~~-- 260 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+.+.+ +.++.+ .+++.+.... .|..+ ..++.+.+.+..
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ-VPEIVKLFDQAVAH 93 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 35789999988 9999999999999999 7777654 444433 2334554332 23331 233333333332
Q ss_pred CCCccEEEeccCCh-------------------------HHHHHHHHHhccCCccEEEeccCC
Q 017052 261 DGGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 261 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.+++|+++++.|.. ...+.++..+.++ |++|.++...
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~ 155 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT 155 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence 23789999988741 1233455667775 9999987654
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0034 Score=53.26 Aligned_cols=92 Identities=13% Similarity=0.181 Sum_probs=63.2
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+|||+|+ |.+|..+++.+...|. +|+++++++++.+.+. -+...+ .|.. +.+. +.+ .++|+||.+.|.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~--d~~~-~~~-----~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIF--DLTL-SDL-----SDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGG--GCCH-HHH-----TTCSEEEECCCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEecccc--Chhh-hhh-----cCCCEEEECCcC
Confidence 6999998 9999999999999998 9999999988876654 333332 2333 2222 211 378999999986
Q ss_pred h--------HHHHHHHHHhccC-CccEEEeccC
Q 017052 274 T--------GMITTALQSCCDG-WGLAVTLGVP 297 (378)
Q Consensus 274 ~--------~~~~~~~~~l~~~-~G~~v~~g~~ 297 (378)
. .....+++.+... .++++.++..
T Consensus 72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 3 2334566666553 3688887654
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0023 Score=57.48 Aligned_cols=79 Identities=20% Similarity=0.361 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEEe--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
.|+++||+|+ | ++|.++++.+...|+ +|+.++++++..+.++ +.+....+ |..+ ..++.+.+.+...
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD-AESVDNMFKVLAEEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 5 999999999999999 8999989876544443 33433333 4431 2333333333322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 107 g~iD~lVnnAG~ 118 (296)
T 3k31_A 107 GSLDFVVHAVAF 118 (296)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999999874
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0015 Score=57.26 Aligned_cols=78 Identities=24% Similarity=0.300 Sum_probs=53.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe--CCCCCCchHHHHHHHHh--CCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi--~~~~~~~~~~~~i~~~~--~~~~d~v 267 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+..++++. ..+ |..+ ..++.+.+.+.. .+++|++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLED-ERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999998 9999999999999999 89999888777444555542 333 4331 223333333322 2478999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|++.|.
T Consensus 82 v~~Ag~ 87 (256)
T 2d1y_A 82 VNNAAI 87 (256)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999873
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0047 Score=52.09 Aligned_cols=100 Identities=15% Similarity=0.187 Sum_probs=69.7
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-E--EeCCCCCCchHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-E--FLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~--vi~~~~~~~~~~~~i~~ 258 (378)
.....+.++++||-+|+|. |..++.+|+. +. +|++++.+++..+.+++ +|.+ . ++..+ ..+. +.
T Consensus 48 l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~---~~- 118 (204)
T 3njr_A 48 LAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGT--APAA---LA- 118 (204)
T ss_dssp HHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--TTGG---GT-
T ss_pred HHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCc--hhhh---cc-
Confidence 3566788999999999975 8888888888 77 99999999998877654 4544 2 22221 1110 11
Q ss_pred HhCCCccEEEeccCC-hHHHHHHHHHhccCCccEEEecc
Q 017052 259 ITDGGADYSFECIGD-TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 259 ~~~~~~d~vid~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
....+|+|+...+. ...+..+.+.|+++ |+++....
T Consensus 119 -~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~ 155 (204)
T 3njr_A 119 -DLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAV 155 (204)
T ss_dssp -TSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEEC
T ss_pred -cCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEec
Confidence 11279998865443 22678889999997 99887643
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0032 Score=54.71 Aligned_cols=79 Identities=20% Similarity=0.307 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCC---CcEEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFG---VTEFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g---~~~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. .+. .-.++ |..+ ..++.+.+.... .++
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 5788999998 9999999999999999 8999999887665443 232 11222 3331 223333333322 136
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|.+.|.
T Consensus 83 id~li~~Ag~ 92 (251)
T 1zk4_A 83 VSTLVNNAGI 92 (251)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999998873
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0042 Score=52.83 Aligned_cols=92 Identities=17% Similarity=0.262 Sum_probs=63.6
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+|||+|+ |.+|..+++.+...|. +|+++++++++.+.+..-+...+. |.. +.+. + .+ +++|+||.+.|.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~--d~~~-~---~~--~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPL--VLTE-A---DL--DSVDAVVDALSV 72 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGG--GCCH-H---HH--TTCSEEEECCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEecccc--cccH-h---hc--ccCCEEEECCcc
Confidence 5999998 9999999999999998 999999999887766544544332 333 2222 1 11 378999999986
Q ss_pred h----------HHHHHHHHHhccCCccEEEecc
Q 017052 274 T----------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 274 ~----------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
. .....+++.+...+++++.++.
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 2 2234455666554378888853
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0047 Score=51.34 Aligned_cols=99 Identities=18% Similarity=0.165 Sum_probs=65.6
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCC---------CeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHH
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGA---------SRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRI 259 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~---------~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~ 259 (378)
.++++++||.+|+|. |..++.+++..+. .+|++++.++... +.....+ ..+-......+.+...
T Consensus 19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~ 92 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILEV 92 (196)
T ss_dssp CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHHh
Confidence 368899999999987 8899999999873 3899999987431 1112233 2221123344444444
Q ss_pred hCC-CccEEEe-----ccCCh------------HHHHHHHHHhccCCccEEEec
Q 017052 260 TDG-GADYSFE-----CIGDT------------GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~-~~d~vid-----~~g~~------------~~~~~~~~~l~~~~G~~v~~g 295 (378)
.++ .+|+|+. +++.. ..+..+.+.|+++ |+++...
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 145 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKT 145 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEe
Confidence 444 8999993 33321 4567788899997 9988763
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0048 Score=55.27 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=64.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHH----HHHhCCCcEEe---CCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCE----KAKAFGVTEFL---NPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~~~~----~l~~~g~~~vi---~~~~~~~~~~~~i~~~~-- 260 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++. ++.+ .+++.+..... |.. +..+..+.+.+..
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLS-DESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTT-SHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCC-CHHHHHHHHHHHHHH
Confidence 5789999988 9999999999999999 888887763 2222 23345544432 222 1222333333322
Q ss_pred CCCccEEEeccCCh--------------------------HHHHHHHHHhccCCccEEEeccCC
Q 017052 261 DGGADYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 261 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.+++|+++++.|.. ...+.++..+.++ |++|.++...
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~~ 188 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSIQ 188 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCGG
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECChh
Confidence 24799999988731 0122334456665 8999987543
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0022 Score=56.13 Aligned_cols=78 Identities=22% Similarity=0.291 Sum_probs=50.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhCCCcE-Ee--CCCCCCchHHHHHHHHh--CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~--~~~l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++ .+.+++.+... .+ |.. +..++.+.+.+.. .+++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLS-DVAQIEALFALAEREFGGV 80 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTT-SHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCC-CHHHHHHHHHHHHHHcCCC
Confidence 4688999988 9999999999999999 89999887651 22333334433 22 332 1223333333322 2379
Q ss_pred cEEEeccC
Q 017052 265 DYSFECIG 272 (378)
Q Consensus 265 d~vid~~g 272 (378)
|++|++.|
T Consensus 81 d~lv~~Ag 88 (255)
T 2q2v_A 81 DILVNNAG 88 (255)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0039 Score=55.46 Aligned_cols=79 Identities=22% Similarity=0.195 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHhCCCcE-E--eCCCCCCchH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCEK----AKAFGVTE-F--LNPNDNNEPV 252 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~------------~~~~~~----l~~~g~~~-v--i~~~~~~~~~ 252 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++ .++.+. ++..+... . .|..+ ..+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD-RAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC-HHHH
Confidence 5789999988 9999999999999999 89998876 443332 23344433 2 24431 2233
Q ss_pred HHHHHHHh--CCCccEEEeccCC
Q 017052 253 QQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 253 ~~~i~~~~--~~~~d~vid~~g~ 273 (378)
.+.+.+.. .+++|++|++.|.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 33333332 2379999998874
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0026 Score=57.15 Aligned_cols=78 Identities=23% Similarity=0.277 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCC---cE-E--eCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV---TE-F--LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~---~~-v--i~~~~~~~~~~~~i~~~~- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +.+. .. . .|..+ ..++.+.+.+..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA 102 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC-HHHHHHHHHHHHH
Confidence 5788999988 9999999999999999 8999999987765432 2332 22 2 24431 223333333322
Q ss_pred -CCCccEEEeccC
Q 017052 261 -DGGADYSFECIG 272 (378)
Q Consensus 261 -~~~~d~vid~~g 272 (378)
.+++|++|++.|
T Consensus 103 ~~g~iD~lvnnAG 115 (297)
T 1xhl_A 103 KFGKIDILVNNAG 115 (297)
T ss_dssp HHSCCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 247999999887
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0026 Score=55.31 Aligned_cols=79 Identities=22% Similarity=0.266 Sum_probs=54.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE-eCCCCCCchHHHHHHHHh--CCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~d~v 267 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++...+ .|..+ ..++.+.+.+.. .+++|++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999998 9999999999999999 899999998876654 34553322 24431 223333333322 2378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|++.|.
T Consensus 82 vn~Ag~ 87 (245)
T 1uls_A 82 VHYAGI 87 (245)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999873
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0095 Score=51.07 Aligned_cols=75 Identities=15% Similarity=0.088 Sum_probs=50.4
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE---EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE---FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~---vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
+++||+|+ |++|.+++..+...|+ +|+.+++++++.+.+.+ ++... ..|.. +.+..+.+.+.....+|++++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLA--SHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTT--CHHHHHHHHHSCSSCCSEEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCC--CHHHHHHHHHHHhhcCCEEEE
Confidence 47899988 9999999999999999 89999999888766644 43221 22333 333222222222234599999
Q ss_pred ccC
Q 017052 270 CIG 272 (378)
Q Consensus 270 ~~g 272 (378)
+.|
T Consensus 79 ~Ag 81 (230)
T 3guy_A 79 SAG 81 (230)
T ss_dssp CCC
T ss_pred eCC
Confidence 887
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0014 Score=57.72 Aligned_cols=79 Identities=14% Similarity=0.156 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhCCCcEE-eCCCCCCchHHHHHHHHh--CCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~d~v 267 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++ .+.+++.+...+ .|..+ ..++.+.+.+.. .+++|++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC-ETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS-HHHHHHHHHHHHHHCSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence 4689999988 9999999999999999 78888887765 344555665332 24431 233333333332 2479999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
+++.|.
T Consensus 104 v~nAg~ 109 (260)
T 3gem_A 104 VHNASE 109 (260)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999873
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0033 Score=55.20 Aligned_cols=78 Identities=15% Similarity=0.227 Sum_probs=53.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCC--CcE-EeCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFG--VTE-FLNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g--~~~-vi~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. .+. ... ..|..+ ..++.+.+.+.. .+++|
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK-RASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC-HHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 8999999988766543 342 221 224431 223333333322 23799
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
++|++.|
T Consensus 89 ~lv~~Ag 95 (263)
T 3ak4_A 89 LLCANAG 95 (263)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999987
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0053 Score=54.01 Aligned_cols=79 Identities=20% Similarity=0.299 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC-----CCc-EE--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF-----GVT-EF--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~-----g~~-~v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ +++ +.. .. .|..+ ..++.+.+....
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC-HHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 899999988765433 222 111 12 24331 223333333322
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 84 ~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 84 FGRLDILVNNAGV 96 (267)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2378999999874
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0032 Score=55.22 Aligned_cols=78 Identities=23% Similarity=0.328 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC-----CCc-EE--eCCCCCCchHHHHHHHHhCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF-----GVT-EF--LNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~-----g~~-~v--i~~~~~~~~~~~~i~~~~~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. ++ +.. .. .|..+ ..++.+.+.+....
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE-PGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC-HHHHHHHHHHHHHh
Confidence 5789999988 9999999999988999 8999999887655432 22 212 22 24431 23333444443332
Q ss_pred -CccEEEeccC
Q 017052 263 -GADYSFECIG 272 (378)
Q Consensus 263 -~~d~vid~~g 272 (378)
++|++|++.|
T Consensus 84 ~gid~lv~~Ag 94 (260)
T 2z1n_A 84 GGADILVYSTG 94 (260)
T ss_dssp TCCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 4999999987
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0024 Score=55.62 Aligned_cols=79 Identities=23% Similarity=0.241 Sum_probs=53.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH-HHHhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE-KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~-~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++ ++.+ .+++.+... . .|..+ ..++.+.+.+.. .+++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999988 9999999999999999 899998886 5543 445555432 2 24331 223333333322 2479
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++|++.|.
T Consensus 84 d~lv~nAg~ 92 (249)
T 2ew8_A 84 DILVNNAGI 92 (249)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999998873
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0031 Score=55.00 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=53.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----C--C--CcEE--eCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--G--VTEF--LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~--g--~~~v--i~~~~~~~~~~~~i~~~~- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ . + .... .|..+ ..+..+.+.+..
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD-CTKADTEIKDIHQ 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC-HHHHHHHHHHHHH
Confidence 5789999988 9999999999988999 89999999887655432 1 2 1122 24431 233333333332
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|+++++.|.
T Consensus 84 ~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 84 KYGAVDILVNAAAM 97 (250)
T ss_dssp HHCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 2479999999884
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0023 Score=56.06 Aligned_cols=79 Identities=19% Similarity=0.265 Sum_probs=54.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+. +++... . .|..+ ..++.+.+.+.. .+++|
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISK-EADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHhcCCCC
Confidence 5789999988 9999999999999999 8999999988876554 344332 2 23331 233333333332 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 86 ~li~~Ag~ 93 (261)
T 3n74_A 86 ILVNNAGI 93 (261)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99998873
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0032 Score=55.00 Aligned_cols=81 Identities=22% Similarity=0.227 Sum_probs=53.5
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----C-C-CcE--EeCCCCCC-chHHHHHHHHh-
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F-G-VTE--FLNPNDNN-EPVQQVIKRIT- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~-g-~~~--vi~~~~~~-~~~~~~i~~~~- 260 (378)
-.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ . + ... ..|....+ .+..+.+.+..
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 46889999988 9999999999999999 89999999887654432 1 1 112 23331112 22333333322
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|+++++.|.
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 2479999999874
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.006 Score=52.68 Aligned_cols=74 Identities=14% Similarity=0.247 Sum_probs=51.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C-CCcEE-eCCCCCCchHHHHHHHHhC--CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F-GVTEF-LNPNDNNEPVQQVIKRITD--GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~-g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~ 266 (378)
+++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ + +...+ .|.. +.+ .+.++.. +++|+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~~~---~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLG--DWD---ATEKALGGIGPVDL 79 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--CHH---HHHHHHTTCCCCSE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCC--CHH---HHHHHHHHcCCCCE
Confidence 5789999998 9999999999999999 89999998877655433 3 33222 2332 222 2232222 36899
Q ss_pred EEeccC
Q 017052 267 SFECIG 272 (378)
Q Consensus 267 vid~~g 272 (378)
+|++.|
T Consensus 80 vi~~Ag 85 (244)
T 1cyd_A 80 LVNNAA 85 (244)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 999987
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0023 Score=55.64 Aligned_cols=79 Identities=22% Similarity=0.214 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-Ee--CCCCCCchHHHHHHHHhCCCcc
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FL--NPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-vi--~~~~~~~~~~~~i~~~~~~~~d 265 (378)
-.++++|||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ +.... ++ |.. +...+.+.+.+. +++|
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~--~~id 86 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLA-NKEECSNLISKT--SNLD 86 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTT-SHHHHHHHHHTC--SCCS
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCC-CHHHHHHHHHhc--CCCC
Confidence 457899999988 9999999999999999 89999999888766543 43322 22 332 112222222221 3799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|.+.|.
T Consensus 87 ~li~~Ag~ 94 (249)
T 3f9i_A 87 ILVCNAGI 94 (249)
T ss_dssp EEEECCC-
T ss_pred EEEECCCC
Confidence 99999873
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0089 Score=46.55 Aligned_cols=76 Identities=22% Similarity=0.390 Sum_probs=53.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+.+|+|+|+|.+|..+++.+...|. +|+++++++++.+.+++ ++...+. +.. +. +.+.+..-.++|+|+.++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~d~~--~~---~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVINGDCT--KI---KTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEESCTT--SH---HHHHHTTTTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEcCCC--CH---HHHHHcCcccCCEEEEee
Confidence 4579999999999999999998998 89999999988877664 5654332 221 11 223322223789999999
Q ss_pred CChH
Q 017052 272 GDTG 275 (378)
Q Consensus 272 g~~~ 275 (378)
+...
T Consensus 78 ~~~~ 81 (140)
T 1lss_A 78 GKEE 81 (140)
T ss_dssp SCHH
T ss_pred CCch
Confidence 8753
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0013 Score=58.03 Aligned_cols=79 Identities=19% Similarity=0.185 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+..-.... ..|..+ ..++.+.+.+.. .+++|++|
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~lv 92 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD-KYTFDTAITRAEKIYGPADAIV 92 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC-HHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC-HHHHHHHHHHHHHHCCCCCEEE
Confidence 4789999988 9999999999999999 8999999877665432221111 224431 233333333332 23789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 93 nnAg~ 97 (266)
T 3p19_A 93 NNAGM 97 (266)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99884
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0043 Score=54.76 Aligned_cols=101 Identities=17% Similarity=0.251 Sum_probs=63.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+ .++.++.+.+ +..+.... .|..+ ..++.+.+.+.. .
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD-PAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999888999 77766 5555544433 33444332 24431 223333333332 2
Q ss_pred CCccEEEeccCCh----------H---------------HHHHHHHHhccCCccEEEecc
Q 017052 262 GGADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+++|+++++.|.. + ..+.++..+.++ |++|.++.
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS 162 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMST 162 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeC
Confidence 3799999998741 1 233445566665 99998875
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0024 Score=56.22 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=49.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh---HHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK---CEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~---~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~- 260 (378)
.++++||+|+ +++|.++++.+...|+ +|+.+.++.+. .+.+ ++.+.... .|..+ ..+..+.+.+..
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN-EEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence 5789999988 9999999999999999 88887665433 2222 22343332 24431 223333333332
Q ss_pred -CCCccEEEeccC
Q 017052 261 -DGGADYSFECIG 272 (378)
Q Consensus 261 -~~~~d~vid~~g 272 (378)
.+++|+++++.|
T Consensus 88 ~~g~iD~lvnnAg 100 (262)
T 3ksu_A 88 EFGKVDIAINTVG 100 (262)
T ss_dssp HHCSEEEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 247999999988
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0024 Score=55.85 Aligned_cols=79 Identities=28% Similarity=0.324 Sum_probs=54.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++... . .|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999999999 899999998776544 3444322 2 24331 233333333332 23799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 82 ~lv~nAg~ 89 (254)
T 1hdc_A 82 GLVNNAGI 89 (254)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998873
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0032 Score=54.44 Aligned_cols=75 Identities=21% Similarity=0.337 Sum_probs=52.1
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHh--CCCccEEEe
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSFE 269 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~~~d~vid 269 (378)
++++||+|+ |++|.++++.+...|+ +|+.+++++++ ..+.++...+ .|.. +.+..+.+.+.. .+++|++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~g~id~lv~ 76 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLE--KDDPKGLVKRALEALGGLHVLVH 76 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTT--TSCHHHHHHHHHHHHTSCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCc--hHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999998 9999999999999999 89999888776 3344553222 2443 234444443322 237999999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 77 ~Ag~ 80 (239)
T 2ekp_A 77 AAAV 80 (239)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8873
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0026 Score=55.79 Aligned_cols=79 Identities=19% Similarity=0.305 Sum_probs=54.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++++... . .|..+ ..++.+.+.+.. .+++|
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR-QDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 899999988876544 3454332 2 24431 223333333322 23799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 85 ~lv~~Ag~ 92 (259)
T 4e6p_A 85 ILVNNAAL 92 (259)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999884
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0026 Score=56.55 Aligned_cols=79 Identities=15% Similarity=0.228 Sum_probs=54.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++++... . .|..+ ..+..+.+.+.. .+++|
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS-AKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 899999998876554 3345433 2 24431 223333333332 23799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 104 ~lv~nAg~ 111 (277)
T 4dqx_A 104 VLVNNAGF 111 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999883
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0068 Score=50.87 Aligned_cols=102 Identities=13% Similarity=0.102 Sum_probs=70.5
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~ 259 (378)
.....++++++||-+|+|. |..++.+++.....++++++.+++..+.+++ .+.+. ++..+ ..+. +.
T Consensus 33 l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~~---~~-- 104 (204)
T 3e05_A 33 LSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF--APEG---LD-- 104 (204)
T ss_dssp HHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC--TTTT---CT--
T ss_pred HHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC--hhhh---hh--
Confidence 3566788999999999974 8888899988644499999999998887765 34332 22221 1010 00
Q ss_pred hCCCccEEEeccC---ChHHHHHHHHHhccCCccEEEecc
Q 017052 260 TDGGADYSFECIG---DTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 260 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..+.+|+|+.... -...+..+.+.|+++ |+++....
T Consensus 105 ~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 143 (204)
T 3e05_A 105 DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV 143 (204)
T ss_dssp TSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred cCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence 0137999997654 235678889999997 99987643
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0027 Score=56.44 Aligned_cols=79 Identities=19% Similarity=0.197 Sum_probs=54.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+.+ ++... . .|..+ ..+..+.+.+.. .+++|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRS-LQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcCCCC
Confidence 5789999988 9999999999999999 89999999887765543 44333 2 23331 223333333322 24799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 82 ~lvnnAg~ 89 (281)
T 3zv4_A 82 TLIPNAGI 89 (281)
T ss_dssp EEECCCCC
T ss_pred EEEECCCc
Confidence 99999873
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0029 Score=55.87 Aligned_cols=80 Identities=21% Similarity=0.382 Sum_probs=53.8
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H----hCCCcE-E--eCCCCCCchHHHHHHHHh--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-K----AFGVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~----~~g~~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
..++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ + ..+... . .|..+ ..++.+.+.+..
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEK 96 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 35789999988 9999999999999999 899999988765433 2 224432 2 24431 223333333322
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 97 ~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 97 FGKLDTVVNAAGI 109 (267)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 2479999999873
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0055 Score=54.69 Aligned_cols=77 Identities=25% Similarity=0.263 Sum_probs=54.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE-Ee--CCCCCCchHHHHHHHHhCCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FL--NPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~-vi--~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ ++... .+ |.. +..++.+.+.++ +++|++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~v~~~~~~~--~~iD~l 90 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQ-DLSSVRRFADGV--SGADVL 90 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTT-CHHHHHHHHHTC--CCEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCC-CHHHHHHHHHhc--CCCCEE
Confidence 6789999988 9999999999999999 89999999888776544 44322 22 333 122233333332 478999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|++.|.
T Consensus 91 v~nAg~ 96 (291)
T 3rd5_A 91 INNAGI 96 (291)
T ss_dssp EECCCC
T ss_pred EECCcC
Confidence 999873
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0036 Score=55.44 Aligned_cols=79 Identities=15% Similarity=0.213 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC---C---Cc-EE--eCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF---G---VT-EF--LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~---g---~~-~v--i~~~~~~~~~~~~i~~~~- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. ++ . .. .. .|..+ ..++.+.+.+..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~ 82 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG 82 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC-HHHHHHHHHHHHH
Confidence 4788999988 9999999999988999 8999999987765432 22 2 11 12 24431 223333333322
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 2379999999874
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0094 Score=50.66 Aligned_cols=97 Identities=8% Similarity=0.105 Sum_probs=62.8
Q ss_pred CeEEEEcc-ChHHHHHHHHHH-HcCCCeEEEEcCChh-hHHHHHhCCCc-EEe--CCCCCCchHHHHHHHHhCCCccEEE
Q 017052 195 STVVIFGL-GTVGLSVAQGAK-ARGASRIIGVDTNPE-KCEKAKAFGVT-EFL--NPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~-~~g~~~vi~v~~~~~-~~~~l~~~g~~-~vi--~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
++|||+|+ |.+|..+++.+. ..|+ +|++++++++ +.+.+...+.. .++ |.. +. +.+.+... ++|++|
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--d~---~~~~~~~~-~~d~vv 78 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQ--NP---GXLEQAVT-NAEVVF 78 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTT--CH---HHHHHHHT-TCSEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCC--CH---HHHHHHHc-CCCEEE
Confidence 56999998 999999998887 8999 8999999988 76655322222 223 332 22 22333222 689999
Q ss_pred eccCChHH-HHHHHHHhccC-CccEEEeccCC
Q 017052 269 ECIGDTGM-ITTALQSCCDG-WGLAVTLGVPK 298 (378)
Q Consensus 269 d~~g~~~~-~~~~~~~l~~~-~G~~v~~g~~~ 298 (378)
++.|.... ...+++.+... .+++|.++...
T Consensus 79 ~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 79 VGAMESGSDMASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp ESCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EcCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence 99986211 34445555432 26888887554
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0028 Score=55.80 Aligned_cols=78 Identities=27% Similarity=0.282 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC-----CCcE-E--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF-----GVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~-----g~~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. ++ +... . .|..+ ..++.+.+.+..
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER 89 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5789999988 9999999999988999 8999999887765432 21 3322 2 24431 223333333322
Q ss_pred CCCccEEEeccC
Q 017052 261 DGGADYSFECIG 272 (378)
Q Consensus 261 ~~~~d~vid~~g 272 (378)
.+++|++|++.|
T Consensus 90 ~g~id~lv~nAg 101 (267)
T 1iy8_A 90 FGRIDGFFNNAG 101 (267)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 237999999887
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0027 Score=55.97 Aligned_cols=79 Identities=22% Similarity=0.362 Sum_probs=54.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+... . .|..+ ..+..+.+.+.. .
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE-PDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-TTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 89999999877654322 34332 2 24432 334444444332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 379999998873
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0031 Score=55.94 Aligned_cols=79 Identities=19% Similarity=0.264 Sum_probs=53.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ..++.+.+.+.. .+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ-PDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 8999999887655432 333322 2 24431 233333333332 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 109 ~iD~lvnnAg~ 119 (276)
T 3r1i_A 109 GIDIAVCNAGI 119 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0039 Score=55.12 Aligned_cols=79 Identities=18% Similarity=0.299 Sum_probs=53.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEe--CCCCCCchHHHHHHHHh--CCCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi--~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++.....+ |..+ ..++.+.+.+.. .+++|+
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~ 85 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRLDC 85 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 5789999988 9999999999999999 8999999988766543 34322222 3331 223333333322 247999
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|++.|.
T Consensus 86 lv~nAg~ 92 (270)
T 1yde_A 86 VVNNAGH 92 (270)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998863
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0029 Score=55.54 Aligned_cols=79 Identities=29% Similarity=0.448 Sum_probs=53.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC----CCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF----GVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~----g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++ +... . .|..+ ..++.+.+.+.. .
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT-PEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4789999988 9999999999999999 8999999887655432 22 4332 2 24431 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999873
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0031 Score=54.84 Aligned_cols=77 Identities=16% Similarity=0.211 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe--CCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.++.....+ |.. +.+..+.+.+. .+++|++|+
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~-~~~id~lv~ 80 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVT--KKKQIDQFANE-VERLDVLFN 80 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTT--CHHHHHHHHHH-CSCCSEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCC--CHHHHHHHHHH-hCCCCEEEE
Confidence 4789999988 9999999999999999 899999988776554444221222 333 32222222221 247999999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 81 ~Ag~ 84 (246)
T 2ag5_A 81 VAGF 84 (246)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8873
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.008 Score=55.04 Aligned_cols=49 Identities=41% Similarity=0.542 Sum_probs=42.6
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
-+|++|.|.|.|.+|+.+++.++..|+ +|++.+.++++.+..+.+++..
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~ 221 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTA 221 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEE
Confidence 579999999999999999999999999 8999998887766777777643
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.011 Score=50.51 Aligned_cols=112 Identities=14% Similarity=0.092 Sum_probs=67.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh-hH-HHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KC-EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~-~~-~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
-.|++|||+|+|.+|...++.+...|+ .|++++.+.. .. +++++.+. ..+.-.-...+ -.++|+||-
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i-~~i~~~~~~~d---------L~~adLVIa 97 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQL-RVKRKKVGEED---------LLNVFFIVV 97 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSC-EEECSCCCGGG---------SSSCSEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCc-EEEECCCCHhH---------hCCCCEEEE
Confidence 367899999999999999999999999 7888865432 22 33333333 23321100111 127899999
Q ss_pred ccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEE
Q 017052 270 CIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 316 (378)
Q Consensus 270 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 316 (378)
+++.+.. ...+...++. |..|.+-+.+...++-++...-..++++
T Consensus 98 AT~d~~~-N~~I~~~ak~-gi~VNvvD~p~~~~f~~Paiv~rg~l~i 142 (223)
T 3dfz_A 98 ATNDQAV-NKFVKQHIKN-DQLVNMASSFSDGNIQIPAQFSRGRLSL 142 (223)
T ss_dssp CCCCTHH-HHHHHHHSCT-TCEEEC-----CCSEECCEEEEETTEEE
T ss_pred CCCCHHH-HHHHHHHHhC-CCEEEEeCCcccCeEEEeeEEEeCCEEE
Confidence 9988654 4444444555 9998887766555665555442234444
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0072 Score=53.74 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=52.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCC-----CcE-EeCCCCCCchHHHHHHHHhCCCc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG-----VTE-FLNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g-----~~~-vi~~~~~~~~~~~~i~~~~~~~~ 264 (378)
-.++++||+|+|++|.+++..+...|+++|+.+.++.++.+.+ ++++ ... ..++ .++.+.+. .+
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~----~~l~~~l~-----~~ 195 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA----RGIEDVIA-----AA 195 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS----TTHHHHHH-----HS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH----HHHHHHHh-----cC
Confidence 4688999999999999999999999997799999999887654 3332 111 2222 23444343 47
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+||+|+..
T Consensus 196 DiVInaTp~ 204 (283)
T 3jyo_A 196 DGVVNATPM 204 (283)
T ss_dssp SEEEECSST
T ss_pred CEEEECCCC
Confidence 999999863
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0033 Score=54.76 Aligned_cols=78 Identities=24% Similarity=0.313 Sum_probs=53.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ..++.+.+.+.. .+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD-RQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 8999999887765432 234332 2 24431 223333333322 24
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|++.|
T Consensus 84 ~id~lv~nAg 93 (247)
T 2jah_A 84 GLDILVNNAG 93 (247)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999887
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0032 Score=54.94 Aligned_cols=97 Identities=19% Similarity=0.236 Sum_probs=63.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhC--CCccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD--GGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~--~~~d~vid 269 (378)
-++++||+|+ |++|.++++.+...|+ +|++++++.++.+. ....++.. +..+..+.+.+... +++|++|.
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~-d~~~v~~~~~~~~~~~g~iD~li~ 93 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDS-GEEEIKSVIEKINSKSIKVDTFVC 93 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCS-SHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999988 9999999999999999 89999888765321 11223333 13344444444433 37899999
Q ss_pred ccCCh-----------H---------------HHHHHHHHhccCCccEEEeccC
Q 017052 270 CIGDT-----------G---------------MITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 270 ~~g~~-----------~---------------~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+.|.. + ..+.+...+.++ |++|.++..
T Consensus 94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~ 146 (251)
T 3orf_A 94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGAS 146 (251)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEech
Confidence 98830 0 123344556665 899988754
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0019 Score=56.40 Aligned_cols=79 Identities=28% Similarity=0.437 Sum_probs=54.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcE---EeCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~---vi~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+.+ ++... ..|..+ ..+..+.+.+.. .+++|
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN-PESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHCCCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 89999999887665533 33221 234431 233333333332 24799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 86 ~lv~nAg~ 93 (248)
T 3op4_A 86 ILVNNAGI 93 (248)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999873
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0027 Score=55.64 Aligned_cols=78 Identities=26% Similarity=0.325 Sum_probs=54.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+... . .|..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN-TDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 89999999887665543 23222 2 24431 223333333332 24
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|+++++.|
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999988
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0023 Score=56.46 Aligned_cols=79 Identities=23% Similarity=0.325 Sum_probs=54.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE-e--CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v-i--~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++++.... + |..+ ..++.+.+.+.. .+++|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSD-RKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS-HHHHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 899999988876554 44554432 2 3331 223333333322 24799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 104 ~lvnnAg~ 111 (266)
T 3grp_A 104 ILVNNAGI 111 (266)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0024 Score=56.35 Aligned_cols=79 Identities=22% Similarity=0.266 Sum_probs=54.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEE---eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+.... .|..+ ..+..+.+.+.. .+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD-RHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999988 9999999999999999 8999999987765442 3344332 24431 223333333332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0065 Score=52.91 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=51.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
-..++++||+|+ |++|.++++.+...|+ +|++++++++. +++++....+ .+- ..+....+.++. ++|++|+
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~-~D~-~~~~~~~~~~~~--~iD~lv~ 87 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV-CDL-RKDLDLLFEKVK--EVDILVL 87 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE-CCT-TTCHHHHHHHSC--CCSEEEE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE-eeH-HHHHHHHHHHhc--CCCEEEE
Confidence 346889999998 9999999999999999 89999888744 3445533333 221 223433333332 7899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 88 ~Ag~ 91 (249)
T 1o5i_A 88 NAGG 91 (249)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9873
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0044 Score=54.78 Aligned_cols=79 Identities=16% Similarity=0.281 Sum_probs=53.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHH---HhC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKR---ITD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~---~~~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++.+.+.+ ...
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 899999998765433 2234332 2 24331 2223333322 222
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 589999999874
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0016 Score=57.97 Aligned_cols=79 Identities=19% Similarity=0.274 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C----CCc-EE--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVT-EF--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~----g~~-~v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+.+ + +.. .. .|..+ ..++.+.+.+.. .
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD-PDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 6789999988 9999999999999999 89999999877654432 2 211 22 34431 233333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999999874
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0044 Score=54.34 Aligned_cols=79 Identities=18% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhCCCcE-E--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~----l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.+ .++.++.+. +++.+... . .|..+ ..+..+.+.+...
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN-AAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 5789999988 9999999999999999 78777 555554332 33344332 2 24431 2233333333322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 85 g~id~lv~nAg~ 96 (259)
T 3edm_A 85 GEIHGLVHVAGG 96 (259)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478999998863
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0031 Score=56.10 Aligned_cols=78 Identities=18% Similarity=0.287 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C---CCcEE-e--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F---GVTEF-L--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~---g~~~v-i--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ + +.... + |.. +..+....+.+.. .+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVG-DEALHEALVELAVRRFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTT-CHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-CHHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 89999999887655432 2 33322 2 332 1223333333322 23
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|++.|
T Consensus 85 ~iD~lvnnAg 94 (280)
T 3tox_A 85 GLDTAFNNAG 94 (280)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999987
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0036 Score=56.25 Aligned_cols=80 Identities=24% Similarity=0.296 Sum_probs=55.0
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
-.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ..++.+.+.+.. .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH-LDEMVRLADEAFRLL 106 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhC
Confidence 36889999998 9999999999999999 8999999988765443 234332 2 24431 223333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 107 g~id~lvnnAg~ 118 (301)
T 3tjr_A 107 GGVDVVFSNAGI 118 (301)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999999883
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0027 Score=55.46 Aligned_cols=79 Identities=19% Similarity=0.265 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHhC-CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRITD-GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~~-~~ 263 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ..++.+.+.+... ++
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN-EDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC-HHHHHHHHHHHHhhCC
Confidence 5789999988 9999999999999999 8999999887755432 334432 2 24431 2223322322211 58
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++++.|.
T Consensus 84 id~lv~nAg~ 93 (252)
T 3h7a_A 84 LEVTIFNVGA 93 (252)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEECCCc
Confidence 9999999884
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0029 Score=55.64 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=53.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCC-c-EEe--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGV-T-EFL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~-~-~vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++.+. . ..+ |..+ ..++.+.+.+.. .
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD-RAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 5789999988 9999999999999999 899999998876543 23332 2 222 3331 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 87 g~id~lvnnAg~ 98 (262)
T 3pk0_A 87 GGIDVVCANAGV 98 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999873
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0036 Score=54.57 Aligned_cols=79 Identities=24% Similarity=0.328 Sum_probs=53.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+... . .|..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD-PESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 89999999887655432 34322 2 23331 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999874
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0039 Score=55.35 Aligned_cols=79 Identities=20% Similarity=0.304 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++.+... . .|..+ ..+..+.+.+.. .+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS-TDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999989999 899999998876543 2334433 2 24431 223333333332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 101 ~id~lv~nAg~ 111 (279)
T 3sju_A 101 PIGILVNSAGR 111 (279)
T ss_dssp SCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 78999999874
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0026 Score=56.23 Aligned_cols=79 Identities=19% Similarity=0.247 Sum_probs=54.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE---EeCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~---vi~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++... ..|..+ ..++.+.+.+.. .+++|
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN-EVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 899999988776544 3444332 234431 233333333322 23799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 88 ~lv~nAg~ 95 (271)
T 3tzq_B 88 IVDNNAAH 95 (271)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998874
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0031 Score=57.27 Aligned_cols=78 Identities=19% Similarity=0.234 Sum_probs=53.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCC--cE-E--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV--TE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~--~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.+++|||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+. .. + .|..+ ..++.+.+....
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS-REGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 5789999998 9999999999999999 89999999887654432 232 11 2 24431 233433343332
Q ss_pred CCCccEEEeccC
Q 017052 261 DGGADYSFECIG 272 (378)
Q Consensus 261 ~~~~d~vid~~g 272 (378)
.+++|++|++.|
T Consensus 85 ~g~id~lv~nAg 96 (319)
T 3ioy_A 85 FGPVSILCNNAG 96 (319)
T ss_dssp TCCEEEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 247899999988
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0045 Score=54.43 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=54.7
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+. +.+... .+ |..+ ..+..+.+.+.. .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD-DAQVAHLVDETMKAY 86 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 46889999988 9999999999999999 8999999987765442 334333 22 4431 223333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 87 g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 GRVDVVINNAFR 98 (264)
T ss_dssp SCCSEEEECCCS
T ss_pred CCCcEEEECCCC
Confidence 479999998864
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0046 Score=54.42 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=54.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++... . .|..+ ..++.+.+.+.. .+++|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHHcCCCc
Confidence 5789999988 9999999999999999 899999998876654 3444222 2 24431 223333333322 23789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 83 ~lvnnAg~ 90 (263)
T 2a4k_A 83 GVAHFAGV 90 (263)
T ss_dssp EEEEGGGG
T ss_pred EEEECCCC
Confidence 99998873
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0038 Score=54.17 Aligned_cols=79 Identities=24% Similarity=0.344 Sum_probs=54.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ..++.+.+.+.. .+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISD-IESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 8999999987765443 334433 2 24331 233333444432 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999999874
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.004 Score=54.69 Aligned_cols=79 Identities=28% Similarity=0.402 Sum_probs=53.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. +.+... . .|..+ ..++.+.+.+.. .+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence 5789999988 9999999999999999 8999999887665432 234332 2 24431 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.004 Score=55.11 Aligned_cols=79 Identities=20% Similarity=0.335 Sum_probs=54.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE-e--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v-i--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++.+.... + |.. +..++.+.+.+.. .+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVT-SESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-CHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC-CHHHHHHHHHHHHHHCC
Confidence 5789999988 9999999999999999 899999988775543 33454332 2 332 1223333333322 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 103 ~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 DVDILVNNAGI 113 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999883
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.002 Score=55.83 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=68.1
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh---
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT--- 260 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~--- 260 (378)
....++++||-+|+| .|..++.+++..+ ..++++++.+++..+.+++ .|....+... ..+..+.+..+.
T Consensus 56 ~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~--~~d~~~~~~~~~~~~ 132 (239)
T 2hnk_A 56 TKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLK--LGSALETLQVLIDSK 132 (239)
T ss_dssp HHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHCS
T ss_pred HHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEE--ECCHHHHHHHHHhhc
Confidence 345678899999987 5888889999873 2399999999988877765 3543211111 112223333221
Q ss_pred -----------C-CCccEEEeccCCh---HHHHHHHHHhccCCccEEEe
Q 017052 261 -----------D-GGADYSFECIGDT---GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 -----------~-~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~ 294 (378)
. +.||+|+...+.. ..+..+.+.|+++ |+++..
T Consensus 133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~ 180 (239)
T 2hnk_A 133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIAD 180 (239)
T ss_dssp SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 2 5799998665543 4567888999997 998875
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0035 Score=55.10 Aligned_cols=80 Identities=19% Similarity=0.267 Sum_probs=54.5
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
..++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+... + .|..+ ..++.+.+.... .
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH-SDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHhc
Confidence 35789999988 9999999999989999 8999999988765442 334332 2 23331 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999999874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0039 Score=55.26 Aligned_cols=79 Identities=15% Similarity=0.256 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++.+... . .|..+ ..++.+.+.+.. .+
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999999999999 899999988765433 2234332 2 24431 223333333322 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0043 Score=53.33 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=52.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEe--CCCCCCchHHHHHHHHh--CCCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi--~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+. +++....+ |..+ ..++.+.+.+.. .+++|+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVRE-EGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 3578999988 9999999999999999 8999999888766543 34322222 3331 233333333322 137899
Q ss_pred EEeccC
Q 017052 267 SFECIG 272 (378)
Q Consensus 267 vid~~g 272 (378)
+|++.|
T Consensus 82 li~~Ag 87 (234)
T 2ehd_A 82 LVNNAG 87 (234)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999987
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.006 Score=52.49 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----hCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-----AFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-----~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. ..+... .+ |..+ ..++.+.+.+.. .
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK-AESVEEFSKKVLERF 78 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHCC-HHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC-HHHHHHHHHHHHHhc
Confidence 3678999988 9999999999999999 8999999987765442 234333 22 3331 222222222221 1
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 79 g~id~li~~Ag~ 90 (235)
T 3l77_A 79 GDVDVVVANAGL 90 (235)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 378999999874
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0024 Score=56.70 Aligned_cols=79 Identities=19% Similarity=0.372 Sum_probs=54.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++++... . .|..+ ..+..+.+.+.. .+++|
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD-EQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC-HHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 899999998876554 3444322 2 24431 223333333322 23799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 106 ~lvnnAg~ 113 (277)
T 3gvc_A 106 KLVANAGV 113 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999874
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0037 Score=54.77 Aligned_cols=79 Identities=20% Similarity=0.229 Sum_probs=53.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ..+..+.+.+.. .+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD-EQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999988999 8999999887765442 344433 2 23331 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 89 ~id~lv~nAg~ 99 (256)
T 3gaf_A 89 KITVLVNNAGG 99 (256)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.005 Score=53.98 Aligned_cols=78 Identities=14% Similarity=0.266 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHH---hC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRI---TD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~---~~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++.+... . .|..+ ..++.+.+.+. ..
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999989999 899999988765433 2234332 2 24431 22333333322 22
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|+++++.|
T Consensus 86 g~id~lv~~Ag 96 (260)
T 2ae2_A 86 GKLNILVNNAG 96 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999999987
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0051 Score=53.32 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=53.7
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCC--cEEe--CCCCCC-chHHHHHHHHh-
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV--TEFL--NPNDNN-EPVQQVIKRIT- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~--~~vi--~~~~~~-~~~~~~i~~~~- 260 (378)
-.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +.+. ..++ +.+..+ .++.+.+.+..
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 36789999988 9999999999999999 8999999988765443 3332 2222 332112 22333333322
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 91 ~~g~id~lv~nAg~ 104 (247)
T 3i1j_A 91 EFGRLDGLLHNASI 104 (247)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 2379999998874
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0051 Score=54.77 Aligned_cols=79 Identities=15% Similarity=0.203 Sum_probs=54.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+... . .|..+ ..+..+.+.+.. .+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD-ELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5789999988 9999999999999999 89999999887654432 23322 2 23331 233333333332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998874
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0029 Score=56.72 Aligned_cols=79 Identities=16% Similarity=0.222 Sum_probs=53.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---CCCcE--E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A---FGVTE--F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~---~g~~~--v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. + .+... . .|..+ ..+..+.+.+.. .
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD-PGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 8999999887655432 2 33112 2 24431 223333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 118 g~iD~lvnnAg~ 129 (293)
T 3rih_A 118 GALDVVCANAGI 129 (293)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 478999998873
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0035 Score=54.99 Aligned_cols=79 Identities=25% Similarity=0.353 Sum_probs=52.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHH-HhC----CCcE-Ee--CCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKA-KAF----GVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~~~l-~~~----g~~~-vi--~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++ .+.+ +.+ +... .+ |..+ ..++.+.+.+..
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ 80 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4788999988 9999999999999999 89999888766 4433 222 4332 22 3331 223333333322
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 81 ~g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 81 MGRIDILVNNAGI 93 (260)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2479999998873
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0041 Score=54.98 Aligned_cols=79 Identities=23% Similarity=0.312 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE---EeCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE---FLNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~---vi~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. +.+... ..|..+ ..++.+.+.+.. .+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND-ATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 8999999987765432 233322 234431 223333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 105 ~iD~lvnnAg~ 115 (270)
T 3ftp_A 105 ALNVLVNNAGI 115 (270)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0033 Score=54.49 Aligned_cols=79 Identities=20% Similarity=0.327 Sum_probs=53.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+.+ .+... .+ |..+ ..++.+.+.+.. .
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS-EESINKAFEEIYNLV 83 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC-HHHHHHHHHHHHHhc
Confidence 4788999988 9999999999988999 89999998876654322 24322 22 3331 233333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 84 ~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 84 DGIDILVNNAGI 95 (248)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999998873
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0036 Score=55.40 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=53.6
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
..++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++++... . .|..+ ..++.+.+.+.. .+++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD-PDSVRALFTATVEKFGRV 103 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence 35788999988 9999999999999999 899999998876554 3344322 2 24431 223333333322 2479
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++++.|.
T Consensus 104 D~lVnnAg~ 112 (272)
T 4dyv_A 104 DVLFNNAGT 112 (272)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999998874
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0031 Score=57.98 Aligned_cols=80 Identities=23% Similarity=0.364 Sum_probs=54.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHhCCCcEE---eCCCCCCchHHHHH
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-----------CEKAKAFGVTEF---LNPNDNNEPVQQVI 256 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-----------~~~l~~~g~~~v---i~~~~~~~~~~~~i 256 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+.++++.++ .+.+++.+.... .|..+ ..++.+.+
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~ 120 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD-EQQISAAV 120 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHH
Confidence 36899999988 9999999999999999 89998887653 334445554332 24431 23333333
Q ss_pred HHHhC--CCccEEEeccCC
Q 017052 257 KRITD--GGADYSFECIGD 273 (378)
Q Consensus 257 ~~~~~--~~~d~vid~~g~ 273 (378)
.+... +++|++|++.|.
T Consensus 121 ~~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 33322 479999999884
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0055 Score=53.55 Aligned_cols=78 Identities=17% Similarity=0.280 Sum_probs=50.8
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh-CCCcE-E--eCCCCCCchHHHHHHHHh--CCCc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~-~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
|+++||+|+ +++|.++++.+... |+ .|+.+++++++.+.+.+ ++... . .|..+ ..+..+.+.+.. .+++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE-DSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHhcCCc
Confidence 578999988 99999998776655 46 88889899887665543 44332 2 24431 223333333322 2479
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++++.|.
T Consensus 80 d~lvnnAg~ 88 (254)
T 3kzv_A 80 DSLVANAGV 88 (254)
T ss_dssp CEEEEECCC
T ss_pred cEEEECCcc
Confidence 999998874
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0018 Score=56.25 Aligned_cols=75 Identities=23% Similarity=0.275 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhCCCcEE---eCCCCCCchHHHHHHHH-hCCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAFGVTEF---LNPNDNNEPVQQVIKRI-TDGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~~~~~l~~~g~~~v---i~~~~~~~~~~~~i~~~-~~~~~d 265 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.++++. +..+.+++.|.... .|..+ ... +++. ..+++|
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d-~~~----v~~~~~~g~iD 81 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFAD-PLA----AKDSFTDAGFD 81 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS-TTT----TTTSSTTTCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC-HHH----HHHHHHhCCCC
Confidence 6899999987 9999999999999999 888888864 44566677776542 23332 111 1221 235899
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 82 iLVNNAGi 89 (247)
T 4hp8_A 82 ILVNNAGI 89 (247)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0073 Score=54.59 Aligned_cols=100 Identities=13% Similarity=0.199 Sum_probs=71.2
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCc---EEeCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVT---EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~---~vi~~~~~~~~~~~~i~ 257 (378)
+.+...+.++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++. |.. .++..+ ..
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~------- 150 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--WE------- 150 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--GG-------
T ss_pred HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--hH-------
Confidence 44666788999999999876 8888899988888 999999999988877653 332 122211 11
Q ss_pred HHhCCCccEEEec-----cCC---hHHHHHHHHHhccCCccEEEeccC
Q 017052 258 RITDGGADYSFEC-----IGD---TGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 258 ~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++ ++.+|+|+.. ++. ...+..+.+.|+++ |+++.....
T Consensus 151 ~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~ 196 (318)
T 2fk8_A 151 DF-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV 196 (318)
T ss_dssp GC-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred HC-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence 11 2479999865 332 34677888999997 998876543
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0013 Score=56.79 Aligned_cols=99 Identities=18% Similarity=0.198 Sum_probs=69.3
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~~i~~~ 259 (378)
.+...+.++++||.+|+| .|..++.+++..+. +|++++.+++..+.+++ .|...+ +..+ . ...+
T Consensus 84 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d-----~---~~~~ 153 (235)
T 1jg1_A 84 LEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGD-----G---SKGF 153 (235)
T ss_dssp HHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC-----G---GGCC
T ss_pred HHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC-----c---ccCC
Confidence 355678899999999998 68889999998874 89999999988777765 444332 2111 1 0111
Q ss_pred hCC-CccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 260 TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+ ++|+|+.+..-......+.+.|+++ |+++..-
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~ 189 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV 189 (235)
T ss_dssp GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred CCCCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence 223 5999997665444556788899997 9877653
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0055 Score=54.36 Aligned_cols=79 Identities=22% Similarity=0.253 Sum_probs=52.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHH----HHHhCCCcEE---eCCCCCCchH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCE----KAKAFGVTEF---LNPNDNNEPV 252 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~------------~~~~~----~l~~~g~~~v---i~~~~~~~~~ 252 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++ .++.+ .++..+.... .|..+ ..++
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v 86 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD-RAAL 86 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHH
Confidence 5789999988 9999999999999999 89999886 33322 2334554332 24431 2233
Q ss_pred HHHHHHHh--CCCccEEEeccCC
Q 017052 253 QQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 253 ~~~i~~~~--~~~~d~vid~~g~ 273 (378)
.+.+.+.. .+++|+++++.|.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 33333322 2479999998873
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0039 Score=55.26 Aligned_cols=78 Identities=18% Similarity=0.332 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC---CCcEEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTEFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~---g~~~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ +++ +.-..+ |.. +..++.+.+.+.. .++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLS-SEAGARRLAQALGELSAR 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTT-SHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCC-CHHHHHHHHHHHHHhcCC
Confidence 5789999998 9999999999999999 899999988776543 222 311222 332 1223333333322 247
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|++|++.|
T Consensus 106 iD~lvnnAg 114 (276)
T 2b4q_A 106 LDILVNNAG 114 (276)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0066 Score=53.40 Aligned_cols=79 Identities=18% Similarity=0.148 Sum_probs=53.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCc-E-E--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVT-E-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~-~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+.+ .+.. . . .|..+ ..+..+.+.+..
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD-ALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence 5789999988 9999999999999999 89999999877654322 3332 2 2 24431 223333333322
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|+++++.|.
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2478999999874
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.006 Score=53.22 Aligned_cols=90 Identities=19% Similarity=0.275 Sum_probs=56.5
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHHHH----HhCCCc-EEeCCCCCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-------------------EKCEKA----KAFGVT-EFLNPNDNN 249 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~-------------------~~~~~l----~~~g~~-~vi~~~~~~ 249 (378)
+.+|+|+|+|++|..+++.+...|..+++.++.+. .|.+.+ +++... .+..+.. .
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~-~ 109 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA-L 109 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS-C
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec-c
Confidence 57899999999999999999999988899998886 555544 233332 2211111 1
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhcc
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD 286 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~ 286 (378)
... +.+.++. .++|+|++|++..+....+.+.+..
T Consensus 110 ~~~-~~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 110 LDD-AELAALI-AEHDLVLDCTDNVAVRNQLNAGCFA 144 (249)
T ss_dssp CCH-HHHHHHH-HTSSEEEECCSSHHHHHHHHHHHHH
T ss_pred CCH-hHHHHHH-hCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 111 1122221 1689999999886554444444443
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0023 Score=55.27 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=62.6
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
.++|||+|+ |.+|..+++.+...| + +|+++++++++.+.+..-++..+ .|.. +.+ .+.++.. ++|+||.+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~--d~~---~~~~~~~-~~D~vv~~ 95 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVL--NHA---ALKQAMQ-GQDIVYAN 95 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTT--CHH---HHHHHHT-TCSEEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCC--CHH---HHHHHhc-CCCEEEEc
Confidence 368999998 999999999999999 7 89999998876543322222222 2332 222 2333222 68999999
Q ss_pred cCChHH---HHHHHHHhccC-CccEEEeccCC
Q 017052 271 IGDTGM---ITTALQSCCDG-WGLAVTLGVPK 298 (378)
Q Consensus 271 ~g~~~~---~~~~~~~l~~~-~G~~v~~g~~~ 298 (378)
.+.... ...++..+... .+++|.++...
T Consensus 96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence 886432 23345555432 36899887643
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0053 Score=54.20 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..++..+...|+ +|+++++++++.+.+ ++.+... . .|..+ ..++.+.+.+.. .+
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC-HHHHHHHHHHHHHHCC
Confidence 5789999998 9999999999999999 899999988765543 2334332 2 23331 223333333322 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 79999999873
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0057 Score=54.87 Aligned_cols=78 Identities=23% Similarity=0.299 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHH----HHHhCCCcEE---eCCCCCCchH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCE----KAKAFGVTEF---LNPNDNNEPV 252 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~------------~~~~~----~l~~~g~~~v---i~~~~~~~~~ 252 (378)
.|+++||+|+ +++|.++++.+...|+ +|++++++ .++.+ .++..+.... .|..+ ..+.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD-FDAM 104 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHH
Confidence 5789999988 9999999999999999 89988876 33332 2344554332 24431 2233
Q ss_pred HHHHHHHh--CCCccEEEeccC
Q 017052 253 QQVIKRIT--DGGADYSFECIG 272 (378)
Q Consensus 253 ~~~i~~~~--~~~~d~vid~~g 272 (378)
.+.+.+.. .+++|++|++.|
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEECCC
Confidence 33333322 247999999887
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0051 Score=53.74 Aligned_cols=78 Identities=23% Similarity=0.417 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... . .|..+ ..++.+.+.+.. .+
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN-TESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 899999988765432 2334322 2 23331 223333333322 23
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 90 ~id~vi~~Ag 99 (260)
T 3awd_A 90 RVDILVACAG 99 (260)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999887
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0024 Score=55.90 Aligned_cols=79 Identities=19% Similarity=0.365 Sum_probs=48.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++... . .|..+ ..+..+.+.+.. .+++|
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTN-EADATAALAFAKQEFGHVH 83 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999988 9999999999999999 899998887765443 3344322 2 23331 223333333322 23799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 84 ~lv~nAg~ 91 (257)
T 3tpc_A 84 GLVNCAGT 91 (257)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998873
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0056 Score=53.71 Aligned_cols=78 Identities=17% Similarity=0.227 Sum_probs=53.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCc-EE--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT-EF--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~-~v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ +.+... .. .|..+ ..++.+.+.+.. .+++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD 83 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGLH 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999988999 899999988776554 334322 12 24431 233333333322 23799
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
++|++.|
T Consensus 84 ~lv~~Ag 90 (260)
T 1nff_A 84 VLVNNAG 90 (260)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999887
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0052 Score=54.42 Aligned_cols=80 Identities=25% Similarity=0.260 Sum_probs=52.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHhCCCcEE---eCCCCCCch
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCEK----AKAFGVTEF---LNPNDNNEP 251 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~------------~~~~~~----l~~~g~~~v---i~~~~~~~~ 251 (378)
-.|+++||+|+ |++|.++++.+...|+ +|+.++++ .++.+. ++..+.... .|..+ ..+
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~ 88 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD-RES 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC-HHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC-HHH
Confidence 36789999988 9999999999999999 89998876 444332 233444332 23331 233
Q ss_pred HHHHHHHHh--CCCccEEEeccCC
Q 017052 252 VQQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 252 ~~~~i~~~~--~~~~d~vid~~g~ 273 (378)
+.+.+.+.. .+++|++|++.|.
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 333333322 2479999999874
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0045 Score=54.97 Aligned_cols=79 Identities=25% Similarity=0.439 Sum_probs=53.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCC---cE-E--eCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGV---TE-F--LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~---~~-v--i~~~~~~~~~~~~i~~~~- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.+. .. . .|..+ ..+..+.+.+..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN-EDETARAVDAVTA 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC-HHHHHHHHHHHHH
Confidence 5789999988 9999999999999999 899999988765433 33443 11 2 24331 223333333332
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|+++++.|.
T Consensus 88 ~~g~id~lv~nAg~ 101 (281)
T 3svt_A 88 WHGRLHGVVHCAGG 101 (281)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 2479999999884
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0014 Score=56.42 Aligned_cols=100 Identities=16% Similarity=0.222 Sum_probs=67.6
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHHHh-
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~~~- 260 (378)
....++++||-+|+| .|..++.+++.....++++++.+++..+.+++ .|.. .++..+ ... .+....
T Consensus 50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~---~~~~~~~ 123 (233)
T 2gpy_A 50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD--ALQ---LGEKLEL 123 (233)
T ss_dssp HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC--GGG---SHHHHTT
T ss_pred HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC--HHH---HHHhccc
Confidence 345678899999987 68888899988733399999999998887765 3542 223221 111 122222
Q ss_pred CCCccEEEeccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 261 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+.||+|+..... ...+..+.+.|+++ |+++...
T Consensus 124 ~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~ 160 (233)
T 2gpy_A 124 YPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN 160 (233)
T ss_dssp SCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence 3479998865442 35677888899997 9988763
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.006 Score=53.97 Aligned_cols=78 Identities=18% Similarity=0.168 Sum_probs=51.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcE-E--eCCCCCCchHHHHHHHH-h-CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-F--LNPNDNNEPVQQVIKRI-T-DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~-v--i~~~~~~~~~~~~i~~~-~-~~~ 263 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++++..+.+++ .+... . .|.. +.+..+.+.+. . .++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~--d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLA--DLEGAANVAEELAATRR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTT--CHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCC--CHHHHHHHHHHHHhcCC
Confidence 5789999988 9999999999999999 89888876655444443 33322 2 2333 22222222221 1 147
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 107 iD~lv~nAg~ 116 (273)
T 3uf0_A 107 VDVLVNNAGI 116 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 9999998874
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0057 Score=54.01 Aligned_cols=78 Identities=22% Similarity=0.394 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC---cEEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---TEFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~---~~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ ++++. -.++ |..+ ..++.+.+.+.. .++
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 92 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGK 92 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999989999 899998987765433 33432 1222 3331 223333333322 237
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|++|++.|
T Consensus 93 id~li~~Ag 101 (278)
T 2bgk_A 93 LDIMFGNVG 101 (278)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCc
Confidence 999999887
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0037 Score=55.43 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=54.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+. .++... . .|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTD-GERIDVVAADVLARYGRVD 81 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 4688999988 9999999999999999 8999999887765543 344322 2 23331 223333333332 23799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 82 ~lv~~Ag~ 89 (281)
T 3m1a_A 82 VLVNNAGR 89 (281)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999874
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0036 Score=55.59 Aligned_cols=78 Identities=22% Similarity=0.260 Sum_probs=52.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCC---c-EE--eCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV---T-EF--LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~---~-~v--i~~~~~~~~~~~~i~~~~- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +.+. . .. .|..+ ..++.+.+.+..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK 82 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC-HHHHHHHHHHHHH
Confidence 5788999988 9999999999999999 8999999987765432 2232 2 22 24431 223333333322
Q ss_pred -CCCccEEEeccC
Q 017052 261 -DGGADYSFECIG 272 (378)
Q Consensus 261 -~~~~d~vid~~g 272 (378)
.+++|++|++.|
T Consensus 83 ~~g~iD~lv~nAg 95 (280)
T 1xkq_A 83 QFGKIDVLVNNAG 95 (280)
T ss_dssp HHSCCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 237999999887
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.012 Score=53.15 Aligned_cols=76 Identities=17% Similarity=0.211 Sum_probs=52.3
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHHH-h----CCCc-EEeCCCCCCchHHHHHHHHhCC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---PEKCEKAK-A----FGVT-EFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~---~~~~~~l~-~----~g~~-~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
-.|+++||+|+|++|.+++..+...|+++|+++.|+ .++.+.+. + .+.. .++.+++ ..++.+.+.
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~-~~~l~~~l~----- 225 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED-HEQLRKEIA----- 225 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHH-----
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch-HHHHHhhhc-----
Confidence 368999999999999999999999999789999998 66655442 2 2322 2344431 122322222
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|+||+|+..
T Consensus 226 ~aDiIINaTp~ 236 (315)
T 3tnl_A 226 ESVIFTNATGV 236 (315)
T ss_dssp TCSEEEECSST
T ss_pred CCCEEEECccC
Confidence 58999999863
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0037 Score=52.98 Aligned_cols=99 Identities=19% Similarity=0.265 Sum_probs=69.2
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcC--CCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG--ASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIK 257 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g--~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~ 257 (378)
.....+.++++||.+|+| .|..+..+++..| . ++++++.+++..+.+++ .+.+. ++..+ ...
T Consensus 70 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d-----~~~--- 139 (215)
T 2yxe_A 70 CELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDG-LVVSIERIPELAEKAERTLRKLGYDNVIVIVGD-----GTL--- 139 (215)
T ss_dssp HHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTS-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC-----GGG---
T ss_pred HHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC-----ccc---
Confidence 355678899999999997 4888999999886 5 89999999988877765 24332 22211 100
Q ss_pred HHh-CCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 258 RIT-DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
... .+.+|+|+....-......+.+.|+++ |+++..-
T Consensus 140 ~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~ 177 (215)
T 2yxe_A 140 GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPV 177 (215)
T ss_dssp CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred CCCCCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEE
Confidence 111 237999997665444456788899997 9987663
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0053 Score=53.65 Aligned_cols=77 Identities=17% Similarity=0.222 Sum_probs=52.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ +..+... . .|..+ ..++.+.+.+.. .++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 578999988 9999999999999999 899999988765543 2234322 2 24431 223333333322 247
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|++|++.|
T Consensus 80 id~lv~nAg 88 (256)
T 1geg_A 80 FDVIVNNAG 88 (256)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0051 Score=50.20 Aligned_cols=102 Identities=17% Similarity=0.190 Sum_probs=69.8
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EE-eCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EF-LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~v-i~~~~~~~~~~~~i~~~~ 260 (378)
....+.++++||.+|+|. |..++.+++..+..++++++.+++..+.+++ .+.+ .+ +..+ ... .+.. .
T Consensus 19 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d--~~~---~~~~-~ 91 (178)
T 3hm2_A 19 SALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQG--APR---AFDD-V 91 (178)
T ss_dssp HHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECC--TTG---GGGG-C
T ss_pred HHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecc--hHh---hhhc-c
Confidence 555788999999999975 8889999988743399999999988887764 4544 22 2211 111 1111 1
Q ss_pred CCCccEEEeccCC--hHHHHHHHHHhccCCccEEEecc
Q 017052 261 DGGADYSFECIGD--TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 261 ~~~~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+.+|+|+..... ...+..+.+.|+++ |+++....
T Consensus 92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 128 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV 128 (178)
T ss_dssp CSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred CCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence 1479999955433 24788899999997 99887643
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0079 Score=52.61 Aligned_cols=79 Identities=11% Similarity=0.272 Sum_probs=52.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C---C-------C-cEEe--CCCCCCchHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F---G-------V-TEFL--NPNDNNEPVQQVIK 257 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~---g-------~-~~vi--~~~~~~~~~~~~i~ 257 (378)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+.+ + + . -..+ |..+ ...+.+.+.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~ 83 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSE-ARAARCLLE 83 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTS-HHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCC-HHHHHHHHH
Confidence 5789999988 9999999999988999 89999999877655432 2 1 1 1222 3331 223333333
Q ss_pred HHh--CCCc-cEEEeccCC
Q 017052 258 RIT--DGGA-DYSFECIGD 273 (378)
Q Consensus 258 ~~~--~~~~-d~vid~~g~ 273 (378)
... .+++ |++|.+.|.
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~ 102 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGI 102 (264)
T ss_dssp HHHHHHSSCCSEEEECCCC
T ss_pred HHHHHhCCCCeEEEECCCc
Confidence 322 1356 999999873
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0082 Score=55.54 Aligned_cols=93 Identities=17% Similarity=0.153 Sum_probs=63.9
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+|+|+|+|.+|..+++.+.. .. .|.+++++.++.+.+++......+|.. +. +.+.++.. +.|+|++|++..
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~--d~---~~l~~~~~-~~DvVi~~~p~~ 88 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDAS--NF---DKLVEVMK-EFELVIGALPGF 88 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTT--CH---HHHHHHHT-TCSEEEECCCGG
T ss_pred cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecC--CH---HHHHHHHh-CCCEEEEecCCc
Confidence 479999999999998887754 34 788889999999888765443344443 22 22333322 689999999875
Q ss_pred HHHHHHHHHhccCCccEEEecc
Q 017052 275 GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 275 ~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
-....+-.|+..+ -.++++..
T Consensus 89 ~~~~v~~~~~~~g-~~yvD~s~ 109 (365)
T 3abi_A 89 LGFKSIKAAIKSK-VDMVDVSF 109 (365)
T ss_dssp GHHHHHHHHHHHT-CEEEECCC
T ss_pred ccchHHHHHHhcC-cceEeeec
Confidence 4444555666664 67777753
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0036 Score=53.53 Aligned_cols=64 Identities=17% Similarity=0.257 Sum_probs=46.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.++++||+|+ +++|.++++.+...|+ +|+.++++.+ .|..+ ..++.+.+.++ +++|+++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~-~~~v~~~~~~~--g~id~lv~nA 67 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD-EKSVYHYFETI--GAFDHLIVTA 67 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC-HHHHHHHHHHH--CSEEEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC-HHHHHHHHHHh--CCCCEEEECC
Confidence 4788999988 9999999999888899 8999987654 33331 22333333333 5789999888
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
|.
T Consensus 68 g~ 69 (223)
T 3uce_A 68 GS 69 (223)
T ss_dssp CC
T ss_pred CC
Confidence 73
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0064 Score=51.86 Aligned_cols=97 Identities=18% Similarity=0.235 Sum_probs=60.7
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
++|||+|+ |.+|..+++.+...|. +|+++++++++.+.+. ..-.++..+ -.+ .+.+.++.. ++|+||.+.|.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~D--l~d-~~~~~~~~~-~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKAD--VSS-LDEVCEVCK-GADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC--TTEEEECCC--TTC-HHHHHHHHT-TCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc--CceEEEEec--CCC-HHHHHHHhc-CCCEEEEeCcC
Confidence 68999998 9999999999999998 9999999987653321 111233222 111 122333322 68999999876
Q ss_pred h-----------HHHHHHHHHhccC-CccEEEeccCC
Q 017052 274 T-----------GMITTALQSCCDG-WGLAVTLGVPK 298 (378)
Q Consensus 274 ~-----------~~~~~~~~~l~~~-~G~~v~~g~~~ 298 (378)
. .....+++.+... ..+++.++...
T Consensus 78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 3 1223344555443 14788887543
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0035 Score=55.84 Aligned_cols=79 Identities=23% Similarity=0.347 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHhCCCcE-Ee--CCCCCCchHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-----------CEKAKAFGVTE-FL--NPNDNNEPVQQVIK 257 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-----------~~~l~~~g~~~-vi--~~~~~~~~~~~~i~ 257 (378)
.++++||+|+ +++|.++++.+...|+ +|+.++++.++ .+.+++.+... .+ |..+ ..+..+.+.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~ 85 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD-GDAVAAAVA 85 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS-HHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHH
Confidence 5789999988 9999999999999999 89999888652 23334445433 22 4431 223333333
Q ss_pred HHh--CCCccEEEeccCC
Q 017052 258 RIT--DGGADYSFECIGD 273 (378)
Q Consensus 258 ~~~--~~~~d~vid~~g~ 273 (378)
+.. .+++|++|++.|.
T Consensus 86 ~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 332 2379999999874
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.005 Score=54.70 Aligned_cols=97 Identities=14% Similarity=0.034 Sum_probs=63.4
Q ss_pred eEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+|||+|+ |.+|..+++.+... |. +|+++.+++++...+...+...+ .|.. +. +.+.+... ++|+||.+.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~--d~---~~l~~~~~-~~d~vi~~a~ 74 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYF--NQ---ESMVEAFK-GMDTVVFIPS 74 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTT--CH---HHHHHHTT-TCSEEEECCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCC--CH---HHHHHHHh-CCCEEEEeCC
Confidence 6999998 99999999998877 88 89999999887655544454433 2333 22 23333322 7899999987
Q ss_pred Ch-------HHHHHHHHHhccC-CccEEEeccCCC
Q 017052 273 DT-------GMITTALQSCCDG-WGLAVTLGVPKL 299 (378)
Q Consensus 273 ~~-------~~~~~~~~~l~~~-~G~~v~~g~~~~ 299 (378)
.. .....+++.+... .++++.++....
T Consensus 75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~ 109 (289)
T 3e48_A 75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD 109 (289)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC
Confidence 42 2233445555443 257888876543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0051 Score=53.88 Aligned_cols=78 Identities=27% Similarity=0.367 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE-E--eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ ++++... + .|..+ ..++.+.+.+.. .+++|
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id 88 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS-EKDVQTALALAKGKFGRVD 88 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHCCCCC
Confidence 5789999998 9999999999999999 899998887765543 4444332 2 23331 223333333322 23799
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
++|++.|
T Consensus 89 ~li~~Ag 95 (265)
T 2o23_A 89 VAVNCAG 95 (265)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999887
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.013 Score=55.09 Aligned_cols=96 Identities=17% Similarity=0.297 Sum_probs=67.8
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.+.+|+|.|.|.+|+.+++.++..|. .|++++.++++.+.+++.|...+.-.. .+. +.+++.--..+|+|+-+++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~GDa-t~~---~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYGDA-TRM---DLLESAGAAKAEVLINAID 77 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEESCT-TCH---HHHHHTTTTTCSEEEECCS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEcCC-CCH---HHHHhcCCCccCEEEECCC
Confidence 34679999999999999999999999 899999999999999999876554221 122 2344432237899999998
Q ss_pred ChHHHH---HHHHHhccCCccEEEe
Q 017052 273 DTGMIT---TALQSCCDGWGLAVTL 294 (378)
Q Consensus 273 ~~~~~~---~~~~~l~~~~G~~v~~ 294 (378)
....-. ...+.+.++ .+++.-
T Consensus 78 ~~~~n~~i~~~ar~~~p~-~~Iiar 101 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPH-LQIIAR 101 (413)
T ss_dssp SHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred ChHHHHHHHHHHHHhCCC-CeEEEE
Confidence 754322 334445554 455543
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0032 Score=55.05 Aligned_cols=75 Identities=15% Similarity=0.042 Sum_probs=51.1
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---CCCcEEeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTEFLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---~g~~~vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
+++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+.+ .+...... + ..++.+.+.+.. .+++|++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d--~~~v~~~~~~~~~~~g~iD~lv 77 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-S--EQEPAELIEAVTSAYGQVDVLV 77 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-C--CCSHHHHHHHHHHHHSCCCEEE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-C--HHHHHHHHHHHHHHhCCCCEEE
Confidence 47899988 9999999999999999 89999888876654432 34333221 2 333433333322 24799999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 78 ~nAg~ 82 (254)
T 1zmt_A 78 SNDIF 82 (254)
T ss_dssp EECCC
T ss_pred ECCCc
Confidence 98874
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0039 Score=55.94 Aligned_cols=74 Identities=14% Similarity=0.125 Sum_probs=53.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCc--EEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
-.+++|+|+|+|++|.+++..+...|+.+|+++.++.++.+ +++.++.. .+++ + +.+.+.. .++|+||
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~-~~~~~~~-~~aDivI 209 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------L-AEAETRL-AEYDIII 209 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------H-HHHHHTG-GGCSEEE
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------H-HHHHhhh-ccCCEEE
Confidence 36889999999999999999999999878999999988865 44556542 2221 1 1222211 2689999
Q ss_pred eccCCh
Q 017052 269 ECIGDT 274 (378)
Q Consensus 269 d~~g~~ 274 (378)
+|++.+
T Consensus 210 n~t~~~ 215 (297)
T 2egg_A 210 NTTSVG 215 (297)
T ss_dssp ECSCTT
T ss_pred ECCCCC
Confidence 999863
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0099 Score=52.79 Aligned_cols=79 Identities=22% Similarity=0.288 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhC-CCcE-Ee--CCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAF-GVTE-FL--NPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l----~~~-g~~~-vi--~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++ +.++.+.+ ++. +... .+ |.. +..++.+.+.+..
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT-KPSEIADMMAMVADR 101 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTT-CHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCC-CHHHHHHHHHHHHHH
Confidence 4789999988 9999999999999999 8999988 54444333 222 3222 22 333 1223333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|+++++.|.
T Consensus 102 ~g~iD~lv~nAg~ 114 (281)
T 3v2h_A 102 FGGADILVNNAGV 114 (281)
T ss_dssp TSSCSEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 2479999999874
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0047 Score=53.64 Aligned_cols=79 Identities=22% Similarity=0.324 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++ ++++.+.+ ++.+... . .|..+ ..++.+.+.+.. .
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN-AEDVTNMVKQTVDVF 80 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4788999988 9999999999999999 8888888 76655433 2334332 2 24431 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 81 g~id~lv~nAg~ 92 (246)
T 2uvd_A 81 GQVDILVNNAGV 92 (246)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999873
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0073 Score=54.14 Aligned_cols=78 Identities=15% Similarity=0.213 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---------CCCcE-E--eCCCCCCchHHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---------FGVTE-F--LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~---------~g~~~-v--i~~~~~~~~~~~~i~~~ 259 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+ .+... . .|..+ ..++.+.+...
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC-HHHHHHHHHHH
Confidence 5789999988 9999999999999999 89999998876654321 12222 2 23331 22333333332
Q ss_pred h--CCCccEEEeccC
Q 017052 260 T--DGGADYSFECIG 272 (378)
Q Consensus 260 ~--~~~~d~vid~~g 272 (378)
. .+++|++|++.|
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 2 137999999987
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0055 Score=54.19 Aligned_cols=78 Identities=14% Similarity=0.129 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHH-hC----CCcE-E--eCCCCCC----chHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAK-AF----GVTE-F--LNPNDNN----EPVQQVIKR 258 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l~-~~----g~~~-v--i~~~~~~----~~~~~~i~~ 258 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++ ++++.+.+. ++ +... . .|..+ . .++.+.+.+
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL-SSSLLDCCEDIIDC 87 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-STTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC-ccccHHHHHHHHHH
Confidence 5788999988 9999999999999999 8999988 776654332 22 4322 2 24432 2 333333333
Q ss_pred Hh--CCCccEEEeccC
Q 017052 259 IT--DGGADYSFECIG 272 (378)
Q Consensus 259 ~~--~~~~d~vid~~g 272 (378)
.. .+++|++|++.|
T Consensus 88 ~~~~~g~id~lv~nAg 103 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNAS 103 (276)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 22 237999999987
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.005 Score=53.92 Aligned_cols=79 Identities=14% Similarity=0.254 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ ++.+... . .|..+ ..++.+.+.+.. .+
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK-AEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999999999 899999988765433 2334332 2 23331 223333333222 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|++.|.
T Consensus 91 ~iD~lv~~Ag~ 101 (260)
T 2zat_A 91 GVDILVSNAAV 101 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0079 Score=53.33 Aligned_cols=80 Identities=25% Similarity=0.322 Sum_probs=52.9
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-------------ChhhHHHH----HhCCCcEE---eCCCCCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-------------NPEKCEKA----KAFGVTEF---LNPNDNNE 250 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-------------~~~~~~~l----~~~g~~~v---i~~~~~~~ 250 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+++++ +.++.+.+ ++.+.... .|..+ ..
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~ 90 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD-DA 90 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-HH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HH
Confidence 46899999988 9999999999999999 8998877 45544433 33444332 24431 23
Q ss_pred hHHHHHHHHh--CCCccEEEeccCC
Q 017052 251 PVQQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 251 ~~~~~i~~~~--~~~~d~vid~~g~ 273 (378)
+..+.+.+.. .+++|+++++.|.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3333333322 2479999999874
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0049 Score=53.60 Aligned_cols=79 Identities=19% Similarity=0.312 Sum_probs=53.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE--E--eCCCCCCchHHHHHHHHh-CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE--F--LNPNDNNEPVQQVIKRIT-DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~--v--i~~~~~~~~~~~~i~~~~-~~~~d 265 (378)
.++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ ++++... . .|..+ ..++.+.+.+.. .+++|
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD-AEAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC-HHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC-HHHHHHHHHHHHhhCCCc
Confidence 5789999988 9999999999999999 899999998776544 3344322 2 24331 223333332221 24799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 88 ~li~~Ag~ 95 (254)
T 2wsb_A 88 ILVNSAGI 95 (254)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99998873
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0077 Score=52.98 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=60.6
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+++++|+|+|++|.+++..+...|. +|+++.|+.++.+.+.+++.. ...++ + + ..+|+||+|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~--~--l---------~~~DiVInaTp~ 182 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEP--P--K---------SAFDLIINATSA 182 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSC--C--S---------SCCSEEEECCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHH--H--h---------ccCCEEEEcccC
Confidence 8999999999999999999999995 999999999988766577743 33443 1 1 068999999864
Q ss_pred hH----HH--HHHHHHhccCCccEEEec
Q 017052 274 TG----MI--TTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 274 ~~----~~--~~~~~~l~~~~G~~v~~g 295 (378)
.. .+ ..+...++++ ..++++-
T Consensus 183 Gm~~~~~l~~~~l~~~l~~~-~~v~D~v 209 (269)
T 3phh_A 183 SLHNELPLNKEVLKGYFKEG-KLAYDLA 209 (269)
T ss_dssp CCCCSCSSCHHHHHHHHHHC-SEEEESC
T ss_pred CCCCCCCCChHHHHhhCCCC-CEEEEeC
Confidence 20 11 1122256664 6666653
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0062 Score=54.55 Aligned_cols=78 Identities=14% Similarity=0.183 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC----CCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF----GVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~----g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.+++..+...|+ +|++++++.++.+.+. ++ +... + .|..+ ..++.+.+.... .
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-HHHHHHHHHHHHHHc
Confidence 5789999998 9999999999999999 8999999887655332 22 4322 2 24331 233333333321 2
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|++.|
T Consensus 103 g~id~li~~Ag 113 (302)
T 1w6u_A 103 GHPNIVINNAA 113 (302)
T ss_dssp CSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899999987
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0066 Score=53.21 Aligned_cols=78 Identities=15% Similarity=0.213 Sum_probs=52.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ |++|.++++.+...|+ +|+.+ .++.++.+.+ ++.+... .+ |..+ ..++.+.+.+.. .
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ-PAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 77775 8887765443 2344433 22 3331 223333333322 2
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|++.|
T Consensus 81 g~id~lv~nAg 91 (258)
T 3oid_A 81 GRLDVFVNNAA 91 (258)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899999987
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0073 Score=52.90 Aligned_cols=78 Identities=14% Similarity=0.191 Sum_probs=52.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE-E--eCCCCCCchHHHHHHHHh---C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT---D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~-v--i~~~~~~~~~~~~i~~~~---~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. ..+... . .|..+ ..++.+.+.+.. .
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ-ESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 4788999988 9999999999999999 8999999887655432 224322 2 24331 233333343331 4
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|+++++.|
T Consensus 82 g~id~lvnnAg 92 (260)
T 2qq5_A 82 GRLDVLVNNAY 92 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCceEEEECCc
Confidence 58999999984
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.006 Score=54.05 Aligned_cols=79 Identities=14% Similarity=0.178 Sum_probs=53.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh----CCCcE-E--eCCCCCCchHHHHHHHHh--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA----FGVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~----~g~~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++ .+... . .|..+ ..+..+.+.+..
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA-PPAVMAAVDQALKE 102 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 35789999988 9999999999999999 899999988765433 22 24332 2 24431 223333333332
Q ss_pred CCCccEEEeccC
Q 017052 261 DGGADYSFECIG 272 (378)
Q Consensus 261 ~~~~d~vid~~g 272 (378)
.+++|+++++.|
T Consensus 103 ~g~id~lv~nAg 114 (277)
T 4fc7_A 103 FGRIDILINCAA 114 (277)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 247999999988
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0055 Score=54.27 Aligned_cols=79 Identities=20% Similarity=0.244 Sum_probs=53.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC-CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD-GG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-~~ 263 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..+..+.+.+... ++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE-AGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS-TTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 5789999988 9999999999999999 899998887664433 2334333 2 23332 2333333332211 58
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++++.|.
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0048 Score=54.61 Aligned_cols=79 Identities=20% Similarity=0.261 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHhCCCcE-E--eCCCCCCchHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-----------CEKAKAFGVTE-F--LNPNDNNEPVQQVIK 257 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-----------~~~l~~~g~~~-v--i~~~~~~~~~~~~i~ 257 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.++++.++ .+.++..+... . .|..+ ..+..+.+.
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~ 82 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE-EDQVRAAVA 82 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC-HHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHH
Confidence 5789999988 9999999999999999 89999887643 12223334433 2 24431 223333333
Q ss_pred HHh--CCCccEEEeccCC
Q 017052 258 RIT--DGGADYSFECIGD 273 (378)
Q Consensus 258 ~~~--~~~~d~vid~~g~ 273 (378)
+.. .+++|+++++.|.
T Consensus 83 ~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 332 2479999999884
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0066 Score=53.72 Aligned_cols=78 Identities=28% Similarity=0.346 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..++..+...|+ +|+.++++.++.+.+ +..+... .+ |..+ ..++.+.+.+.. .+
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD-PKSVEETISQQEKDFG 110 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence 5789999988 9999999998888899 899998877654433 2234322 22 3331 223333333322 13
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 111 ~id~li~~Ag 120 (279)
T 3ctm_A 111 TIDVFVANAG 120 (279)
T ss_dssp CCSEEEECGG
T ss_pred CCCEEEECCc
Confidence 6899999876
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0074 Score=50.41 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=59.3
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
++|||+|+ |.+|..+++.+...|. +|+++++++++.+.+..-+...+ .|.. +. +.+.+... ++|+||.+.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~--~~---~~~~~~~~-~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVL--QA---ADVDKTVA-GQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTT--SH---HHHHHHHT-TCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceEEEEecCC--CH---HHHHHHHc-CCCEEEECcc
Confidence 68999998 9999999999988998 99999998876532211122222 2332 22 22333222 5899999988
Q ss_pred ChH----------HHHHHHHHhcc-CCccEEEeccC
Q 017052 273 DTG----------MITTALQSCCD-GWGLAVTLGVP 297 (378)
Q Consensus 273 ~~~----------~~~~~~~~l~~-~~G~~v~~g~~ 297 (378)
... ....+++.+.. +.++++.++..
T Consensus 77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 532 12333444432 22678877653
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0063 Score=55.25 Aligned_cols=80 Identities=24% Similarity=0.307 Sum_probs=51.8
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC----------hhhH----HHHHhCCCcEEe---CCCCCCchHH
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN----------PEKC----EKAKAFGVTEFL---NPNDNNEPVQ 253 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~----------~~~~----~~l~~~g~~~vi---~~~~~~~~~~ 253 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+.++++ .++. +.+++.+..... |.. +..++.
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~ 102 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA-DWDQAA 102 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT-SHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC-CHHHHH
Confidence 36789999988 9999999999999999 89999876 3332 233344543322 222 122333
Q ss_pred HHHHHHh--CCCccEEEeccCC
Q 017052 254 QVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 254 ~~i~~~~--~~~~d~vid~~g~ 273 (378)
+.+.+.. .+++|++|++.|.
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 3333322 2379999999884
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0068 Score=53.75 Aligned_cols=76 Identities=21% Similarity=0.359 Sum_probs=52.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcE-E--eCCCCCCchHHHHHHHHhC-CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-F--LNPNDNNEPVQQVIKRITD-GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~-v--i~~~~~~~~~~~~i~~~~~-~~~d~ 266 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+. +++... + .|..+ ..++.+.+..... +++|+
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTS-EDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHTTSSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCe
Confidence 5789999988 9999999999999999 8999999988766553 455433 2 23331 2334444444422 27899
Q ss_pred EEec
Q 017052 267 SFEC 270 (378)
Q Consensus 267 vid~ 270 (378)
++.+
T Consensus 107 lv~~ 110 (281)
T 3ppi_A 107 AVVA 110 (281)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9887
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.008 Score=53.45 Aligned_cols=79 Identities=23% Similarity=0.262 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC----------------hhhHHHH----HhCCCcEE---eCCCCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN----------------PEKCEKA----KAFGVTEF---LNPNDN 248 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~----------------~~~~~~l----~~~g~~~v---i~~~~~ 248 (378)
.|+++||+|+ +++|.++++.+...|+ +|+.++++ .++.+.+ +..+.... .|..+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~- 87 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD- 87 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC-
Confidence 5889999988 9999999999999999 89988776 4443332 23343332 24431
Q ss_pred CchHHHHHHHHh--CCCccEEEeccCC
Q 017052 249 NEPVQQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 249 ~~~~~~~i~~~~--~~~~d~vid~~g~ 273 (378)
..++.+.+.+.. .+++|++|++.|.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 223333333322 2479999998873
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0064 Score=53.17 Aligned_cols=78 Identities=21% Similarity=0.267 Sum_probs=50.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHH-H---hCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKA-K---AFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~--~~~l-~---~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
++++||+|+ |++|.++++.+...|+ +|+.++++.++ .+.+ + ..+... . .|..+ ..++.+.+.+.. .
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD-KANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 678999988 9999999998888899 89999888766 3322 2 234322 2 24431 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 80 g~iD~lv~nAg~ 91 (258)
T 3a28_C 80 GGFDVLVNNAGI 91 (258)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999998873
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0057 Score=53.08 Aligned_cols=77 Identities=22% Similarity=0.276 Sum_probs=51.5
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC----CCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF----GVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~----g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
++++||+|+ |++|..++..+...|+ +|+++++++++.+.+. ++ +... + .|..+ ..++.+.+.+.. .+
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVAD-EGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence 578999988 9999999999989999 8999999887765442 22 3222 2 23331 223333333322 23
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
++|++|.+.|
T Consensus 80 ~id~li~~Ag 89 (250)
T 2cfc_A 80 AIDVLVNNAG 89 (250)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999886
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0022 Score=54.14 Aligned_cols=99 Identities=14% Similarity=0.077 Sum_probs=67.4
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~ 259 (378)
.+...++++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++ .+.+. ++..+ ... .. .
T Consensus 70 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d--~~~---~~--~ 139 (210)
T 3lbf_A 70 TELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGD--GWQ---GW--Q 139 (210)
T ss_dssp HHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC--GGG---CC--G
T ss_pred HHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECC--ccc---CC--c
Confidence 356678899999999987 47788888887 66 99999999998877765 34432 22221 111 00 0
Q ss_pred hCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.||+|+....-......+.+.|+++ |+++..-
T Consensus 140 ~~~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~ 174 (210)
T 3lbf_A 140 ARAPFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV 174 (210)
T ss_dssp GGCCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred cCCCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence 1247999997654434445678899997 9887653
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0096 Score=52.83 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=52.5
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhCCCcE-E--eCCCCCCchHHHHHHHHhC-
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~----l~~~g~~~-v--i~~~~~~~~~~~~i~~~~~- 261 (378)
..++++||+|+ |++|.++++.+...|+ +|+.+++ +.++.+. ++..+... . .|..+ ..++.+.+.+...
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD-LSSHQATVDAVVAE 104 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS-GGGHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHH
Confidence 46789999988 9999999999999999 8888874 6554433 23344433 2 24432 3344444443322
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 379999999875
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0073 Score=54.18 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=72.1
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~ 257 (378)
+.+...++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++ .|.. .++..+ + .
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d-----~----~ 132 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG-----W----E 132 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC-----G----G
T ss_pred HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC-----H----H
Confidence 44667789999999999975 8888999998887 99999999998877765 3432 122221 1 1
Q ss_pred HHhCCCccEEEeccC-----C----------hHHHHHHHHHhccCCccEEEeccCC
Q 017052 258 RITDGGADYSFECIG-----D----------TGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 258 ~~~~~~~d~vid~~g-----~----------~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++ .+.+|+|+.... . ...+..+.+.|+++ |+++......
T Consensus 133 ~~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~ 186 (302)
T 3hem_A 133 EF-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI 186 (302)
T ss_dssp GC-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred Hc-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence 12 458999886421 1 25677888899997 9998775443
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0067 Score=53.21 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHH---hC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRI---TD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~---~~ 261 (378)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... . .|..+ ..++.+.+.+. ..
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 5788999988 9999999999999999 899999988765443 2234332 2 23331 22233333222 22
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 579999999874
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0033 Score=54.79 Aligned_cols=102 Identities=15% Similarity=0.229 Sum_probs=67.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhCC-C
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG-G 263 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~~-~ 263 (378)
...++++||-+|+|. |..++.+|+.++ ..+|++++.+++..+.+++ .|....+... ..+..+.+..+... .
T Consensus 60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~--~~d~~~~l~~~~~~~~ 136 (248)
T 3tfw_A 60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLR--EGPALQSLESLGECPA 136 (248)
T ss_dssp HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHTCCSCCC
T ss_pred hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHhcCCCCC
Confidence 456789999999864 788888888864 3399999999998877765 3543111111 12333334443332 7
Q ss_pred ccEEE-eccC--ChHHHHHHHHHhccCCccEEEec
Q 017052 264 ADYSF-ECIG--DTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 264 ~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
||+|+ |..- ....+..+.+.|+++ |.++...
T Consensus 137 fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 170 (248)
T 3tfw_A 137 FDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDN 170 (248)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEEC
T ss_pred eEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeC
Confidence 99988 3221 134678888999997 9887654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0066 Score=54.97 Aligned_cols=80 Identities=23% Similarity=0.258 Sum_probs=52.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHH----HHHhCCCcEE---eCCCCCCch
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCE----KAKAFGVTEF---LNPNDNNEP 251 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~------------~~~~~----~l~~~g~~~v---i~~~~~~~~ 251 (378)
-.|+++||+|+ |++|.++++.+...|+ +|++++++ .++.+ .+++.+.... .|..+ ..+
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~ 121 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD-LAS 121 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHH
Confidence 46889999988 9999999999999999 88888765 33332 2334454332 24431 233
Q ss_pred HHHHHHHHh--CCCccEEEeccCC
Q 017052 252 VQQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 252 ~~~~i~~~~--~~~~d~vid~~g~ 273 (378)
+.+.+.+.. .+++|++|++.|.
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 333333332 2479999999873
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.004 Score=54.68 Aligned_cols=80 Identities=15% Similarity=0.250 Sum_probs=52.7
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcC---CCeEEEEcCChhhHHHHHhC---CCcE-E--eCCCCCCchHHHHHHHH--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARG---ASRIIGVDTNPEKCEKAKAF---GVTE-F--LNPNDNNEPVQQVIKRI-- 259 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g---~~~vi~v~~~~~~~~~l~~~---g~~~-v--i~~~~~~~~~~~~i~~~-- 259 (378)
.+++++||+|+ |++|.++++.+...| + +|++++++.++.+.++++ +... + .|..+ ..++.+.+.++
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 96 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEG 96 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC-hHHHHHHHHHHHH
Confidence 35688999988 999999999998889 7 899999987655444432 2222 2 24332 33444433332
Q ss_pred -hCC-CccEEEeccCC
Q 017052 260 -TDG-GADYSFECIGD 273 (378)
Q Consensus 260 -~~~-~~d~vid~~g~ 273 (378)
.+. ++|++|.+.|.
T Consensus 97 ~~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGI 112 (267)
T ss_dssp HHGGGCCSEEEECCCC
T ss_pred hcCCCCccEEEECCCc
Confidence 222 69999999873
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.007 Score=57.91 Aligned_cols=92 Identities=20% Similarity=0.272 Sum_probs=69.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|++|.|+|.|.+|..+++.++.+|+ +|++++++..+.......|... . ++.+.+ ...|+|+-++
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~-~-------~l~ell-----~~aDiVi~~~ 340 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV-V-------TMEYAA-----DKADIFVTAT 340 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE-C-------CHHHHT-----TTCSEEEECS
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe-C-------CHHHHH-----hcCCEEEECC
Confidence 578999999999999999999999999 9999999988754444556532 1 222222 2589999988
Q ss_pred CChHHH-HHHHHHhccCCccEEEeccCC
Q 017052 272 GDTGMI-TTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 272 g~~~~~-~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+....+ ...+..|+++ ..+++++...
T Consensus 341 ~t~~lI~~~~l~~MK~g-AilINvgrg~ 367 (494)
T 3d64_A 341 GNYHVINHDHMKAMRHN-AIVCNIGHFD 367 (494)
T ss_dssp SSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred CcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence 654333 4678889996 8899887654
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.02 Score=52.75 Aligned_cols=109 Identities=17% Similarity=0.215 Sum_probs=73.0
Q ss_pred hhhhhHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC----hhh---------HHHHHhCCCcEE
Q 017052 177 GLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN----PEK---------CEKAKAFGVTEF 242 (378)
Q Consensus 177 ~~~ta~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~----~~~---------~~~l~~~g~~~v 242 (378)
.++.-+.++ +..+ --+..+|+|+|+|..|..+++++..+|+++|+.++++ .+| .+++++...
T Consensus 175 ~lAal~~A~-~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~--- 250 (388)
T 1vl6_A 175 VSAAFLNAL-KLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP--- 250 (388)
T ss_dssp HHHHHHHHH-HHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---
T ss_pred HHHHHHHHH-HHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---
Confidence 333444444 4444 3367899999999999999999999999889999998 544 444444321
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 243 i~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.. ...++.+.++ ++|++|-+++..-.-++.++.|+++ ..++.+..+.
T Consensus 251 --~~-~~~~L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt 297 (388)
T 1vl6_A 251 --ER-LSGDLETALE-----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV 297 (388)
T ss_dssp --TC-CCSCHHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS
T ss_pred --cC-chhhHHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC
Confidence 11 1345555554 4799998887434456677888875 6666665543
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0052 Score=53.15 Aligned_cols=79 Identities=18% Similarity=0.287 Sum_probs=53.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcC--CCeEEEEcCChhhHHHHHhC-CCc-EE--eCCCCCCchHHHHHHHH---hCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTNPEKCEKAKAF-GVT-EF--LNPNDNNEPVQQVIKRI---TDG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g--~~~vi~v~~~~~~~~~l~~~-g~~-~v--i~~~~~~~~~~~~i~~~---~~~ 262 (378)
.++++||+|+ |++|..+++.+...| + +|++++++.++.+.++++ +.. .+ .|..+ ...+.+.+.+. .+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~ 79 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCC-HHHHHHHHHHHHHhcCC
Confidence 3678999988 999999999998899 7 899999998887777665 222 12 23331 22233333322 221
Q ss_pred -CccEEEeccCC
Q 017052 263 -GADYSFECIGD 273 (378)
Q Consensus 263 -~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 80 ~~id~li~~Ag~ 91 (250)
T 1yo6_A 80 DGLSLLINNAGV 91 (250)
T ss_dssp GCCCEEEECCCC
T ss_pred CCCcEEEECCcc
Confidence 68999998863
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.035 Score=49.30 Aligned_cols=87 Identities=20% Similarity=0.316 Sum_probs=61.0
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-|+..+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDvvi~~vp~~ 68 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVVE-----SCPVTFAMLADP 68 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHH-----HCSEEEECCSSH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHh-----cCCEEEEEcCCH
Confidence 478999999999999999999998 89999999999988888775321 12333333 358888888754
Q ss_pred HHHHHHH-------HHhccCCccEEEec
Q 017052 275 GMITTAL-------QSCCDGWGLAVTLG 295 (378)
Q Consensus 275 ~~~~~~~-------~~l~~~~G~~v~~g 295 (378)
......+ ..++++ ..++..+
T Consensus 69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s 95 (287)
T 3pef_A 69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS 95 (287)
T ss_dssp HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence 4444443 445553 4455543
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.01 Score=52.46 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=51.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhCCCc-EEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~-l~~~g~~-~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
++++++|+|+|++|.++++.+...|+ +|+++.++.++.+. ++.++.. .+...+ ..+ +.+ +++|+++++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~--~~~----~~~---~~~DivVn~ 187 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS--MDE----LEG---HEFDLIINA 187 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC--SGG----GTT---CCCSEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec--HHH----hcc---CCCCEEEEC
Confidence 68899999999999999999999997 99999999888654 4455431 111111 111 111 479999999
Q ss_pred cCCh
Q 017052 271 IGDT 274 (378)
Q Consensus 271 ~g~~ 274 (378)
++..
T Consensus 188 t~~~ 191 (271)
T 1nyt_A 188 TSSG 191 (271)
T ss_dssp CSCG
T ss_pred CCCC
Confidence 9864
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0055 Score=54.53 Aligned_cols=76 Identities=20% Similarity=0.283 Sum_probs=50.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE--E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~--v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +.+... + .|..+ ..++.+.+.+.. .
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED-MTFAEQFVAQAGKLM 104 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4689999998 9999999999989999 8999999988765442 234322 2 23331 223333333221 2
Q ss_pred CCccEEEec
Q 017052 262 GGADYSFEC 270 (378)
Q Consensus 262 ~~~d~vid~ 270 (378)
+++|++|++
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 479999988
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0087 Score=53.65 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=52.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE--E--eCCCCCC-chHHHHHHHHh-
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--F--LNPNDNN-EPVQQVIKRIT- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~--v--i~~~~~~-~~~~~~i~~~~- 260 (378)
..++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+ ++.+... . .|..+ . ......+..+.
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD-PIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS-CHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC-cHHHHHHHHHHHHH
Confidence 35789999998 9999999999988999 899999998775433 2233221 2 24431 2 22333333222
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 88 ~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 88 HFGKLDILVNNAGV 101 (311)
T ss_dssp HHSSCCEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 2479999999984
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0055 Score=53.32 Aligned_cols=79 Identities=16% Similarity=0.256 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +..+... . .|..+ ..++.+.+.+.. .+
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999999999988999 899999988765433 2234332 2 23331 223333333221 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 88 ~~d~vi~~Ag~ 98 (255)
T 1fmc_A 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.007 Score=53.40 Aligned_cols=79 Identities=22% Similarity=0.345 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.+++ +++..+. +++.+... ++ |.. +..++.+.+.++. .
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA-SESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC-CHHHHHHHHHHHHHhc
Confidence 5789999988 9999999999999999 8888888 4444333 33344433 22 333 1233333343332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 106 g~id~li~nAg~ 117 (271)
T 4iin_A 106 GGLSYLVNNAGV 117 (271)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999999874
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0099 Score=53.07 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=53.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHH-----hCCCcE-E--eCCCCCCc------------
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKAK-----AFGVTE-F--LNPNDNNE------------ 250 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~~l~-----~~g~~~-v--i~~~~~~~------------ 250 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++ ++.++.+.+. +.+... . .|..+ ..
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN-VATAPVSGADGSAP 85 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-SCBCCCC----CCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCC-cccccccccccccc
Confidence 5788999988 9999999999999999 899998 8887654332 334322 2 24432 22
Q ss_pred -----hHHHHHHHHh--CCCccEEEeccCC
Q 017052 251 -----PVQQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 251 -----~~~~~i~~~~--~~~~d~vid~~g~ 273 (378)
++.+.+.+.. .+++|++|++.|.
T Consensus 86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~ 115 (291)
T 1e7w_A 86 VTLFTRCAELVAACYTHWGRCDVLVNNASS 115 (291)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444444332 2479999999873
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0062 Score=54.18 Aligned_cols=79 Identities=18% Similarity=0.315 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++.+... . .|..+ ..++.+.+.+.. .+
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999999988899 888888887765433 2234432 2 24431 233333333322 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 121 ~id~li~~Ag~ 131 (285)
T 2c07_A 121 NVDILVNNAGI 131 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.013 Score=52.71 Aligned_cols=88 Identities=24% Similarity=0.320 Sum_probs=65.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.++ +.+.++|+... ++.+.+. ..|+|+-++.
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~ell~-----~aDvV~l~~p 205 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLETLLK-----ESDVVTIHVP 205 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHHHHHH-----HCSEEEECCC
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHHHHHh-----hCCEEEEecC
Confidence 57899999999999999999999999 99999998876 55667776321 2323332 4699988876
Q ss_pred ChH----HH-HHHHHHhccCCccEEEecc
Q 017052 273 DTG----MI-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~----~~-~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. .+ ...+..++++ +.+++++.
T Consensus 206 ~~~~t~~li~~~~l~~mk~g-a~lin~ar 233 (307)
T 1wwk_A 206 LVESTYHLINEERLKLMKKT-AILINTSR 233 (307)
T ss_dssp CSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred CChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence 422 12 3567788886 88888865
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0082 Score=52.68 Aligned_cols=79 Identities=16% Similarity=0.246 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHH----HhCCCc-EE--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKA----KAFGVT-EF--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l----~~~g~~-~v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
+++++||+|+ |++|..+++.+.. .|+ +|+.++++.++.+.+ +..+.. .+ .|..+ ..++.+.+.++. .
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHhc
Confidence 5789999988 9999999988887 899 899999987765433 223322 22 24331 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 378999998873
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.011 Score=52.28 Aligned_cols=80 Identities=24% Similarity=0.278 Sum_probs=51.9
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-------------ChhhHHH----HHhCCCcEE---eCCCCCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-------------NPEKCEK----AKAFGVTEF---LNPNDNNE 250 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-------------~~~~~~~----l~~~g~~~v---i~~~~~~~ 250 (378)
-.|+++||+|+ +++|.++++.+...|+ +|+.+++ +.++.+. ++..+.... .|..+ ..
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~ 86 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD-FD 86 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HH
Confidence 35789999988 9999999999999999 8998877 4444332 233443332 23331 22
Q ss_pred hHHHHHHHHh--CCCccEEEeccCC
Q 017052 251 PVQQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 251 ~~~~~i~~~~--~~~~d~vid~~g~ 273 (378)
++.+.+.+.. .+++|+++++.|.
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3333333322 2479999998874
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0065 Score=55.26 Aligned_cols=78 Identities=21% Similarity=0.278 Sum_probs=50.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-----PEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~-----~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~ 259 (378)
.++++||+|+ |++|.++++.+...|+ +|+++.++ .++.+.+ +..+... . .|..+ ..++.+.+.+.
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~ 81 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS-QVSVDRAIDQI 81 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHH
Confidence 3678999998 9999999999999999 89887664 3333333 2234322 2 24431 33344444433
Q ss_pred h--CCCccEEEeccC
Q 017052 260 T--DGGADYSFECIG 272 (378)
Q Consensus 260 ~--~~~~d~vid~~g 272 (378)
. .+++|+++++.|
T Consensus 82 ~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAG 96 (324)
T ss_dssp HHHHSCCSEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 2 247999999988
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.012 Score=50.80 Aligned_cols=73 Identities=19% Similarity=0.120 Sum_probs=49.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.+++|||+|+ |.+|..+++.+... |. +|+++++++++.+.+ .-+...+ .|.. +. +.+.++.. ++|+||
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~--d~---~~~~~~~~-~~d~vi 74 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDIT--DA---DSINPAFQ-GIDALV 74 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTT--SH---HHHHHHHT-TCSEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCC--CH---HHHHHHHc-CCCEEE
Confidence 4688999998 99999999998888 77 899999988766543 1123222 2333 22 22333322 689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.|.
T Consensus 75 ~~a~~ 79 (253)
T 1xq6_A 75 ILTSA 79 (253)
T ss_dssp ECCCC
T ss_pred Eeccc
Confidence 98873
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0063 Score=53.59 Aligned_cols=77 Identities=19% Similarity=0.167 Sum_probs=51.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hC--CCcE-E--eCCCCCCchHHHHHHHHhCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AF--GVTE-F--LNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~--g~~~-v--i~~~~~~~~~~~~i~~~~~~ 262 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+. +. +... . .|.. +.+..+.+.+. .+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~-~g 84 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLG--TEQGCQDVIEK-YP 84 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT--SHHHHHHHHHH-CC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC--CHHHHHHHHHh-cC
Confidence 5789999988 9999999999999999 8999999887654332 22 2211 1 2333 33322233221 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 85 ~id~lv~nAg~ 95 (267)
T 3t4x_A 85 KVDILINNLGI 95 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.019 Score=49.05 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=66.2
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCc--EEeCCCCCCchHHHHHHHH
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVT--EFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~--~vi~~~~~~~~~~~~i~~~ 259 (378)
..+.+++.+||-+|+| .|..++.+|+.+ +. +|++++.+++..+.+++ .|.. .+-.. ..+..+.+..+
T Consensus 51 ~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~---~gda~~~l~~~ 125 (221)
T 3dr5_A 51 TTNGNGSTGAIAITPA-AGLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFL---LSRPLDVMSRL 125 (221)
T ss_dssp HSCCTTCCEEEEESTT-HHHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE---CSCHHHHGGGS
T ss_pred hhCCCCCCCEEEEcCC-chHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEE---EcCHHHHHHHh
Confidence 3344456699988886 488888999876 55 99999999998777754 4543 22111 12333333333
Q ss_pred hCCCccEEEeccCC---hHHHHHHHHHhccCCccEEEe
Q 017052 260 TDGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+.||+||-.... ...+..+.+.|+++ |.++.-
T Consensus 126 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d 162 (221)
T 3dr5_A 126 ANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLA 162 (221)
T ss_dssp CTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEET
T ss_pred cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEe
Confidence 23589998843322 24678889999997 988774
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0073 Score=52.54 Aligned_cols=77 Identities=16% Similarity=0.290 Sum_probs=52.1
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcE-E--eCCCCCCchHHHHHHHHhC--CCccEE
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-F--LNPNDNNEPVQQVIKRITD--GGADYS 267 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~-v--i~~~~~~~~~~~~i~~~~~--~~~d~v 267 (378)
+++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. +++... . .|.. +..++.+.+.+... +++|++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVR-NRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTT-CHHHHHHHHHTSCTTTCCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCC-CHHHHHHHHHHHHHhCCCCCEE
Confidence 46889988 9999999999999999 8999999988765543 344322 2 2433 12334444444322 378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|++.|.
T Consensus 79 vnnAg~ 84 (248)
T 3asu_A 79 VNNAGL 84 (248)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 998873
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0067 Score=53.03 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=51.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++ +.++.+.+ ++.+... ++ |..+ ..++.+.+.+.. .
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4789999988 9999999999988999 8999888 76654432 2334332 22 3331 223333333322 2
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 84 g~id~li~~Ag 94 (261)
T 1gee_A 84 GKLDVMINNAG 94 (261)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 37899999887
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.0095 Score=50.53 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=61.6
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|||+|+ |.+|..+++.+...|. +|+++++++++.+.+ .--.++..+ -.+..+.+.+... ++|+||.+.|..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---~~~~~~~~D--~~d~~~~~~~~~~-~~d~vi~~ag~~ 74 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---NNVKAVHFD--VDWTPEEMAKQLH-GMDAIINVSGSG 74 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---TTEEEEECC--TTSCHHHHHTTTT-TCSEEEECCCCT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---CCceEEEec--ccCCHHHHHHHHc-CCCEEEECCcCC
Confidence 6999998 9999999999999998 999999998765432 222233222 1121234444333 699999999853
Q ss_pred H---------HHHHHHHHhccC-CccEEEeccCCC
Q 017052 275 G---------MITTALQSCCDG-WGLAVTLGVPKL 299 (378)
Q Consensus 275 ~---------~~~~~~~~l~~~-~G~~v~~g~~~~ 299 (378)
. ....+++.+... .++++.++....
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 109 (219)
T 3dqp_A 75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS 109 (219)
T ss_dssp TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence 1 123344444332 258888876543
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=96.39 E-value=0.011 Score=51.59 Aligned_cols=102 Identities=13% Similarity=0.093 Sum_probs=71.4
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc----EEeCCCCCCchHHHHHHHHh
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT----EFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~----~vi~~~~~~~~~~~~i~~~~ 260 (378)
+.....++++.+||-+|+| .|..+..+++..+. ++++++.+++..+.+++.... .++..+ ..++ ...
T Consensus 47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d--~~~~-----~~~ 117 (266)
T 3ujc_A 47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEAND--ILTK-----EFP 117 (266)
T ss_dssp HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECC--TTTC-----CCC
T ss_pred HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECc--cccC-----CCC
Confidence 3456678899999999987 68888888887787 999999999999999876432 122221 1110 112
Q ss_pred CCCccEEEeccC--------ChHHHHHHHHHhccCCccEEEecc
Q 017052 261 DGGADYSFECIG--------DTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 261 ~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+.+|+|+.... -...+..+.+.|+++ |+++....
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~ 160 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY 160 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence 237999986532 123467888899997 99887753
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.026 Score=50.80 Aligned_cols=75 Identities=16% Similarity=0.181 Sum_probs=51.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHHH-h----CCCc-EEeCCCCCCchH-HHHHHHHhC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---PEKCEKAK-A----FGVT-EFLNPNDNNEPV-QQVIKRITD 261 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~---~~~~~~l~-~----~g~~-~vi~~~~~~~~~-~~~i~~~~~ 261 (378)
-.++++||+|+|++|.+++..+...|+++|+++.|+ .++.+.+. + .+.. ..+.+. +.++ .+.+.
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~--~l~~~~~~l~---- 219 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLA--DQHAFTEALA---- 219 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETT--CHHHHHHHHH----
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechH--hhhhhHhhcc----
Confidence 368899999999999999999999999889999999 66555432 2 2322 233332 2111 22222
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
.+|+||+|++.
T Consensus 220 -~~DiIINaTp~ 230 (312)
T 3t4e_A 220 -SADILTNGTKV 230 (312)
T ss_dssp -HCSEEEECSST
T ss_pred -CceEEEECCcC
Confidence 47999999864
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.01 Score=51.62 Aligned_cols=80 Identities=19% Similarity=0.263 Sum_probs=51.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhC--CCcE-E--eCCCCCC-chHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAF--GVTE-F--LNPNDNN-EPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~~~~~l~~~--g~~~-v--i~~~~~~-~~~~~~i~~~~~-- 261 (378)
.++++||+|+ |++|.++++.+...|++.|+.+++++ +..+.+++. +... . .|..+ . .++.+.+.+...
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC-ChHHHHHHHHHHHHhc
Confidence 4789999988 99999999999999994388887765 333334332 2221 2 24431 2 344444443322
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 83 g~id~lv~~Ag~ 94 (254)
T 1sby_A 83 KTVDILINGAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 379999999873
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=96.37 E-value=0.008 Score=57.26 Aligned_cols=93 Identities=24% Similarity=0.400 Sum_probs=69.4
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
--.|++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|.. +. ++.+.+ ...|+|+-+
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~~-------~l~ell-----~~aDiVi~~ 319 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-------TLDEIV-----DKGDFFITC 319 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-------CHHHHT-----TTCSEEEEC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-ec-------CHHHHH-----hcCCEEEEC
Confidence 3579999999999999999999999999 999999998876555556652 21 222222 257999988
Q ss_pred cCChHHH-HHHHHHhccCCccEEEeccCC
Q 017052 271 IGDTGMI-TTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 271 ~g~~~~~-~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.+....+ ...+..|+++ ..++++|...
T Consensus 320 ~~t~~lI~~~~l~~MK~g-ailiNvgrg~ 347 (479)
T 1v8b_A 320 TGNVDVIKLEHLLKMKNN-AVVGNIGHFD 347 (479)
T ss_dssp CSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred CChhhhcCHHHHhhcCCC-cEEEEeCCCC
Confidence 7654433 3677888986 8899987654
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0085 Score=52.60 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE--E--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTVVIFGL-G-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~--v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.++++||+|+ | ++|.++++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ..++.+.+.+..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS-TEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC-HHHHHHHHHHHHHH
Confidence 5789999988 6 799999999989999 8999999987755432 223212 2 24331 233333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 2378999999883
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0037 Score=54.24 Aligned_cols=75 Identities=8% Similarity=0.011 Sum_probs=50.5
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-c--CChhhHHHH-HhC-CCcEEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-D--TNPEKCEKA-KAF-GVTEFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~--~~~~~~~~l-~~~-g~~~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
++++||+|+ |++|.++++.+...|+ +|+.+ + +++++.+.+ +++ +. .+.+.+ .-..+.+.+.+. .+++|++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~-~v~~~~~~~~~~-~g~iD~l 76 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQ-KPERLVDATLQH-GEAIDTI 76 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCC-CGGGHHHHHGGG-SSCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHH-HHHHHHHHHHHH-cCCCCEE
Confidence 468999988 9999999999999999 89998 6 888776544 334 32 233322 122333333332 2479999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
|++.|
T Consensus 77 v~~Ag 81 (244)
T 1zmo_A 77 VSNDY 81 (244)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99887
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.009 Score=52.68 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=51.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++ +.++.+.+ ++.+... . .|..+ ..+..+.+.+.. .
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ-ESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 7877766 55544332 3344433 2 24431 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 105 g~id~lv~nAg~ 116 (269)
T 4dmm_A 105 GRLDVLVNNAGI 116 (269)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0058 Score=53.22 Aligned_cols=79 Identities=27% Similarity=0.389 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~-~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
.++++||+|+ |.+|..+++.+...|+ +|++++++ .++.+.+ +..+... . .|..+ ..++.+.+.+...
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT-SEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4688999988 9999999999988999 89999887 5554432 2234322 2 23331 2233333333222
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 84 g~id~vi~~Ag~ 95 (258)
T 3afn_B 84 GGIDVLINNAGG 95 (258)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999998874
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0044 Score=53.38 Aligned_cols=101 Identities=23% Similarity=0.261 Sum_probs=66.9
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhC--
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~-- 261 (378)
...++++||-+|+| .|..++.+|+.+ +. ++++++.+++..+.+++ .|....+.+. ..+..+.+..+..
T Consensus 69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~--~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDG-QIIACDQDPNATAIAKKYWQKAGVAEKISLR--LGPALATLEQLTQGK 144 (232)
T ss_dssp HHHTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEE--ESCHHHHHHHHHTSS
T ss_pred HhcCCCEEEEecCC-CCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhcC
Confidence 34567899999987 688888999876 45 99999999998877765 3443211111 1233333444332
Q ss_pred --CCccEEE-eccCC--hHHHHHHHHHhccCCccEEEec
Q 017052 262 --GGADYSF-ECIGD--TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 --~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.||+|| |.... ...+..+.+.|+++ |.++.-.
T Consensus 145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~ 182 (232)
T 3cbg_A 145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDN 182 (232)
T ss_dssp SCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEEC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeC
Confidence 5799988 43321 24577888999997 9887753
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0099 Score=52.99 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCC--CeEEEEcCChhhHHHHHh-C-----CCcE-E--eCCCCCCchHHHHHHHHh
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGA--SRIIGVDTNPEKCEKAKA-F-----GVTE-F--LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~--~~vi~v~~~~~~~~~l~~-~-----g~~~-v--i~~~~~~~~~~~~i~~~~ 260 (378)
.|+++||+|+ |++|.++++.+...|+ .+|+.++++.++.+.+.+ + +... . .|.. +..++.+.+.+..
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-QAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-CGGGHHHHHHTSC
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-CHHHHHHHHHHHH
Confidence 5789999988 9999999877665554 278888899887665432 1 3322 2 2443 2345555555443
Q ss_pred C--CCccEEEeccC
Q 017052 261 D--GGADYSFECIG 272 (378)
Q Consensus 261 ~--~~~d~vid~~g 272 (378)
. +++|++|++.|
T Consensus 111 ~~~g~iD~lVnnAG 124 (287)
T 3rku_A 111 QEFKDIDILVNNAG 124 (287)
T ss_dssp GGGCSCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 2 37999999887
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.014 Score=52.62 Aligned_cols=91 Identities=15% Similarity=0.192 Sum_probs=60.8
Q ss_pred CeEEEEccChHHHHHHHHHHH--cCCCeEEEEcCChhh--HHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEe
Q 017052 195 STVVIFGLGTVGLSVAQGAKA--RGASRIIGVDTNPEK--CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~--~g~~~vi~v~~~~~~--~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid 269 (378)
-+|.|+|+|.+|..++..+.. -+.+.+.++++++++ .+.++++|..... .++.+ +.+.+.+ ++|+||+
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~~e~-ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGVEG-LIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHHHH-HHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CCHHH-HHhccCCCCCcEEEE
Confidence 478999999999999888843 466334455666555 5667788875321 13333 3332223 7899999
Q ss_pred ccCChHHHHHHHHHhcc--CCccEEE
Q 017052 270 CIGDTGMITTALQSCCD--GWGLAVT 293 (378)
Q Consensus 270 ~~g~~~~~~~~~~~l~~--~~G~~v~ 293 (378)
+++.....+.+..++.. + .++++
T Consensus 78 atp~~~h~~~a~~al~a~~G-k~Vi~ 102 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQAKPG-IRLID 102 (312)
T ss_dssp CSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred CCChHHHHHHHHHHHHhCCC-CEEEE
Confidence 99976667777778876 6 66666
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.012 Score=53.47 Aligned_cols=79 Identities=11% Similarity=0.094 Sum_probs=53.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHH-----hCCCcE-E--eCCCCCCc------------
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKAK-----AFGVTE-F--LNPNDNNE------------ 250 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~~l~-----~~g~~~-v--i~~~~~~~------------ 250 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++ ++.++.+.+. ..+... . .|..+ ..
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 122 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN-VATAPVSGADGSAP 122 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-SCBCC-------CC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCC-chhccccccccccc
Confidence 5789999988 9999999999999999 899998 8877655432 234322 2 24432 22
Q ss_pred -----hHHHHHHHHh--CCCccEEEeccCC
Q 017052 251 -----PVQQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 251 -----~~~~~i~~~~--~~~~d~vid~~g~ 273 (378)
++.+.+.+.. .+++|++|++.|.
T Consensus 123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~ 152 (328)
T 2qhx_A 123 VTLFTRCAELVAACYTHWGRCDVLVNNASS 152 (328)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cccHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444444332 2379999999873
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.042 Score=49.00 Aligned_cols=86 Identities=16% Similarity=0.299 Sum_probs=61.3
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChH
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 275 (378)
+|.|+|+|.+|...+..+...|. +|+++++++++.+.+++.|... . .+..+.+. ..|+||.|+..+.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~D~vi~~v~~~~ 73 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIAE-----QCDVIITMLPNSP 73 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHHH-----HCSEEEECCSSHH
T ss_pred eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----CCCEEEEECCCHH
Confidence 79999999999999998888898 8999999999988887776532 1 12323332 4799999998655
Q ss_pred HHHHHH-------HHhccCCccEEEec
Q 017052 276 MITTAL-------QSCCDGWGLAVTLG 295 (378)
Q Consensus 276 ~~~~~~-------~~l~~~~G~~v~~g 295 (378)
.+...+ ..+.++ ..++.++
T Consensus 74 ~~~~~~~~~~~l~~~l~~~-~~vv~~s 99 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAKPG-TVLIDMS 99 (299)
T ss_dssp HHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred HHHHHHhCcchHhhcCCCC-CEEEECC
Confidence 444444 455654 5555554
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.021 Score=50.64 Aligned_cols=99 Identities=12% Similarity=0.193 Sum_probs=69.3
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCc---EEeCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVT---EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~---~vi~~~~~~~~~~~~i~ 257 (378)
+.+..++.++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++. +.. .++..+ + .
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d-----~----~ 124 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG-----W----E 124 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC-----G----G
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC-----h----h
Confidence 34566788999999999875 7788888987898 999999999988877653 321 122211 1 1
Q ss_pred HHhCCCccEEEec-----cC---ChHHHHHHHHHhccCCccEEEecc
Q 017052 258 RITDGGADYSFEC-----IG---DTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 258 ~~~~~~~d~vid~-----~g---~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
++. +.+|+|+.. ++ -...+..+.+.|+++ |+++....
T Consensus 125 ~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 169 (287)
T 1kpg_A 125 QFD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI 169 (287)
T ss_dssp GCC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred hCC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence 111 579998854 22 135678888999997 99887643
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0037 Score=52.54 Aligned_cols=132 Identities=15% Similarity=0.148 Sum_probs=74.6
Q ss_pred ceeeEEE-EeCCceeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc
Q 017052 147 SFSEYTV-VHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 147 ~~a~~~~-v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~ 225 (378)
.|.+|.. .+....+.++..+++..... +.. ......+. ..++++++||-+|+|. |..+..+++. +..++++++
T Consensus 17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~-~~~~~~l~--~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~~vD 90 (205)
T 3grz_A 17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTT-QLAMLGIE--RAMVKPLTVADVGTGS-GILAIAAHKL-GAKSVLATD 90 (205)
T ss_dssp TTCCCCCSSTTCEEEEESCC-----CCH-HHH-HHHHHHHH--HHCSSCCEEEEETCTT-SHHHHHHHHT-TCSEEEEEE
T ss_pred cccccccCCCCceeEEecCCcccCCCCC-ccH-HHHHHHHH--HhccCCCEEEEECCCC-CHHHHHHHHC-CCCEEEEEE
Confidence 4556655 55667777887776555321 100 01111111 1267889999999875 6777777764 555999999
Q ss_pred CChhhHHHHHh----CCCc--EEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh---HHHHHHHHHhccCCccEEEe
Q 017052 226 TNPEKCEKAKA----FGVT--EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 226 ~~~~~~~~l~~----~g~~--~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+++..+.+++ .+.. .++..+ ..+ ...+.+|+|+-...-. ..+..+.+.|+++ |+++..
T Consensus 91 ~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~ 158 (205)
T 3grz_A 91 ISDESMTAAEENAALNGIYDIALQKTS--LLA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFS 158 (205)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEEESS--TTT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEecc--ccc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEE
Confidence 99998877765 3433 222221 111 1234899998654321 2244455678886 888775
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0073 Score=52.58 Aligned_cols=75 Identities=21% Similarity=0.320 Sum_probs=50.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.+. ++.+... ..|..+ ..++.+.+.+.. .+++|++|
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~id~lv 79 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD-AAQVAQVCQRLLAETERLDALV 79 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC-HHHHHHHHHHHHHHCSCCCEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999998 9999999999999999 89999887653 2234222 224431 233333343332 24799999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 80 ~~Ag~ 84 (250)
T 2fwm_X 80 NAAGI 84 (250)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99873
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.006 Score=53.85 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=50.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccE
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~ 266 (378)
...|++|||+|+ |++|.++++.+...|+ +|+.++++.++.. . .... ..|..+ ..+..+.+.+.. .+++|+
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDVTN-EEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCTTC-HHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 457899999988 9999999999999999 8999988765541 1 1111 234431 223333333332 247999
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+|++.|.
T Consensus 85 lv~nAg~ 91 (269)
T 3vtz_A 85 LVNNAGI 91 (269)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999874
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0074 Score=53.35 Aligned_cols=77 Identities=14% Similarity=0.162 Sum_probs=51.9
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCC---cEE--eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGV---TEF--LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~---~~v--i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
+++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+. ++.. -.. .|..+ ..++.+.+.+... +++|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD-RAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHTCCGGGSSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhCCCC
Confidence 78999988 9999999999999999 8999999988765543 2321 122 24331 2333334443322 3789
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
++|++.|.
T Consensus 100 ~lvnnAG~ 107 (272)
T 2nwq_A 100 GLINNAGL 107 (272)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998873
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.017 Score=51.04 Aligned_cols=71 Identities=10% Similarity=0.093 Sum_probs=52.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC--cEEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~--~~vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
-.+++++|+|+|++|.+++..+...|+.+|+++.++.++.+.+ ++++. ...+.++ ++ ....+|+||
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~----~l-------~~~~~DivI 186 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE----AL-------EGQSFDIVV 186 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG----GG-------TTCCCSEEE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH----Hh-------cccCCCEEE
Confidence 3689999999999999999999999977899999999886654 44543 2233332 11 113789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++++.
T Consensus 187 naTp~ 191 (272)
T 3pwz_A 187 NATSA 191 (272)
T ss_dssp ECSSG
T ss_pred ECCCC
Confidence 99875
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.015 Score=52.67 Aligned_cols=78 Identities=22% Similarity=0.294 Sum_probs=51.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhhHH----HHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT---------NPEKCE----KAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~---------~~~~~~----~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
.|+++||+|+ |++|..+++.+...|+ +|+++++ +.++.+ .++..+...+.+..+ ..+..+.+.+
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~-~~~~~~~~~~ 85 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT 85 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC-HHHHHHHHHH
Confidence 5789999998 9999999999999999 8888643 444433 233445545556552 2333333333
Q ss_pred Hh--CCCccEEEeccC
Q 017052 259 IT--DGGADYSFECIG 272 (378)
Q Consensus 259 ~~--~~~~d~vid~~g 272 (378)
+. .+++|++|++.|
T Consensus 86 ~~~~~g~iD~lVnnAG 101 (319)
T 1gz6_A 86 ALDTFGRIDVVVNNAG 101 (319)
T ss_dssp HHHHTSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 21 247999999887
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0029 Score=54.97 Aligned_cols=77 Identities=13% Similarity=0.093 Sum_probs=48.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHH--HHHHHHh--CCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ--QVIKRIT--DGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~--~~i~~~~--~~~~d~v 267 (378)
.++++||+|+ |++|.++++.+.. |. .|+++++++++.+.+.+......+..+ -.+.. +.+.+.. .+++|++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D--~~~~~~~~~~~~~~~~~~~id~l 79 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIESD--IVKEVLEEGGVDKLKNLDHVDTL 79 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEECC--HHHHHHTSSSCGGGTTCSCCSEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceecc--cchHHHHHHHHHHHHhcCCCCEE
Confidence 4789999988 9999999887765 87 899999999888877764333333221 01110 0111111 1378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|++.|.
T Consensus 80 v~~Ag~ 85 (245)
T 3e9n_A 80 VHAAAV 85 (245)
T ss_dssp EECC--
T ss_pred EECCCc
Confidence 999874
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.012 Score=52.44 Aligned_cols=36 Identities=25% Similarity=0.363 Sum_probs=32.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+.+|+|+|+|++|..+++.+..+|..+++.++.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 457999999999999999999999998999998765
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.035 Score=52.05 Aligned_cols=97 Identities=15% Similarity=0.142 Sum_probs=62.7
Q ss_pred CeEEEEccChHHHHHHHHHHHcCC--CeEEEEcCChhhHHHHHh-CC------CcE-EeCCCCCCchHHHHHHHHhCCCc
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGA--SRIIGVDTNPEKCEKAKA-FG------VTE-FLNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~--~~vi~v~~~~~~~~~l~~-~g------~~~-vi~~~~~~~~~~~~i~~~~~~~~ 264 (378)
.+|+|+|+|.+|..+++.+...|. ..|++++++.++.+.+.+ ++ ... ..+.. +..++.+.+.+. ++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~-d~~~l~~~l~~~---~~ 77 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDAD-SIEELVALINEV---KP 77 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTT-CHHHHHHHHHHH---CC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCC-CHHHHHHHHHhh---CC
Confidence 479999999999999998887773 388999999988765433 32 222 22332 122333333332 68
Q ss_pred cEEEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 265 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
|+|+++++.......+..++..+ -.++++..
T Consensus 78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a~ 108 (405)
T 4ina_A 78 QIVLNIALPYQDLTIMEACLRTG-VPYLDTAN 108 (405)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHT-CCEEESSC
T ss_pred CEEEECCCcccChHHHHHHHHhC-CCEEEecC
Confidence 99999998644444555666664 66666533
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.05 Score=48.73 Aligned_cols=73 Identities=23% Similarity=0.349 Sum_probs=54.1
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
.+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|... .-+..+ . + ...|+||-|+..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e----~---~-----~~aDvvi~~vp~ 74 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASARE----F---A-----GVVDALVILVVN 74 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTT----T---T-----TTCSEEEECCSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHH----H---H-----hcCCEEEEECCC
Confidence 579999999999999999999998 9999999999999998888765 222221 0 0 145777777766
Q ss_pred hHHHHHH
Q 017052 274 TGMITTA 280 (378)
Q Consensus 274 ~~~~~~~ 280 (378)
+......
T Consensus 75 ~~~~~~v 81 (303)
T 3g0o_A 75 AAQVRQV 81 (303)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0079 Score=52.60 Aligned_cols=78 Identities=12% Similarity=0.180 Sum_probs=51.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHH---cCCCeEEEEcCChhhHHHHH-hC-----CCcE-E--eCCCCCCchHHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKA---RGASRIIGVDTNPEKCEKAK-AF-----GVTE-F--LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~---~g~~~vi~v~~~~~~~~~l~-~~-----g~~~-v--i~~~~~~~~~~~~i~~~ 259 (378)
.++++||+|+ |++|.++++.+.. .|+ +|+.+++++++.+.+. ++ +... . .|..+ ..++.+.+.+.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~ 82 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT-EAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS-HHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC-HHHHHHHHHHH
Confidence 4678999988 9999999988877 899 8999999987765442 22 3322 2 24431 23344444444
Q ss_pred hC----CCcc--EEEeccC
Q 017052 260 TD----GGAD--YSFECIG 272 (378)
Q Consensus 260 ~~----~~~d--~vid~~g 272 (378)
.. +++| +++++.|
T Consensus 83 ~~~~~~g~~d~~~lvnnAg 101 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAA 101 (259)
T ss_dssp HHSCCCTTCCEEEEEECCC
T ss_pred HhccccccCCccEEEECCc
Confidence 22 3678 9998876
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0082 Score=52.45 Aligned_cols=77 Identities=19% Similarity=0.355 Sum_probs=49.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-E--eCCCCCCchHHHHHHHHh-CCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT-DGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~-~~~~d~v 267 (378)
.++++||+|+ +++|.++++.+...|+ +|+.++++.+ +.++.++... . .|..+ ..+..+.+.... .+++|++
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~g~id~l 83 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGE--DVVADLGDRARFAAADVTD-EAAVASALDLAETMGTLRIV 83 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTC-HHHHHHHHHHHHHHSCEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchH--HHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhCCCCEE
Confidence 4789999988 9999999999989999 8888887544 3344555433 2 24431 222222222211 2489999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
+++.|.
T Consensus 84 v~nAg~ 89 (257)
T 3tl3_A 84 VNCAGT 89 (257)
T ss_dssp EECGGG
T ss_pred EECCCC
Confidence 999873
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0079 Score=53.27 Aligned_cols=96 Identities=18% Similarity=0.174 Sum_probs=61.6
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
++|||+|+ |.+|..+++.+... |. +|+++++++++.+.+...+...+. |.. +. +.+.+... ++|+||.+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~--d~---~~l~~~~~-~~d~vi~~ 73 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYN--QP---ESLQKAFA-GVSKLLFI 73 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTT--CH---HHHHHHTT-TCSEEEEC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccC--CH---HHHHHHHh-cCCEEEEc
Confidence 36899998 99999999888877 88 899999988776666555554332 333 22 23333322 68999999
Q ss_pred cCCh-------HHHHHHHHHhccC-CccEEEeccC
Q 017052 271 IGDT-------GMITTALQSCCDG-WGLAVTLGVP 297 (378)
Q Consensus 271 ~g~~-------~~~~~~~~~l~~~-~G~~v~~g~~ 297 (378)
.+.. .....+++.+... .++++.++..
T Consensus 74 a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 74 SGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred CCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 8741 1223344444433 2478877654
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0097 Score=52.30 Aligned_cols=74 Identities=15% Similarity=0.218 Sum_probs=49.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++ .-.... ..|..+ ..++.+.+.+.. .+++|++|
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~iD~lv 79 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN-PDQVKASIDHIFKEYGSISVLV 79 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999998 9999999999999999 89999887665 111211 224431 223333333322 23799999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 80 ~~Ag~ 84 (264)
T 2dtx_A 80 NNAGI 84 (264)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99873
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.01 Score=51.26 Aligned_cols=77 Identities=22% Similarity=0.245 Sum_probs=50.4
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhCCCcE-E-e--CCCCCCchHHHHHHHHh--C
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTE-F-L--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~l----~~~g~~~-v-i--~~~~~~~~~~~~i~~~~--~ 261 (378)
++++||+|+ |++|..+++.+...|+ +|+++ ++++++.+.+ ++.+... . + |..+ ..++.+.+.+.. .
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE-AEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHHHHhc
Confidence 468999988 9999999999998999 88887 8887765543 2234332 2 2 3331 223333333322 2
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 79 ~~~d~li~~Ag 89 (245)
T 2ph3_A 79 GGLDTLVNNAG 89 (245)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999999887
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=96.24 E-value=0.009 Score=53.18 Aligned_cols=80 Identities=15% Similarity=0.175 Sum_probs=51.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH-H----hCCCcE-E--eCCCCC---CchHHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKA-K----AFGVTE-F--LNPNDN---NEPVQQVIKRI 259 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l-~----~~g~~~-v--i~~~~~---~~~~~~~i~~~ 259 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++. ++.+.+ + ..+... . .|..+. ..++.+.+.+.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 4788999988 9999999999988999 899988886 554332 2 234322 2 243310 12222233322
Q ss_pred h--CCCccEEEeccCC
Q 017052 260 T--DGGADYSFECIGD 273 (378)
Q Consensus 260 ~--~~~~d~vid~~g~ 273 (378)
. .+++|++|++.|.
T Consensus 101 ~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 1 2479999998873
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=96.24 E-value=0.026 Score=49.24 Aligned_cols=94 Identities=24% Similarity=0.407 Sum_probs=64.0
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEeCCCCCCchHHHHHHHHhCCCcc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
++++++||-+|+|. |..++.+++ .|. +|++++.++...+.+++ .+.. .++. .++.+. +..+.+|
T Consensus 118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~-----~d~~~~---~~~~~fD 186 (254)
T 2nxc_A 118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE-----GSLEAA---LPFGPFD 186 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE-----SCHHHH---GGGCCEE
T ss_pred cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE-----CChhhc---CcCCCCC
Confidence 67899999999865 777777666 577 99999999988877765 3432 2221 122221 2234899
Q ss_pred EEEeccCC---hHHHHHHHHHhccCCccEEEecc
Q 017052 266 YSFECIGD---TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 266 ~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+|+...-. ...+..+.+.++++ |+++..+.
T Consensus 187 ~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~ 219 (254)
T 2nxc_A 187 LLVANLYAELHAALAPRYREALVPG-GRALLTGI 219 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEee
Confidence 99865421 24566778889997 99988653
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0073 Score=51.61 Aligned_cols=100 Identities=16% Similarity=0.195 Sum_probs=67.3
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHHHh
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~~~ 260 (378)
....++++||-+|+| .|..++.+|+..+ ..++++++.+++..+.+++ .|.. .++. .+..+.+..+.
T Consensus 65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~-----~d~~~~~~~~~ 138 (229)
T 2avd_A 65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL-----KPALETLDELL 138 (229)
T ss_dssp HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE-----SCHHHHHHHHH
T ss_pred HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE-----cCHHHHHHHHH
Confidence 445678899999987 6888889998763 3399999999988877765 3432 1222 12333333332
Q ss_pred C----CCccEEEeccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 261 D----GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~----~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
. +.+|+|+-.... ...+..+.+.++++ |.++...
T Consensus 139 ~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~ 179 (229)
T 2avd_A 139 AAGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR 179 (229)
T ss_dssp HTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred hcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEC
Confidence 2 479998743322 24678888999997 9988754
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.057 Score=48.59 Aligned_cols=75 Identities=20% Similarity=0.339 Sum_probs=55.0
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
-.+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-|+..
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~~-----~aDvvi~~vp~ 87 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVIK-----KCKYTIAMLSD 87 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHH-----HCSEEEECCSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHHH-----hCCEEEEEcCC
Confidence 3579999999999999999999998 99999999999998888776321 12233332 35788877766
Q ss_pred hHHHHHHH
Q 017052 274 TGMITTAL 281 (378)
Q Consensus 274 ~~~~~~~~ 281 (378)
+..+...+
T Consensus 88 ~~~~~~v~ 95 (310)
T 3doj_A 88 PCAALSVV 95 (310)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 54444443
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.019 Score=51.84 Aligned_cols=89 Identities=20% Similarity=0.275 Sum_probs=65.6
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|++|.|+|.|.+|..+++.++..|. +|++.+++.++. .++++|+.. . ++.+.+. ..|+|+.++
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~-~-------~l~ell~-----~aDvVvl~~ 204 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA-V-------SLEELLK-----NSDVISLHV 204 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE-C-------CHHHHHH-----HCSEEEECC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee-c-------CHHHHHh-----hCCEEEEec
Confidence 468899999999999999999999999 999999887765 456777642 1 2323332 469999887
Q ss_pred CChH----HH-HHHHHHhccCCccEEEecc
Q 017052 272 GDTG----MI-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 272 g~~~----~~-~~~~~~l~~~~G~~v~~g~ 296 (378)
..+. .+ ...+..++++ +.+++++.
T Consensus 205 P~~~~t~~li~~~~l~~mk~g-a~lIn~ar 233 (313)
T 2ekl_A 205 TVSKDAKPIIDYPQFELMKDN-VIIVNTSR 233 (313)
T ss_dssp CCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred cCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence 6422 12 4567788886 88888865
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.026 Score=53.91 Aligned_cols=94 Identities=17% Similarity=0.133 Sum_probs=59.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHh-CCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA-FGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~-~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.+++|+|+|+|.+|.+++..+... +. +|++++++.++.+.+.+ .+... .++..+ ..++.+.+. ++|+||+
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d-~~~l~~~l~-----~~DvVIn 94 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD-DSALDKVLA-----DNDVVIS 94 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC-HHHHHHHHH-----TSSEEEE
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC-HHHHHHHHc-----CCCEEEE
Confidence 457899999999999999888877 66 89999999888766644 34322 233321 112222222 6899999
Q ss_pred ccCChHHHHHHHHHhccCCccEEEe
Q 017052 270 CIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 270 ~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
|++..........++..+ -.+++.
T Consensus 95 ~tp~~~~~~v~~a~l~~g-~~vvd~ 118 (467)
T 2axq_A 95 LIPYTFHPNVVKSAIRTK-TDVVTS 118 (467)
T ss_dssp CSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred CCchhhhHHHHHHHHhcC-CEEEEe
Confidence 998642222334455553 445543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.01 Score=49.56 Aligned_cols=62 Identities=16% Similarity=0.387 Sum_probs=44.1
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
++||+|+ |.+|..+++.+. .|+ +|++++++.+ ....|..+ ..++.+.+..+ +++|++|.+.|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~-~~~~~~~~~~~--~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN-IDSIKKMYEQV--GKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC-HHHHHHHHHHH--CCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC-HHHHHHHHHHh--CCCCEEEECCC
Confidence 7999998 999999999888 898 8999988754 12334431 22333334333 47899999887
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.016 Score=48.13 Aligned_cols=100 Identities=17% Similarity=0.242 Sum_probs=67.2
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCC-c--EEeCCCCCCchHHHHHHHH
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGV-T--EFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~-~--~vi~~~~~~~~~~~~i~~~ 259 (378)
...++++++||-+|+|. |..++.+++..+ ..++++++.+++..+.+++ .|. + .++..+ ..++ ...
T Consensus 17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~----~~~ 89 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDG--HQNM----DKY 89 (197)
T ss_dssp HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSC--GGGG----GGT
T ss_pred HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HHHH----hhh
Confidence 34578899999999865 788888888864 2289999999988877755 343 2 233222 1111 112
Q ss_pred hCCCccEEEeccCC---------------hHHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSFECIGD---------------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.+|+|+-..+- ...+..+.+.|+++ |+++...
T Consensus 90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~ 139 (197)
T 3eey_A 90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVI 139 (197)
T ss_dssp CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEE
Confidence 23479998854422 24688889999997 9988764
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.008 Score=51.97 Aligned_cols=74 Identities=18% Similarity=0.280 Sum_probs=48.1
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe--CCCCCCchHHHHHH---HHhC-CCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL--NPNDNNEPVQQVIK---RITD-GGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi--~~~~~~~~~~~~i~---~~~~-~~~ 264 (378)
..++++||+|+ |++|.++++.+...|+ +|+++++++++.+ +....+ |.. +..++.+.+. +..+ +++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~-~~~~v~~~~~~~~~~~~~g~i 77 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDS-FTEQADQVTAEVGKLLGDQKV 77 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSC-HHHHHHHHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCC-CHHHHHHHHHHHHHHhCCCCC
Confidence 45789999998 9999999999999999 8999988876532 111222 222 1112222222 2222 579
Q ss_pred cEEEeccC
Q 017052 265 DYSFECIG 272 (378)
Q Consensus 265 d~vid~~g 272 (378)
|++|++.|
T Consensus 78 D~lv~~Ag 85 (241)
T 1dhr_A 78 DAILCVAG 85 (241)
T ss_dssp EEEEECCC
T ss_pred CEEEEccc
Confidence 99999987
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0061 Score=52.50 Aligned_cols=74 Identities=19% Similarity=0.329 Sum_probs=47.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC-chHHHHHH---HHhC-CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN-EPVQQVIK---RITD-GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~-~~~~~~i~---~~~~-~~~d~ 266 (378)
.++++||+|+ |++|.++++.+...|+ +|+++++++++.+ +....+..+-.+ .++.+.+. +..+ +++|+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~ 75 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG 75 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence 3678999998 9999999999999999 8999988876532 111222221001 12222222 2222 57999
Q ss_pred EEeccC
Q 017052 267 SFECIG 272 (378)
Q Consensus 267 vid~~g 272 (378)
+|++.|
T Consensus 76 lv~~Ag 81 (236)
T 1ooe_A 76 VFCVAG 81 (236)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 999988
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.029 Score=50.81 Aligned_cols=89 Identities=17% Similarity=0.304 Sum_probs=61.7
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|....- +..+.+. ..|+||-|+..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~~-------~~~e~~~-----~aDvVi~~vp~ 97 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIHE-------QARAAAR-----DADIVVSMLEN 97 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEES-------SHHHHHT-----TCSEEEECCSS
T ss_pred CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEeeC-------CHHHHHh-----cCCEEEEECCC
Confidence 4689999999999999999999998 899999999999988887753321 2222221 46888888876
Q ss_pred hHHHHHHH------HHhccCCccEEEecc
Q 017052 274 TGMITTAL------QSCCDGWGLAVTLGV 296 (378)
Q Consensus 274 ~~~~~~~~------~~l~~~~G~~v~~g~ 296 (378)
+..+...+ ..+.++ ..++..+.
T Consensus 98 ~~~~~~v~~~~~~~~~l~~~-~~vi~~st 125 (320)
T 4dll_A 98 GAVVQDVLFAQGVAAAMKPG-SLFLDMAS 125 (320)
T ss_dssp HHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred HHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence 54444433 245553 45555543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.009 Score=51.67 Aligned_cols=79 Identities=23% Similarity=0.272 Sum_probs=49.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~----l~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|..+++.+...|+ +|+++ .+++++.+. +++.+... .+ |..+ ..++.+.+.+.. .
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN-PEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHhc
Confidence 4689999988 9999999999999999 88888 566554432 23334332 22 3331 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 82 ~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 82 GRIDILVNNAGI 93 (247)
T ss_dssp SCCCEEEECC--
T ss_pred CCCCEEEECCCC
Confidence 379999999874
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0091 Score=52.51 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhCCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~----l~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.+++|||+|+ |++|..+++.+...|+ +|+++++ +.++.+. +++.+... . .|..+ ..++.+.+.+.. .
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK-PSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 8888888 6665443 23345432 2 24331 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 378999998873
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.012 Score=51.72 Aligned_cols=81 Identities=16% Similarity=0.275 Sum_probs=53.4
Q ss_pred CCCCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEEe--CCCCCCchHHHHHHHHh-
Q 017052 191 ISKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFL--NPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 191 ~~~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~vi--~~~~~~~~~~~~i~~~~- 260 (378)
..++++|||+|+ +++|.++++.+...|+ +|+.++++++..+.++ +.+....+ |..+ ..++.+.+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVAD-DAQIDALFASLKT 88 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCC-HHHHHHHHHHHHH
Confidence 456899999974 6899999999999999 8999988865544443 34432333 4331 233333333332
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 89 ~~g~id~lv~nAg~ 102 (271)
T 3ek2_A 89 HWDSLDGLVHSIGF 102 (271)
T ss_dssp HCSCEEEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 2478999998873
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0061 Score=53.56 Aligned_cols=73 Identities=15% Similarity=0.146 Sum_probs=49.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--EeCCCCCCchHHHHHHHHh--CCCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRIT--DGGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--vi~~~~~~~~~~~~i~~~~--~~~~d~v 267 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++ .+.... ..|..+ ..+....+.+.. .|++|++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~iDil 82 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTT-KEGCAIVAEATRQRLGGVDVI 82 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTS-HHHHHHHHHHHHHHTSSCSEE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 7899999988 9999999999999999 89999886542 122111 234431 223333333322 2479999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
+++.|
T Consensus 83 VnnAG 87 (261)
T 4h15_A 83 VHMLG 87 (261)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99876
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0033 Score=54.88 Aligned_cols=92 Identities=23% Similarity=0.279 Sum_probs=57.3
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh---CCCccEEEec
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT---DGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~---~~~~d~vid~ 270 (378)
+++||+|+ |++|.++++.+...|+ +|+++++++++.+. . +.. +..-.+.+.++. .+++|++|++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~--~~~---Dl~~~~~v~~~~~~~~~~id~lv~~ 69 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D--LST---AEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C--TTS---HHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c--ccc---CCCCHHHHHHHHHHhCCCCCEEEEC
Confidence 47899998 9999999999989999 89999887654321 1 111 111112233222 2478999999
Q ss_pred cCChH------------------HHHHHHHHhcc-CCccEEEeccCC
Q 017052 271 IGDTG------------------MITTALQSCCD-GWGLAVTLGVPK 298 (378)
Q Consensus 271 ~g~~~------------------~~~~~~~~l~~-~~G~~v~~g~~~ 298 (378)
.|... ..+.++..+.+ +.|++|.++...
T Consensus 70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~ 116 (257)
T 1fjh_A 70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA 116 (257)
T ss_dssp CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence 87532 12334444433 238899887543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.042 Score=48.47 Aligned_cols=90 Identities=19% Similarity=0.271 Sum_probs=63.0
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
.+|||+|+|.+|..++..+...|. +|+++++++++.+.+...+...+. |.. +.+ ..++|+||.+.+.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~--d~~---------~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGE--EPS---------LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSS--CCC---------CTTCCEEEECCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEeccc--ccc---------cCCCCEEEECCCc
Confidence 689999999999999999988898 999999999988888776655432 333 211 2378999999864
Q ss_pred h----HHHHHHHHHhcc---CCccEEEecc
Q 017052 274 T----GMITTALQSCCD---GWGLAVTLGV 296 (378)
Q Consensus 274 ~----~~~~~~~~~l~~---~~G~~v~~g~ 296 (378)
. ......++.+.. +-.+++.++.
T Consensus 74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 74 DSGGDPVLAALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence 2 223334444432 2267877653
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.015 Score=50.93 Aligned_cols=79 Identities=16% Similarity=0.269 Sum_probs=51.2
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHHH-hCCCcEEe--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~---~~~~~l~-~~g~~~vi--~~~~~~~~~~~~i~~~~~-- 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++ +..+.+. ..+....+ |..+ ..++.+.+.+...
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE-DASIDTMFAELGKVW 85 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5789999976 5899999999999999 899988876 2233332 23432333 4431 2334444444333
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 86 g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 86 PKFDGFVHSIGF 97 (265)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999998873
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.013 Score=54.19 Aligned_cols=91 Identities=16% Similarity=0.227 Sum_probs=64.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCe-EEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASR-IIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~-vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-.|++|.|+|.|.+|..+++.++..|. + |++.+++..+.+.++++|+..+ .++.+.+. ..|+|+.+
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvV~l~ 228 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGARRV-------ENIEELVA-----QADIVTVN 228 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEEEC-------SSHHHHHH-----TCSEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcEec-------CCHHHHHh-----cCCEEEEC
Confidence 368899999999999999999999999 6 9999988766666777775321 12323222 46888877
Q ss_pred cCChH----HH-HHHHHHhccCCccEEEecc
Q 017052 271 IGDTG----MI-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~ 296 (378)
+..+. .+ ...+..|+++ +.+++++.
T Consensus 229 ~P~t~~t~~li~~~~l~~mk~g-a~lIn~ar 258 (364)
T 2j6i_A 229 APLHAGTKGLINKELLSKFKKG-AWLVNTAR 258 (364)
T ss_dssp CCCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred CCCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence 75431 12 3456677775 77777754
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.13 E-value=0.013 Score=53.72 Aligned_cols=91 Identities=20% Similarity=0.157 Sum_probs=63.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|++|.|+|.|.+|..+++.++..|. +|++.+++....+.++++|+..+ .++.+.+. ..|+|+-++
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvV~l~~ 228 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------EDLNEMLP-----KCDVIVINM 228 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SCHHHHGG-----GCSEEEECS
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CCHHHHHh-----cCCEEEECC
Confidence 368899999999999999999999999 89999988766777777776432 12222222 367777766
Q ss_pred CCh-H----HHHHHHHHhccCCccEEEecc
Q 017052 272 GDT-G----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 272 g~~-~----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..+ + .-...+..|+++ ..+|+++.
T Consensus 229 Plt~~t~~li~~~~l~~mk~g-ailIN~aR 257 (351)
T 3jtm_A 229 PLTEKTRGMFNKELIGKLKKG-VLIVNNAR 257 (351)
T ss_dssp CCCTTTTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred CCCHHHHHhhcHHHHhcCCCC-CEEEECcC
Confidence 531 1 124566777775 77777653
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.015 Score=51.27 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=51.7
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHhC-
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~~- 261 (378)
..++++||+|+ |++|.++++.+...|+ +|+.+ .++.++.+.+ ++.+... .+ |..+ ..++.+.+.+...
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN-AADIAAMFSAVDRQ 101 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 35789999988 9999999999999999 67665 7777665543 2334333 22 3331 2233333333322
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 102 ~g~id~li~nAg~ 114 (272)
T 4e3z_A 102 FGRLDGLVNNAGI 114 (272)
T ss_dssp HSCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 378999998873
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.013 Score=50.87 Aligned_cols=79 Identities=27% Similarity=0.312 Sum_probs=50.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhCCCcEE---eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTEF---LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~----l~~~g~~~v---i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++ +.++.+. ++..+.... .|..+ ..++.+.+.+.. .
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD-ADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 4688999988 9999999999999999 7777655 5454433 333454332 23331 223333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 81 g~id~lv~nAg~ 92 (246)
T 3osu_A 81 GSLDVLVNNAGI 92 (246)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999874
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=96.12 E-value=0.012 Score=50.75 Aligned_cols=78 Identities=18% Similarity=0.262 Sum_probs=50.7
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--CC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~-v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~--~~ 262 (378)
|+++||+|+ |++|..+++.+...|+ +|++ ..+++++.+.+ ++.+... . .|..+ ..++.+.+.+.. .+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 578999988 9999999999999999 7877 57887665433 2234322 2 23331 233333333322 23
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|++|.+.|.
T Consensus 79 ~id~li~~Ag~ 89 (244)
T 1edo_A 79 TIDVVVNNAGI 89 (244)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999998873
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.0098 Score=55.66 Aligned_cols=83 Identities=20% Similarity=0.208 Sum_probs=53.9
Q ss_pred cCC-CCCCeEEEEcc-ChHHHHHHHHHHH-cCCCeEEEEcCChhh----------------HHHHHhCCCcEE-e--CCC
Q 017052 189 ADI-SKGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEK----------------CEKAKAFGVTEF-L--NPN 246 (378)
Q Consensus 189 ~~~-~~g~~VLI~Ga-g~vG~~aiqla~~-~g~~~vi~v~~~~~~----------------~~~l~~~g~~~v-i--~~~ 246 (378)
..+ +.++++||+|+ +++|++.+..+.. .|+ +|+.++++.+. .+.+++.|.... + |..
T Consensus 55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt 133 (422)
T 3s8m_A 55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF 133 (422)
T ss_dssp CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence 345 45788999988 8999999988887 999 88888776432 144566675442 2 333
Q ss_pred CCCchHH---HHHHHHhCCCccEEEeccCC
Q 017052 247 DNNEPVQ---QVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 247 ~~~~~~~---~~i~~~~~~~~d~vid~~g~ 273 (378)
+ ..... +.+.+..+|++|+++++.|.
T Consensus 134 d-~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 134 S-DAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp S-HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred C-HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 1 22222 23333222689999998875
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.042 Score=49.56 Aligned_cols=91 Identities=23% Similarity=0.260 Sum_probs=62.5
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhCCCc-EEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~~g~~-~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.+|.|+|.|.+|..+++.++..|.. +|++.++++++.+.++++|.. ..... ..++ .+ ...|+||-|+.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~---~~~~--~~-----~~aDvVilavp 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS---IAKV--ED-----FSPDFVMLSSP 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC---TTGG--GG-----GCCSEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCC---HHHH--hh-----ccCCEEEEeCC
Confidence 6899999999999999999988864 799999999999999888863 22211 1110 01 16799998887
Q ss_pred ChH---HHHHHHHHhccCCccEEEecc
Q 017052 273 DTG---MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~---~~~~~~~~l~~~~G~~v~~g~ 296 (378)
... .+......++++ ..++.++.
T Consensus 104 ~~~~~~vl~~l~~~l~~~-~iv~d~~S 129 (314)
T 3ggo_A 104 VRTFREIAKKLSYILSED-ATVTDQGS 129 (314)
T ss_dssp GGGHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred HHHHHHHHHHHhhccCCC-cEEEECCC
Confidence 532 233444556664 55555543
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=96.09 E-value=0.003 Score=55.00 Aligned_cols=75 Identities=17% Similarity=0.250 Sum_probs=50.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh--CCCccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT--DGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~--~~~~d~vid 269 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+. + ...|..+ ..++.+.+.+.. .+++|++|+
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~-~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999988 9999999999999999 8999988766543221 1 2344442 223333333322 247899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 88 ~Ag~ 91 (247)
T 1uzm_A 88 NAGL 91 (247)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 8874
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.012 Score=52.27 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=52.2
Q ss_pred CCCCeEEEEcc-Ch--HHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHh-CCCcEEe--CCCCCCchHHHHHHHHh--C
Q 017052 192 SKGSTVVIFGL-GT--VGLSVAQGAKARGASRIIGVDTNP--EKCEKAKA-FGVTEFL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~--vG~~aiqla~~~g~~~vi~v~~~~--~~~~~l~~-~g~~~vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
-.++++||+|+ |. +|.++++.+...|+ +|+.++++. +..+.+.+ .+....+ |..+ ..++.+.+.+.. .
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVIS-DQEIKDLFVELGKVW 101 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTC-HHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCC-HHHHHHHHHHHHHHc
Confidence 35789999985 44 99999999999999 899998877 45444433 3332333 3331 233333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 102 g~id~li~nAg~ 113 (280)
T 3nrc_A 102 DGLDAIVHSIAF 113 (280)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 478999998873
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.0064 Score=55.32 Aligned_cols=77 Identities=17% Similarity=0.333 Sum_probs=49.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHhCCC---cEEeCCCCCC-chHHHHHHHHhCCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC--EKAKAFGV---TEFLNPNDNN-EPVQQVIKRITDGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~--~~l~~~g~---~~vi~~~~~~-~~~~~~i~~~~~~~~d 265 (378)
.+++|||+|+ |.+|..+++.+...|. +|+++++++++. +.++.++. -..+..+-.+ ..+.+.+... ++|
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d 77 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV---QPD 77 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH---CCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc---CCC
Confidence 3678999998 9999999998888898 999998876543 34444431 1222221012 2222223222 689
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+||.+.+.
T Consensus 78 ~vih~A~~ 85 (345)
T 2z1m_A 78 EVYNLAAQ 85 (345)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999874
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.081 Score=41.96 Aligned_cols=96 Identities=6% Similarity=0.052 Sum_probs=59.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHHHh---CCCcEEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN-PEKCEKAKA---FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~-~~~~~~l~~---~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
..++|+|.|+|.+|..+++.+...|. +|++++++ +++.+.++. .|...+. -+ . .-.+.+.+..-.++|.|+
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~-gd--~-~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GD--S-NDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SC--T-TSHHHHHHHTTTTCSEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEE-cC--C-CCHHHHHHcChhhCCEEE
Confidence 35679999999999999999999998 89999887 465554442 2443332 22 1 112234433223789999
Q ss_pred eccCChHHH---HHHHHHhccCCccEEEe
Q 017052 269 ECIGDTGMI---TTALQSCCDGWGLAVTL 294 (378)
Q Consensus 269 d~~g~~~~~---~~~~~~l~~~~G~~v~~ 294 (378)
-+++....- ....+.+.+. .+++..
T Consensus 77 ~~~~~d~~n~~~~~~a~~~~~~-~~ii~~ 104 (153)
T 1id1_A 77 ALSDNDADNAFVVLSAKDMSSD-VKTVLA 104 (153)
T ss_dssp ECSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred EecCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence 998874322 2233444444 566553
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.0018 Score=56.03 Aligned_cols=98 Identities=15% Similarity=0.157 Sum_probs=66.9
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC----cEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV----TEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~----~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
..+|.+||-+|.| .|..+..+++..+. ++++++.+++-.+.+++... ...+. ..++...+..+..+.||.
T Consensus 58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~----~~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL----KGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE----ESCHHHHGGGSCTTCEEE
T ss_pred ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEE----eehHHhhcccccccCCce
Confidence 4689999999987 47777888877666 89999999999888876432 11111 123333333444447987
Q ss_pred E-EeccCC----------hHHHHHHHHHhccCCccEEEec
Q 017052 267 S-FECIGD----------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 267 v-id~~g~----------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
| +|++.. ...+.++.+.|+++ |+++.+.
T Consensus 132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~ 170 (236)
T 3orh_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred EEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence 7 465532 13466788999997 9998763
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.028 Score=51.25 Aligned_cols=76 Identities=16% Similarity=0.222 Sum_probs=49.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHHhC------CCcEEeCCCCCCchHHHHHHHHhC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAKAF------GVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----~~~~~l~~~------g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
.+++|||+|+ |.+|..+++.+...|. +|++++++. +..+.++.. .--.++..+-.+. +.+.++..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~ 99 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL---TTCEQVMK 99 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH---HHHHHHTT
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH---HHHHHHhc
Confidence 4679999998 9999999999999998 899998854 333444332 2222332221122 23333333
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
++|+||.+.+.
T Consensus 100 -~~d~Vih~A~~ 110 (351)
T 3ruf_A 100 -GVDHVLHQAAL 110 (351)
T ss_dssp -TCSEEEECCCC
T ss_pred -CCCEEEECCcc
Confidence 79999999874
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.05 E-value=0.014 Score=50.28 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=51.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCC------eEEEEcCChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHH
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGAS------RIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~------~vi~v~~~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~ 259 (378)
++++||+|+ |++|..+++.+...|+. +|+.+++++++.+.+.+ .+... . .|..+ ..++.+.+.++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~ 80 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHI 80 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC-HHHHHHHHHHH
Confidence 578999988 99999999888888874 68888898877654432 24322 2 23331 22333333332
Q ss_pred h--CCCccEEEeccC
Q 017052 260 T--DGGADYSFECIG 272 (378)
Q Consensus 260 ~--~~~~d~vid~~g 272 (378)
. .+++|++|.+.|
T Consensus 81 ~~~~g~id~li~~Ag 95 (244)
T 2bd0_A 81 VERYGHIDCLVNNAG 95 (244)
T ss_dssp HHHTSCCSEEEECCC
T ss_pred HHhCCCCCEEEEcCC
Confidence 2 247999999887
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.01 Score=52.48 Aligned_cols=96 Identities=15% Similarity=0.195 Sum_probs=59.8
Q ss_pred eEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 196 TVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+|||+|+ |.+|..+++.+... |. +|+++++++++.+.+...+...+ .|.. +. +.+.+... ++|+||.+.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~--d~---~~~~~~~~-~~d~vi~~a 73 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYG--DE---AALTSALQ-GVEKLLLIS 73 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTT--CH---HHHHHHTT-TCSEEEECC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCC--CH---HHHHHHHh-CCCEEEEeC
Confidence 4899998 99999999888877 88 89999998877665555555433 2333 22 22333322 689999988
Q ss_pred CCh-----HHHHHHHHHhccC-CccEEEeccCC
Q 017052 272 GDT-----GMITTALQSCCDG-WGLAVTLGVPK 298 (378)
Q Consensus 272 g~~-----~~~~~~~~~l~~~-~G~~v~~g~~~ 298 (378)
+.. .....+++.+... .++++.++...
T Consensus 74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~ 106 (286)
T 2zcu_A 74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH 106 (286)
T ss_dssp --------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred CCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 742 1223344444332 25788776543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0086 Score=52.31 Aligned_cols=74 Identities=22% Similarity=0.250 Sum_probs=49.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+. ... ..|..+ ..++.+.+.+.. .+++|++|
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d-~~~v~~~~~~~~~~~g~iD~lv 92 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITD-TEQVEQAYKEIEETHGPVEVLI 92 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTS-HHHHHHHHHHHHHHTCSCSEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999998 9999999999999999 89999887655321 111 224431 223333333322 24789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 93 ~nAg~ 97 (253)
T 2nm0_A 93 ANAGV 97 (253)
T ss_dssp EECSC
T ss_pred ECCCC
Confidence 98874
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.022 Score=49.86 Aligned_cols=79 Identities=22% Similarity=0.390 Sum_probs=50.6
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHH-hCCCcEEe--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~---~~~~l~-~~g~~~vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++++ ..+.+. ..+....+ |..+ ..++.+.+.+.. .
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 84 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQ-DEELDALFAGVKEAF 84 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4789999986 5899999998888899 8999988875 222232 23432333 4431 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 85 g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 85 GGLDYLVHAIAF 96 (261)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 378999999873
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.011 Score=51.62 Aligned_cols=79 Identities=20% Similarity=0.302 Sum_probs=50.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHh----CCCcE-E--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC-EKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~-~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|++++++.++. +.+++ .+... . .|..+ ..++.+.+.+.. .
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL 90 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC-HHHHHHHHHHHHHhc
Confidence 4678999998 9999999999988999 899998854432 22222 24332 2 24431 233333344332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 91 ~~id~li~~Ag~ 102 (265)
T 1h5q_A 91 GPISGLIANAGV 102 (265)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 478999998874
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.013 Score=49.93 Aligned_cols=100 Identities=12% Similarity=0.068 Sum_probs=67.7
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcC------CCeEEEEcCChhhHHHHHhC----C-----Cc--EEeCCCCCCchH
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARG------ASRIIGVDTNPEKCEKAKAF----G-----VT--EFLNPNDNNEPV 252 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g------~~~vi~v~~~~~~~~~l~~~----g-----~~--~vi~~~~~~~~~ 252 (378)
.++++++||-+|+|. |..++.+++..+ . +|++++.+++..+.+++. + .+ .++..+- ...+
T Consensus 77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~ 153 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNS-YVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI-YQVN 153 (227)
T ss_dssp TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTC-EEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG-GGCC
T ss_pred hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCC-EEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh-Hhcc
Confidence 578899999999876 888888998876 4 899999999888777652 3 11 2222210 0111
Q ss_pred HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 253 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+.. ...+.||+|+........+..+.+.|+++ |+++..-
T Consensus 154 ~~~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~ 193 (227)
T 2pbf_A 154 EEEK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPI 193 (227)
T ss_dssp HHHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEE
T ss_pred cccC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence 0000 11247999987666556678889999997 9987663
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.028 Score=51.54 Aligned_cols=88 Identities=24% Similarity=0.255 Sum_probs=62.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++. +.+.+...|+..+ .++.+.+. ..|+|+-++.
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~ell~-----~aDiV~l~~P 224 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDALFE-----QSDVLSVHLR 224 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHHHHh-----hCCEEEEecc
Confidence 58899999999999999999999999 999998875 4455566776421 13333333 3688887664
Q ss_pred ChH-----HHHHHHHHhccCCccEEEec
Q 017052 273 DTG-----MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~~-----~~~~~~~~l~~~~G~~v~~g 295 (378)
.+. .-...+..|+++ ..+|+++
T Consensus 225 lt~~t~~li~~~~l~~mk~g-ailIN~a 251 (352)
T 3gg9_A 225 LNDETRSIITVADLTRMKPT-ALFVNTS 251 (352)
T ss_dssp CSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred CcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence 321 123566778876 7888776
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.015 Score=51.52 Aligned_cols=95 Identities=14% Similarity=0.239 Sum_probs=64.1
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+.......| +..++ -.|++|+|+|+| .+|.-+++++...|+ +|+.+.+. ..
T Consensus 144 ~~PcTp~gi~~ll-~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~---------------------t~ 200 (301)
T 1a4i_A 144 FIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSK---------------------TA 200 (301)
T ss_dssp CCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT---------------------CS
T ss_pred ccCchHHHHHHHH-HHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECC---------------------cc
Confidence 4555433333333 44444 479999999997 689999999999999 88887532 12
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ .+|+||.++|.+..+.. ..++++ ..++++|...
T Consensus 201 ~L~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDVgi~~ 240 (301)
T 1a4i_A 201 HLDEEVN-----KGDILVVATGQPEMVKG--EWIKPG-AIVIDCGINY 240 (301)
T ss_dssp SHHHHHT-----TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCBC
T ss_pred cHHHHhc-----cCCEEEECCCCcccCCH--HHcCCC-cEEEEccCCC
Confidence 3434443 58999999998644322 336775 8888887653
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.027 Score=51.29 Aligned_cols=88 Identities=20% Similarity=0.371 Sum_probs=62.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|++|.|+|.|.+|..+++.++..|. +|++.+++.++ +.++.+|... . ++.+.+. ..|+|+.++
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~----~l~~~l~-----~aDvVil~v 212 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF----K----PLEDLLR-----ESDFVVLAV 212 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE----C----CHHHHHH-----HCSEEEECC
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc----C----CHHHHHh-----hCCEEEECC
Confidence 357899999999999999999999999 89999998877 5555666521 1 2333333 368888887
Q ss_pred CChH----HH-HHHHHHhccCCccEEEec
Q 017052 272 GDTG----MI-TTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 272 g~~~----~~-~~~~~~l~~~~G~~v~~g 295 (378)
..+. .+ ...+..++++ ..+++++
T Consensus 213 p~~~~t~~~i~~~~~~~mk~~-ailIn~s 240 (334)
T 2dbq_A 213 PLTRETYHLINEERLKLMKKT-AILINIA 240 (334)
T ss_dssp CCCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred CCChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence 6532 12 3456777775 7777765
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.018 Score=51.46 Aligned_cols=92 Identities=13% Similarity=0.174 Sum_probs=57.5
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hhHHHHH---hCCCcEE-eCCCCCCchHHHHHHHHhC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-------EKCEKAK---AFGVTEF-LNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-------~~~~~l~---~~g~~~v-i~~~~~~~~~~~~i~~~~~ 261 (378)
+++|||+|+ |.+|..+++.+...|. +|+++++++ ++.+.++ ..++..+ .|.. +. +.+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~--d~---~~l~~~~~ 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIN--DH---ETLVKAIK 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTT--CH---HHHHHHHT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCC--CH---HHHHHHHh
Confidence 468999998 9999999998888898 888888876 5544333 3455433 2443 22 22333322
Q ss_pred CCccEEEeccCCh--HHHHHHHHHhccC--CccEE
Q 017052 262 GGADYSFECIGDT--GMITTALQSCCDG--WGLAV 292 (378)
Q Consensus 262 ~~~d~vid~~g~~--~~~~~~~~~l~~~--~G~~v 292 (378)
++|+||.+++.. .....+++.+... -.+++
T Consensus 76 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 76 -QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp -TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred -CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 689999998752 2233444444432 14666
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=95.99 E-value=0.043 Score=48.80 Aligned_cols=75 Identities=20% Similarity=0.271 Sum_probs=51.0
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC----CCcE-EeCCCCCCchHHHHHHHHhCCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF----GVTE-FLNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~----g~~~-vi~~~~~~~~~~~~i~~~~~~~~ 264 (378)
.+|+++||+|+ |++|.+++..+...|+ +|+.+.++.++.+.+. ++ +... ..+.. +.+ .+.+.. ..+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~--~~~---~~~~~~-~~~ 189 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA--DDA---SRAEAV-KGA 189 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC--SHH---HHHHHT-TTC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCC--CHH---HHHHHH-HhC
Confidence 46899999995 9999999999999999 7999999887765442 22 2222 23443 211 222222 158
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++++++|.
T Consensus 190 DvlVn~ag~ 198 (287)
T 1lu9_A 190 HFVFTAGAI 198 (287)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999963
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.018 Score=51.04 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=51.3
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCC---cEEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---TEFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~---~~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
-.+++++|+|+|++|.+++..+...|+.+|+++.++.++.+.+ ++++. .....++ ++ . ..+|+|
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~----~l-------~-~~aDiI 191 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE----QL-------K-QSYDVI 191 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG----GC-------C-SCEEEE
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH----Hh-------c-CCCCEE
Confidence 3688999999999999999999899976899999998886554 44432 1233222 11 1 378999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|+|++.
T Consensus 192 InaTp~ 197 (281)
T 3o8q_A 192 INSTSA 197 (281)
T ss_dssp EECSCC
T ss_pred EEcCcC
Confidence 999875
|
| >3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.085 Score=49.15 Aligned_cols=112 Identities=19% Similarity=0.198 Sum_probs=71.3
Q ss_pred hhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----------CCC--cE--EeC
Q 017052 180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----------FGV--TE--FLN 244 (378)
Q Consensus 180 ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----------~g~--~~--vi~ 244 (378)
..+..+....+++++++||=+|+| .|..++++|+..|+.++++++.+++-.+.+++ +|. .. ++.
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 334445577889999999999986 48888899988898669999999865554432 343 23 222
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEec-c--CC--hHHHHHHHHHhccCCccEEEeccCC
Q 017052 245 PNDNNEPVQQVIKRITDGGADYSFEC-I--GD--TGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~~~d~vid~-~--g~--~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
-+-.+..+...+ ..+|+|+-. . .. ...+.+.++.|+++ |++|......
T Consensus 239 GD~~~lp~~d~~-----~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f~ 291 (438)
T 3uwp_A 239 GDFLSEEWRERI-----ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPFA 291 (438)
T ss_dssp CCTTSHHHHHHH-----HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCSS
T ss_pred CcccCCcccccc-----CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeeccc
Confidence 221122222111 158998831 1 11 23466778889997 9999875443
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0075 Score=49.65 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=64.9
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHHhC
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~~~ 261 (378)
...++++++||-+|+|. |..++.+|+. +. +|++++.+++..+.+++ .+.+. ++..+ ... +....+
T Consensus 17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~--~~~----l~~~~~ 87 (185)
T 3mti_A 17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDG--HEN----LDHYVR 87 (185)
T ss_dssp HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESC--GGG----GGGTCC
T ss_pred HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCc--HHH----HHhhcc
Confidence 34578899999998864 7777888877 66 99999999988877754 34322 22211 111 111223
Q ss_pred CCccEEEeccCC---------------hHHHHHHHHHhccCCccEEEecc
Q 017052 262 GGADYSFECIGD---------------TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~~~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+.||+|+-..+. ...+..+.+.|+++ |+++.+..
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 136 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIY 136 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 479998754321 13457778899997 99887643
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.95 E-value=0.0059 Score=55.45 Aligned_cols=78 Identities=15% Similarity=0.225 Sum_probs=47.8
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhCC--C-cEEe--CCCCCCchHHHHHHHHhCC
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFG--V-TEFL--NPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~--~~~l~~~g--~-~~vi--~~~~~~~~~~~~i~~~~~~ 262 (378)
-+++.+|||+|+ |.+|..+++.+...|. +|++++++.++ .+.++.+. . -.++ |..+ ...+.+.+...
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~--- 85 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD-ACSVQRAVIKA--- 85 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC-HHHHHHHHHHH---
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCC-HHHHHHHHHHc---
Confidence 467899999998 9999999999988898 89999887653 12333331 1 1122 3321 12222223221
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+||.+.+.
T Consensus 86 ~~d~Vih~A~~ 96 (335)
T 1rpn_A 86 QPQEVYNLAAQ 96 (335)
T ss_dssp CCSEEEECCSC
T ss_pred CCCEEEECccc
Confidence 68999999874
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.026 Score=47.52 Aligned_cols=97 Identities=16% Similarity=0.137 Sum_probs=67.4
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE--eCCCCCCchHHHHHHHHhCCCccE
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v--i~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
..+.++.+||-+|+|. |..+..+++. |. ++++++.+++..+.+++.+...+ +..+ ..++ ...+.+|+
T Consensus 42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d--~~~~------~~~~~~D~ 110 (218)
T 3ou2_A 42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQD--LFDW------TPDRQWDA 110 (218)
T ss_dssp TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECC--TTSC------CCSSCEEE
T ss_pred hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEecc--cccC------CCCCceeE
Confidence 3477888999999864 7777777777 77 99999999999999988663332 2221 1111 12348999
Q ss_pred EEeccC-----C---hHHHHHHHHHhccCCccEEEeccC
Q 017052 267 SFECIG-----D---TGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 267 vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
|+-... . ...+..+.+.|+++ |+++.....
T Consensus 111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~ 148 (218)
T 3ou2_A 111 VFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVT 148 (218)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEEC
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 985432 1 34677888999997 998877543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=95.90 E-value=0.03 Score=51.18 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=51.9
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHh-CCC--cEEe--CCCCCCchHHHHHHHHhCCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA-FGV--TEFL--NPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~-~g~--~~vi--~~~~~~~~~~~~i~~~~~~~~ 264 (378)
-.+++|||+|+ |.+|..+++.+... |..+|+++++++.+.+.+.+ +.. -..+ |.. +. +.+.++.. ++
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~--d~---~~l~~~~~-~~ 92 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR--DL---ERLNYALE-GV 92 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTT--CH---HHHHHHTT-TC
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCC--CH---HHHHHHHh-cC
Confidence 35789999998 99999999888777 86589999999887665543 321 1222 333 22 23333332 68
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+||.+++.
T Consensus 93 D~Vih~Aa~ 101 (344)
T 2gn4_A 93 DICIHAAAL 101 (344)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999874
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.023 Score=50.04 Aligned_cols=94 Identities=19% Similarity=0.279 Sum_probs=62.7
Q ss_pred hchhhhhhHHHHHhhcCC-CCCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCch
Q 017052 174 LSCGLSAGLGAAWNVADI-SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251 (378)
Q Consensus 174 ~~~~~~ta~~al~~~~~~-~~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~ 251 (378)
.||+....+..| +..++ -.|++++|+|.| .+|..++.++...|+ +|+.+.+.. .+
T Consensus 140 ~PcTp~gv~~lL-~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t---------------------~~ 196 (285)
T 3p2o_A 140 LPCTPLGVMKLL-KAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT---------------------KD 196 (285)
T ss_dssp CCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SC
T ss_pred CCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc---------------------hh
Confidence 444433344333 44444 489999999985 589999999999999 888875431 12
Q ss_pred HHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 252 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 252 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+.+.++ .+|+||.++|.+..+. -..++++ ..++++|...
T Consensus 197 L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDVgi~~ 235 (285)
T 3p2o_A 197 LSLYTR-----QADLIIVAAGCVNLLR--SDMVKEG-VIVVDVGINR 235 (285)
T ss_dssp HHHHHT-----TCSEEEECSSCTTCBC--GGGSCTT-EEEEECCCEE
T ss_pred HHHHhh-----cCCEEEECCCCCCcCC--HHHcCCC-eEEEEeccCc
Confidence 333332 5799999999764432 2446775 7788887543
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.023 Score=50.39 Aligned_cols=93 Identities=19% Similarity=0.295 Sum_probs=62.6
Q ss_pred hchhhhhhHHHHHhhcCC-CCCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCch
Q 017052 174 LSCGLSAGLGAAWNVADI-SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251 (378)
Q Consensus 174 ~~~~~~ta~~al~~~~~~-~~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~ 251 (378)
.||+...++..| +..++ -.|++++|+|.| .+|..++.++...|+ +|+.+.+... +
T Consensus 145 ~PcTp~gv~~lL-~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~---------------------~ 201 (300)
T 4a26_A 145 TPCTAKGVIVLL-KRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTS---------------------T 201 (300)
T ss_dssp CCHHHHHHHHHH-HHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSC---------------------H
T ss_pred CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCC---------------------C
Confidence 455444444444 44444 589999999985 589999999999999 8888865222 2
Q ss_pred HH--HHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 252 VQ--QVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 252 ~~--~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+. +.++ .+|+||.++|.+..+.. ..++++ ..++++|..
T Consensus 202 l~l~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~ 241 (300)
T 4a26_A 202 EDMIDYLR-----TADIVIAAMGQPGYVKG--EWIKEG-AAVVDVGTT 241 (300)
T ss_dssp HHHHHHHH-----TCSEEEECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred chhhhhhc-----cCCEEEECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence 22 2333 57999999997644322 346775 778888753
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.023 Score=50.18 Aligned_cols=79 Identities=16% Similarity=0.267 Sum_probs=50.8
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHH-hCCCcEE--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKAK-AFGVTEF--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~---~~~~l~-~~g~~~v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++++ ..+.++ ..+.... .|..+ ..++.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKKDL 82 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999985 6899999999999999 8999988765 333332 2342222 24431 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 83 g~id~lv~nAg~ 94 (275)
T 2pd4_A 83 GSLDFIVHSVAF 94 (275)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 478999998873
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.016 Score=50.66 Aligned_cols=78 Identities=15% Similarity=0.198 Sum_probs=50.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHh----CCCcE-E--eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l~~----~g~~~-v--i~~~~~~~~~~~~i~~~~~-- 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+.+ +++..+.+++ .+... + .|..+ ..++.+.+.++..
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK-KEDLHKIVEEAMSHF 83 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHh
Confidence 4688999988 9999999999999999 7877755 4444444433 22222 2 24431 2333333433322
Q ss_pred CCccEEEeccC
Q 017052 262 GGADYSFECIG 272 (378)
Q Consensus 262 ~~~d~vid~~g 272 (378)
+++|++|.+.|
T Consensus 84 g~id~lv~~Ag 94 (264)
T 3i4f_A 84 GKIDFLINNAG 94 (264)
T ss_dssp SCCCEEECCCC
T ss_pred CCCCEEEECCc
Confidence 37999999998
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.022 Score=50.24 Aligned_cols=94 Identities=17% Similarity=0.289 Sum_probs=63.5
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+.......| +..++ -.|++++|+|+| .+|.-+++++...|+ +|+.+.+. ..
T Consensus 138 ~~PcTp~gi~~ll-~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~---------------------t~ 194 (288)
T 1b0a_A 138 LRPCTPRGIVTLL-ERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRF---------------------TK 194 (288)
T ss_dssp SCCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSS---------------------CS
T ss_pred CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeCC---------------------ch
Confidence 3455443433333 44443 579999999996 589999999999999 88887432 23
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++.+.++ .+|+||.++|.+..+.. ..++++ ..++++|..
T Consensus 195 ~L~~~~~-----~ADIVI~Avg~p~lI~~--~~vk~G-avVIDVgi~ 233 (288)
T 1b0a_A 195 NLRHHVE-----NADLLIVAVGKPGFIPG--DWIKEG-AIVIDVGIN 233 (288)
T ss_dssp CHHHHHH-----HCSEEEECSCCTTCBCT--TTSCTT-CEEEECCCE
T ss_pred hHHHHhc-----cCCEEEECCCCcCcCCH--HHcCCC-cEEEEccCC
Confidence 4445555 37999999998653222 235665 778888754
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.049 Score=46.16 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=54.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|+|.|+|.+|..+++.+...|. .|+++++++++.+.+. .++...+. -+..+ .+.+.+..-..+|+++-+++..
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~-gd~~~---~~~l~~a~i~~ad~vi~~~~~d 76 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIH-GDGSH---KEILRDAEVSKNDVVVILTPRD 76 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEE-SCTTS---HHHHHHHTCCTTCEEEECCSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEE-cCCCC---HHHHHhcCcccCCEEEEecCCc
Confidence 58899999999999999999999 8999999999988764 46664433 22112 2234443233789999999875
Q ss_pred H
Q 017052 275 G 275 (378)
Q Consensus 275 ~ 275 (378)
.
T Consensus 77 ~ 77 (218)
T 3l4b_C 77 E 77 (218)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.007 Score=54.83 Aligned_cols=102 Identities=22% Similarity=0.280 Sum_probs=68.1
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~ 257 (378)
+.....++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ .|... ++..+ ..+. ..
T Consensus 67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d--~~~~---~~ 140 (317)
T 1dl5_A 67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGD--GYYG---VP 140 (317)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC--GGGC---CG
T ss_pred HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECC--hhhc---cc
Confidence 34566788999999999876 7888888887542 379999999998877765 34432 22111 1110 00
Q ss_pred HHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.+|+|+....-......+.+.|+++ |+++..-
T Consensus 141 --~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~ 175 (317)
T 1dl5_A 141 --EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI 175 (317)
T ss_dssp --GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred --cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence 1247999987654433446778899997 9987763
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.025 Score=49.77 Aligned_cols=94 Identities=20% Similarity=0.278 Sum_probs=62.6
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
..||+.......| +..++ -.|++++|+|.| .+|..+++++...|+ +|+.+.+.. .
T Consensus 140 ~~PcTp~gv~~lL-~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t---------------------~ 196 (285)
T 3l07_A 140 LESCTPKGIMTML-REYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFT---------------------T 196 (285)
T ss_dssp CCCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------S
T ss_pred CCCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------h
Confidence 3454444444434 44444 489999999985 589999999999999 887774421 1
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++.+.++ .+|+||.++|.+..+. ...++++ ..++++|..
T Consensus 197 ~L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~ 235 (285)
T 3l07_A 197 DLKSHTT-----KADILIVAVGKPNFIT--ADMVKEG-AVVIDVGIN 235 (285)
T ss_dssp SHHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCE
T ss_pred hHHHhcc-----cCCEEEECCCCCCCCC--HHHcCCC-cEEEEeccc
Confidence 2333332 5799999999764432 2346775 777888654
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.029 Score=48.69 Aligned_cols=101 Identities=19% Similarity=0.241 Sum_probs=65.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh---
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT--- 260 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~--- 260 (378)
...++++||-+|+| .|..++.+|+.+ +. ++++++.+++..+.+++ .|....+... ..+..+.+..+.
T Consensus 76 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~ 151 (247)
T 1sui_A 76 KLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKDE 151 (247)
T ss_dssp HHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHSG
T ss_pred HhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEE--ECCHHHHHHHHHhcc
Confidence 34567899999875 477788888876 55 99999999988877764 4542211111 112223333331
Q ss_pred --CCCccEEEeccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 261 --DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 --~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+.||+||-.... ...+..+.+.|+++ |.++.-.
T Consensus 152 ~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~ 190 (247)
T 1sui_A 152 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN 190 (247)
T ss_dssp GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred CCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence 3479998833221 35677889999997 9987643
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.016 Score=52.60 Aligned_cols=76 Identities=16% Similarity=0.154 Sum_probs=51.1
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-----C--CcEE--eCCCCCCchHHHHHHHHh
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-----G--VTEF--LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-----g--~~~v--i~~~~~~~~~~~~i~~~~ 260 (378)
..++++|||+|+ |.+|..++..+...|. +|++++++.++.+.+.+. + ...+ .|..+ ...+ .++.
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~----~~~~ 81 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK-QGAY----DEVI 81 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS-TTTT----TTTT
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC-hHHH----HHHH
Confidence 446789999998 9999999998888898 899999988776544331 2 2222 13321 1112 2211
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.++|+||.+.+.
T Consensus 82 -~~~d~vih~A~~ 93 (342)
T 1y1p_A 82 -KGAAGVAHIASV 93 (342)
T ss_dssp -TTCSEEEECCCC
T ss_pred -cCCCEEEEeCCC
Confidence 168999999874
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.056 Score=47.98 Aligned_cols=74 Identities=22% Similarity=0.331 Sum_probs=52.6
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-|+..+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~advvi~~v~~~ 68 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-------SSPAEVCA-----ACDITIAMLADP 68 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-------SCHHHHHH-----HCSEEEECCSSH
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHH-----cCCEEEEEcCCH
Confidence 368899999999999998888898 89999999999888877765321 12222222 357777777765
Q ss_pred HHHHHHH
Q 017052 275 GMITTAL 281 (378)
Q Consensus 275 ~~~~~~~ 281 (378)
..+...+
T Consensus 69 ~~~~~v~ 75 (287)
T 3pdu_A 69 AAAREVC 75 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444433
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=95.84 E-value=0.04 Score=50.66 Aligned_cols=49 Identities=22% Similarity=0.364 Sum_probs=41.7
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVT 240 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~ 240 (378)
--.|++|+|.|.|.+|..+++.+...|+ +|++.+++.++.+ ++++++++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~ 219 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD 219 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence 3578999999999999999999999999 8999999988766 45556653
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.033 Score=50.04 Aligned_cols=74 Identities=24% Similarity=0.320 Sum_probs=47.0
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.++.++|||+|+ |.+|..+++.+...|. +|++++++.++ +. ++...+ .|..+ ...+.+.+.. +++|+||
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~~~~~Dl~d-~~~~~~~~~~---~~~d~vi 79 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVEMISLDIMD-SQRVKKVISD---IKPDYIF 79 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEEEEECCTTC-HHHHHHHHHH---HCCSEEE
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceeeEEECCCCC-HHHHHHHHHh---cCCCEEE
Confidence 346688999998 9999999999988998 89999887665 21 233222 23321 1222222222 2689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.+.
T Consensus 80 h~A~~ 84 (321)
T 2pk3_A 80 HLAAK 84 (321)
T ss_dssp ECCSC
T ss_pred EcCcc
Confidence 99874
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.83 E-value=0.0063 Score=53.40 Aligned_cols=76 Identities=14% Similarity=0.219 Sum_probs=49.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHh--CCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~--~~~~d~vi 268 (378)
.++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.. .... ..|..+ ..++.+.+.+.. .+++|+++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DIHTVAGDISK-PETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TEEEEESCTTS-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ceEEEEccCCC-HHHHHHHHHHHHHHCCCCCEEE
Confidence 5789999988 9999999999999999 899998876543211 1111 123331 223333333322 23799999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 102 ~nAg~ 106 (260)
T 3un1_A 102 NNAGV 106 (260)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99873
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=95.83 E-value=0.037 Score=50.71 Aligned_cols=91 Identities=19% Similarity=0.319 Sum_probs=61.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~-~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-.|++|.|+|.|.+|..+++.++ ..|. +|++.+++.++.+.+.++|...+ . ++.+.+. ..|+|+.+
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~---~----~l~ell~-----~aDvVil~ 227 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV---D----SLEELAR-----RSDCVSVS 227 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC---S----SHHHHHH-----HCSEEEEC
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe---C----CHHHHhc-----cCCEEEEe
Confidence 46889999999999999999999 9999 89999988776666666665321 1 2222232 35788777
Q ss_pred cCChH----HH-HHHHHHhccCCccEEEecc
Q 017052 271 IGDTG----MI-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~ 296 (378)
+..+. .+ ...+..|+++ ..++.++.
T Consensus 228 vp~~~~t~~li~~~~l~~mk~g-ailin~sr 257 (348)
T 2w2k_A 228 VPYMKLTHHLIDEAFFAAMKPG-SRIVNTAR 257 (348)
T ss_dssp CCCSGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred CCCChHHHHHhhHHHHhcCCCC-CEEEECCC
Confidence 65421 11 2455667765 66666543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.82 E-value=0.026 Score=50.10 Aligned_cols=79 Identities=18% Similarity=0.303 Sum_probs=50.6
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHH-hCCCcEE--eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKAK-AFGVTEF--LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~---~~~~l~-~~g~~~v--i~~~~~~~~~~~~i~~~~--~ 261 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.+ ..+.+. ..+.... .|..+ ..++.+.+.+.. .
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSL-DEDIKNLKKFLEENW 97 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999986 5899999999988999 8999988875 222222 2342222 24431 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 98 g~iD~lv~~Ag~ 109 (285)
T 2p91_A 98 GSLDIIVHSIAY 109 (285)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999998873
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=95.81 E-value=0.02 Score=53.17 Aligned_cols=80 Identities=21% Similarity=0.191 Sum_probs=51.6
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHH-cCCCeEEEEcCChhh----------------HHHHHhCCCcEE-e--CCCCCCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEK----------------CEKAKAFGVTEF-L--NPNDNNE 250 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~-~g~~~vi~v~~~~~~----------------~~~l~~~g~~~v-i--~~~~~~~ 250 (378)
..++++||+|+ +++|++.+..+.. .|+ +|+.++++.+. .+.+++.|.... + |..+ ..
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd-~~ 122 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS-DE 122 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS-HH
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC-HH
Confidence 56788899988 8999998888877 999 88888765432 224455665442 2 3331 23
Q ss_pred hHHHHHHHHh--CCCccEEEeccCC
Q 017052 251 PVQQVIKRIT--DGGADYSFECIGD 273 (378)
Q Consensus 251 ~~~~~i~~~~--~~~~d~vid~~g~ 273 (378)
+....+.+.. .|++|+++++.|.
T Consensus 123 ~v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 123 IKQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCcc
Confidence 3333333322 2579999999875
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.058 Score=44.08 Aligned_cols=98 Identities=17% Similarity=0.181 Sum_probs=66.2
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCC-cEEeCCCCCCchHHHHHHHHhC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV-TEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~-~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
....+.++.+||-+|+|. |..+..+++.. . ++++++.+++..+.+++ .+. +.+... ..++.+. +..
T Consensus 27 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~---~~~ 97 (192)
T 1l3i_A 27 CLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEA---LCK 97 (192)
T ss_dssp HHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHH---HTT
T ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEE---ecCHHHh---ccc
Confidence 455788999999999876 88888888766 5 99999999988877765 443 221111 1122221 222
Q ss_pred -CCccEEEeccC---ChHHHHHHHHHhccCCccEEEe
Q 017052 262 -GGADYSFECIG---DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 262 -~~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
+.+|+|+.... -...+..+.+.++++ |+++..
T Consensus 98 ~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~ 133 (192)
T 1l3i_A 98 IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVT 133 (192)
T ss_dssp SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEE
T ss_pred CCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 37999985533 135677788889997 988775
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=95.80 E-value=0.017 Score=50.52 Aligned_cols=93 Identities=13% Similarity=0.234 Sum_probs=64.0
Q ss_pred hhchhhhhhHHHHHhhcCCCCCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCch
Q 017052 173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~ 251 (378)
.+||+.......| +..+ -.|++++|+|.| .+|..+++++...|+ +|+.+.+. ..+
T Consensus 131 ~~PcTp~gv~~lL-~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~---------------------t~~ 186 (276)
T 3ngx_A 131 LVPATPRAVIDIM-DYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSK---------------------TKD 186 (276)
T ss_dssp SCCHHHHHHHHHH-HHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT---------------------CSC
T ss_pred CCCCcHHHHHHHH-HHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCC---------------------ccc
Confidence 3445444444444 4555 789999999985 699999999999999 88888542 123
Q ss_pred HHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 252 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 252 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+.+.++ .+|+||.++|.+..+.. ..++++ ..++++|..
T Consensus 187 L~~~~~-----~ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~ 224 (276)
T 3ngx_A 187 IGSMTR-----SSKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGIN 224 (276)
T ss_dssp HHHHHH-----HSSEEEECSSCTTCBCG--GGCCTT-CEEEECCCE
T ss_pred HHHhhc-----cCCEEEECCCCCccccH--hhccCC-cEEEEeccC
Confidence 444454 37999999998644332 346775 777788654
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=95.79 E-value=0.027 Score=48.88 Aligned_cols=99 Identities=21% Similarity=0.260 Sum_probs=68.0
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~ 258 (378)
.....++++.+||-+|+|. |..+..+++..|. ++++++.+++..+.+++ .|.. .++..+ ..++.
T Consensus 29 ~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d--~~~~~----- 99 (256)
T 1nkv_A 29 GRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--AAGYV----- 99 (256)
T ss_dssp HHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--CTTCC-----
T ss_pred HHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECC--hHhCC-----
Confidence 3556788999999999875 7788889988888 89999999988777654 3432 222221 11110
Q ss_pred HhCCCccEEEecc------CChHHHHHHHHHhccCCccEEEec
Q 017052 259 ITDGGADYSFECI------GDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 259 ~~~~~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.||+|+-.. .-...+..+.+.|+++ |+++...
T Consensus 100 -~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~ 140 (256)
T 1nkv_A 100 -ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE 140 (256)
T ss_dssp -CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred -cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence 124799998421 2235678888899997 9988753
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.78 E-value=0.035 Score=50.39 Aligned_cols=77 Identities=14% Similarity=0.189 Sum_probs=48.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHh-CCC-cEEeCCCCCCc-hHHHHHHHHhCCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKA-FGV-TEFLNPNDNNE-PVQQVIKRITDGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~----~l~~-~g~-~~vi~~~~~~~-~~~~~i~~~~~~~~ 264 (378)
.+++|||+|+ |.+|..+++.+...|+ +|++++++.++.. .+.. .+. ..++..+-.+. .+.+.+.. +++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~ 79 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPI 79 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCC
Confidence 4678999998 9999999999999999 8999988654322 1211 121 22332221122 22222222 379
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+||++.+.
T Consensus 80 d~vih~A~~ 88 (341)
T 3enk_A 80 TAAIHFAAL 88 (341)
T ss_dssp CEEEECCCC
T ss_pred cEEEECccc
Confidence 999999874
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.029 Score=50.29 Aligned_cols=70 Identities=11% Similarity=0.091 Sum_probs=48.3
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+++|||+|+ |.+|..+++.+...|. +|+++++++.+.+ ++ +.. ++.. +.. .+.+.++.. ++|+||.+.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~-~~~~---Dl~-~~~~~~~~~-~~d~Vih~a~ 71 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYE-YRVS---DYT-LEDLINQLN-DVDAVVHLAA 71 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCE-EEEC---CCC-HHHHHHHTT-TCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceE-EEEc---ccc-HHHHHHhhc-CCCEEEEccc
Confidence 368999998 9999999999999998 8999999855554 43 333 2322 223 455555443 7999999987
Q ss_pred C
Q 017052 273 D 273 (378)
Q Consensus 273 ~ 273 (378)
.
T Consensus 72 ~ 72 (311)
T 3m2p_A 72 T 72 (311)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.022 Score=52.98 Aligned_cols=89 Identities=16% Similarity=0.082 Sum_probs=58.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++..+.+..+.+|+... .++.+.+. ..|+|+.++.
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l~ell~-----~aDvV~l~~P 256 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATREDMYP-----VCDVVTLNCP 256 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHGG-----GCSEEEECSC
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCHHHHHh-----cCCEEEEecC
Confidence 68899999999999999999999999 89999888766666666665321 11222111 3577666654
Q ss_pred ChH----HH-HHHHHHhccCCccEEEec
Q 017052 273 DTG----MI-TTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~~----~~-~~~~~~l~~~~G~~v~~g 295 (378)
.+. .+ ...+..|+++ ..+++++
T Consensus 257 lt~~t~~li~~~~l~~mk~g-ailIN~a 283 (393)
T 2nac_A 257 LHPETEHMINDETLKLFKRG-AYIVNTA 283 (393)
T ss_dssp CCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred CchHHHHHhhHHHHhhCCCC-CEEEECC
Confidence 211 11 3455566664 6666665
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.086 Score=47.42 Aligned_cols=88 Identities=18% Similarity=0.308 Sum_probs=60.8
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|... .. +..+.+. ..|+||.|+..+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~----~~~~~~~-----~~DvVi~av~~~ 97 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---GR----TPAEVVS-----TCDITFACVSDP 97 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---CS----CHHHHHH-----HCSEEEECCSSH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---cC----CHHHHHh-----cCCEEEEeCCCH
Confidence 579999999999999998888898 8999999999888887776531 11 2222232 468999888865
Q ss_pred HHHHHHHH-------HhccCCccEEEecc
Q 017052 275 GMITTALQ-------SCCDGWGLAVTLGV 296 (378)
Q Consensus 275 ~~~~~~~~-------~l~~~~G~~v~~g~ 296 (378)
..+...+. .+.++ ..++.++.
T Consensus 98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s~ 125 (316)
T 2uyy_A 98 KAAKDLVLGPSGVLQGIRPG-KCYVDMST 125 (316)
T ss_dssp HHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred HHHHHHHcCchhHhhcCCCC-CEEEECCC
Confidence 55555443 34443 45555543
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.041 Score=50.06 Aligned_cols=89 Identities=19% Similarity=0.231 Sum_probs=61.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.++.+.+.++|.... ++.+.+. ..|+|+.++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l~-----~aDvVi~~vp 219 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV--------STPELAA-----QSDFIVVACS 219 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC--------CHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC--------CHHHHHh-----hCCEEEEeCC
Confidence 47899999999999999999999999 89999987766666666664321 2222232 3688888776
Q ss_pred ChH----HH-HHHHHHhccCCccEEEecc
Q 017052 273 DTG----MI-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~----~~-~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. .+ ...+..++++ ..++.++.
T Consensus 220 ~~~~t~~~i~~~~~~~mk~g-ailIn~sr 247 (330)
T 2gcg_A 220 LTPATEGLCNKDFFQKMKET-AVFINISR 247 (330)
T ss_dssp CCTTTTTCBSHHHHHHSCTT-CEEEECSC
T ss_pred CChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence 421 12 3456677775 66666543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.066 Score=49.09 Aligned_cols=97 Identities=20% Similarity=0.215 Sum_probs=59.4
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHhC-CCcEE-eC-CCCCCchHHHHHHHHhCCCccEE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC--EKAKAF-GVTEF-LN-PNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~--~~l~~~-g~~~v-i~-~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
+++|||+|+ |.+|..+++.+...|. +|++++++.++. +.+... +...+ .| .. +. +.+.+... ++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~--d~---~~l~~~~~-~~d~V 77 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVTLFQGPLLN--NV---PLMDTLFE-GAHLA 77 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEEEEESCCTT--CH---HHHHHHHT-TCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCcEEEECCccC--CH---HHHHHHHh-cCCEE
Confidence 578999998 9999999988888898 899988877654 334433 33222 23 32 22 22333222 68999
Q ss_pred EeccCCh-----HHHHHHHHHhccC--CccEEEeccC
Q 017052 268 FECIGDT-----GMITTALQSCCDG--WGLAVTLGVP 297 (378)
Q Consensus 268 id~~g~~-----~~~~~~~~~l~~~--~G~~v~~g~~ 297 (378)
|.+.+.. .....+++.+... -+++|.++..
T Consensus 78 i~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 78 FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp EECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 9776542 1223444444433 1588887654
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.016 Score=49.45 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=65.2
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCC------CeEEEEcCChhhHHHHHhC----C-------CcEEeCCCCCCchH
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGA------SRIIGVDTNPEKCEKAKAF----G-------VTEFLNPNDNNEPV 252 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~------~~vi~v~~~~~~~~~l~~~----g-------~~~vi~~~~~~~~~ 252 (378)
.++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++. + .-.++..+ ...
T Consensus 81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d--~~~- 156 (227)
T 1r18_A 81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD--GRK- 156 (227)
T ss_dssp TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC--GGG-
T ss_pred hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC--ccc-
Confidence 578899999999875 8888888887652 3899999999887776542 1 11222221 110
Q ss_pred HHHHHHHhC-CCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 253 QQVIKRITD-GGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 253 ~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.. +.||+|+....-......+.+.|+++ |+++..
T Consensus 157 -----~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 193 (227)
T 1r18_A 157 -----GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVP 193 (227)
T ss_dssp -----CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEE
T ss_pred -----CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEE
Confidence 1122 47999987766555667888999997 987765
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.038 Score=50.40 Aligned_cols=95 Identities=16% Similarity=0.091 Sum_probs=58.5
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHH---hCCCcEE-eCCCCCCchHHHHHHHHhCCCc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAK---AFGVTEF-LNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----~~~~~l~---~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~ 264 (378)
..+|||+|+ |.+|..+++.+...|. +|+++++++ ++.+.++ ..++..+ .|..+ ...+.+.+.+ .++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d-~~~l~~~~~~---~~~ 84 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-QEAMEKILKE---HEI 84 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC-HHHHHHHHHH---TTC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC-HHHHHHHHhh---CCC
Confidence 468999998 9999999999988897 899998866 4554333 3455443 23331 2223333322 279
Q ss_pred cEEEeccCCh--HHHHHHHHHhccC--CccEEE
Q 017052 265 DYSFECIGDT--GMITTALQSCCDG--WGLAVT 293 (378)
Q Consensus 265 d~vid~~g~~--~~~~~~~~~l~~~--~G~~v~ 293 (378)
|+||.+.+.. .....+++.+... -.+++.
T Consensus 85 d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 85 DIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred CEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 9999998852 1233445555443 135553
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.052 Score=47.90 Aligned_cols=84 Identities=24% Similarity=0.387 Sum_probs=57.8
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|.|+|+|.+|.+++..+...|. +|+++++++++.+.+++.|... .... . .+. .+.|+||-|+...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~------~----~~~--~~~D~vi~av~~~ 68 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQD------L----SLL--QTAKIIFLCTPIQ 68 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESC------G----GGG--TTCSEEEECSCHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccCC------H----HHh--CCCCEEEEECCHH
Confidence 68899999999999999988898 8999999999988888877642 2211 1 111 2679999998753
Q ss_pred HHHHHHHH----HhccCCccEEEe
Q 017052 275 GMITTALQ----SCCDGWGLAVTL 294 (378)
Q Consensus 275 ~~~~~~~~----~l~~~~G~~v~~ 294 (378)
.....+. .+.++ ..++.+
T Consensus 69 -~~~~~~~~l~~~~~~~-~~vv~~ 90 (279)
T 2f1k_A 69 -LILPTLEKLIPHLSPT-AIVTDV 90 (279)
T ss_dssp -HHHHHHHHHGGGSCTT-CEEEEC
T ss_pred -HHHHHHHHHHhhCCCC-CEEEEC
Confidence 3333333 34443 445554
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.017 Score=53.35 Aligned_cols=75 Identities=19% Similarity=0.287 Sum_probs=49.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcEEe--CCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.+++|||+|+ |.+|..+++.+... |. +|++++++.++.+.+.....-.++ |..++...+.+.+. ++|+||
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vi 96 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVIL 96 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEE
Confidence 3578999998 99999999988877 88 999999987765544332222233 22211122222222 689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.+.
T Consensus 97 h~A~~ 101 (372)
T 3slg_A 97 PLVAI 101 (372)
T ss_dssp ECBCC
T ss_pred EcCcc
Confidence 98773
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.039 Score=53.37 Aligned_cols=79 Identities=19% Similarity=0.300 Sum_probs=52.7
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHHHhCCCcEE---eCCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CEKAKAFGVTEF---LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-------~~~l~~~g~~~v---i~~~~~~~~~~~~i~~~ 259 (378)
+++++++||+|+ |++|..++..+...|+.+++.+.++... .+.++..|.... .|..+ ...+.+.+..
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~- 333 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE-RDALAALVTA- 333 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC-HHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHhc-
Confidence 467899999988 9999999998888898668888887532 233444565432 23331 2233333332
Q ss_pred hCCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGD 273 (378)
Q Consensus 260 ~~~~~d~vid~~g~ 273 (378)
+++|+||.+.|.
T Consensus 334 --~~ld~VVh~AGv 345 (511)
T 2z5l_A 334 --YPPNAVFHTAGI 345 (511)
T ss_dssp --SCCSEEEECCCC
T ss_pred --CCCcEEEECCcc
Confidence 579999999873
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.024 Score=51.63 Aligned_cols=89 Identities=26% Similarity=0.400 Sum_probs=65.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|++|.|+|.|.+|..+++.++..|. +|++.+++.++ +.++.+|+.. . ++.+.+. ..|+|+.++
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~-~-------~l~ell~-----~aDvV~l~~ 227 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ-L-------PLEEIWP-----LCDFITVHT 227 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE-C-------CHHHHGG-----GCSEEEECC
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee-C-------CHHHHHh-----cCCEEEEec
Confidence 368899999999999999999999999 89999887666 3566777642 1 2222222 579999887
Q ss_pred CChH----HH-HHHHHHhccCCccEEEecc
Q 017052 272 GDTG----MI-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 272 g~~~----~~-~~~~~~l~~~~G~~v~~g~ 296 (378)
..+. .+ ...+..|+++ +.+++++.
T Consensus 228 P~t~~t~~li~~~~l~~mk~g-ailIN~ar 256 (335)
T 2g76_A 228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCAR 256 (335)
T ss_dssp CCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred CCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence 6532 12 3567788886 88888876
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.03 Score=49.27 Aligned_cols=95 Identities=16% Similarity=0.248 Sum_probs=64.4
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
..||+....+..| +..++ -.|++++|+|. +.+|..++.++...|+ +|+.+.+.. .
T Consensus 140 ~~PcTp~gv~~lL-~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T---------------------~ 196 (286)
T 4a5o_A 140 LRPCTPKGIMTLL-ASTGADLYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFT---------------------R 196 (286)
T ss_dssp SCCHHHHHHHHHH-HHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTC---------------------S
T ss_pred CCCCCHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCC---------------------c
Confidence 3455444444434 55554 48999999998 5699999999999999 888875421 2
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++.+.++ .+|+||.++|.+..+. -..++++ ..++++|...
T Consensus 197 ~L~~~~~-----~ADIVI~Avg~p~~I~--~~~vk~G-avVIDvgi~~ 236 (286)
T 4a5o_A 197 DLADHVS-----RADLVVVAAGKPGLVK--GEWIKEG-AIVIDVGINR 236 (286)
T ss_dssp CHHHHHH-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCSCS
T ss_pred CHHHHhc-----cCCEEEECCCCCCCCC--HHHcCCC-eEEEEecccc
Confidence 3334443 5799999999764432 2446775 7788887654
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=95.72 E-value=0.014 Score=51.41 Aligned_cols=78 Identities=18% Similarity=0.328 Sum_probs=50.7
Q ss_pred CCCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhCCCcE---EeCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTE---FLNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~~--~~~l~~~g~~~---vi~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++ .+..++++... ..|..+ ..++.+.+.+.. .+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 83 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN-EEHLASLAGRVTEAIG 83 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5789999974 7899999999999999 89999888765 23334454321 234431 223333333221 12
Q ss_pred ---CccEEEeccC
Q 017052 263 ---GADYSFECIG 272 (378)
Q Consensus 263 ---~~d~vid~~g 272 (378)
++|++|++.|
T Consensus 84 ~~~~iD~lv~nAg 96 (269)
T 2h7i_A 84 AGNKLDGVVHSIG 96 (269)
T ss_dssp TTCCEEEEEECCC
T ss_pred CCCCceEEEECCc
Confidence 6899999887
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=95.72 E-value=0.036 Score=53.33 Aligned_cols=78 Identities=17% Similarity=0.303 Sum_probs=52.4
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-------hHHHHHhCCCcEEe---CCCCCCchHHHHHHHHhC-C
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-------KCEKAKAFGVTEFL---NPNDNNEPVQQVIKRITD-G 262 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-------~~~~l~~~g~~~vi---~~~~~~~~~~~~i~~~~~-~ 262 (378)
+++||+|+ |++|..+++.+...|+.+++.+.++.. ..+.+++.|....+ |.. +..++.+.+.++.. +
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt-d~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAA-DREALAALLAELPEDA 318 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-CHHHHHHHHHTCCTTS
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCC-CHHHHHHHHHHHHHhC
Confidence 89999987 999999998888889877888877532 22344556765432 333 12344444444433 3
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+||++.|.
T Consensus 319 ~ld~vVh~AGv 329 (496)
T 3mje_A 319 PLTAVFHSAGV 329 (496)
T ss_dssp CEEEEEECCCC
T ss_pred CCeEEEECCcc
Confidence 78999998874
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.13 Score=46.17 Aligned_cols=90 Identities=20% Similarity=0.205 Sum_probs=62.3
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||-++..
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~e~~~-----~aDvVi~~vp~ 75 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHLC-------ESVKAALS-----ASPATIFVLLD 75 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEEC-------SSHHHHHH-----HSSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeec-------CCHHHHHh-----cCCEEEEEeCC
Confidence 4689999999999999999999998 89999999999988887775321 12333333 36888888876
Q ss_pred hHHHHHHH-----HHhccCCccEEEeccC
Q 017052 274 TGMITTAL-----QSCCDGWGLAVTLGVP 297 (378)
Q Consensus 274 ~~~~~~~~-----~~l~~~~G~~v~~g~~ 297 (378)
+......+ ..+.++ ..++.++..
T Consensus 76 ~~~~~~v~~~~~l~~~~~g-~ivid~st~ 103 (306)
T 3l6d_A 76 NHATHEVLGMPGVARALAH-RTIVDYTTN 103 (306)
T ss_dssp HHHHHHHHTSTTHHHHTTT-CEEEECCCC
T ss_pred HHHHHHHhcccchhhccCC-CEEEECCCC
Confidence 54444333 234443 455555443
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.72 E-value=0.012 Score=51.35 Aligned_cols=81 Identities=22% Similarity=0.275 Sum_probs=49.4
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhH----HHHHhCCCcE-E--eCCCCCCchHHHHHHHHh-
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKC----EKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~----~~l~~~g~~~-v--i~~~~~~~~~~~~i~~~~- 260 (378)
..++++|||+|+ |++|.++++.+...|+ +|+.++ ++.++. +.+++.+... . .|..+ ..++.+.+.++.
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 87 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD-WDSTKQAFDKVKA 87 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCC-HHHHHHHHHHHHH
Confidence 356889999988 9999999999999999 777766 443332 2333444432 2 23331 223333333332
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|++|.+.|.
T Consensus 88 ~~g~id~lv~~Ag~ 101 (256)
T 3ezl_A 88 EVGEIDVLVNNAGI 101 (256)
T ss_dssp HTCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 2378999999873
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=95.71 E-value=0.056 Score=51.37 Aligned_cols=92 Identities=16% Similarity=0.090 Sum_probs=56.2
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEe--CCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFL--NPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi--~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+++|+|+|+|.+|.++++.+...|. +|++++++.++.+.+.+ ++....+ +.. + . +.+.++.. ++|+|+++
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~--d--~-~~l~~~l~-~~DvVIn~ 75 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVN--D--D-AALDAEVA-KHDLVISL 75 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTT--C--H-HHHHHHHT-TSSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecC--C--H-HHHHHHHc-CCcEEEEC
Confidence 5789999999999999998888898 79999998877665433 3322222 332 2 1 12222222 68999999
Q ss_pred cCChHHHHHHHHHhccCCccEEE
Q 017052 271 IGDTGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~ 293 (378)
++..........++..+ ..+++
T Consensus 76 a~~~~~~~i~~a~l~~g-~~vvd 97 (450)
T 1ff9_A 76 IPYTFHATVIKSAIRQK-KHVVT 97 (450)
T ss_dssp CC--CHHHHHHHHHHHT-CEEEE
T ss_pred CccccchHHHHHHHhCC-CeEEE
Confidence 98532222233445543 34443
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.033 Score=53.53 Aligned_cols=82 Identities=22% Similarity=0.297 Sum_probs=54.5
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHHHhCCCcE-Ee--CCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CEKAKAFGVTE-FL--NPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-------~~~l~~~g~~~-vi--~~~~~~~~~~~~i~~~ 259 (378)
+++++++||+|+ |++|..+++.+...|+.+|+.+.++... .+.+++.|... ++ |.. +..++.+.+...
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~-d~~~v~~~~~~i 301 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVT-DRESVRELLGGI 301 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-CHHHHHHHHHTS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCC-CHHHHHHHHHHH
Confidence 467899999988 9999999988888898568888887642 12345566543 22 333 123344444444
Q ss_pred hC-CCccEEEeccCC
Q 017052 260 TD-GGADYSFECIGD 273 (378)
Q Consensus 260 ~~-~~~d~vid~~g~ 273 (378)
.. +++|+||.+.|.
T Consensus 302 ~~~g~ld~VIh~AG~ 316 (486)
T 2fr1_A 302 GDDVPLSAVFHAAAT 316 (486)
T ss_dssp CTTSCEEEEEECCCC
T ss_pred HhcCCCcEEEECCcc
Confidence 22 278999999873
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=95.70 E-value=0.0049 Score=55.46 Aligned_cols=118 Identities=14% Similarity=0.190 Sum_probs=70.0
Q ss_pred hhhchhhhhhHHHHHhh--------cC-CCCCCeEEEEccC-hHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhCCCc
Q 017052 172 CLLSCGLSAGLGAAWNV--------AD-ISKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKC-EKAKAFGVT 240 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~--------~~-~~~g~~VLI~Gag-~vG~~aiqla~~~g~~~vi~v~~~~~~~-~~l~~~g~~ 240 (378)
..+||....+...+.+. .+ --.|++++|+|+| .+|..+++++...|+ +|+++.++..+. +....++..
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~ 224 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLN 224 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCC
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhh
Confidence 34565555555444332 33 3478999999997 579999999999998 899887763321 122223221
Q ss_pred --EEeCCC-CCCchHHHHHHHHhCCCccEEEeccCChHH-HHHHHHHhccCCccEEEeccCC
Q 017052 241 --EFLNPN-DNNEPVQQVIKRITDGGADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 241 --~vi~~~-~~~~~~~~~i~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
...... .+..++.+.++ .+|+||.++|.+.. +.. ..++++ ..++++|...
T Consensus 225 ~~~~t~~~~t~~~~L~e~l~-----~ADIVIsAtg~p~~vI~~--e~vk~G-avVIDVgi~r 278 (320)
T 1edz_A 225 KHHVEDLGEYSEDLLKKCSL-----DSDVVITGVPSENYKFPT--EYIKEG-AVCINFACTK 278 (320)
T ss_dssp CCEEEEEEECCHHHHHHHHH-----HCSEEEECCCCTTCCBCT--TTSCTT-EEEEECSSSC
T ss_pred cccccccccccHhHHHHHhc-----cCCEEEECCCCCcceeCH--HHcCCC-eEEEEcCCCc
Confidence 010000 00134555555 47999999998643 222 225665 7777887653
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=95.69 E-value=0.036 Score=49.38 Aligned_cols=73 Identities=25% Similarity=0.324 Sum_probs=49.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcC-CCeEEEEcCChhhH--HHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKC--EKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g-~~~vi~v~~~~~~~--~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.++|||+|+ |.+|..+++.+...| . +|+++++++++. +.+...++..+. |.. +. +.+.+... ++|+||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~--d~---~~l~~~~~-~~d~vi 77 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQD--DQ---VIMELALN-GAYATF 77 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTT--CH---HHHHHHHT-TCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCC--CH---HHHHHHHh-cCCEEE
Confidence 478999998 999999998888778 7 899998887654 334445654432 333 22 22333222 689999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.+.
T Consensus 78 ~~a~~ 82 (299)
T 2wm3_A 78 IVTNY 82 (299)
T ss_dssp ECCCH
T ss_pred EeCCC
Confidence 98873
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=95.68 E-value=0.012 Score=50.50 Aligned_cols=102 Identities=15% Similarity=0.168 Sum_probs=67.1
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC--cE--EeCCCCCCchHHHHHHHHhCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--TE--FLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~--~~--vi~~~~~~~~~~~~i~~~~~~ 262 (378)
....++++++||-+|+|. |..+..+|+..|..+|++++.+++..+.+++.-. +. .+..+ ...... ...+ .+
T Consensus 68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d--~~~~~~-~~~~-~~ 142 (230)
T 1fbn_A 68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGD--ANKPQE-YANI-VE 142 (230)
T ss_dssp CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECC--TTCGGG-GTTT-SC
T ss_pred cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECC--CCCccc-cccc-Cc
Confidence 445678899999999876 8888889988774499999999988877755211 11 22111 111000 0011 13
Q ss_pred CccEEEeccCCh----HHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSFECIGDT----GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+|+|+..+..+ ..+..+.+.|+++ |+++..
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 177 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA 177 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence 799998655443 3477888899997 998875
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.084 Score=48.12 Aligned_cols=134 Identities=13% Similarity=0.105 Sum_probs=78.8
Q ss_pred CeEEEEccChHHHHHHHHHH-H-cCCCeEE-EEcCChhhHHH-HHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGLGTVGLSVAQGAK-A-RGASRII-GVDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~-~-~g~~~vi-~v~~~~~~~~~-l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-+|.|+|+|.+|...++.++ . .++ +++ +.++++++.+. ++++|.+.+.. ++.+.+. ..++|+|+.|
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~-~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~~~l~---~~~~D~V~i~ 78 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGV-KLVAACALDSNQLEWAKNELGVETTYT------NYKDMID---TENIDAIFIV 78 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSE-EEEEEECSCHHHHHHHHHTTCCSEEES------CHHHHHT---TSCCSEEEEC
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCc-EEEEEecCCHHHHHHHHHHhCCCcccC------CHHHHhc---CCCCCEEEEe
Confidence 47899999999998888877 4 366 554 55778877754 45678754432 2222221 1279999999
Q ss_pred cCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc----ccc-ccEEEEeeeccCCcCCcHHHHHHHHHcCCCC
Q 017052 271 IGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL----FLS-GRTLKGSLFGGWKPKTDLPSLVNRYLKKEFM 343 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~----~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (378)
+......+.+..++.. |+-|.+..+.. ....-.... -.. ++.+.-.. .......+..+.+++.+|.+-
T Consensus 79 tp~~~h~~~~~~al~~--G~~v~~eKp~~-~~~~~~~~l~~~a~~~~~~~~~~~~--~~r~~p~~~~~~~~i~~g~iG 151 (346)
T 3cea_A 79 APTPFHPEMTIYAMNA--GLNVFCEKPLG-LDFNEVDEMAKVIKSHPNQIFQSGF--MRRYDDSYRYAKKIVDNGDIG 151 (346)
T ss_dssp SCGGGHHHHHHHHHHT--TCEEEECSCCC-SCHHHHHHHHHHHHTCTTSCEECCC--GGGTCHHHHHHHHHHHTTTTC
T ss_pred CChHhHHHHHHHHHHC--CCEEEEcCCCC-CCHHHHHHHHHHHHhCCCCeEEEec--ccccCHHHHHHHHHHHcCCCC
Confidence 9887777778888886 66666643221 111100000 012 33332111 111123577888888888764
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.041 Score=49.11 Aligned_cols=73 Identities=18% Similarity=0.258 Sum_probs=48.3
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC------hhhHHHHH---hCCCcEE-eCCCCCCchHHHHHHHHhCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------PEKCEKAK---AFGVTEF-LNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~------~~~~~~l~---~~g~~~v-i~~~~~~~~~~~~i~~~~~~ 262 (378)
.++|||+|+ |.+|..+++.+...|. +|++++++ +++.+.++ ..++..+ .|.. +. +.+.+...
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~--d~---~~l~~~~~- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID--DH---ASLVEAVK- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTT--CH---HHHHHHHH-
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccC--CH---HHHHHHHc-
Confidence 468999998 9999999999988998 89998886 33443333 3454332 2332 22 12222222
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+||.+++.
T Consensus 77 ~~d~vi~~a~~ 87 (308)
T 1qyc_A 77 NVDVVISTVGS 87 (308)
T ss_dssp TCSEEEECCCG
T ss_pred CCCEEEECCcc
Confidence 68999999875
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.081 Score=46.01 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=30.1
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5799999999999999999999999888888654
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.037 Score=50.08 Aligned_cols=90 Identities=17% Similarity=0.252 Sum_probs=62.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~-~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-.|++|.|+|.|.+|..+++.++..|. +|++.++ +.++ +.++++|+.. . .++.+.+. ..|+|+-+
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~------~~l~ell~-----~aDvVil~ 209 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H------DSLDSLLS-----VSQFFSLN 209 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C------SSHHHHHH-----HCSEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c------CCHHHHHh-----hCCEEEEe
Confidence 367899999999999999999999999 9999998 7665 3455667632 1 12333332 36888877
Q ss_pred cCChH----HH-HHHHHHhccCCccEEEecc
Q 017052 271 IGDTG----MI-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 271 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~ 296 (378)
+..+. .+ ...+..++++ ..+++++.
T Consensus 210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar 239 (320)
T 1gdh_A 210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR 239 (320)
T ss_dssp CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence 76421 12 3456777775 77777764
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.033 Score=50.05 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=68.6
Q ss_pred hhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHH
Q 017052 187 NVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 187 ~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~ 258 (378)
+... ++++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++ .|.. .++..+ ..++ .
T Consensus 110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~-----~ 180 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN--MLDT-----P 180 (312)
T ss_dssp TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TTSC-----C
T ss_pred HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC--hhcC-----C
Confidence 4444 78899999999864 7778888887788 99999999998877765 4432 222221 1111 0
Q ss_pred HhCCCccEEEec-----cCChHHHHHHHHHhccCCccEEEecc
Q 017052 259 ITDGGADYSFEC-----IGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 259 ~~~~~~d~vid~-----~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+..+.||+|+.. .+-...+..+.+.|+++ |+++....
T Consensus 181 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~ 222 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG 222 (312)
T ss_dssp CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 122479999753 22346788899999997 99987753
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.026 Score=48.06 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=65.5
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CC-----Cc--EEeCCCCCCchHHHHHH
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FG-----VT--EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g-----~~--~vi~~~~~~~~~~~~i~ 257 (378)
.++++++||-+|+|. |..+..+++..|. .+|++++.+++..+.+++ .+ .+ .++..+ ....
T Consensus 74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d--~~~~----- 145 (226)
T 1i1n_A 74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD--GRMG----- 145 (226)
T ss_dssp TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC--GGGC-----
T ss_pred hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC--cccC-----
Confidence 378899999999875 7888888888763 289999999988877754 22 11 222221 0000
Q ss_pred HHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
....+.||+|+....-...+..+.+.|+++ |+++..-
T Consensus 146 ~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~ 182 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPV 182 (226)
T ss_dssp CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred cccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence 011237999986655445677888999997 9987753
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.018 Score=50.89 Aligned_cols=100 Identities=15% Similarity=0.080 Sum_probs=67.4
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhC-----CCcE--EeCCCCCCchHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAF-----GVTE--FLNPNDNNEPVQQVI 256 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~~-----g~~~--vi~~~~~~~~~~~~i 256 (378)
.....++++++||-.|+| .|..++.+++.. +. ++++++.+++..+.+++. |.+. ++..+ ..+
T Consensus 103 ~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d--~~~----- 173 (275)
T 1yb2_A 103 IMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD--IAD----- 173 (275)
T ss_dssp ---CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC--TTT-----
T ss_pred HHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc--hhc-----
Confidence 356678899999999886 477778888873 45 999999999988777652 5332 22221 111
Q ss_pred HHHhCCCccEEEeccCCh-HHHHHHHHHhccCCccEEEecc
Q 017052 257 KRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+..+.+|+|+-....+ ..+..+.+.|+++ |+++....
T Consensus 174 -~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~ 212 (275)
T 1yb2_A 174 -FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP 212 (275)
T ss_dssp -CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred -cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence 11223799988654433 5688889999997 99887743
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.028 Score=49.34 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=49.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhCCCcE-Ee--CCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~-v~~~~~~~~~l----~~~g~~~-vi--~~~~~~~~~~~~i~~~~--~ 261 (378)
.++++||+|+ |++|.++++.+...|+ +|+. ..++.++.+.+ ++.+... ++ |..+ ..++.+.+.+.. .
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN-REQCREVLEHEIAQH 102 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHh
Confidence 4678999988 9999999999999999 6644 55665544322 2333332 22 3331 223333333322 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|++|++.|.
T Consensus 103 g~id~li~nAg~ 114 (267)
T 4iiu_A 103 GAWYGVVSNAGI 114 (267)
T ss_dssp CCCSEEEECCCC
T ss_pred CCccEEEECCCC
Confidence 478999998873
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.026 Score=49.61 Aligned_cols=80 Identities=13% Similarity=0.189 Sum_probs=49.8
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHhC-
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~~- 261 (378)
..++++||+|+ |++|.++++.+...|+ +|+.++ ++.++.+.+ +..+... . .|..+ ..+..+.+.+...
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD-FESCERCAEKVLAD 100 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHH
Confidence 35788999988 9999999999999999 788886 554443322 2233322 2 24431 2233333333222
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|++|.+.|.
T Consensus 101 ~g~id~li~nAg~ 113 (269)
T 3gk3_A 101 FGKVDVLINNAGI 113 (269)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 379999999873
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=95.59 E-value=0.028 Score=54.66 Aligned_cols=82 Identities=12% Similarity=0.159 Sum_probs=53.4
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCCh-------------h----hHHHHHhCCCcEE-e--CCCCC
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNP-------------E----KCEKAKAFGVTEF-L--NPNDN 248 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~-------------~----~~~~l~~~g~~~v-i--~~~~~ 248 (378)
+++++++||+|+ |++|..+++.+...|+.+++.+ .++. + ..+.+++.|.... + |.. +
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt-d 326 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT-D 326 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT-S
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC-C
Confidence 567899999987 9999999988888898557777 7762 1 2233445565442 2 333 1
Q ss_pred CchHHHHHHHHhC-CCccEEEeccCC
Q 017052 249 NEPVQQVIKRITD-GGADYSFECIGD 273 (378)
Q Consensus 249 ~~~~~~~i~~~~~-~~~d~vid~~g~ 273 (378)
..++...+.++.. +++|+||.+.|.
T Consensus 327 ~~~v~~~~~~i~~~g~id~vVh~AGv 352 (525)
T 3qp9_A 327 AEAAARLLAGVSDAHPLSAVLHLPPT 352 (525)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence 2334444444432 378999999884
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=95.58 E-value=0.0047 Score=54.46 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=48.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh--CCCccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT--DGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~--~~~~d~vid 269 (378)
.|+++||+|+ |++|.++++.+...|+ +|+.++++.++.+....+ ..|..+ .......+.+.. .+++|++++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~-~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLRE-AAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTS-HHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence 5789999988 9999999999999999 899998876543221111 122221 122222222221 247999999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 101 nAg~ 104 (266)
T 3uxy_A 101 NAGV 104 (266)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8874
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.016 Score=53.18 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=48.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhC----CCcEE-eCCCCCCchHHHHHHHHhCCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----GVTEF-LNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~----g~~~v-i~~~~~~~~~~~~i~~~~~~~~d 265 (378)
.+++|||+|+ |.+|..+++.+...|. +|++++++.++.+.+ +.+ +...+ .|..+ ...+.+.+... ++|
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~---~~d 82 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD-QNKLLESIREF---QPE 82 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC-HHHHHHHHHHH---CCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccC-HHHHHHHHHhc---CCC
Confidence 3678999998 9999999999988998 899998876543322 211 22221 23321 12222222222 689
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
+||.+.+
T Consensus 83 ~vih~A~ 89 (357)
T 1rkx_A 83 IVFHMAA 89 (357)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9999988
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.033 Score=47.97 Aligned_cols=101 Identities=16% Similarity=0.197 Sum_probs=64.9
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh---
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT--- 260 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~--- 260 (378)
...++++||-+|+| .|..++.+|+.+ +. ++++++.+++..+.+++ .|....+... ..+..+.+..+.
T Consensus 67 ~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~ 142 (237)
T 3c3y_A 67 KLVNAKKTIEVGVF-TGYSLLLTALSIPDDG-KITAIDFDREAYEIGLPFIRKAGVEHKINFI--ESDAMLALDNLLQGQ 142 (237)
T ss_dssp HHTTCCEEEEECCT-TSHHHHHHHHHSCTTC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHST
T ss_pred HhhCCCEEEEeCCC-CCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhcc
Confidence 34567899999885 377778888876 45 99999999998877754 4543211111 112333333331
Q ss_pred --CCCccEEEeccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 261 --DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 --~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+.||+||-.... ...++.+.++|+++ |.++.-.
T Consensus 143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~ 181 (237)
T 3c3y_A 143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN 181 (237)
T ss_dssp TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence 3479998843322 34577888999997 9887643
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.027 Score=47.82 Aligned_cols=98 Identities=14% Similarity=0.203 Sum_probs=64.9
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcE---EeCCCCCCchHHHHHHHHh
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~---vi~~~~~~~~~~~~i~~~~ 260 (378)
...++++||-+|+| .|..++.+|+.. +. ++++++.+++..+.+++ .|... ++.. +..+.+..+.
T Consensus 55 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~~~~~~ 127 (223)
T 3duw_A 55 QIQGARNILEIGTL-GGYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVRTG-----LALDSLQQIE 127 (223)
T ss_dssp HHHTCSEEEEECCT-TSHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-----CHHHHHHHHH
T ss_pred HhhCCCEEEEecCC-ccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-----CHHHHHHHHH
Confidence 45578899999886 477888888886 45 99999999988777654 45432 2222 2323333322
Q ss_pred C---CCccEEEeccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 261 D---GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~---~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
. +.||+||-.... ...+..+.+.|+++ |.++.-.
T Consensus 128 ~~~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~ 167 (223)
T 3duw_A 128 NEKYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDN 167 (223)
T ss_dssp HTTCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEES
T ss_pred hcCCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence 1 369998833221 34677888999997 9777653
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=95.55 E-value=0.018 Score=52.42 Aligned_cols=89 Identities=17% Similarity=0.296 Sum_probs=60.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++..+.+..+.+|.... ++.+.+. ..|+|+-++.
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~ell~-----~aDvV~l~~P 209 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQV--------ACSELFA-----SSDFILLALP 209 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEEC--------CHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCceeC--------CHHHHHh-----hCCEEEEcCC
Confidence 57899999999999999999999999 89999988756666666665211 2333332 3577776654
Q ss_pred ChH-----HHHHHHHHhccCCccEEEecc
Q 017052 273 DTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. .....+..|+++ ..+|+++.
T Consensus 210 ~t~~t~~li~~~~l~~mk~g-ailIN~ar 237 (330)
T 4e5n_A 210 LNADTLHLVNAELLALVRPG-ALLVNPCR 237 (330)
T ss_dssp CSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred CCHHHHHHhCHHHHhhCCCC-cEEEECCC
Confidence 211 113556667775 67777654
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.04 Score=47.28 Aligned_cols=101 Identities=17% Similarity=0.232 Sum_probs=66.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhCC-----CcEEeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFG-----VTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~g-----~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
+...+++|++||=+|+|. |..+..+|+..|. .+|++++.+++..+.+++.- ...+. .+..... .. ...
T Consensus 71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~-~d~~~p~---~~-~~~ 144 (233)
T 4df3_A 71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPIL-GDARFPE---KY-RHL 144 (233)
T ss_dssp SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEE-SCTTCGG---GG-TTT
T ss_pred hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEE-EeccCcc---cc-ccc
Confidence 556799999999999863 7788888888764 38999999999887776532 12222 1111110 00 011
Q ss_pred CCCccEEEeccCCh----HHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIGDT----GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+.+|+||-.+.-+ ..+..+.+.|+++ |+++.+
T Consensus 145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~ 181 (233)
T 4df3_A 145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA 181 (233)
T ss_dssp CCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence 23689888544332 3466777889997 998875
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=95.53 E-value=0.067 Score=42.99 Aligned_cols=99 Identities=21% Similarity=0.171 Sum_probs=62.2
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh-CCCccEEE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGGADYSF 268 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~-~~~~d~vi 268 (378)
++++++||-+|+|. |..+..+++..|. .++++++.++ ..+. ....++..+-.+....+.+.... .+.+|+|+
T Consensus 20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~ 93 (180)
T 1ej0_A 20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVVM 93 (180)
T ss_dssp CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence 67899999999876 7888888888632 3899999887 3322 21222322211222222333323 34899998
Q ss_pred e-----ccCC------------hHHHHHHHHHhccCCccEEEecc
Q 017052 269 E-----CIGD------------TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 269 d-----~~g~------------~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
. ..+. ...+..+.+.++++ |+++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 137 (180)
T 1ej0_A 94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVF 137 (180)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 6 2232 25677888899997 99887543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.022 Score=52.34 Aligned_cols=36 Identities=25% Similarity=0.322 Sum_probs=31.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHH--cCCCeEEEEcCChh
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKA--RGASRIIGVDTNPE 229 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~--~g~~~vi~v~~~~~ 229 (378)
.+++|||+|+ |.+|..+++.+.. .|. +|++++++..
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~ 47 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRS 47 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCc
Confidence 5789999988 9999999998888 899 8999988654
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.02 Score=56.74 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=47.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhhHH----HHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT---------NPEKCE----KAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~---------~~~~~~----~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
.|+++||+|+ +++|.++++.+...|+ +|+++++ +.++.+ .+++.+...+.+..+ ..+..+.+.+
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d-~~~~~~~~~~ 95 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS-VIDGAKVIET 95 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCC-GGGHHHHHC-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC-HHHHHHHHHH
Confidence 5789999988 9999999999999999 8888866 443332 334456666666653 2334444443
Q ss_pred HhC--CCccEEEeccCC
Q 017052 259 ITD--GGADYSFECIGD 273 (378)
Q Consensus 259 ~~~--~~~d~vid~~g~ 273 (378)
... +++|++|++.|.
T Consensus 96 ~~~~~g~iDiLVnnAGi 112 (613)
T 3oml_A 96 AIKAFGRVDILVNNAGI 112 (613)
T ss_dssp ---------CEECCCCC
T ss_pred HHHHCCCCcEEEECCCC
Confidence 322 378999999884
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=95.50 E-value=0.029 Score=48.66 Aligned_cols=39 Identities=23% Similarity=0.345 Sum_probs=31.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCE 232 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~ 232 (378)
.++++||+|+ +++|.++++.+...|+ +|+.+ .++.++.+
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~ 46 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAE 46 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHH
Confidence 5789999988 9999999999999999 77664 56555443
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.16 Score=43.39 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=65.0
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.++++.+||-+|+|. |..+..+++. |. ++++++.+++..+.+++. ..++.. +..+.+..+..+.+|+|+-
T Consensus 38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~~-----d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVKS-----DAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEECS-----CHHHHHHTSCTTCBSEEEE
T ss_pred hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceeec-----cHHHHhhhcCCCCeeEEEE
Confidence 357889999998853 5555566665 88 899999999999998876 233322 2333333333458999985
Q ss_pred cc-----CC---hHHHHHHHHHhccCCccEEEec
Q 017052 270 CI-----GD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 270 ~~-----g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.. .. ...+..+.+.|+++ |+++...
T Consensus 108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 140 (240)
T 3dli_A 108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIES 140 (240)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEE
T ss_pred CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEe
Confidence 32 22 25677888999997 9988753
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=95.48 E-value=0.0069 Score=55.14 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=47.6
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHhC------CCc-EE--eCCCCCCchHHHHHHHH
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK----CEKAKAF------GVT-EF--LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~----~~~l~~~------g~~-~v--i~~~~~~~~~~~~i~~~ 259 (378)
+++|||+|+ |++|.+++..+...|+ +|+.+.++.++ .+.++.. +.. .+ .|.. +..++.+.+.+.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~ 79 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR-DSKSVAAARERV 79 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTT-CHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCC-CHHHHHHHHHHH
Confidence 678999998 9999999999999998 56665544322 2222222 122 22 2433 123344444444
Q ss_pred hCCCccEEEeccC
Q 017052 260 TDGGADYSFECIG 272 (378)
Q Consensus 260 ~~~~~d~vid~~g 272 (378)
..+++|++|++.|
T Consensus 80 ~~g~iD~lVnnAG 92 (327)
T 1jtv_A 80 TEGRVDVLVCNAG 92 (327)
T ss_dssp TTSCCSEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 3357999999886
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.027 Score=51.31 Aligned_cols=69 Identities=17% Similarity=0.246 Sum_probs=45.7
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
..+++|||+|+ |.+|..+++.+...|. +|+++++++++ .+...+ .|.. +.+ .+.++.. ++|+||.
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------~~~~~~~~Dl~--d~~---~~~~~~~-~~d~vih 83 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------TGGEEVVGSLE--DGQ---ALSDAIM-GVSAVLH 83 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------SCCSEEESCTT--CHH---HHHHHHT-TCSEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------CCccEEecCcC--CHH---HHHHHHh-CCCEEEE
Confidence 45789999998 9999999999999998 89999887765 233332 2333 222 2222222 7899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.+.
T Consensus 84 ~A~~ 87 (347)
T 4id9_A 84 LGAF 87 (347)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8763
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=95.45 E-value=0.016 Score=52.58 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=47.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.+|||+|+ |.+|..+++.+...|. +|++++++.++.+.+...+...+ .|.. +. +.+.++.. ++|+||.+.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~--d~---~~~~~~~~-~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEML--DH---AGLERALR-GLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTT--CH---HHHHHHTT-TCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCC--CH---HHHHHHHc-CCCEEEECCc
Confidence 47999998 9999999999988998 89999988766544433344332 2332 22 23333332 6899999987
Q ss_pred C
Q 017052 273 D 273 (378)
Q Consensus 273 ~ 273 (378)
.
T Consensus 87 ~ 87 (342)
T 2x4g_A 87 Y 87 (342)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=95.44 E-value=0.04 Score=49.55 Aligned_cols=92 Identities=9% Similarity=0.075 Sum_probs=57.2
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh------hhHHHH---HhCCCcEE-eCCCCCCchHHHHHHHHhCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP------EKCEKA---KAFGVTEF-LNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~------~~~~~l---~~~g~~~v-i~~~~~~~~~~~~i~~~~~~ 262 (378)
.++|||+|+ |.+|..+++.+...|. +|++++++. ++.+.+ ...++..+ .|.. +. +.+.+...
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~--d~---~~l~~a~~- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEME--EH---EKMVSVLK- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTT--CH---HHHHHHHT-
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCC--CH---HHHHHHHc-
Confidence 467999998 9999999999888898 888888875 344433 23455433 2443 22 22333322
Q ss_pred CccEEEeccCCh--HHHHHHHHHhccC--CccEE
Q 017052 263 GADYSFECIGDT--GMITTALQSCCDG--WGLAV 292 (378)
Q Consensus 263 ~~d~vid~~g~~--~~~~~~~~~l~~~--~G~~v 292 (378)
++|+||.+++.. .....+++.+... -+++|
T Consensus 77 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 77 QVDIVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp TCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred CCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 589999998753 1223444444432 14676
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.44 E-value=0.075 Score=47.44 Aligned_cols=92 Identities=12% Similarity=0.096 Sum_probs=57.4
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHHH---hCCCcEE-eCCCCCCchHHHHHHHHhCCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-----PEKCEKAK---AFGVTEF-LNPNDNNEPVQQVIKRITDGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~-----~~~~~~l~---~~g~~~v-i~~~~~~~~~~~~i~~~~~~~ 263 (378)
.++|||+|+ |.+|..+++.+...|. +|++++++ +++.+.++ ..++..+ .|.. +. +.+.+... +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~--d~---~~l~~~~~-~ 76 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD--DH---QRLVDALK-Q 76 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSS--CH---HHHHHHHT-T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCC--CH---HHHHHHHh-C
Confidence 467999998 9999999999988898 89999887 44544443 2344332 1332 22 22333322 6
Q ss_pred ccEEEeccCCh------HHHHHHHHHhccC--CccEE
Q 017052 264 ADYSFECIGDT------GMITTALQSCCDG--WGLAV 292 (378)
Q Consensus 264 ~d~vid~~g~~------~~~~~~~~~l~~~--~G~~v 292 (378)
+|+||.+++.. .....+++.+... -.++|
T Consensus 77 ~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 77 VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred CCEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 99999988742 1233445555443 14676
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.42 E-value=0.043 Score=54.30 Aligned_cols=79 Identities=16% Similarity=0.175 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHH----HHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCE----KAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~---------~~~~----~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
.|+++||+|+ +++|++.++.+...|+ +|++.+++. ++.+ .+++.|...+.+..+ ..+..+.+.+
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d-~~~~~~~v~~ 84 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNN-VLDGDKIVET 84 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCC-TTCHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCC-HHHHHHHHHH
Confidence 5788999998 8999999999999999 888887653 3322 233446555555543 2222222332
Q ss_pred Hh--CCCccEEEeccCC
Q 017052 259 IT--DGGADYSFECIGD 273 (378)
Q Consensus 259 ~~--~~~~d~vid~~g~ 273 (378)
.. .|++|+++++.|.
T Consensus 85 ~~~~~G~iDiLVnNAGi 101 (604)
T 2et6_A 85 AVKNFGTVHVIINNAGI 101 (604)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 2479999999883
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.026 Score=47.94 Aligned_cols=102 Identities=17% Similarity=0.180 Sum_probs=65.6
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhC---
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD--- 261 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~--- 261 (378)
...++++||-+|+|. |..++.+|+.++ ..+|++++.+++..+.+++ .|....+.+. ..+..+.+..+..
T Consensus 61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~~ 137 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLR--LSPAKDTLAELIHAGQ 137 (225)
T ss_dssp HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHTTTC
T ss_pred HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eCCHHHHHHHhhhccC
Confidence 445788999999864 778888888763 3399999999988877655 3543211111 1123333333332
Q ss_pred -CCccEEEeccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 262 -GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 -~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.||+|+-.... ...+..+.+.|+++ |.++...
T Consensus 138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~ 174 (225)
T 3tr6_A 138 AWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDN 174 (225)
T ss_dssp TTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence 479998833222 24577888999997 9988653
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.03 Score=48.86 Aligned_cols=67 Identities=21% Similarity=0.284 Sum_probs=48.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.+ +++|+|+|++|.+++..+...|+++|+++.++.++.+.+.+ ++. ..+ .++.+.+. .+|+||+++
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~----~~~~~~~~-----~aDiVInat 174 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL----DQLDEVVK-----KAKSLFNTT 174 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG----GGHHHHHH-----TCSEEEECS
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH----HHHHhhhc-----CCCEEEECC
Confidence 56 99999999999999999999998789999999887665432 221 222 22322222 589999988
Q ss_pred C
Q 017052 272 G 272 (378)
Q Consensus 272 g 272 (378)
.
T Consensus 175 p 175 (253)
T 3u62_A 175 S 175 (253)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=95.41 E-value=0.15 Score=44.01 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=52.1
Q ss_pred eEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
+|.|+|+ |.+|+.+++.+... +. +++++....+..+.+...+++.+++++. .....+.+......+.++|+-++|-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~-elva~~d~~~dl~~~~~~~~DvvIDfT~-p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDL-TLSAELDAGDPLSLLTDGNTEVVIDFTH-PDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTC-EEEEEECTTCCTHHHHHTTCCEEEECSC-TTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEccCCCHHHHhccCCcEEEEccC-hHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 6889998 99999999998766 77 6765544333333333346888888873 3344444444344488999988875
Q ss_pred hH
Q 017052 274 TG 275 (378)
Q Consensus 274 ~~ 275 (378)
.+
T Consensus 80 ~~ 81 (245)
T 1p9l_A 80 TA 81 (245)
T ss_dssp CH
T ss_pred CH
Confidence 44
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.014 Score=53.00 Aligned_cols=75 Identities=19% Similarity=0.335 Sum_probs=46.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhCCCcEEe--CCCCCCchHHHHHHHHhCC-CccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDG-GADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-~~~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~~-~~d~v 267 (378)
.+.+|||+|+ |.+|..+++.+...|. +|++++++... .+.++.+..-.++ |.. +.+ .+.++..+ .+|+|
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~--d~~---~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGD-KVVGIDNFATGRREHLKDHPNLTFVEGSIA--DHA---LVNQLIGDLQPDAV 93 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCGGGSCCCTTEEEEECCTT--CHH---HHHHHHHHHCCSEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCCccchhhHhhcCCceEEEEeCC--CHH---HHHHHHhccCCcEE
Confidence 4678999998 9999999998888898 89999886532 2222222111222 332 222 22222222 68999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
|.+.+.
T Consensus 94 ih~A~~ 99 (333)
T 2q1w_A 94 VHTAAS 99 (333)
T ss_dssp EECCCC
T ss_pred EECcee
Confidence 998874
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.41 E-value=0.037 Score=50.91 Aligned_cols=36 Identities=19% Similarity=0.331 Sum_probs=28.7
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
+++|||+|+ |.+|..+++.+...|. +|++++++.++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 37 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASS 37 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC----
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 368999998 9999999998888898 89999887654
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=95.40 E-value=0.17 Score=44.96 Aligned_cols=87 Identities=22% Similarity=0.377 Sum_probs=59.2
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|... . .+..+.+. ..|+||-|+..+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~D~vi~~vp~~ 71 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---C----ENNQKVAA-----ASDIIFTSLPNA 71 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---C----SSHHHHHH-----HCSEEEECCSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----CCCEEEEECCCH
Confidence 479999999999999988888898 8999999999888887766431 1 12223332 368999888654
Q ss_pred HHHHHHH-------HHhccCCccEEEec
Q 017052 275 GMITTAL-------QSCCDGWGLAVTLG 295 (378)
Q Consensus 275 ~~~~~~~-------~~l~~~~G~~v~~g 295 (378)
..+...+ ..+.++ ..++.++
T Consensus 72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~ 98 (301)
T 3cky_A 72 GIVETVMNGPGGVLSACKAG-TVIVDMS 98 (301)
T ss_dssp HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence 4444443 345553 4455543
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.16 Score=44.70 Aligned_cols=90 Identities=22% Similarity=0.317 Sum_probs=60.4
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhCC-CccEEEecc
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDG-GADYSFECI 271 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~ 271 (378)
.+|.|+|+|.+|.++++.++..|.. +|++.++++++.+.++++|... ... + ..+.+ . ..|+||.|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~----~--~~~~~-----~~~aDvVilav 70 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT----S--IAKVE-----DFSPDFVMLSS 70 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES----C--GGGGG-----GTCCSEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccC----C--HHHHh-----cCCCCEEEEcC
Confidence 3789999999999999999888752 6999999999998888888642 221 1 11111 2 579999998
Q ss_pred CChHH---HHHHHHHhccCCccEEEecc
Q 017052 272 GDTGM---ITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 272 g~~~~---~~~~~~~l~~~~G~~v~~g~ 296 (378)
..... +......++++ ..++.++.
T Consensus 71 p~~~~~~v~~~l~~~l~~~-~iv~~~~~ 97 (281)
T 2g5c_A 71 PVRTFREIAKKLSYILSED-ATVTDQGS 97 (281)
T ss_dssp CHHHHHHHHHHHHHHSCTT-CEEEECCS
T ss_pred CHHHHHHHHHHHHhhCCCC-cEEEECCC
Confidence 76432 22333455654 55555543
|
| >3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A | Back alignment and structure |
|---|
Probab=95.34 E-value=0.098 Score=46.07 Aligned_cols=103 Identities=15% Similarity=0.177 Sum_probs=63.1
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHH--h
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI--T 260 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~--~ 260 (378)
..++++|++||=.|+|. |..++.+|+.+ +..+|++++.++++.+.+++ +|...+.... .+..+....+ .
T Consensus 78 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~---~D~~~~~~~~~~~ 153 (274)
T 3ajd_A 78 VLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN---ADMRKYKDYLLKN 153 (274)
T ss_dssp HHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCHHHHHHHHHHT
T ss_pred HhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe---CChHhcchhhhhc
Confidence 34678899998887753 55566667654 43499999999998877654 5653321111 1222211111 1
Q ss_pred CCCccEEE-e--ccCC---------------------hHHHHHHHHHhccCCccEEEec
Q 017052 261 DGGADYSF-E--CIGD---------------------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~~~~d~vi-d--~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+.||+|+ | |.|. ...+..+++.++++ |+++...
T Consensus 154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~st 211 (274)
T 3ajd_A 154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYST 211 (274)
T ss_dssp TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEE
Confidence 34799877 4 3331 24577788899997 9988753
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=95.34 E-value=0.047 Score=51.25 Aligned_cols=83 Identities=27% Similarity=0.288 Sum_probs=51.3
Q ss_pred cCCCCCCeEEEEcc-ChHHHH--HHHHHHHcCCCeEEEEcCChhh----------------HHHHHhCCCcEE---eCCC
Q 017052 189 ADISKGSTVVIFGL-GTVGLS--VAQGAKARGASRIIGVDTNPEK----------------CEKAKAFGVTEF---LNPN 246 (378)
Q Consensus 189 ~~~~~g~~VLI~Ga-g~vG~~--aiqla~~~g~~~vi~v~~~~~~----------------~~~l~~~g~~~v---i~~~ 246 (378)
..+..|+++||+|+ +++|++ .+......|+ +|+.+.++.+. .+.+++.|.... .|..
T Consensus 55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt 133 (418)
T 4eue_A 55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF 133 (418)
T ss_dssp CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence 34577999999998 899998 4444445599 88888775322 223455665432 2433
Q ss_pred CCCchHHHHHHHHhC--CCccEEEeccCC
Q 017052 247 DNNEPVQQVIKRITD--GGADYSFECIGD 273 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~--~~~d~vid~~g~ 273 (378)
+ ..+..+.+.++.. +++|+++++.|.
T Consensus 134 d-~~~v~~~v~~i~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 134 S-NETKDKVIKYIKDEFGKIDLFVYSLAA 161 (418)
T ss_dssp C-HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred C-HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 1 2333333443322 479999998875
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=95.33 E-value=0.031 Score=49.56 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=62.8
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-----C---------CcEEeCCCCCCchHHHHHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-----G---------VTEFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-----g---------~~~vi~~~~~~~~~~~~i~ 257 (378)
..+++||++|+|. |..+..+++. +..++++++.+++..+.+++. + .+.+-.. ..+..+.+.
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~---~~D~~~~l~ 148 (281)
T 1mjf_A 74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT---IGDGFEFIK 148 (281)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE---ESCHHHHHH
T ss_pred CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE---ECchHHHhc
Confidence 4678999998753 6666777777 666999999999998888763 1 1111111 112333333
Q ss_pred HHhCCCccEEE-eccC---------ChHHHHHHHHHhccCCccEEEe
Q 017052 258 RITDGGADYSF-ECIG---------DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 258 ~~~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
. .+.+|+|+ |... ..+.+..+.+.|+++ |.++..
T Consensus 149 ~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~ 192 (281)
T 1mjf_A 149 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ 192 (281)
T ss_dssp H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence 3 45899887 4431 135678888999997 998875
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=95.29 E-value=0.055 Score=51.49 Aligned_cols=79 Identities=22% Similarity=0.372 Sum_probs=52.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhH---HHHHhCCCcEE-eCCCCCCchHHHHHHHHh--CC-Cc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC---EKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DG-GA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~---~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~--~~-~~ 264 (378)
+++++||+|+ |++|.++++.+...|+ +|+.++++.... +..++++...+ .|..+ ..+....+.+.. .+ .+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~~~~~g~~i 289 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDVTA-DDAVDKITAHVTEHHGGKV 289 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCTTS-TTHHHHHHHHHHHHSTTCC
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHHcCCCc
Confidence 5789999987 9999999998888899 888888764332 23344555432 34432 334444443332 23 49
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|++|++.|.
T Consensus 290 d~lV~nAGv 298 (454)
T 3u0b_A 290 DILVNNAGI 298 (454)
T ss_dssp SEEEECCCC
T ss_pred eEEEECCcc
Confidence 999999874
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.012 Score=52.18 Aligned_cols=71 Identities=7% Similarity=0.054 Sum_probs=49.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.+++++|+|+|++|.+++..+...|+++|+++.++.++.+.+.. .. ... .+. .+.+.. ..+|+||+++
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~-~~~-------~~~-~~~~~~-~~aDiVInaT 183 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NI-NKI-------NLS-HAESHL-DEFDIIINTT 183 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CC-EEE-------CHH-HHHHTG-GGCSEEEECC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hc-ccc-------cHh-hHHHHh-cCCCEEEECc
Confidence 368899999999999999999999998789999999887654432 11 111 121 122211 2689999998
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
+.
T Consensus 184 p~ 185 (277)
T 3don_A 184 PA 185 (277)
T ss_dssp C-
T ss_pred cC
Confidence 64
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=95.28 E-value=0.014 Score=52.93 Aligned_cols=76 Identities=11% Similarity=0.127 Sum_probs=48.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCcEEe--CCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
.+.+|||+|+ |.+|..+++.+...|. +|++++++..... .++.+..-.++ |..+ ...+.+.+.+. ++|+||
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d-~~~~~~~~~~~---~~D~vi 93 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPVAGLSVIEGSVTD-AGLLERAFDSF---KPTHVV 93 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSCTTEEEEECCTTC-HHHHHHHHHHH---CCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhccCCceEEEeeCCC-HHHHHHHHhhc---CCCEEE
Confidence 4679999998 9999999999988898 8999988644321 11222211222 3321 22233333322 789999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
.+.+.
T Consensus 94 h~A~~ 98 (330)
T 2pzm_A 94 HSAAA 98 (330)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99873
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.059 Score=49.54 Aligned_cols=87 Identities=23% Similarity=0.277 Sum_probs=57.2
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++. +.+.+...|+.. .++.+.+. ..|+|+-++.
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~--------~~l~ell~-----~aDvV~l~~P 239 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP--------ASLEDVLT-----KSDFIFVVAA 239 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE--------CCHHHHHH-----SCSEEEECSC
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee--------CCHHHHHh-----cCCEEEEcCc
Confidence 48899999999999999999999999 999998875 444455566531 12222222 3577665543
Q ss_pred ChH-----HHHHHHHHhccCCccEEEec
Q 017052 273 DTG-----MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~~-----~~~~~~~~l~~~~G~~v~~g 295 (378)
.+. .-...+..|+++ +.+|+++
T Consensus 240 lt~~T~~li~~~~l~~mk~g-ailIN~a 266 (365)
T 4hy3_A 240 VTSENKRFLGAEAFSSMRRG-AAFILLS 266 (365)
T ss_dssp SSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred CCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence 211 113455666665 6666665
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=95.24 E-value=0.11 Score=51.21 Aligned_cols=79 Identities=23% Similarity=0.287 Sum_probs=50.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhCCCcEEeCCCCCC-chHHHHHHHHh--CCCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAFGVTEFLNPNDNN-EPVQQVIKRIT--DGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~~~~~l~~~g~~~vi~~~~~~-~~~~~~i~~~~--~~~~d~ 266 (378)
.|+++||+|+ +++|++.++.+...|+ +|++.++.+ +-.+.+++.|...+...-+ . .+..+.+.+.. .|++|+
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~D-v~~~~~~~~~~~~~~~G~iDi 398 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDATKTVDEIKAAGGEAWPDQHD-VAKDSEAIIKNVIDKYGTIDI 398 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHHTTCEEEEECCC-HHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHHHHHHHHHhcCCeEEEEEcC-hHHHHHHHHHHHHHhcCCCCE
Confidence 4788999998 8999999999999999 888886432 2234445556544332221 1 12222222221 247999
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
++++.|.
T Consensus 399 LVnNAGi 405 (604)
T 2et6_A 399 LVNNAGI 405 (604)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999873
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.23 E-value=0.029 Score=47.84 Aligned_cols=100 Identities=15% Similarity=0.173 Sum_probs=67.1
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHhC
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
.....+.++++||-+|+|. |..+..+++.. . ++++++.+++..+.+++. +.-.++..+ ... .+ ...
T Consensus 63 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d--~~~---~~--~~~ 132 (231)
T 1vbf_A 63 LDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD--GTL---GY--EEE 132 (231)
T ss_dssp HHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC--GGG---CC--GGG
T ss_pred HHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECC--ccc---cc--ccC
Confidence 3556788999999999875 77888888774 5 999999999988888763 211222221 111 00 012
Q ss_pred CCccEEEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 262 GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 262 ~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+.+|+|+....-......+.+.|+++ |+++..-.
T Consensus 133 ~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~ 166 (231)
T 1vbf_A 133 KPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG 166 (231)
T ss_dssp CCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred CCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 47999886544333446788899997 99887643
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.22 E-value=0.018 Score=49.46 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=47.3
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh-CCCccEEEecc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGGADYSFECI 271 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~-~~~~d~vid~~ 271 (378)
++++||+|+ |.+|..+++.+...|+ +|++++++++ ++++ .....|..+ ..++.+.+.+.. .+++|+++.+.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~----~~~~-~~~~~D~~~-~~~~~~~~~~~~~~~~~d~li~~a 74 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE----GEDL-IYVEGDVTR-EEDVRRAVARAQEEAPLFAVVSAA 74 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC----SSSS-EEEECCTTC-HHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc----ccce-EEEeCCCCC-HHHHHHHHHHHHhhCCceEEEEcc
Confidence 578999998 9999999998888899 8999888765 1111 011223331 233333333331 13789999887
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
|.
T Consensus 75 g~ 76 (242)
T 1uay_A 75 GV 76 (242)
T ss_dssp CC
T ss_pred cc
Confidence 63
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.05 Score=48.89 Aligned_cols=91 Identities=13% Similarity=0.114 Sum_probs=56.9
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHH---HhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCEKA---KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-~~~~l---~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
++|||+|+ |.+|..+++.+...|. +|++++++.+ +.+.+ +..++..+ .|.. +. +.+.+... ++|+||
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~--d~---~~l~~a~~-~~d~vi 84 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNSSKTTLLDEFQSLGAIIVKGELD--EH---EKLVELMK-KVDVVI 84 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTCSCHHHHHHHHHTTCEEEECCTT--CH---HHHHHHHT-TCSEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCCchhhHHHHhhcCCCEEEEecCC--CH---HHHHHHHc-CCCEEE
Confidence 57999998 9999999999988898 8989888764 44333 34455443 2333 22 22333322 689999
Q ss_pred eccCCh--HHHHHHHHHhccC--CccEE
Q 017052 269 ECIGDT--GMITTALQSCCDG--WGLAV 292 (378)
Q Consensus 269 d~~g~~--~~~~~~~~~l~~~--~G~~v 292 (378)
.+++.. .....+++.+... -.+++
T Consensus 85 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 85 SALAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp ECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred ECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 998742 1223444444332 14666
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=95.20 E-value=0.03 Score=48.99 Aligned_cols=79 Identities=23% Similarity=0.372 Sum_probs=49.4
Q ss_pred CCCeEEEEccC---hHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHH----hCCCcEE---eCCCCCCchHHHHHHHHh
Q 017052 193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKC--EKAK----AFGVTEF---LNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 193 ~g~~VLI~Gag---~vG~~aiqla~~~g~~~vi~v~~~~~~~--~~l~----~~g~~~v---i~~~~~~~~~~~~i~~~~ 260 (378)
.++++||+|++ ++|.++++.+...|+ +|+.+.++.++. +.++ ..+.... .|.. +..++.+.+.+..
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD-SYESCEKLVKDVV 96 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTT-CHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCC-CHHHHHHHHHHHH
Confidence 57899999764 899999999989999 888887764332 2222 2344332 2332 1223333333332
Q ss_pred --CCCccEEEeccCC
Q 017052 261 --DGGADYSFECIGD 273 (378)
Q Consensus 261 --~~~~d~vid~~g~ 273 (378)
.+++|++|++.|.
T Consensus 97 ~~~g~id~li~nAg~ 111 (267)
T 3gdg_A 97 ADFGQIDAFIANAGA 111 (267)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 2478999999873
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.2 Score=46.02 Aligned_cols=71 Identities=11% Similarity=0.243 Sum_probs=52.0
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
..+|.|+|.|.+|..++..+...|. +|++.++++++.+.+.+.|+.. ..+..+.+... ...|+||-++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~-------~~s~~e~~~~a--~~~DvVi~~vp~ 91 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG-------ARSIEEFCAKL--VKPRVVWLMVPA 91 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC-------CSSHHHHHHHS--CSSCEEEECSCG
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE-------eCCHHHHHhcC--CCCCEEEEeCCH
Confidence 4689999999999999999999998 9999999999998888776531 11233333321 134777777765
Q ss_pred h
Q 017052 274 T 274 (378)
Q Consensus 274 ~ 274 (378)
.
T Consensus 92 ~ 92 (358)
T 4e21_A 92 A 92 (358)
T ss_dssp G
T ss_pred H
Confidence 4
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.19 E-value=0.14 Score=46.69 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=62.0
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
.+|.|+|.|.+|.+++..++..|. +|++.++++++.+.++++|+.... +..+.+.+. ....|+||-++..
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~~-------~~~e~~~~a-~~~aDlVilavP~- 78 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVSA-------DLEATLQRA-AAEDALIVLAVPM- 78 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEES-------CHHHHHHHH-HHTTCEEEECSCH-
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeeeC-------CHHHHHHhc-ccCCCEEEEeCCH-
Confidence 579999999999999999999998 899999999999999999874321 222333221 0146899988874
Q ss_pred HHHHHHHH---HhccCCccEEEecc
Q 017052 275 GMITTALQ---SCCDGWGLAVTLGV 296 (378)
Q Consensus 275 ~~~~~~~~---~l~~~~G~~v~~g~ 296 (378)
..+...+. .+.++ ..+++++.
T Consensus 79 ~~~~~vl~~l~~~~~~-~iv~Dv~S 102 (341)
T 3ktd_A 79 TAIDSLLDAVHTHAPN-NGFTDVVS 102 (341)
T ss_dssp HHHHHHHHHHHHHCTT-CCEEECCS
T ss_pred HHHHHHHHHHHccCCC-CEEEEcCC
Confidence 33333222 23443 55555654
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.15 E-value=0.098 Score=46.31 Aligned_cols=41 Identities=24% Similarity=0.417 Sum_probs=36.7
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
++|.|+|+|.+|...++.+...|. +|+..++++++.+.+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~ 45 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK 45 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence 589999999999999999999999 99999999988776654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.14 E-value=0.055 Score=45.13 Aligned_cols=73 Identities=16% Similarity=0.256 Sum_probs=47.0
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCC-chHHHHHHHHhCCCccEEEecc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNN-EPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~-~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+++||+|+ |.+|..+++.+... +|+++++++++.+.+.+ ++. ..+..+-.+ .++.+.+.+ .+++|++|.+.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~a 74 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAV 74 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECC
Confidence 46899998 99999888766554 79999998877665533 333 333222112 223333333 24799999998
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
|.
T Consensus 75 g~ 76 (207)
T 2yut_A 75 GK 76 (207)
T ss_dssp CC
T ss_pred Cc
Confidence 73
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=95.12 E-value=0.08 Score=48.15 Aligned_cols=87 Identities=17% Similarity=0.148 Sum_probs=61.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.++. ++++ +. + ..++.+.+. ..|+|+.++.
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~---~~~l~ell~-----~aDvV~l~~p 208 (333)
T 1j4a_A 145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY----Y---VDSLDDLYK-----QADVISLHVP 208 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC----B---CSCHHHHHH-----HCSEEEECSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce----e---cCCHHHHHh-----hCCEEEEcCC
Confidence 47899999999999999999999999 899998877654 2333 21 1 112333333 4689998876
Q ss_pred ChHH----H-HHHHHHhccCCccEEEecc
Q 017052 273 DTGM----I-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~~----~-~~~~~~l~~~~G~~v~~g~ 296 (378)
.+.. + ...+..|+++ +.++.++.
T Consensus 209 ~~~~t~~li~~~~l~~mk~g-a~lIn~ar 236 (333)
T 1j4a_A 209 DVPANVHMINDESIAKMKQD-VVIVNVSR 236 (333)
T ss_dssp CCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred CcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence 4321 1 3567788886 88888865
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=95.06 E-value=0.21 Score=44.32 Aligned_cols=74 Identities=22% Similarity=0.270 Sum_probs=52.7
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChH
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 275 (378)
+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|... . .+..+.+. ..|+||-|+..+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~Dvvi~~vp~~~ 68 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---V----SSPADVAE-----KADRIITMLPTSI 68 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---C----SSHHHHHH-----HCSEEEECCSSHH
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---c----CCHHHHHh-----cCCEEEEeCCCHH
Confidence 58899999999999998888898 8999999999988888776432 1 12222232 3688888876544
Q ss_pred HHHHHHH
Q 017052 276 MITTALQ 282 (378)
Q Consensus 276 ~~~~~~~ 282 (378)
.....+.
T Consensus 69 ~~~~v~~ 75 (296)
T 2gf2_A 69 NAIEAYS 75 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 4454443
|
| >1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 | Back alignment and structure |
|---|
Probab=95.02 E-value=0.065 Score=46.56 Aligned_cols=99 Identities=17% Similarity=0.235 Sum_probs=66.0
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcE--EeCCCCCCchHHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE--FLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~--vi~~~~~~~~~~~~i~~~ 259 (378)
.......++.+||-+|+| .|..+..+++.. . ++++++.+++..+.+++. +... ++..+ ..++ .+
T Consensus 30 ~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d--~~~l-----~~ 99 (260)
T 1vl5_A 30 MQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGD--AEQM-----PF 99 (260)
T ss_dssp HHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC--C-CC-----CS
T ss_pred HHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEec--HHhC-----CC
Confidence 345567889999999986 477777777654 4 999999999888777652 3322 22221 1111 01
Q ss_pred hCCCccEEEeccCC------hHHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSFECIGD------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.++.||+|+....- ...+.++.+.|+++ |+++...
T Consensus 100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~ 140 (260)
T 1vl5_A 100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD 140 (260)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence 22379999965332 35688899999997 9988764
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=95.02 E-value=0.091 Score=46.63 Aligned_cols=96 Identities=11% Similarity=0.099 Sum_probs=66.0
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHHHhCC
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.+.++.+||-+|+| .|..+..+++..|. ++++++.++...+.+++ .|.. .++..+-.+.. +..+
T Consensus 79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~ 149 (297)
T 2o57_A 79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-------CEDN 149 (297)
T ss_dssp CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-------SCTT
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-------CCCC
Confidence 78899999999986 57788888888788 99999999988776654 2321 22222100111 1123
Q ss_pred CccEEEeccCC------hHHHHHHHHHhccCCccEEEec
Q 017052 263 GADYSFECIGD------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 263 ~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+|+|+....- ...+..+.+.|+++ |+++...
T Consensus 150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 187 (297)
T 2o57_A 150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITD 187 (297)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 78998854321 35678889999997 9988774
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=95.01 E-value=0.018 Score=50.63 Aligned_cols=70 Identities=11% Similarity=0.088 Sum_probs=47.2
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+++|||+|+ |.+|..+++.+...|+ +|+++++++.+.+ ..+...+ .|.. +.+ .+.++.. ++|+||++.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~---~~~~~~~~~Dl~--d~~---~~~~~~~-~~D~vi~~A 72 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA---GPNEECVQCDLA--DAN---AVNAMVA-GCDGIVHLG 72 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC---CTTEEEEECCTT--CHH---HHHHHHT-TCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc---CCCCEEEEcCCC--CHH---HHHHHHc-CCCEEEECC
Confidence 468999998 9999999999988898 8999988876543 1122111 2332 222 2333322 689999998
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
|.
T Consensus 73 g~ 74 (267)
T 3rft_A 73 GI 74 (267)
T ss_dssp SC
T ss_pred CC
Confidence 74
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=95.00 E-value=0.067 Score=48.91 Aligned_cols=89 Identities=26% Similarity=0.333 Sum_probs=57.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.++. ..+.+|+..+ .++.+.+. ..|+|+-++.
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~-------~~l~ell~-----~aDvV~l~~P 232 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV-------STLQDLLF-----HSDCVTLHCG 232 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC-------SSHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCeec-------CCHHHHHh-----cCCEEEEcCC
Confidence 57899999999999999999999999 899998765542 3344565321 12222222 3577776654
Q ss_pred ChH----HH-HHHHHHhccCCccEEEecc
Q 017052 273 DTG----MI-TTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~----~~-~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. .+ ...+..|+++ ..++.++.
T Consensus 233 ~t~~t~~li~~~~l~~mk~g-ailIN~ar 260 (347)
T 1mx3_A 233 LNEHNHHLINDFTVKQMRQG-AFLVNTAR 260 (347)
T ss_dssp CCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred CCHHHHHHhHHHHHhcCCCC-CEEEECCC
Confidence 321 12 3455666664 66666654
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.017 Score=53.25 Aligned_cols=117 Identities=17% Similarity=0.193 Sum_probs=72.8
Q ss_pred hhhhhhchhhhhhHHHHHhhcCC-CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh----h--------hHHHHH
Q 017052 169 EKICLLSCGLSAGLGAAWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP----E--------KCEKAK 235 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~-~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~----~--------~~~~l~ 235 (378)
++.......++.-+.++ +..+. -+..+|+|+|+|..|..+++++..+|+++|+.++++- . +..+++
T Consensus 163 DiqGTa~V~lAall~al-~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~ 241 (398)
T 2a9f_A 163 DQHGTAIVVLAAIFNSL-KLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAK 241 (398)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHH
T ss_pred hhhhHHHHHHHHHHHHH-HHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhh
Confidence 33333333333444444 34333 3457899999999999999999999998999998862 1 112222
Q ss_pred hCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCC
Q 017052 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 236 ~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.. +.......+.+.++ ++|++|-+++....-++.++.|+++ ..++.+..+.
T Consensus 242 ~~------~~~~~~~~L~eav~-----~ADV~IG~Sapgl~T~EmVk~Ma~~-pIIfalsNPt 292 (398)
T 2a9f_A 242 VT------NREFKSGTLEDALE-----GADIFIGVSAPGVLKAEWISKMAAR-PVIFAMANPI 292 (398)
T ss_dssp HH------SCTTCCCSCSHHHH-----TTCSEEECCSTTCCCHHHHHTSCSS-CEEEECCSSS
T ss_pred cc------CcccchhhHHHHhc-----cCCEEEecCCCCCCCHHHHHhhCCC-CEEEECCCCC
Confidence 11 10001223444444 4699998877434556788999986 8888887654
|
| >1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36 | Back alignment and structure |
|---|
Probab=94.98 E-value=0.15 Score=42.48 Aligned_cols=96 Identities=9% Similarity=0.077 Sum_probs=62.1
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CC---------------c--EEe--CCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GV---------------T--EFL--NPN 246 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~---------------~--~vi--~~~ 246 (378)
....+.++.+||..|+|. |..+..+|+. |. +|++++.+++-.+.+++. +. . .++ +..
T Consensus 16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 444677899999998863 6777778876 88 999999999988888653 11 1 121 222
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCC--------hHHHHHHHHHhccCCccEEEe
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~ 294 (378)
+..+.. .+.||+|++...- ...+.++.+.|+++ |+++.+
T Consensus 93 --~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~ 139 (203)
T 1pjz_A 93 --ALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI 139 (203)
T ss_dssp --SSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred --cCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 111110 1269999964221 12467788899997 984433
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=94.97 E-value=0.056 Score=49.21 Aligned_cols=99 Identities=16% Similarity=0.175 Sum_probs=64.4
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC------C--cEEeCCCCCCchHHHHHHHHhCC
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG------V--TEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g------~--~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
...+++||++|+|. |..+..+++..+..+|++++.+++..+.+++.- . +.+-.. ..+..+.+.....+
T Consensus 118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~---~~D~~~~l~~~~~~ 193 (334)
T 1xj5_A 118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV---IGDGVAFLKNAAEG 193 (334)
T ss_dssp SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE---ESCHHHHHHTSCTT
T ss_pred CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---ECCHHHHHHhccCC
Confidence 45678999998753 666777787765459999999999888887631 1 111111 12333334333234
Q ss_pred CccEEEe-cc---C------ChHHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSFE-CI---G------DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vid-~~---g------~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.||+|+- .. + ....+..+.+.|+++ |.++.-
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~ 234 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ 234 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 7998883 32 1 235678889999997 998875
|
| >1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38 | Back alignment and structure |
|---|
Probab=94.97 E-value=0.096 Score=47.21 Aligned_cols=100 Identities=16% Similarity=0.235 Sum_probs=64.8
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHH
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~ 259 (378)
....+++|++||=.|+|. |..++++|+.++ ..+|++++.++.+.+.+++ +|... ++..+ ...+. .
T Consensus 112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D--~~~~~----~- 183 (315)
T 1ixk_A 112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS--SLHIG----E- 183 (315)
T ss_dssp HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC--GGGGG----G-
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECC--hhhcc----c-
Confidence 345688999999888753 556667777653 2389999999998877755 45533 33322 11211 1
Q ss_pred hCCCccEEE-e--ccCC-------------------------hHHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSF-E--CIGD-------------------------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.||+|+ | |.|. ...+..+.+.|+++ |+++...
T Consensus 184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~st 246 (315)
T 1ixk_A 184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYST 246 (315)
T ss_dssp GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEe
Confidence 134799887 4 3332 15667788899997 9988753
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=94.95 E-value=0.12 Score=47.55 Aligned_cols=134 Identities=18% Similarity=0.106 Sum_probs=82.1
Q ss_pred CeEEEEccChHHHHHHHHHHHc-CCCeEEEE-cCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGLGTVGLSVAQGAKAR-GASRIIGV-DTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v-~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
-+|.|+|+|.+|...+..++.. ++ +++++ ++++++.+.++++|+.. ++ ++.+.+. ...+|+|+.|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~~---~~----~~~~ll~---~~~~D~V~i~tp 74 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLKI---YE----SYEAVLA---DEKVDAVLIATP 74 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCCB---CS----CHHHHHH---CTTCCEEEECSC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCce---eC----CHHHHhc---CCCCCEEEEcCC
Confidence 3689999999999888877766 66 66654 77888888777787632 22 3433333 237899999998
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-cc--ccccEEEEeeeccCCcCCcHHHHHHHHHcCCCC
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LF--LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFM 343 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~--~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (378)
.....+.+..++.. |+-|.+..+.....-..... .. .+++.+.-.. .......+..+.+++.+|.+-
T Consensus 75 ~~~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~--~~r~~p~~~~~k~~i~~g~iG 144 (359)
T 3e18_A 75 NDSHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQ--NRRWDEDFLIIKEMFEQKTIG 144 (359)
T ss_dssp GGGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEEC--GGGGCHHHHHHHHHHHHTTTS
T ss_pred cHHHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEe--eeccCHHHHHHHHHHHcCCCC
Confidence 87777778888885 66666654432110000000 00 1233332111 112234577888888888764
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=94.94 E-value=0.064 Score=50.80 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=67.3
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHH-cCCC--eEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKA-RGAS--RIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~-~g~~--~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
+.-..+|||+|+|++|..++.++.. .+.. .|+.++.++.+.+..+.+|.... +..+ ..+..+.+..+..++ |+
T Consensus 10 ~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vd--adnv~~~l~aLl~~~-Dv 86 (480)
T 2ph5_A 10 ILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQIT--PQNYLEVIGSTLEEN-DF 86 (480)
T ss_dssp BCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCC--TTTHHHHTGGGCCTT-CE
T ss_pred ecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEecc--chhHHHHHHHHhcCC-CE
Confidence 3445689999999999999987765 4442 67777777666666666675432 2333 344545555554444 99
Q ss_pred EEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 267 SFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 267 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
|++++-....+..+-.|+..+ -.+++...
T Consensus 87 VIN~s~~~~~l~Im~acleaG-v~YlDTa~ 115 (480)
T 2ph5_A 87 LIDVSIGISSLALIILCNQKG-ALYINAAT 115 (480)
T ss_dssp EEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred EEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence 999775545555666677765 66777764
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=94.93 E-value=0.028 Score=52.04 Aligned_cols=74 Identities=19% Similarity=0.234 Sum_probs=48.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
.+++|||+|+ |.+|..+++.+...|. +|+++++++++.......+...+ .|.. +. +.+.++. .++|+||.+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~v~~~~~Dl~--d~---~~~~~~~-~~~d~Vih~ 100 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDMFCDEFHLVDLR--VM---ENCLKVT-EGVDHVFNL 100 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGGTCSEEEECCTT--SH---HHHHHHH-TTCSEEEEC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCCccchhhccCCceEEECCCC--CH---HHHHHHh-CCCCEEEEC
Confidence 3578999998 9999999999888898 89999887654332222233222 2332 22 2233322 278999999
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
.+.
T Consensus 101 A~~ 103 (379)
T 2c5a_A 101 AAD 103 (379)
T ss_dssp CCC
T ss_pred cee
Confidence 873
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=94.91 E-value=0.077 Score=46.92 Aligned_cols=42 Identities=19% Similarity=0.143 Sum_probs=35.4
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
+|.|+|+|.+|...+..+.. |. +|+++++++++.+.+.+.|.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~ 44 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFG 44 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHC
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCC
Confidence 68899999999998888877 98 79999999888877766554
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=94.91 E-value=0.1 Score=47.36 Aligned_cols=36 Identities=33% Similarity=0.512 Sum_probs=32.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+.+|+|+|+|++|..++..+...|..+++.++.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 478999999999999999999999998898887643
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=94.90 E-value=0.1 Score=47.35 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=46.8
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHHHHh-CC--CcEE-eCCCCCCchHHHHHHH
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----------EKCEKAKA-FG--VTEF-LNPNDNNEPVQQVIKR 258 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----------~~~~~l~~-~g--~~~v-i~~~~~~~~~~~~i~~ 258 (378)
+++|||+|+ |.+|..+++.+...|. +|++++++. +..+.+++ .+ ...+ .|..+ ...+.+.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILD-QGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCC-HHHHHHHHHh
Confidence 468999998 9999999998888898 888887643 23333332 12 2222 23331 1223233322
Q ss_pred HhCCCccEEEeccCC
Q 017052 259 ITDGGADYSFECIGD 273 (378)
Q Consensus 259 ~~~~~~d~vid~~g~ 273 (378)
.++|+||.+.+.
T Consensus 80 ---~~~d~vih~A~~ 91 (348)
T 1ek6_A 80 ---YSFMAVIHFAGL 91 (348)
T ss_dssp ---CCEEEEEECCSC
T ss_pred ---cCCCEEEECCCC
Confidence 178999999874
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=94.89 E-value=0.11 Score=47.51 Aligned_cols=87 Identities=15% Similarity=0.275 Sum_probs=57.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++..+.+... +...+ .++.+.+. ..|+|+-++.
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~-------~~l~ell~-----~sDvV~l~~P 236 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH-------DTLDSLLG-----ASDIFLIAAP 236 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC-------SSHHHHHH-----TCSEEEECSC
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe-------CCHHHHHh-----hCCEEEEecC
Confidence 47899999999999999999999999 9999998765444322 43211 12333332 4577776665
Q ss_pred Ch-H----HHHHHHHHhccCCccEEEec
Q 017052 273 DT-G----MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~-~----~~~~~~~~l~~~~G~~v~~g 295 (378)
.+ + .-...+..|+++ ..+|+++
T Consensus 237 lt~~T~~li~~~~l~~mk~g-ailIN~a 263 (345)
T 4g2n_A 237 GRPELKGFLDHDRIAKIPEG-AVVINIS 263 (345)
T ss_dssp CCGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred CCHHHHHHhCHHHHhhCCCC-cEEEECC
Confidence 31 1 113556677775 6677665
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=94.88 E-value=0.11 Score=48.27 Aligned_cols=36 Identities=17% Similarity=0.209 Sum_probs=30.1
Q ss_pred CCeEEEEcc-ChHHHHHHHHHH-HcCCCeEEEEcCChhh
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAK-ARGASRIIGVDTNPEK 230 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~-~~g~~~vi~v~~~~~~ 230 (378)
+.+|||+|+ |.+|..+++.+. ..|. +|++++++...
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~ 39 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSLVGT 39 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECCTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecCCcc
Confidence 358999998 999999998888 8998 89999876543
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=94.87 E-value=0.073 Score=54.41 Aligned_cols=82 Identities=22% Similarity=0.307 Sum_probs=55.2
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHH-HcCCCeEEEEcCChh-------hHHHHHhCCCcEEe---CCCCCCchHHHHHHH
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAK-ARGASRIIGVDTNPE-------KCEKAKAFGVTEFL---NPNDNNEPVQQVIKR 258 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~-~~g~~~vi~v~~~~~-------~~~~l~~~g~~~vi---~~~~~~~~~~~~i~~ 258 (378)
+.+++++||+|+ |++|+++++.+. ..|+++++.+.++.. ..+.+++.|....+ |.. +..++.+.+.+
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvs-d~~~v~~~~~~ 605 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVA-DRETLAKVLAS 605 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-CHHHHHHHHHT
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecC-CHHHHHHHHHH
Confidence 357899999987 999999998776 789966888888732 22334556765432 443 13344445555
Q ss_pred HhCC-CccEEEeccCC
Q 017052 259 ITDG-GADYSFECIGD 273 (378)
Q Consensus 259 ~~~~-~~d~vid~~g~ 273 (378)
.... ++|++|++.|.
T Consensus 606 ~~~~~~id~lVnnAGv 621 (795)
T 3slk_A 606 IPDEHPLTAVVHAAGV 621 (795)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred HHHhCCCEEEEECCCc
Confidence 4333 78999999874
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=94.84 E-value=0.06 Score=49.59 Aligned_cols=84 Identities=23% Similarity=0.249 Sum_probs=51.5
Q ss_pred CCCCCCeEEEEcc-ChHHHHHH-HHHHHcCCCeEEEEcCChhh----------------HHHHHhCCCcEE-eCCCC-CC
Q 017052 190 DISKGSTVVIFGL-GTVGLSVA-QGAKARGASRIIGVDTNPEK----------------CEKAKAFGVTEF-LNPND-NN 249 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~ai-qla~~~g~~~vi~v~~~~~~----------------~~~l~~~g~~~v-i~~~~-~~ 249 (378)
....++++||+|+ +++|++.. .+|...|+ .++++....+. .+.+++.|.... ++.+- ++
T Consensus 46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~ 124 (401)
T 4ggo_A 46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD 124 (401)
T ss_dssp TSCCCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred ccCCCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence 3456899999998 89999754 55657788 77777554321 244566666553 33321 13
Q ss_pred chHHHHHHHHh--CCCccEEEeccCCh
Q 017052 250 EPVQQVIKRIT--DGGADYSFECIGDT 274 (378)
Q Consensus 250 ~~~~~~i~~~~--~~~~d~vid~~g~~ 274 (378)
+...+.+.++. .|++|+++.+++.+
T Consensus 125 e~i~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 125 EIKAQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEecccc
Confidence 33333333332 34899999988753
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=94.81 E-value=0.094 Score=47.80 Aligned_cols=74 Identities=14% Similarity=0.211 Sum_probs=47.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHH-hC------CCcEE-eCCCCCCchHHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE----KCEKAK-AF------GVTEF-LNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~----~~~~l~-~~------g~~~v-i~~~~~~~~~~~~i~~~ 259 (378)
.+.+|||+|+ |.+|..+++.+...|. +|++++++.. +.+.+. .+ +...+ .|.. +. +.+.++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~---~~~~~~ 99 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIR--NL---DDCNNA 99 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTT--SH---HHHHHH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCC--CH---HHHHHH
Confidence 3578999998 9999999999988898 8999988643 233222 11 22211 2332 22 223333
Q ss_pred hCCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGD 273 (378)
Q Consensus 260 ~~~~~d~vid~~g~ 273 (378)
.. ++|+||.+.+.
T Consensus 100 ~~-~~d~vih~A~~ 112 (352)
T 1sb8_A 100 CA-GVDYVLHQAAL 112 (352)
T ss_dssp HT-TCSEEEECCSC
T ss_pred hc-CCCEEEECCcc
Confidence 22 78999999874
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.053 Score=48.43 Aligned_cols=73 Identities=12% Similarity=0.172 Sum_probs=47.3
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
+++|||+|+ |.+|..+++.+... |. +|++++++..+.+... +...+ .|..+ ...+.+.+.+ .++|+||.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d-~~~~~~~~~~---~~~d~vih 74 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTE-NVIASDIRKLNTDVVN--SGPFEVVNALD-FNQIEHLVEV---HKITDIYL 74 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGG-GEEEEESCCCSCHHHH--SSCEEECCTTC-HHHHHHHHHH---TTCCEEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCC-EEEEEcCCCccccccC--CCceEEecCCC-HHHHHHHHhh---cCCCEEEE
Confidence 468999998 99999999888777 77 8999888766544332 22222 23331 1223233322 17899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.+.
T Consensus 75 ~a~~ 78 (312)
T 2yy7_A 75 MAAL 78 (312)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9875
|
| >3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* | Back alignment and structure |
|---|
Probab=94.80 E-value=0.073 Score=46.06 Aligned_cols=97 Identities=15% Similarity=0.154 Sum_probs=67.3
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHHHhC
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~~~~ 261 (378)
..++++.+||-+|+|. |..+..+++..+. ++++++.++...+.+++ .|.. .++..+ ..++ .+..
T Consensus 42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~-----~~~~ 112 (257)
T 3f4k_A 42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGS--MDNL-----PFQN 112 (257)
T ss_dssp CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TTSC-----SSCT
T ss_pred hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECC--hhhC-----CCCC
Confidence 4678899999999874 8888899999887 99999999988877654 3432 222221 1111 0112
Q ss_pred CCccEEEec-----cCChHHHHHHHHHhccCCccEEEec
Q 017052 262 GGADYSFEC-----IGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 ~~~d~vid~-----~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.+|+|+-. .+-...+..+.+.|+++ |+++...
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~ 150 (257)
T 3f4k_A 113 EELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE 150 (257)
T ss_dssp TCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred CCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 379998742 23345678888999997 9988764
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=94.79 E-value=0.028 Score=48.56 Aligned_cols=70 Identities=23% Similarity=0.307 Sum_probs=44.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 273 (378)
++|||+|+ |.+|..++..+...|+ +|+++++++++.+. ....|.. +...+.+.+.++ .+++|++|.+.|.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~~~D~~-~~~~~~~~~~~~-~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------DLSTPGG-RETAVAAVLDRC-GGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHH-HHHHHHHHHHHH-TTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------cccCCcc-cHHHHHHHHHHc-CCCccEEEECCCC
Confidence 47999998 9999999998888998 89999887654311 1000110 011222222222 2579999998874
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.79 E-value=0.079 Score=48.01 Aligned_cols=74 Identities=23% Similarity=0.322 Sum_probs=46.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh--h---hHHHHHhCCCcEEe--CCCCCCchHHHHHHHHhCCCccE
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--E---KCEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~--~---~~~~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
++|||+|+ |.+|..+++.+...|. +|++++++. . ..+.++..+.-.++ |..+ ...+.+.+.. .++|+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d-~~~~~~~~~~---~~~d~ 76 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN-KNDVTRLITK---YMPDS 76 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHH---HCCSE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCccCchhhhhhhccCCceEEEEcCCCC-HHHHHHHHhc---cCCCE
Confidence 47999998 9999999999988998 899987632 1 12233333322222 3321 1223333322 16899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
||.+.+.
T Consensus 77 vih~A~~ 83 (347)
T 1orr_A 77 CFHLAGQ 83 (347)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999874
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=94.77 E-value=0.073 Score=47.11 Aligned_cols=68 Identities=25% Similarity=0.327 Sum_probs=50.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
..++++||+|+|++|.+++..+...|+++|+++.|+.++.+.+.+ +. .+. +. .+.++ .+|+||+|
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~-------~~-~l~~l---~~DivIna 185 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VIS-------YD-ELSNL---KGDVIINC 185 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEE-------HH-HHTTC---CCSEEEEC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---ccc-------HH-HHHhc---cCCEEEEC
Confidence 368999999999999999999999999889999999988766543 21 221 21 12221 68999999
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
+..
T Consensus 186 Tp~ 188 (282)
T 3fbt_A 186 TPK 188 (282)
T ss_dssp SST
T ss_pred Ccc
Confidence 853
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=94.77 E-value=0.012 Score=50.56 Aligned_cols=101 Identities=15% Similarity=0.189 Sum_probs=59.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.+++|||+|+ |.+|..+++.+...|+. +|+++++++++.+.+..-+...+ .|.. +. +.+.++.. ++|++|+
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~--d~---~~~~~~~~-~~d~vi~ 90 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE--KL---DDYASAFQ-GHDVGFC 90 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGG--GG---GGGGGGGS-SCSEEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcC--CH---HHHHHHhc-CCCEEEE
Confidence 3679999998 99999999988888862 68888887654332211122221 2222 11 12222222 6899999
Q ss_pred ccCChH--------------HHHHHHHHhcc-CCccEEEeccCCC
Q 017052 270 CIGDTG--------------MITTALQSCCD-GWGLAVTLGVPKL 299 (378)
Q Consensus 270 ~~g~~~--------------~~~~~~~~l~~-~~G~~v~~g~~~~ 299 (378)
+.|... ....+++.+.+ +.++++.++....
T Consensus 91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~ 135 (242)
T 2bka_A 91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA 135 (242)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence 998521 11223334433 2268888876543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=94.77 E-value=0.058 Score=48.86 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=45.6
Q ss_pred eEEEEcc-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhC-CCcEE-eCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 196 TVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAF-GVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~-g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+|||+|+ |.+|..+++.+... |. +|++++++.++.+.+... +...+ .|..+....+.+.+. ++|+||.+.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A 75 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLV 75 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECB
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEcc
Confidence 6999998 99999999988887 78 899998887665433221 22221 233311112222222 589999987
Q ss_pred C
Q 017052 272 G 272 (378)
Q Consensus 272 g 272 (378)
+
T Consensus 76 ~ 76 (345)
T 2bll_A 76 A 76 (345)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=94.73 E-value=0.057 Score=48.63 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=61.9
Q ss_pred eEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhC-CC---cEEeCCCCCCchHHHHHHHHhCCCccEEE-e
Q 017052 196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAF-GV---TEFLNPNDNNEPVQQVIKRITDGGADYSF-E 269 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~-g~---~~vi~~~~~~~~~~~~i~~~~~~~~d~vi-d 269 (378)
+||++|+|. |..+..+++.. +. ++++++.+++-.+.+++. +. +.+-.. ..+..+.+.....+.||+|| |
T Consensus 92 rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~---~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 92 RITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIR---VDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp EEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEE---ESCHHHHHHTCCTTCEEEEEEC
T ss_pred EEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEE---ECcHHHHHhhccCCCCCEEEEC
Confidence 899998753 66777888854 66 899999999999998873 22 111101 12333444443344899887 4
Q ss_pred ccCC---------hHHHHHHHHHhccCCccEEEec
Q 017052 270 CIGD---------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 270 ~~g~---------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.... .+.+..+.+.|+++ |.++...
T Consensus 167 ~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~ 200 (317)
T 3gjy_A 167 VFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANC 200 (317)
T ss_dssp CSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEe
Confidence 3221 35678889999997 9877543
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=94.71 E-value=0.055 Score=48.79 Aligned_cols=98 Identities=14% Similarity=0.100 Sum_probs=62.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC--------cEEeCCCCCCchHHHHHHHHhCCC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------TEFLNPNDNNEPVQQVIKRITDGG 263 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~--------~~vi~~~~~~~~~~~~i~~~~~~~ 263 (378)
..+++||++|+|. |..+..+++..+..++++++.+++-.+.+++.-. +.+-.. ..+..+.+.. ..+.
T Consensus 107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~---~~D~~~~l~~-~~~~ 181 (314)
T 2b2c_A 107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF---CGDGFEFLKN-HKNE 181 (314)
T ss_dssp SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE---CSCHHHHHHH-CTTC
T ss_pred CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE---EChHHHHHHh-cCCC
Confidence 4568999998753 6667777776554499999999999988876311 111111 1233333333 3348
Q ss_pred ccEEEeccCC----------hHHHHHHHHHhccCCccEEEec
Q 017052 264 ADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 264 ~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+|+|+-.... ...+..+.+.|+++ |.++.-.
T Consensus 182 fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~ 222 (314)
T 2b2c_A 182 FDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG 222 (314)
T ss_dssp EEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred ceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence 9998832211 35677888999997 9988754
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.043 Score=48.82 Aligned_cols=37 Identities=35% Similarity=0.481 Sum_probs=33.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
.|++|.|+|.|.+|..+++.++..|. +|++.+++.++
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~ 157 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVD 157 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCC
T ss_pred ecchheeeccCchhHHHHHHHHhhCc-EEEEEeccccc
Confidence 57899999999999999999999999 99999887654
|
| >3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} | Back alignment and structure |
|---|
Probab=94.70 E-value=0.15 Score=44.44 Aligned_cols=101 Identities=20% Similarity=0.290 Sum_probs=68.2
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~ 257 (378)
+.+...+.++.+||-+|+|. |..+..+++..+. ++++++.+++..+.+++ .|.. .++..+-.+..
T Consensus 53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------ 124 (273)
T 3bus_A 53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP------ 124 (273)
T ss_dssp HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC------
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC------
Confidence 44667788999999999864 7788888888888 99999999988777654 2322 22222100111
Q ss_pred HHhCCCccEEEecc-----C-ChHHHHHHHHHhccCCccEEEec
Q 017052 258 RITDGGADYSFECI-----G-DTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~~~~~d~vid~~-----g-~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
...+.+|+|+-.- . ....+..+.+.|+++ |+++...
T Consensus 125 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~ 166 (273)
T 3bus_A 125 -FEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIAD 166 (273)
T ss_dssp -SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred -CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 1123799988432 1 234677888899997 9988764
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=94.67 E-value=0.032 Score=49.99 Aligned_cols=68 Identities=18% Similarity=0.296 Sum_probs=38.5
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+++|||+|+ |.+|..+++.+...|. +|++++++.++. + ....|..+ ...+.+.+... ++|+||.+.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------~-~~~~Dl~d-~~~~~~~~~~~---~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRARP------K-FEQVNLLD-SNAVHHIIHDF---QPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC--------------------------CHHHHHHH---CCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCCC------C-eEEecCCC-HHHHHHHHHhh---CCCEEEECCc
Confidence 578999998 9999999999988898 899998765441 1 11122221 12232333322 6899999887
Q ss_pred C
Q 017052 273 D 273 (378)
Q Consensus 273 ~ 273 (378)
.
T Consensus 70 ~ 70 (315)
T 2ydy_A 70 E 70 (315)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=94.66 E-value=0.076 Score=47.61 Aligned_cols=98 Identities=17% Similarity=0.118 Sum_probs=64.0
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC--------Cc--EEeCCCCCCchHHHHHHHHh
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--------VT--EFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g--------~~--~vi~~~~~~~~~~~~i~~~~ 260 (378)
..++++||++|+|. |..+..+++..+..++++++.+++-.+.+++.- .. .++. .+..+.+....
T Consensus 93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~-----~D~~~~~~~~~ 166 (304)
T 3bwc_A 93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV-----GDGLAFVRQTP 166 (304)
T ss_dssp SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHHHHHSSC
T ss_pred CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE-----CcHHHHHHhcc
Confidence 35678999998753 666777777655459999999999888877632 11 1221 12333333212
Q ss_pred CCCccEEEeccCC----------hHHHHHHHHHhccCCccEEEec
Q 017052 261 DGGADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~~~~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+.+|+|+-.... .+.+..+.+.|+++ |.++...
T Consensus 167 ~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~ 210 (304)
T 3bwc_A 167 DNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQG 210 (304)
T ss_dssp TTCEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 3489998843211 25677888999997 9988764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 378 | ||||
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 3e-45 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 5e-41 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 3e-40 | |
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 6e-40 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 1e-39 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 2e-39 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 8e-39 | |
| d1p0fa1 | 198 | b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro | 1e-37 | |
| d1e3ia1 | 202 | b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase | 2e-35 | |
| d2jhfa1 | 198 | b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase | 3e-33 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 2e-32 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 2e-29 | |
| d1f8fa1 | 194 | b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr | 2e-27 | |
| d1uufa1 | 179 | b.35.1.2 (A:3-144,A:313-349) Hypothetical protein | 9e-20 | |
| d1llua1 | 175 | b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase | 2e-19 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 7e-18 | |
| d1vj0a1 | 184 | b.35.1.2 (A:2-155,A:338-367) Hypothetical protein | 5e-17 | |
| d1jvba1 | 177 | b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase | 1e-16 | |
| d1piwa1 | 192 | b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy | 1e-15 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 4e-15 | |
| d1e3ja1 | 178 | b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor | 3e-14 | |
| d1rjwa1 | 171 | b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase | 9e-14 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 3e-12 | |
| d1pl8a1 | 185 | b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor | 5e-12 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 6e-12 | |
| d1jqba1 | 177 | b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon | 1e-11 | |
| d1h2ba1 | 171 | b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas | 2e-11 | |
| d1pl8a2 | 171 | c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh | 6e-11 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 1e-10 | |
| d1e3ja2 | 170 | c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh | 6e-08 | |
| d1uufa2 | 168 | c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc | 2e-07 | |
| d1piwa2 | 168 | c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase | 3e-06 | |
| d1iz0a1 | 131 | b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase | 6e-06 | |
| d1gu7a1 | 175 | b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu | 1e-05 | |
| d1yb5a1 | 150 | b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas | 3e-04 | |
| d1xa0a1 | 152 | b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo | 7e-04 | |
| d1pqwa_ | 183 | c.2.1.1 (A:) Putative enoyl reductase domain of po | 8e-04 | |
| d1hwxa1 | 293 | c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow ( | 0.002 | |
| d2g5ca2 | 171 | c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA { | 0.004 |
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 151 bits (382), Expect = 3e-45
Identities = 80/175 (45%), Positives = 106/175 (60%)
Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
AP EK+CL+ CG S G GAA + GST V+FGLG VGLSV G K+ GASRIIG+D
Sbjct: 2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61
Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
N +K EKA A G TE ++P D+ +P+ +V+ +T Y+FE IG + AL SC
Sbjct: 62 LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121
Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
+G +V +GVP + L +GRT KG +FGG K + D+P LV +L K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 140 bits (353), Expect = 5e-41
Identities = 83/176 (47%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
APLE CL+ CG + G GAA N A ++ GST +FGLG VG S G KA GASRIIGV
Sbjct: 1 APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59
Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
T+ +K KA G TE LNP D ++P+ +VI T+GG DY+ EC G + ALQS
Sbjct: 60 THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119
Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKE 341
G G+ V LG+ + L L+GR+LKGS+FGG+K + ++ LV+ Y+KK+
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKK 174
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 138 bits (348), Expect = 3e-40
Identities = 85/176 (48%), Positives = 120/176 (68%)
Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
+PLEK+CL+ CG S G G+A VA +++GST +FGLG VGLSV G KA GA+RIIGVD
Sbjct: 1 SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60
Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
N +K KAK G TE +NP D +P+Q+V+ +++GG D+SFE IG + TAL C
Sbjct: 61 INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120
Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKE 341
+ +G++V +GVP ++ + L LSGRT KG++FGG+K K +P LV ++ K+
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 138 bits (348), Expect = 6e-40
Identities = 75/197 (38%), Positives = 106/197 (53%), Gaps = 3/197 (1%)
Query: 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRI 66
+VI CKAAVAW A +PLV+EE+EV+ P EIRIK++ T +C +D+
Sbjct: 3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF 62
Query: 67 F---GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
GHE +GIVESVGPGVTEF GE V+ +FI +C CR C+S K+N C
Sbjct: 63 PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122
Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
+ S ++TRF+ KG+ V + S+FS+YTVV+ K+ L++ L +
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVND 182
Query: 184 AAWNVADISKGSTVVIF 200
A + TV+
Sbjct: 183 AIDLMKHGKCIRTVLSL 199
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 136 bits (344), Expect = 1e-39
Identities = 78/176 (44%), Positives = 104/176 (59%), Gaps = 2/176 (1%)
Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
A LE++CL+ CG S+G GAA N A ++ GST +FGLG VGLS G K GASRII +D
Sbjct: 1 ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60
Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
N EK KAKA G T+ LNP + ++PVQ VI +T GG DYS +C G + A+
Sbjct: 61 INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120
Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKE 341
GWG +G E+ + GR++ G+ FGGWK +P+LV+ Y K+
Sbjct: 121 LGWGSCTVVGAK--VDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 137 bits (345), Expect = 2e-39
Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 3/194 (1%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPR 65
+VI CKAAVAW AG+PL +EE+EV PP+ E+RIK++ T++C +D + FP
Sbjct: 3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
I GH +GIVESVG GVT+ G+ V+ ++I +C C+ C + K+N C+ + + + +
Sbjct: 63 ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
D +RF+ KGK + HY S+FSEYTVV K+ + +++ + A
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAF 182
Query: 186 WNVADISKGSTVVI 199
+ TVV
Sbjct: 183 ELMHSGKSIRTVVK 196
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 135 bits (339), Expect = 8e-39
Identities = 89/176 (50%), Positives = 120/176 (68%)
Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
APL+K+CLL CG+S G GAA N A + GS +FGLG VGL+V G K GASRIIGVD
Sbjct: 1 APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60
Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
N +K +AK FG TE +NP D ++P+Q+V+ +TDGG DYSFECIG+ ++ AL++C
Sbjct: 61 INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120
Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKE 341
GWG++V +GV E+A ++GRT KG+ FGGWK +P LV+ Y+ K+
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 132 bits (333), Expect = 1e-37
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 12/203 (5%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF- 67
+ ITCKAAVAW +PL +E + V PP+ E+RIK++ + +C SD + +
Sbjct: 5 KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVI 64
Query: 68 -GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHEA G+VES+G GVT G+ V+ +F+ +C +CR CKS SN CE + + + +
Sbjct: 65 LGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMA 124
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
D +RF+ +GKP+Y+ S+F+EYTVV K+ + + L
Sbjct: 125 DMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL-------- 176
Query: 187 NVADISKGSTVVIFGLGTVGLSV 209
I+K ++ G G + +
Sbjct: 177 --DQINKAFELLSSGQGVRSIMI 197
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 126 bits (317), Expect = 2e-35
Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 9/199 (4%)
Query: 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFP 64
Q +VI CKAA+AW G PL +EE+EV+PP+ E+RI+V+ T +C +D T + +A+FP
Sbjct: 3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFP 62
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL----GLER 120
+ GHE +GIVESVGPGVT F G+ V+ F +CK C+ C S +N C L
Sbjct: 63 VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180
+ D+ +RF+ KG+ +YH+ VSSFS+YTVV +V L+ + + +
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFES 182
Query: 181 GLGAAWNVADISKGSTVVI 199
A + + +G ++
Sbjct: 183 INDA---IDLMKEGKSIRT 198
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 121 bits (303), Expect = 3e-33
Identities = 69/195 (35%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Query: 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRI-- 66
+VI CKAAV W +P +EEVEV PP+ E+RIK+V T +CRSD + P
Sbjct: 5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHEA+GIVES+G GVT G+ V+ +F +C CR CK + N C L
Sbjct: 65 AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
D +RF+ +GKP++H+ S+FS+YTVV K+ + L+ L +
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALD---PLITHVLPFEKINE 181
Query: 187 NVADISKGSTVVIFG 201
+ G ++
Sbjct: 182 GFDLLRSGESIRTIL 196
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 118 bits (295), Expect = 2e-32
Identities = 88/176 (50%), Positives = 122/176 (69%), Gaps = 1/176 (0%)
Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
APL+ +CLL CG+S G GAA N A + GST +FGLG VGL+ G + GA RII VD
Sbjct: 1 APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60
Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
NP+K EKAK FG T+F+NPND++EP+ QV+ ++T+GG D+S EC+G+ G++ AL+SC
Sbjct: 61 LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120
Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKE 341
GWG++V +G +VA ++GRT KGS+FGG+K K +P +V YL K+
Sbjct: 121 KGWGVSVLVGWTD-LHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 109 bits (274), Expect = 2e-29
Identities = 57/176 (32%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Query: 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226
P+E + L CG+ G GA N ++ S+ V +G G VGLS AK GAS II VD
Sbjct: 2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61
Query: 227 NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD 286
+ E AK G T +N + IK ITDGG +++ E G ++
Sbjct: 62 VESRLELAKQLGATHVINSKT--QDPVAAIKEITDGGVNFALESTGSPEILKQG-VDALG 118
Query: 287 GWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKE 341
G +G P+L L L G+T+ G + G PK +P LV Y + +
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGK 174
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 105 bits (261), Expect = 2e-27
Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 30/217 (13%)
Query: 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFGH 69
AAV G ++ +++ PQ +E+ +KVV T +C +D+ + P + GH
Sbjct: 3 DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGH 62
Query: 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
E SGI+E++GP VTE G+HV+ + G C C QC + C S+
Sbjct: 63 EGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGN 121
Query: 130 TRFSIKGK--PVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
+ H+ A SSF+ Y + VKV+ P +++
Sbjct: 122 HALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQL---------------- 165
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV 224
V + + + K II +
Sbjct: 166 ---------VKFYAFDEINQAAIDSRKGITLKPIIKI 193
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 83.8 bits (206), Expect = 9e-20
Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 18/190 (9%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASG 73
KA A+ A QPL ++ P P +++I++ +C SD+ ++
Sbjct: 2 KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61
Query: 74 IVESV---GPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
IV V G V ++ G+ V + + CK C +C+ N C+ +
Sbjct: 62 IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPT----- 116
Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNV 188
P + +S+ VVH +++ + + + ++ L
Sbjct: 117 --------PDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKY 168
Query: 189 ADISKGSTVV 198
+ T+
Sbjct: 169 RFVIDNRTLT 178
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 82.3 bits (202), Expect = 2e-19
Identities = 47/195 (24%), Positives = 72/195 (36%), Gaps = 32/195 (16%)
Query: 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE----TQAIFPRIF 67
T KAAV G PL +EEV+V P P ++ +K+ + +C +D+ A E + P I
Sbjct: 5 TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 64
Query: 68 GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHE G V +VG GVT EG+ V + C C C + CE
Sbjct: 65 GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCES----------- 113
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
+ Y ++EY + + P + G +
Sbjct: 114 ----------QQNTGYSVNGGYAEYVLADPNYVGIL----PKNVKATIHPGKLDDINQIL 159
Query: 187 NV--ADISKGSTVVI 199
+ A +G V+
Sbjct: 160 DQMRAGQIEGRIVLE 174
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 78.4 bits (192), Expect = 7e-18
Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 6/166 (3%)
Query: 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226
PLE +++ ++ G A +ADI GS+VV+ G+G VGL GAK RGA RIIGV +
Sbjct: 2 PLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60
Query: 227 NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD 286
P E AK +G T+ LN + + QV+K G D G + ++ A++
Sbjct: 61 RPICVEAAKFYGATDILNYKNGHIE-DQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119
Query: 287 GWGLAVTLGVPKLKPEV---AAHYGLFLSGRTLKGSLFGGWKPKTD 329
G G+ + + +G ++ +T+KG L G + + +
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 76.0 bits (186), Expect = 5e-17
Identities = 35/199 (17%), Positives = 64/199 (32%), Gaps = 28/199 (14%)
Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET---QAIFPRIF 67
+ A V QPLV +E E++ I ++++ +C SD+ + + P I
Sbjct: 3 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62
Query: 68 GHEASGIVESVGPGVTEFNEGE-----HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
GHE +G V V + N ++ C C CK K
Sbjct: 63 GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYL--------- 113
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAG 181
+ + I + +S + V+ +KVS L
Sbjct: 114 ---CPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL--PLKEAN--- 165
Query: 182 LGAAWNVADISKGSTVVIF 200
A + + + V+++
Sbjct: 166 --KALELMESREALKVILY 182
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 74.6 bits (182), Expect = 1e-16
Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 35/198 (17%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-----------TQAI 62
+A G+PL ++E+ V P+ ++ IKV +C SD+ +
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 63 FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
P GHE +G +E VG V +++G+ V C C+ + + C+
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR----- 116
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV-HSGCAVKVSSIAPLEKICLLSCGLSAG 181
+++EY +V H K+ + P+ + +
Sbjct: 117 ----------------WLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEA 160
Query: 182 LGAAWNVADISKGSTVVI 199
+ N I G V+I
Sbjct: 161 IDNLENFKAI--GRQVLI 176
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 72.2 bits (176), Expect = 1e-15
Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 16/185 (8%)
Query: 20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIFGHEASGIVE 76
+ + + P +I IK+ +C SDI P + GHE G V
Sbjct: 16 EDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVV 75
Query: 77 SVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKG 136
+GP + + V + +C +C + + +
Sbjct: 76 KLGPKSNSGLKVGQRVGVGA-QVFSCLECDRC-----------KNDNEPYCTKFVTTYSQ 123
Query: 137 KPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGST 196
Y + ++ Y VH V + +E + + G+ D+ T
Sbjct: 124 PYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF-ERMEKGDVRYRFT 182
Query: 197 VVIFG 201
+V +
Sbjct: 183 LVGYD 187
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 71.1 bits (173), Expect = 4e-15
Identities = 41/216 (18%), Positives = 70/216 (32%), Gaps = 28/216 (12%)
Query: 14 KAAVAWGAGQPLVVEEVEV-------NPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRI 66
+ V G+G+ + V++++ + +KVV T++C SD +
Sbjct: 3 RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 61
Query: 67 F--GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
GHE +G V G V G+ V F C CR CK + C + R G
Sbjct: 62 LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS--GCAVKVSSIAPLEKICLLSCGLSAGL 182
+ G +EY +V +K+ + ++ + +
Sbjct: 122 YGYVDMGDWTGG-----------QAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQV 170
Query: 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218
+ + A G F G V K A
Sbjct: 171 ISLDD-APRGYG----EFDAGVPKKFVIDPHKTFSA 201
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 68.1 bits (165), Expect = 3e-14
Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 28/193 (14%)
Query: 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPRIFG 68
+AV + L +E+ + P+ +E+ +++ +C SD+ +E P + G
Sbjct: 4 SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62
Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
HEASG V VG V +G+ V C+ C+ CK K N C
Sbjct: 63 HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC--------------- 107
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
+ + Y V + K+ ++++ S L + A+
Sbjct: 108 -----PDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFEA 161
Query: 189 ADISKGSTVVIFG 201
A +T+ +
Sbjct: 162 ARKKADNTIKVMI 174
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 66.5 bits (161), Expect = 9e-14
Identities = 44/195 (22%), Positives = 67/195 (34%), Gaps = 34/195 (17%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF----GH 69
KAAV +PL ++EVE E+ +++ +C +D+ A GH
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 70 EASGIVESVGPGVTEFNEGEHVLTVFIGECK-TCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
E GIVE VGPGVT G+ V ++ C C S + CE
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCE-------------- 107
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL--LSCGLSAGLGAAW 186
+ Y ++EY + VK+ +E L ++ L
Sbjct: 108 -------HQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQI 160
Query: 187 NVADISKGSTVVIFG 201
N G V+
Sbjct: 161 N------GRVVLTLE 169
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 62.3 bits (150), Expect = 3e-12
Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 5/175 (2%)
Query: 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221
+S +E L G++A + G+ V I G+G +G Q K + +
Sbjct: 1 ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60
Query: 222 IGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTAL 281
I +D EK + A+ G ++ +PV+QV++ G + + + +G +
Sbjct: 61 IALDVKEEKLKLAERLGADHVVDARR--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTP 118
Query: 282 QSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336
G + +G + S + +GSL G + +L +L +
Sbjct: 119 YLLGRM-GRLIIVGYGGELRFPTIR--VISSEVSFEGSLVGNYVELHELVTLALQ 170
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.8 bits (149), Expect = 5e-12
Identities = 36/201 (17%), Positives = 59/201 (29%), Gaps = 31/201 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIF 67
+ V G G L +E + P P E+ +++ +C SD+ WE I P +
Sbjct: 9 LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
GHEASG VE VG V G+ V + CK + N
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLS-------------- 113
Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
+ + ++ K+ L L A+
Sbjct: 114 ------PSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF--PLEKAL-EAFE 164
Query: 188 VADISKGSTVVIFGLGTVGLS 208
G +++ +
Sbjct: 165 TFKKGLGLKIML-KCDPSDQN 184
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 61.5 bits (148), Expect = 6e-12
Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 3/172 (1%)
Query: 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227
L+ + + C + A + G TVVI G G +GL A++ GA +I + +
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62
Query: 228 PEKCEKAKAFGVTEFLNPNDNN--EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
P + + A+ G LN + + E + ++ GAD+ E GD+ + +
Sbjct: 63 PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122
Query: 286 DGWGLA-VTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336
G + + VP+ + L L T KG S+ +R
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR 174
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 60.4 bits (145), Expect = 1e-11
Identities = 36/201 (17%), Positives = 60/201 (29%), Gaps = 31/201 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIFGHE 70
K G + L E E + ++ + S C SDI A+ I GHE
Sbjct: 2 KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60
Query: 71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
A G V VG V +F G+ V+ + ++ + + D
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV- 119
Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD 190
F EY V+ ++A L K LS ++ ++
Sbjct: 120 -----------------FGEYFHVNDADM----NLAILPKDVDLSKLVTHVYHGFDHI-- 156
Query: 191 ISKGSTVVIFGLGTVGLSVAQ 211
+++ L A
Sbjct: 157 ---EEALLLMKDKPKDLIKAV 174
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 59.7 bits (143), Expect = 2e-11
Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 30/193 (15%)
Query: 14 KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPRI 66
KAA +PL +E+V+ ++ +++ +C +D+ + Q P
Sbjct: 1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60
Query: 67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
GHE G +E V GV +G+ V+ TC C++ + CE
Sbjct: 61 LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCEN----------- 109
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
F+E+ +K+ +E ++ L
Sbjct: 110 ----------LEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLE 159
Query: 187 NVADISKGSTVVI 199
++ G V+I
Sbjct: 160 K-GEV-LGRAVLI 170
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.3 bits (140), Expect = 6e-11
Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 8/147 (5%)
Query: 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
LS G+ A ++ G V++ G G +G+ AKA GA++++ D + + K
Sbjct: 12 LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66
Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAV 292
AK G L + + G + + EC G I + + G +
Sbjct: 67 AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATR--SGGTL 124
Query: 293 TLGVPKLKPEVAAHYGLFLSGRTLKGS 319
L + + +KG
Sbjct: 125 VLVGLGSEMTTVPLLHAAIREVDIKGV 151
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 58.3 bits (140), Expect = 1e-10
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227
+ + LS L G A A + GSTV + G G VGL+ A A+ GA+ +I D N
Sbjct: 1 IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59
Query: 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
P + AKA G D P+ + I + D + + +G
Sbjct: 60 PARLAHAKAQGFEIADLSLD--TPLHEQIAALLGEPEVDCAVDAVG 103
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 49.6 bits (117), Expect = 6e-08
Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 11/150 (7%)
Query: 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
LS G+ A A + G+TV++ G G +GL AKA GA + + + E
Sbjct: 12 LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-RLEV 65
Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKR---ITDGGADYSFECIGDTGMITTALQSCCDGWGL 290
AK G L + E +I+R + + +C G+ IT + G
Sbjct: 66 AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGT 124
Query: 291 AVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320
+ +G+ V +K
Sbjct: 125 LMLVGMGSQMVTVPLVN-ACAREIDIKSVF 153
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 48.4 bits (114), Expect = 2e-07
Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 13/173 (7%)
Query: 166 APLEKICLLSCGLSAGLGA--AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIG 223
L + L C AG+ G V + G+G +G + A A G + ++
Sbjct: 4 EQLAAVAPLLC---AGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVA 59
Query: 224 VDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQS 283
T+ K E AKA G E +N + +E + D+ + +
Sbjct: 60 FTTSEAKREAAKALGADEVVNSRNADEMAAHL------KSFDFILNTVAAPHNLDDFTTL 113
Query: 284 CCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336
G +G P + + L + R + GS+ GG ++
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAE 165
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.6 bits (104), Expect = 3e-06
Identities = 26/161 (16%), Positives = 47/161 (29%), Gaps = 11/161 (6%)
Query: 167 PLEKICLLSCGLSAGLGA--AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV 224
P L C GL G V I GLG +G +K + +
Sbjct: 2 PSHLAAPLLC---GGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVI 57
Query: 225 DTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
+ K E A G ++ + + ++ S T + +
Sbjct: 58 SRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASS----LTDIDFNIMPKA 113
Query: 285 CDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
G V++ +P+ ++ L ++ S G K
Sbjct: 114 MKVGGRIVSISIPEQHEMLSLKP-YGLKAVSISYSALGSIK 153
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 43.3 bits (101), Expect = 6e-06
Identities = 10/56 (17%), Positives = 19/56 (33%)
Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGH 69
KA V G PL + ++ + E+ ++V L +D +
Sbjct: 2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPF 57
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 43.6 bits (101), Expect = 1e-05
Identities = 23/209 (11%), Positives = 44/209 (21%), Gaps = 42/209 (20%)
Query: 10 VITCKAAVAWGAGQP---LVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWETQAIFP 64
+IT +A + G+P L + E++ E+ +K + + + SDI +
Sbjct: 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60
Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
+ G E V + S +
Sbjct: 61 PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTW--------RT 112
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
H+ IK A + T
Sbjct: 113 HALGNDDDFIKLPNPAQSKANGKPNGLTDAK---------------------------SI 145
Query: 185 AWNVADISKGSTVVIFGLGT--VGLSVAQ 211
+ G+ G +
Sbjct: 146 ETLYDGTKPLHELYQDGVANSKDGKQLIT 174
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (88), Expect = 3e-04
Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 7/107 (6%)
Query: 14 KAAVAWGAGQPLV---VEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF--- 67
+A + G P V ++ V P+ ++ IKV + + +
Sbjct: 4 RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 63
Query: 68 -GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC 113
G + +G++E+VG + F +G+ V T +
Sbjct: 64 PGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVY 110
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 37.5 bits (86), Expect = 7e-04
Identities = 12/94 (12%), Positives = 28/94 (29%), Gaps = 4/94 (4%)
Query: 12 TCKAAVAWGAGQPLVVE--EVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFPRIF 67
+A V + ++ ++ ++V +S+ D + + + + F
Sbjct: 3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF 62
Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKT 101
V F EG+ V+ T
Sbjct: 63 VPGIDLAGVVVSSQHPRFREGDEVIATGYEIGVT 96
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 37.7 bits (86), Expect = 8e-04
Identities = 17/152 (11%), Positives = 32/152 (21%), Gaps = 5/152 (3%)
Query: 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
+ V +S G V+I G T ++
Sbjct: 6 FGVAYLTAWHSLCEVGRLSPGERVLIHSAT--GGVGMAAVSIAKMIGARIYTTAGSDAKR 63
Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAV 292
+ + + I +TDG G D + G G +
Sbjct: 64 EMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA--GEAIQRGVQILAPGGRFI 121
Query: 293 TLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324
LG + + + +
Sbjct: 122 ELGKKDVYADASLGLAALAKSASFSVVDLDLN 153
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.4 bits (86), Expect = 0.002
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 1/91 (1%)
Query: 180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
A + + T + G G VGL + GA + + V +
Sbjct: 22 ASYMSILGMTPGFGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGESDGSIWNPDGIDP 80
Query: 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270
E + + + K G+ +C
Sbjct: 81 KELEDFKLQHGTILGFPKAKIYEGSILEVDC 111
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Score = 35.7 bits (81), Expect = 0.004
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK 235
V+I G+G +G S A+ + G +I G D NPE KA
Sbjct: 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV 43
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 378 | |||
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 100.0 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 100.0 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 100.0 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 100.0 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 100.0 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 100.0 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 100.0 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 100.0 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 100.0 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 100.0 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 100.0 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 100.0 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 100.0 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.98 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.98 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.97 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.97 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.97 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.96 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.95 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.95 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.95 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.95 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.95 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.95 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.94 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.94 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.94 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.94 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.94 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.93 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.93 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.93 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.93 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.92 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.92 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.92 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.92 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.92 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.92 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.92 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.92 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.92 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.91 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.91 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.9 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.9 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.9 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.88 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.87 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.83 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.82 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.69 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.65 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.53 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.0 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.86 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.84 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.81 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 97.81 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.8 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.75 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.62 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.59 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.5 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.49 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.48 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.43 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.39 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.36 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.35 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.34 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.34 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.33 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.31 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.28 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.28 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 97.27 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.27 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 97.26 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.26 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.24 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.23 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.22 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 97.22 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.22 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.21 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.17 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.16 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.16 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.11 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.1 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 97.09 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.08 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.08 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.05 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.04 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 97.04 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.04 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 97.03 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.02 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 97.02 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.01 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 96.99 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.98 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.97 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.94 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.94 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 96.94 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 96.93 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 96.92 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.91 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 96.87 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.86 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.83 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.81 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.8 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 96.8 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 96.77 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 96.76 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.71 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.66 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.66 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 96.64 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.62 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 96.58 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 96.52 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 96.49 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 96.48 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 96.45 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 96.44 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 96.41 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.4 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 96.38 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.37 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 96.34 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 96.32 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 96.32 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 96.19 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 96.16 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 96.16 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 96.11 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 96.09 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.07 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 96.05 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.04 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 96.0 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 95.99 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 95.97 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.86 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 95.76 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 95.68 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 95.66 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 95.62 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 95.61 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.55 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 95.54 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.51 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 95.48 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 95.44 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.42 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.41 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.4 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 95.37 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 95.35 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 95.24 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.14 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 95.14 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.04 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 95.03 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 95.02 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.96 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 94.86 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.83 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.8 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 94.8 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 94.75 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.64 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.62 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 94.61 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 94.61 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 94.58 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 94.53 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.47 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.45 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 94.45 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 94.42 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.42 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 94.39 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 94.36 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 94.34 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 94.11 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 94.07 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 94.0 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 93.94 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 93.93 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.83 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 93.8 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 93.8 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 93.79 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 93.79 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.77 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 93.71 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 93.68 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 93.67 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 93.66 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.65 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 93.61 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 93.61 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 93.6 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 93.59 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 93.58 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 93.55 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 93.44 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.37 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 93.32 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 93.31 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 93.3 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 93.3 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 93.15 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 93.08 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 93.08 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 93.0 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 92.98 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 92.92 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 92.82 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 92.78 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 92.75 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 92.67 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 92.6 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 92.6 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 92.58 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 92.57 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 92.56 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 92.52 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 92.51 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 92.5 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 92.43 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 92.36 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 92.29 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.24 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 92.21 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 92.2 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 92.19 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.18 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 92.14 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 92.13 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 92.11 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 92.03 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.98 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 91.98 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 91.89 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 91.86 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 91.84 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 91.61 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 91.53 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.48 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.47 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 91.44 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 91.43 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 91.39 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 91.36 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 91.3 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 91.29 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 91.25 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 91.02 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 90.93 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 90.91 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 90.9 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 90.84 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 90.83 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 90.8 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 90.79 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 90.68 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 90.53 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 90.51 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 90.51 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 90.48 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 90.47 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.46 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 90.44 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 90.36 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 90.3 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 90.16 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 90.12 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 90.11 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 90.05 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 90.02 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 89.99 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 89.74 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 89.6 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 89.51 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 89.44 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 89.31 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 89.06 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 89.05 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 88.91 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.86 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.42 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 88.19 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 88.17 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 87.89 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 87.86 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 87.84 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 87.48 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 87.39 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.37 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 87.34 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 87.32 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 87.32 | |
| d1ixka_ | 313 | Hypothetical methyltransferase PH1374 {Archaeon Py | 87.21 | |
| d2ax3a2 | 211 | Hypothetical protein TM0922, N-terminal domain {Th | 87.12 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 87.02 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 86.78 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 86.77 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 86.74 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 86.69 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 86.67 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 86.56 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 86.5 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 86.38 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 86.11 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 86.0 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 85.88 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 85.86 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 85.74 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 85.73 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.71 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 85.61 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 85.47 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 85.43 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 85.24 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 84.91 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 84.89 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 84.89 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 84.62 | |
| d1ebfa1 | 168 | Homoserine dehydrogenase {Baker's yeast (Saccharom | 84.5 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 84.41 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 84.41 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 84.22 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.09 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 83.88 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 83.85 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 83.7 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 83.68 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 83.61 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 83.45 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 83.32 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 83.3 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 83.24 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 83.09 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 83.07 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 82.96 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 82.77 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 82.54 | |
| d1p3ha_ | 99 | Chaperonin-10 (GroES) {Mycobacterium tuberculosis | 82.54 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 82.4 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 82.16 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 82.14 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 82.02 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 81.8 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 81.78 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 81.4 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 81.38 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 81.24 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 81.2 | |
| d1o58a_ | 293 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 81.04 | |
| d1fcja_ | 302 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 80.88 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 80.48 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 80.44 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 80.3 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 80.27 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 80.19 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 80.01 |
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=2.6e-38 Score=269.55 Aligned_cols=194 Identities=40% Similarity=0.636 Sum_probs=175.5
Q ss_pred cccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCC
Q 017052 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
-+.++++||++++++++|++++++++|+|+++||+|||.++|||++|++.+.|.. .+|.++|||++|+|+++|+++.
T Consensus 3 ~~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~ 82 (199)
T d1cdoa1 3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVT 82 (199)
T ss_dssp TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCC
T ss_pred CCCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCc
Confidence 4678999999999999999999999999999999999999999999999988865 6789999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
+|++||||++.+..+|+.|..|++++++.|.........-...++..+...++..++++...|+||||++++++.+++||
T Consensus 83 ~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP 162 (199)
T d1cdoa1 83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID 162 (199)
T ss_dssp SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred eecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence 99999999999999999999999999999988765543222256666777777778888778999999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF 200 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 200 (378)
++++++++|++.+++.|++.++......+.|++|||+
T Consensus 163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 9999999999999999999999777888999999984
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=100.00 E-value=2.1e-37 Score=264.91 Aligned_cols=193 Identities=39% Similarity=0.719 Sum_probs=170.9
Q ss_pred ccccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCC
Q 017052 6 KQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 6 ~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+++.+++|||++++++++|++++++++|+|+++||||||.++|||++|++.+.|.. .+|.++|||++|+|+++|++++
T Consensus 2 ~~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~~~P~v~GHE~~G~V~~vG~~V~ 81 (202)
T d1e3ia1 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVT 81 (202)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred CCCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecccccccccccccceEEeeecCCce
Confidence 57789999999999999999999999999999999999999999999999999877 6789999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccc----cccccCCCcccccccCCcccccccccceeeEEEEeCCce
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 159 (378)
+|++||||++.+...|+.|..|+.|+++.|....... .+....++..++...|.++++..+.|+|+||+++|++.+
T Consensus 82 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l 161 (202)
T d1e3ia1 82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL 161 (202)
T ss_dssp SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred eccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhE
Confidence 9999999999999999999999999999998776543 222224555667777888888888899999999999999
Q ss_pred eeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEc
Q 017052 160 VKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG 201 (378)
Q Consensus 160 ~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~G 201 (378)
++||++++++.++++.+++.+++.++ . .+++|++|.|+.
T Consensus 162 ~~lP~~~~~~~~~~~~~~~~~~~~a~-~--~~k~G~~V~vi~ 200 (202)
T d1e3ia1 162 ARVDDEFDLDLLVTHALPFESINDAI-D--LMKEGKSIRTIL 200 (202)
T ss_dssp EECCTTSCGGGGEEEEEEGGGHHHHH-H--HHHTTCCSEEEE
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH-H--hCCCCCEEEEEE
Confidence 99999999999998888888888876 2 257899987763
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=100.00 E-value=1.2e-36 Score=258.33 Aligned_cols=192 Identities=37% Similarity=0.658 Sum_probs=169.0
Q ss_pred cccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcC
Q 017052 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
..++|||++++++++|++++++|+|+|+++||||||+++|||++|++++.|.+ .+|.++|||++|+|+++|+.+..+
T Consensus 3 ~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~ 82 (197)
T d2fzwa1 3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL 82 (197)
T ss_dssp CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceec
Confidence 46889999999999999999999999999999999999999999999999865 678999999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||||++.+..+|+.|..|+.+.++.|.........-...+.......+|.+++++.+.|+|+||+++|+..++++|++
T Consensus 83 ~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~ 162 (197)
T d2fzwa1 83 KAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL 162 (197)
T ss_dssp CTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred CCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCC
Confidence 99999999999999999999999999998765543222214555556667777777777799999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF 200 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 200 (378)
++++++|.+++++.|++.++.....-+.+++|||+
T Consensus 163 l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 163 IKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp SCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred CCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 99999999999999999998544445678899874
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=100.00 E-value=2.7e-36 Score=252.84 Aligned_cols=168 Identities=23% Similarity=0.359 Sum_probs=150.5
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|.|++++++++ ++++++++|+|+++||||||+++|||++|++.+.+.. .+|.++|||++|+|+++|+++++|+
T Consensus 2 ~maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~ 80 (178)
T d1e3ja1 2 NLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK 80 (178)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred ceEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence 45666788876 9999999999999999999999999999998887643 5678999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||+..+..+|+.|..|..|+.+.|......+.. ...|+|+||+++|++.++++|+++
T Consensus 81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~--------------------~~~G~~aey~~v~~~~~~~iP~~~ 140 (178)
T d1e3ja1 81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATP--------------------PDDGNLARYYVHAADFCHKLPDNC 140 (178)
T ss_dssp TTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBT--------------------TBCCSCBSEEEEEGGGEEECCTTC
T ss_pred CCCEEEECcccccCCccccccCCccccccccceecc--------------------ccccccceeeeecccceeeCCCCC
Confidence 999999999999999999999999999887653211 113699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL 202 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga 202 (378)
+++++|.+++.+.|||+++ +++++++|++|+|+|+
T Consensus 141 ~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~ 175 (178)
T d1e3ja1 141 NVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS 175 (178)
T ss_dssp CCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred CHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence 9999999999999999997 7889999999999975
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=100.00 E-value=1.2e-35 Score=251.22 Aligned_cols=187 Identities=27% Similarity=0.503 Sum_probs=154.9
Q ss_pred cceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 11 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
.+|+|+++.+.++||++++++.|+|+++||||||.++|||++|++++.|.+ ++|.++|||++|+|+++|+++++|++|
T Consensus 2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~~~P~i~GHE~~G~V~~vG~~v~~~~vG 81 (194)
T d1f8fa1 2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVG 81 (194)
T ss_dssp EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccccCCcccccceEEEeeecCccceeEccC
Confidence 579999999999999999999999999999999999999999999999887 679999999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCccccccc-ccccccCCCcccccccCCc--ccccccccceeeEEEEeCCceeeCCCC
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKP--VYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~--~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
|||+. +..+|+.|.+|++|+++.|++.... ..|.. .+|.......... ..+..+.|+|+||++++...++++|++
T Consensus 82 DrVv~-~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~ 159 (194)
T d1f8fa1 82 DHVVL-SYGYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD 159 (194)
T ss_dssp CEEEE-CCCCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred ceeee-ecccccCChhhhCCCcccccccccceecccc-ccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence 99954 5568999999999999999975322 23333 4444333333222 234445689999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEE
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV 224 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v 224 (378)
++++++ +++.|+|++|++++|+|+.+|+.+++++
T Consensus 160 i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV 193 (194)
T d1f8fa1 160 FPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI 193 (194)
T ss_dssp CCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred CCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 987654 3456779999999999999999777765
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=2.6e-35 Score=244.72 Aligned_cols=163 Identities=21% Similarity=0.341 Sum_probs=148.6
Q ss_pred eeEEeecCCCCeEEEEeecCCC-CCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcCC
Q 017052 14 KAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 14 ~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
||++++++|+||++++++.|++ ++|||||||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++++|+
T Consensus 1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~ 80 (171)
T d1h2ba1 1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 80 (171)
T ss_dssp CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence 7999999999999999999985 68999999999999999999888765 5689999999999999999999999
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||||++.+..+|+.|..|..|+++.|...... |+. . .|+|+||+.++.+.++++|+++
T Consensus 81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~iP~~~ 139 (171)
T d1h2ba1 81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFP--GLN-I------------------DGGFAEFMRTSHRSVIKLPKDV 139 (171)
T ss_dssp TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCB--TTT-B------------------CCSSBSEEEECGGGEEECCTTC
T ss_pred CCCEEEEcCccCCCCcccccccccccccccccc--eee-c------------------ccccceeeeehhhcceecCCCC
Confidence 999999999999999999999999999887653 222 2 2599999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEE
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVI 199 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI 199 (378)
+++.++++.+++.|||+++ +.+.+ .|++|||
T Consensus 140 ~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI 170 (171)
T d1h2ba1 140 RVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI 170 (171)
T ss_dssp CCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred CHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence 9998998889999999998 66778 8999998
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=4.1e-35 Score=245.05 Aligned_cols=169 Identities=27% Similarity=0.385 Sum_probs=150.6
Q ss_pred cccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCc
Q 017052 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
+|.+|||++++++|+|++++++++|.|++|||+|||++++||++|++.+.|.+ .+|.++|||++|+|+++|+.++.
T Consensus 2 ~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~ 81 (175)
T d1llua1 2 LPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTR 81 (175)
T ss_dssp CCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred cchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccc
Confidence 68899999999999999999999999999999999999999999999998865 57899999999999999999999
Q ss_pred CCCCCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCC
Q 017052 85 FNEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163 (378)
Q Consensus 85 ~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 163 (378)
|++||||...+ ...|+.|..|..|+++.|...... |+. ..|+|+||+++++++++++|
T Consensus 82 ~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~--G~~-------------------~~gg~aey~~v~~~~~~~iP 140 (175)
T d1llua1 82 VKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT--GYS-------------------VNGGYAEYVLADPNYVGILP 140 (175)
T ss_dssp CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB--TTT-------------------BCCSSBSEEEECTTTSEECC
T ss_pred cccCCEEEeccccccCCccccccCCccccccccccc--ccc-------------------cccccceEEEechHHEEECC
Confidence 99999998764 567999999999999999887653 222 23599999999999999999
Q ss_pred CCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE
Q 017052 164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF 200 (378)
Q Consensus 164 ~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 200 (378)
++++++.++++.+++.|+++++ +. +..+|++|||+
T Consensus 141 d~l~~~~a~~~~~~~~t~~~~~-~~-g~~~G~~VLVl 175 (175)
T d1llua1 141 KNVKATIHPGKLDDINQILDQM-RA-GQIEGRIVLEM 175 (175)
T ss_dssp TTCCCCEEEECGGGHHHHHHHH-HT-TCCSSEEEEEC
T ss_pred CCCChhHHHHHHhHHHHHHHHH-Hh-CCCCCCEEEeC
Confidence 9999999988888999999876 44 44579999984
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=100.00 E-value=2.2e-35 Score=250.55 Aligned_cols=191 Identities=37% Similarity=0.678 Sum_probs=159.7
Q ss_pred cccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCc
Q 017052 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
+-..++|||++++++++|++++++++|+|+++||||||.++|||++|++++.|.. .+|.++|||++|+|+++|+++.+
T Consensus 3 ~~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~~~P~i~GHE~~G~Vv~~G~~v~~ 82 (198)
T d1p0fa1 3 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILGHEAVGVVESIGAGVTC 82 (198)
T ss_dssp TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCCEEEEEEEECTTCCS
T ss_pred CCCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccccccccccceeeeeeeeecCccccc
Confidence 3466899999999999999999999999999999999999999999999998876 78999999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
+++||||.+.+..+|+.|..|.+++++.|+.......+-...++...+...+..++.....|+|+||+++++..++++|+
T Consensus 83 ~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~ 162 (198)
T d1p0fa1 83 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP 162 (198)
T ss_dssp CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred CcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCC
Confidence 99999999999999999999999999999987765422121344444555555666666678999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHH
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGL 207 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~ 207 (378)
+++.+.++...+...+ +.++.+|||.|+|++|+
T Consensus 163 ~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl 195 (198)
T d1p0fa1 163 KINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSI 195 (198)
T ss_dssp TSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEE
T ss_pred CCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceE
Confidence 9998877655443322 33445688888888775
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.5e-34 Score=240.71 Aligned_cols=178 Identities=20% Similarity=0.290 Sum_probs=151.1
Q ss_pred ccccceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCC
Q 017052 8 PQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGV 82 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v 82 (378)
|.|.+|||+++.+++.. +++.+.+.++++|+||||||.++|||++|++.+.|.. .+|+++|||++|+|+++|+++
T Consensus 2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v 81 (192)
T d1piwa1 2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKS 81 (192)
T ss_dssp CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTC
T ss_pred CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccc
Confidence 57889999999988864 6777777777899999999999999999999998865 678999999999999999987
Q ss_pred -CcCCCCCEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCcee
Q 017052 83 -TEFNEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
Q Consensus 83 -~~~~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 160 (378)
..+++||||...+ ..+|+.|..|+.|+++.|........+.. ..| ....|+|+||++++++.++
T Consensus 82 ~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~-~~G-------------~~~~Ggfaey~~v~~~~~~ 147 (192)
T d1piwa1 82 NSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY-EDG-------------YVSQGGYANYVRVHEHFVV 147 (192)
T ss_dssp CSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBC-TTS-------------CBCCCSSBSEEEEEGGGEE
T ss_pred ccccCCCCeeeEeeeccCCCCchhhhcCCccccccccccccccc-ccc-------------cccccceeeEEEeehHHeE
Confidence 5699999997665 56799999999999999998876432211 111 2235799999999999999
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF 200 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 200 (378)
+||+++++++|+.+...+.|||+++ +++++++|++|||.
T Consensus 148 ~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~ 186 (192)
T d1piwa1 148 PIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY 186 (192)
T ss_dssp ECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence 9999999998877765678999988 78999999999985
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=100.00 E-value=8.7e-34 Score=241.40 Aligned_cols=190 Identities=36% Similarity=0.618 Sum_probs=161.2
Q ss_pred ccccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCCcC
Q 017052 8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 8 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
-.+++|||++++++++|+++++++.|+|+|+||||||.++|||++|++.+.|.. ++|.++|||++|+|+++|++++++
T Consensus 4 ~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~~~P~i~GHE~~G~Vv~vG~~v~~~ 83 (198)
T d2jhfa1 4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTV 83 (198)
T ss_dssp TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCSSBCCCCSEEEEEEEECTTCCSC
T ss_pred CCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcccccceecccceeEEEEecCccccCc
Confidence 367899999999999999999999999999999999999999999999999877 678999999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||||++.+..+|..|..|+.++.+.|.........-.+.++...+...|..+++..+.|+|+||+++|+.+++++|++
T Consensus 84 ~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p~~ 163 (198)
T d2jhfa1 84 RPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAA 163 (198)
T ss_dssp CTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECCTT
T ss_pred CCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEECCCC
Confidence 99999999999999999999999999999887654222224555556667777777777899999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF 200 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 200 (378)
++++.++...+++.+.... ...+++|++|.|+
T Consensus 164 ~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi 195 (198)
T d2jhfa1 164 FALDPLITHVLPFEKINEG---FDLLRSGESIRTI 195 (198)
T ss_dssp SCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence 9988776654444333222 2336789998876
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-34 Score=239.60 Aligned_cols=167 Identities=21% Similarity=0.297 Sum_probs=146.3
Q ss_pred ceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC------CCCcccccceeEEEEEeCCCCCcC
Q 017052 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEF 85 (378)
Q Consensus 12 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~v~~~ 85 (378)
.|+|++++++++ ++++++++|+|+++||+|||+++|||++|++.+.+.. .+|.++|||++|+|+++|+++.+|
T Consensus 7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 85 (185)
T d1pl8a1 7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL 85 (185)
T ss_dssp CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence 678999999986 9999999999999999999999999999999887532 578899999999999999999999
Q ss_pred CCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCC
Q 017052 86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 165 (378)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 165 (378)
++||||++.+..+|+.|.+|+.|+++.|......+ .. ...|+|+||++++.+++++||++
T Consensus 86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g--~~------------------~~~G~~aey~~~~~~~~~~lP~~ 145 (185)
T d1pl8a1 86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCA--TP------------------PDDGNLCRFYKHNAAFCYKLPDN 145 (185)
T ss_dssp CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETT--BT------------------TBCCSCBSEEEEEGGGEEECCTT
T ss_pred cccccceecceeccccchhhccchhchhccceeee--cc------------------cccccceEEEEEchHHEEECCCC
Confidence 99999999999999999999999999998876532 11 11358999999999999999999
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLG 203 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag 203 (378)
+++++|+.++ +.+|++++ +++++++|++||| |+|
T Consensus 146 ~~~~~aa~~p--l~~a~~a~-~~~~~~~G~~VlI-g~G 179 (185)
T d1pl8a1 146 VKPLVTHRFP--LEKALEAF-ETFKKGLGLKIML-KCD 179 (185)
T ss_dssp CGGGEEEEEE--GGGHHHHH-HHHHTTCCSEEEE-ECC
T ss_pred CCHHHHHHHH--HHHHHHHH-HHhCCCCCCEEEE-EeC
Confidence 9999987764 45677775 6778999999998 554
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.2e-33 Score=234.41 Aligned_cols=172 Identities=20% Similarity=0.259 Sum_probs=144.0
Q ss_pred cccceeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCC--
Q 017052 9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT-- 83 (378)
Q Consensus 9 ~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~-- 83 (378)
++++|||++++++++|++++++++|+|+++||||||.++|||++|++++.|.. ++|+++|||++|+|+++|+.+.
T Consensus 1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~ 80 (184)
T d1vj0a1 1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDL 80 (184)
T ss_dssp CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCT
T ss_pred CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccccc
Confidence 46789999999999999999999999999999999999999999999999876 5899999999999999999885
Q ss_pred ---cCCCCCEEEeecccCCCCCcccccCCC-CCcccccccccccccCCCcccccccCCcccccccccceeeEEEEe-CCc
Q 017052 84 ---EFNEGEHVLTVFIGECKTCRQCKSDKS-NTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGC 158 (378)
Q Consensus 84 ---~~~~Gd~V~~~~~~~~~~~~~c~~~~~-~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~-~~~ 158 (378)
++++||+|.+.+..+|+.|.+|+.|++ +.|.+....+ +. . + ........|+|+||++++ +++
T Consensus 81 ~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G--~~-~-~---------~~~~~~~~Gg~ae~~~v~~~~~ 147 (184)
T d1vj0a1 81 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG--IN-R-G---------CSEYPHLRGCYSSHIVLDPETD 147 (184)
T ss_dssp TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETT--TT-C-C---------SSSTTCCCSSSBSEEEECTTCC
T ss_pred ccccccceeeeEeccccccccChhHhCccccccCCCceeec--cC-C-C---------CCCCCCcceeCcCcEEechhHc
Confidence 468999999999999999999999986 4577765432 11 0 0 000011247999999996 579
Q ss_pred eeeCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE
Q 017052 159 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF 200 (378)
Q Consensus 159 ~~~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 200 (378)
++++|+++++++ ++.+|++++ +++++++|++|||+
T Consensus 148 v~~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~ 182 (184)
T d1vj0a1 148 VLKVSEKITHRL------PLKEANKAL-ELMESREALKVILY 182 (184)
T ss_dssp EEEECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred EEECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence 999999999764 345778887 78899999999997
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=100.00 E-value=3.9e-33 Score=233.34 Aligned_cols=164 Identities=22% Similarity=0.375 Sum_probs=140.6
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-----------CCCcccccceeEEEEEeCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------IFPRIFGHEASGIVESVGPG 81 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----------~~p~~~G~e~~G~V~~vG~~ 81 (378)
|||++++++|+|++++++++|+|++|||+|||.++|||++|++++.|.+ ++|+++|||++|+|+++|+.
T Consensus 1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~ 80 (177)
T d1jvba1 1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE 80 (177)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence 8999999999999999999999999999999999999999999998753 57899999999999999999
Q ss_pred CCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC-cee
Q 017052 82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAV 160 (378)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~ 160 (378)
+.+|++||||.+.+..+|+.|..|+.++++.|...... |.. . .|+|+||++++.. .++
T Consensus 81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~--g~~-~------------------~G~~aey~~vp~~~~~~ 139 (177)
T d1jvba1 81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL--GIN-F------------------DGAYAEYVIVPHYKYMY 139 (177)
T ss_dssp CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB--TTT-B------------------CCSSBSEEEESCGGGEE
T ss_pred ccccccCceEeeeeccccccccccccccccccCCccee--eec-c------------------ccccccEEEEEhHHeEE
Confidence 99999999999999999999999999999999987653 322 2 2599999999765 466
Q ss_pred eCCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEE
Q 017052 161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVI 199 (378)
Q Consensus 161 ~iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI 199 (378)
++|+..+.+.|+.+..++.++++++ ..+++ .|++|||
T Consensus 140 ~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI 176 (177)
T d1jvba1 140 KLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI 176 (177)
T ss_dssp ECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred ECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence 6666555544444456888999987 66666 5899987
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.98 E-value=1.4e-32 Score=228.81 Aligned_cols=165 Identities=27% Similarity=0.403 Sum_probs=141.3
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||++++++++|+++++++.|+|++|||||||+++|||++|++.+.+.. .+|.++|||++|+|+++|+.++.+++|
T Consensus 1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG 80 (171)
T d1rjwa1 1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG 80 (171)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence 8999999999999999999999999999999999999999998887643 678999999999999999999999999
Q ss_pred CEEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCC
Q 017052 89 EHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167 (378)
Q Consensus 89 d~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~ 167 (378)
|||.+.+ ...|+.|..|..+..+.|......+ .. ..|+|+||+++|+++++++|++++
T Consensus 81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~-------------------~~G~~aey~~v~~~~~~~iP~~~~ 139 (171)
T d1rjwa1 81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNAG--YS-------------------VDGGYAEYCRAAADYVVKIPDNTI 139 (171)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCTTCEEBT--TT-------------------BCCSSBSEEEEEGGGCEECCTTCC
T ss_pred eEEeeccccccccccccccCCCccccccccccc--ee-------------------ccCccccceEecHHHEEECCCCCC
Confidence 9998765 5569999999999999998876532 22 236999999999999999999999
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL 202 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga 202 (378)
++.|+ +. ...++++++ .+..+ +|++|||+|.
T Consensus 140 ~e~A~-l~-~~~~~~~~~-~~~~~-~G~tVlViG~ 170 (171)
T d1rjwa1 140 IEVQP-LE-KINEVFDRM-LKGQI-NGRVVLTLED 170 (171)
T ss_dssp EEEEE-GG-GHHHHHHHH-HTTCC-SSEEEEECCC
T ss_pred HHHHH-HH-HHHHHHHHH-HhcCC-CCCEEEEeCC
Confidence 87665 43 456777776 34455 5999999874
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.98 E-value=6.9e-35 Score=247.52 Aligned_cols=189 Identities=21% Similarity=0.254 Sum_probs=155.0
Q ss_pred eeeEEeecCCCCeEEEEeecCCC-------CCCcEEEEEeEEecCcccccccccCC--CCCcccccceeEEEEEeCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPP-------QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVT 83 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~-------~~~evlV~v~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~v~ 83 (378)
+||++++++++ +++++++.|++ .++||+|||.+++||++|++++.|.. .+|.++|||++|+|+++|++|+
T Consensus 2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~~~P~v~GHE~~G~Vv~vG~~V~ 80 (201)
T d1kola1 2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVE 80 (201)
T ss_dssp EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCCCTTCBCCCCEEEEEEEECTTCC
T ss_pred cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcccccceeccceeeeeeeccccccc
Confidence 79999999996 99999999865 46999999999999999999998877 6799999999999999999999
Q ss_pred cCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCC--ceee
Q 017052 84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVK 161 (378)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~ 161 (378)
+|++||||.+.+..+|++|..|++++++.|........+...... ......|+|+||+++|.. .+++
T Consensus 81 ~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~-----------~~~~~~Gg~aeyv~vp~~~~~l~~ 149 (201)
T d1kola1 81 NLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV-----------DMGDWTGGQAEYVLVPYADFNLLK 149 (201)
T ss_dssp SCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT-----------TSCCBCCCSBSEEEESSHHHHCEE
T ss_pred cccccceeEEeeeeeccCChhhhCCCccccccccccccccccccc-----------CCCccccccccEEEeehHHCeEEE
Confidence 999999999999999999999999999988765433211110000 001124799999999853 7999
Q ss_pred CCCCCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC
Q 017052 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218 (378)
Q Consensus 162 iP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~ 218 (378)
|||+.++.+++++...+.++++++ .....+.+. +|+|++|+.++|+||.+|+
T Consensus 150 iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g~----~g~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 150 LPDRDKAMEKINIAEVVGVQVISL-DDAPRGYGE----FDAGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp CSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred CCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence 999988888887877888888876 444444342 4889999999999999885
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.97 E-value=5.3e-34 Score=237.09 Aligned_cols=166 Identities=19% Similarity=0.155 Sum_probs=137.4
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||+++.++++ +++.++|.|.|+++||+||++++|||++|++.+.+.. .+|+++|||++|+|+++|+++++|++||
T Consensus 1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd 79 (177)
T d1jqba1 1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD 79 (177)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence 89999999997 9999999999999999999999999999998775433 6789999999999999999999999999
Q ss_pred EEEeecccCCCCCcccccCCCCCcccccccc-cccccCCCcccccccCCcccccccccceeeEEEEeC--CceeeCCCCC
Q 017052 90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS--GCAVKVSSIA 166 (378)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~--~~~~~iP~~l 166 (378)
||++.+..+|+.|..|+++..+.|....... .| ....|+|+||+++|. ..++++|+++
T Consensus 80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g-------------------~~~~G~~aEy~~vp~a~~~l~~iP~~~ 140 (177)
T d1jqba1 80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFS-------------------NFKDGVFGEYFHVNDADMNLAILPKDV 140 (177)
T ss_dssp EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBT-------------------TTBCCSSBSSEEESSHHHHCEECCTTS
T ss_pred cEEEeeeeccccccchhhhhhccccccccccccc-------------------CCCChhcCeeEEEEhhhCeEEECCCCc
Confidence 9999999999999999999999998765321 11 112369999999986 3789999999
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHH
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSV 209 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~a 209 (378)
++++++...+ +++..+ ++.+||.|+|++|+.+
T Consensus 141 ~~~~~~~~~~---~~~~~~--------~~~vlv~g~gp~gl~a 172 (177)
T d1jqba1 141 DLSKLVTHVY---HGFDHI--------EEALLLMKDKPKDLIK 172 (177)
T ss_dssp CGGGGEEEEE---ESGGGH--------HHHHHHHHHCCTTCSE
T ss_pred chHHHHHHHH---HHHHHh--------cCceEEECCCHHHhhe
Confidence 9988765432 233322 2347777887777654
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=1.2e-31 Score=223.36 Aligned_cols=163 Identities=21% Similarity=0.390 Sum_probs=133.5
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE 89 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (378)
|||++.+++++||++++++.|+|++|||||||.++|||++|++.+.|.. .+|+++|||++|+|+++|++|++|++||
T Consensus 1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd 80 (179)
T d1uufa1 1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD 80 (179)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence 8999999999999999999999999999999999999999999998865 6799999999999999999999999999
Q ss_pred EEEeec-ccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 90 HVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 90 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
||.+.+ ..+|+.|..|+.|+++.|+.......+..... .....|+|+||+++|++++++||+....
T Consensus 81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~-------------~~~~~GgfaEy~~v~~~~~~~ip~~~~~ 147 (179)
T d1uufa1 81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDE-------------PGHTLGGYSQQIVVHERYVLRIRVADIE 147 (179)
T ss_dssp EEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSST-------------TSBCCCSSBSEEEEEGGGCEECCCCCEE
T ss_pred EEEEcccccccCccccccCcccccCCCccccccccCCCC-------------CcccccccceEEEechHHEEECCCCCcC
Confidence 997765 56899999999999999998764433322011 1123479999999999999999966533
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADIS 192 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~ 192 (378)
...+ ..+.++++++ .+++++
T Consensus 148 ~~~a---~~l~~a~~a~-~~a~v~ 167 (179)
T d1uufa1 148 MIRA---DQINEAYERM-LRGDVK 167 (179)
T ss_dssp EECG---GGHHHHHHHH-HTTCSS
T ss_pred hhHh---chhHHHHHHH-HHhCcc
Confidence 3222 2456788876 444443
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.3e-30 Score=208.82 Aligned_cols=142 Identities=17% Similarity=0.264 Sum_probs=128.9
Q ss_pred ceeeEEeecCCCC--eEEE-EeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCc
Q 017052 12 TCKAAVAWGAGQP--LVVE-EVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 12 ~~~a~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
.|||++++++|+| ++++ +.+.|.|++|||+|||.+++||++|++.+.|.+ .+|.++|||++|+|+++|+++++
T Consensus 2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 81 (150)
T d1yb5a1 2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 81 (150)
T ss_dssp EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence 5999999999887 7775 689999999999999999999999999988866 45789999999999999999999
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||||++.+. ..|+|+||++++++.++++|+
T Consensus 82 ~~vGdrV~~~~~-----------------------------------------------~~G~~ae~~~v~~~~~~~iP~ 114 (150)
T d1yb5a1 82 FKKGDRVFTSST-----------------------------------------------ISGGYAEYALAADHTVYKLPE 114 (150)
T ss_dssp CCTTCEEEESCC-----------------------------------------------SSCSSBSEEEEEGGGEEECCT
T ss_pred cccCcccccccc-----------------------------------------------ccccccccccccccccccccC
Confidence 999999987521 126999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF 200 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 200 (378)
++++++||+++++..|+|+++...+..+.|+++||+
T Consensus 115 ~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL 150 (150)
T d1yb5a1 115 KLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150 (150)
T ss_dssp TCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred CCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence 999999999999999999999888889999999984
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.96 E-value=1.1e-27 Score=198.96 Aligned_cols=173 Identities=46% Similarity=0.768 Sum_probs=149.6
Q ss_pred hhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
|.+||.+.|++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++|+++
T Consensus 2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~ 81 (174)
T d1p0fa2 2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD 81 (174)
T ss_dssp CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence 56799999999999999988999999999999999999999999999999989999999999999999999999999874
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCcC
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
.+....+..+..+++++|++||++|++..+..++..+.+++|+++.+|.......+++.+..+.+++++.|+.++.+. .
T Consensus 82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~-~ 160 (174)
T d1p0fa2 82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-G 160 (174)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC-G
T ss_pred chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC-H
Confidence 343455555555555999999999998888999988876449999999887777788877666778999999887654 3
Q ss_pred CcHHHHHHHHHcCC
Q 017052 328 TDLPSLVNRYLKKE 341 (378)
Q Consensus 328 ~~~~~~~~~~~~~~ 341 (378)
++++++++++.+|+
T Consensus 161 ~d~~~lidl~~~gK 174 (174)
T d1p0fa2 161 EEVSRLVDDYMKKK 174 (174)
T ss_dssp GGHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCC
Confidence 58999999999875
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.95 E-value=3.7e-28 Score=202.25 Aligned_cols=173 Identities=32% Similarity=0.519 Sum_probs=153.7
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++++.||.++|++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.++++++++++|+++++++|+++++++
T Consensus 1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~ 80 (174)
T d1f8fa2 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS 80 (174)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence 46788999999999999999899999999999999999999999999999999788889999999999999999999998
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc-ccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 324 (378)
+ +.++.+.+++++++++|+||||+|++..++.++++++++ |+++.+|........+++...+ .+++++.|++++.+
T Consensus 81 ~--~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~ 157 (174)
T d1f8fa2 81 K--TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG 157 (174)
T ss_dssp T--TSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred C--CcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCC
Confidence 7 678999999999889999999999988999999999997 9999999866545555555443 56999999987776
Q ss_pred CcCCcHHHHHHHHHcCC
Q 017052 325 KPKTDLPSLVNRYLKKE 341 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~ 341 (378)
.++++++++++++++|+
T Consensus 158 ~~~~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 158 SPKKFIPELVRLYQQGK 174 (174)
T ss_dssp CHHHHHHHHHHHHHTTS
T ss_pred ChHHHHHHHHHHHHcCC
Confidence 66677899999999885
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.95 E-value=1.7e-27 Score=197.48 Aligned_cols=173 Identities=45% Similarity=0.812 Sum_probs=148.4
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++||.+.|++.|+|+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++.+++|+++++++|+++++++.
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~ 81 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR 81 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence 46899999999999999998899999999999999999999999999999998899999999999999999999999875
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
..+.......+...++++|++|||+|.+..++.++++++++.|+++.+|.... ...+++..++.+.++.|++++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~--~~~i~~~~~~~~k~i~Gs~~Gs~~~ 159 (174)
T d1e3ia2 82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD--EMTIPTVDVILGRSINGTFFGGWKS 159 (174)
T ss_dssp GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS--EEEEEHHHHHTTCEEEECSGGGCCH
T ss_pred cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC--ccccchHHHhccCEEEEEEeeCCCh
Confidence 43444444455555559999999999999999999999984499999998754 4455555555678999999888777
Q ss_pred CCcHHHHHHHHHcCC
Q 017052 327 KTDLPSLVNRYLKKE 341 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~ 341 (378)
.++++++++++.+||
T Consensus 160 ~~d~p~li~l~~~GK 174 (174)
T d1e3ia2 160 VDSVPNLVSDYKNKK 174 (174)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHCcC
Confidence 778999999998875
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=6.6e-28 Score=194.79 Aligned_cols=138 Identities=20% Similarity=0.241 Sum_probs=120.7
Q ss_pred eeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC---CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 14 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
+.+.++++|.| |++++.+.|.|++|||+|||+|++||++|+.++.|.+ .+|.++|||++|+|+++|+++.+|++|
T Consensus 2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 81 (147)
T d1qora1 2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG 81 (147)
T ss_dssp EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence 46889999988 9999999999999999999999999999999999876 678899999999999999999999999
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|||+.... ..|+|+||+.++.+.++++|+++++
T Consensus 82 drV~~~~~-----------------------------------------------~~G~~ae~~~v~~~~~~~~P~~~~~ 114 (147)
T d1qora1 82 DRVVYAQS-----------------------------------------------ALGAYSSVHNIIADKAAILPAAIKV 114 (147)
T ss_dssp CEEEESCC-----------------------------------------------SSCCSBSEEEEEGGGEEECCTTSCC
T ss_pred ceeeeecc-----------------------------------------------ccccceeEEEEehHHeEEcCcccch
Confidence 99975410 1369999999999999999999988
Q ss_pred hhh--hhhchhhhhhHHHHHhhcCCCCCCeEEE
Q 017052 169 EKI--CLLSCGLSAGLGAAWNVADISKGSTVVI 199 (378)
Q Consensus 169 ~~a--a~~~~~~~ta~~al~~~~~~~~g~~VLI 199 (378)
+++ +++++...++++++.+ .++++|++|||
T Consensus 115 ~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI 146 (147)
T d1qora1 115 DVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI 146 (147)
T ss_dssp CCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence 755 4556777788887754 67999999998
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.95 E-value=1.4e-28 Score=193.71 Aligned_cols=127 Identities=21% Similarity=0.211 Sum_probs=115.2
Q ss_pred eeeEEeecCCCCeEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCCCC
Q 017052 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG 88 (378)
Q Consensus 13 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (378)
|||++++++|+++++++++.|.|++|||+||++++|||++|++.+.|.+ .+|+++|||++|+| +|
T Consensus 1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG 69 (131)
T d1iz0a1 1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG 69 (131)
T ss_dssp CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence 8999999999999999999999999999999999999999999888865 57899999999999 39
Q ss_pred CEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCCCh
Q 017052 89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 168 (378)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l~~ 168 (378)
|+|++.. . .|+|+||+.++++.++++|+++++
T Consensus 70 d~V~~~~------------------------------~------------------~G~~aey~~v~~~~~~~~P~~~~~ 101 (131)
T d1iz0a1 70 RRYAALV------------------------------P------------------QGGLAERVAVPKGALLPLPEGRPV 101 (131)
T ss_dssp EEEEEEC------------------------------S------------------SCCSBSEEEEEGGGCEECCTTCCC
T ss_pred ceEEEEe------------------------------c------------------cCccceeeeeCHHHeEEccCCCCH
Confidence 9998762 1 259999999999999999999999
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIF 200 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~ 200 (378)
++||++++.+.|||++|.+++ +.|++||++
T Consensus 102 ~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l 131 (131)
T d1iz0a1 102 VGPVFPFAEAEAAFRALLDRG--HTGKVVVRL 131 (131)
T ss_dssp EEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence 999999999999999996655 559999863
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.95 E-value=3.7e-27 Score=195.68 Aligned_cols=170 Identities=30% Similarity=0.475 Sum_probs=147.5
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+|+|+|+.++++++|||+++ +.+++++|++|||+|+|++|++++|+||.+|+++|++++++++|++.++++|+++++++
T Consensus 1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~ 79 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY 79 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence 57899999999999999997 77999999999999999999999999999999889999999999999999999999999
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccccc---ccccEEEEeee
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---LSGRTLKGSLF 321 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~ 321 (378)
+ ++++.+.+++++++ ++|+||||+|++..++.++++++++ |+++.+|.......+.++...+ .+++++.+...
T Consensus 80 ~--~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 156 (174)
T d1jqba2 80 K--NGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC 156 (174)
T ss_dssp G--GSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred c--chhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence 7 67888999999988 8999999999988899999999997 9999999887666666554432 45778887765
Q ss_pred ccCCcCCcHHHHHHHHHcCC
Q 017052 322 GGWKPKTDLPSLVNRYLKKE 341 (378)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~ 341 (378)
... +..++++++++.+|+
T Consensus 157 ~~~--r~~~e~l~~li~~gk 174 (174)
T d1jqba2 157 PGG--RLRAERLRDMVVYNR 174 (174)
T ss_dssp CCH--HHHHHHHHHHHHTTS
T ss_pred CCC--cccHHHHHHHHHcCC
Confidence 442 234677888888764
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.95 E-value=9.5e-28 Score=194.87 Aligned_cols=145 Identities=19% Similarity=0.185 Sum_probs=123.7
Q ss_pred cceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
.+|||+++.+++++ ++++++++|+|++|||||||+++|||++|+..+.|.+ ..|.++|+|++|+|++ ..+..
T Consensus 2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~ 79 (152)
T d1xa0a1 2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPR 79 (152)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSS
T ss_pred CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCc
Confidence 46999999999987 5578999999999999999999999999998888865 5789999999999999 45678
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||+|+...... + ....|+|+||+++|++.++++|+
T Consensus 80 ~~~g~~v~~~~~~~-----------------------~-------------------~~~~G~~aEy~~v~~~~~~~iP~ 117 (152)
T d1xa0a1 80 FREGDEVIATGYEI-----------------------G-------------------VTHFGGYSEYARLHGEWLVPLPK 117 (152)
T ss_dssp CCTTCEEEEESTTB-----------------------T-------------------TTBCCSSBSEEEECGGGCEECCT
T ss_pred cccCCEEEEecCcc-----------------------c-------------------cccCCCcceeeeehhhccccCCC
Confidence 99999998662110 0 01236999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEc
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG 201 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~G 201 (378)
+++ ++||+++++..|||.++..+.+++ |++|||+|
T Consensus 118 ~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~ 152 (152)
T d1xa0a1 118 GLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA 152 (152)
T ss_dssp THH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred CCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence 998 578889999999999988888886 99999975
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.94 E-value=1.1e-26 Score=193.91 Aligned_cols=174 Identities=48% Similarity=0.851 Sum_probs=147.2
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++|+||.++|++.|+|+++.+++++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++++++++
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~ 81 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence 57899999999999999998889999999999999999999999999999988999999999999999999999999986
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC-CCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL-KPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
+......+.++..+++++|+|||++|++..++.+..+++++ ++++.++.... .......+..+.+++++.|+.++++.
T Consensus 82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~ 160 (176)
T d2fzwa2 82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK 160 (176)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence 54456666677766669999999999988888888888886 78777654433 33334444445678999999888776
Q ss_pred cCCcHHHHHHHHHcCC
Q 017052 326 PKTDLPSLVNRYLKKE 341 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~ 341 (378)
..++++++++++.+||
T Consensus 161 ~~~d~~~li~l~~~GK 176 (176)
T d2fzwa2 161 SVESVPKLVSEYMSKK 176 (176)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 6678999999998875
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.94 E-value=3.5e-27 Score=198.24 Aligned_cols=173 Identities=18% Similarity=0.217 Sum_probs=147.7
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~ 247 (378)
+|||+++++++|||++|.+.+++++|++|||+|+ |++|++++|+|+.+|+ +++++++++++.+.++++|++++++++
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~- 78 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSR- 78 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETT-
T ss_pred CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCC-
Confidence 5899999999999999999999999999999987 9999999999999999 899999999999999999999999987
Q ss_pred CCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC-
Q 017052 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK- 325 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~- 325 (378)
+.++.+.+++++++ ++|++|||+|+ +.++.++++++++ |+++.+|..............+.++.++.++......
T Consensus 79 -~~~~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (183)
T d1pqwa_ 79 -SVDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK 155 (183)
T ss_dssp -CSTHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred -ccCHHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence 77899999999988 99999999998 6889999999997 9999999766544444444555678888877543211
Q ss_pred -----cCCcHHHHHHHHHcCCCCCCc
Q 017052 326 -----PKTDLPSLVNRYLKKEFMVDE 346 (378)
Q Consensus 326 -----~~~~~~~~~~~~~~~~~~~~~ 346 (378)
.++.++++++++.+|++++.|
T Consensus 156 ~~~~~~~~~~~~v~~~i~~G~i~p~P 181 (183)
T d1pqwa_ 156 LQPARYRQLLQHILQHVADGKLEVLP 181 (183)
T ss_dssp HCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred cCHHHHHHHHHHHHHHHHCCCCceeC
Confidence 024577888999999987653
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.94 E-value=1.7e-26 Score=192.05 Aligned_cols=173 Identities=45% Similarity=0.754 Sum_probs=150.0
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
.++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|+.++|+|+++|+.+||+++.+++|+++++++|+++++|+
T Consensus 2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~ 81 (176)
T d1d1ta2 2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP 81 (176)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence 35899999999999999999889999999999999999999999999999998799999999999999999999999998
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
++. ....+.+.+.+.+ ++|++||++|++..+..++..+.+++|+++.+|.......+.+.+..++++.++.|++++..
T Consensus 82 ~~~-~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~ 160 (176)
T d1d1ta2 82 KDS-TKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGL 160 (176)
T ss_dssp GGC-SSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred ccc-chHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCC
Confidence 742 2334556666666 99999999999888888888887655999999998877777777777778999999998877
Q ss_pred CcCCcHHHHHHHHHc
Q 017052 325 KPKTDLPSLVNRYLK 339 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~ 339 (378)
.++++++++++++.+
T Consensus 161 ~~~~dip~li~~~~~ 175 (176)
T d1d1ta2 161 KSRDDVPKLVTEFLA 175 (176)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHhC
Confidence 777788888887653
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=6.8e-27 Score=194.69 Aligned_cols=166 Identities=18% Similarity=0.223 Sum_probs=142.7
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+|+++||+++++++|||++|.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|+++++|
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~ 79 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN 79 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence 6899999999999999999988899999999999997 9999999999999999 8999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 322 (378)
++ +.++.+.+++.+++ ++|+|||++|+ ..++.++++++++ |+++.+|.... .++++.. +.+++++.|+.+.
T Consensus 80 ~~--~~~~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~---~~~~~~~~~~k~~~i~g~~~~ 152 (174)
T d1yb5a2 80 HR--EVNYIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRGT---IEINPRDTMAKESSIIGVTLF 152 (174)
T ss_dssp TT--STTHHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCSC---EEECTHHHHTTTCEEEECCGG
T ss_pred cc--cccHHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC-CEEEEEecCCC---CCCCHHHHHHCCCEEEEEEec
Confidence 97 67899999999988 89999999996 6889999999997 99999986542 3333333 3569999998764
Q ss_pred cCCcCCcHHHHHHHHHcC
Q 017052 323 GWKPKTDLPSLVNRYLKK 340 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~ 340 (378)
... .+++++++++++++
T Consensus 153 ~~~-~~~~~~~~~~l~~g 169 (174)
T d1yb5a2 153 SST-KEEFQQYAAALQAG 169 (174)
T ss_dssp GCC-HHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHH
Confidence 432 34677777777654
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.94 E-value=3.5e-26 Score=190.70 Aligned_cols=175 Identities=49% Similarity=0.888 Sum_probs=146.0
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++||.++|+++|||+++.+.+++++|++|||+|+|++|++++|+++.+|+.+|++++++++|+++++++|+++++++.
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~ 81 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence 57899999999999999998999999999999999999999999999999988999999999999999999999999876
Q ss_pred CCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCCc
Q 017052 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 326 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
+.+....+..+...++++|++||++|.+..++.++..+++++|.++..+...........+..+++++++.|+.++...+
T Consensus 82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~ 161 (176)
T d2jhfa2 82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS 161 (176)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCH
Confidence 43444444555555559999999999988889999999886345555555444445555555667899999998877766
Q ss_pred CCcHHHHHHHHHcCC
Q 017052 327 KTDLPSLVNRYLKKE 341 (378)
Q Consensus 327 ~~~~~~~~~~~~~~~ 341 (378)
+++++++++++.+|+
T Consensus 162 ~~~~~~li~~~~~GK 176 (176)
T d2jhfa2 162 KDSVPKLVADFMAKK 176 (176)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHCcC
Confidence 778999999998875
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=7.4e-26 Score=189.73 Aligned_cols=170 Identities=25% Similarity=0.337 Sum_probs=144.5
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+++.+|.+.|+.+|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++++++++
T Consensus 2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~ 81 (182)
T d1vj0a2 2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR 81 (182)
T ss_dssp CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence 35678899999999999998888999999999999999999999999999987899999999999999999999999887
Q ss_pred CCC-chHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc--ccccccEEEEeeec
Q 017052 247 DNN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG--LFLSGRTLKGSLFG 322 (378)
Q Consensus 247 ~~~-~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~--~~~~~~~i~g~~~~ 322 (378)
+.+ .+..+.+.+++.+ ++|+||||+|++..++.++++++++ |+++.+|....+.++++.+. .+.+++++.|++.+
T Consensus 82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~ 160 (182)
T d1vj0a2 82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVS 160 (182)
T ss_dssp TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCC
T ss_pred ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeC
Confidence 322 2345567888877 8999999999988899999999997 99999998766566665543 34679999998765
Q ss_pred cCCcCCcHHHHHHHHHcC
Q 017052 323 GWKPKTDLPSLVNRYLKK 340 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~ 340 (378)
. .++++++++++.++
T Consensus 161 ~---~~~~~~~~~~i~~~ 175 (182)
T d1vj0a2 161 D---TSHFVKTVSITSRN 175 (182)
T ss_dssp C---HHHHHHHHHHHHTC
T ss_pred C---HHHHHHHHHHHHHC
Confidence 3 35788888888776
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.93 E-value=4.4e-26 Score=189.08 Aligned_cols=168 Identities=24% Similarity=0.270 Sum_probs=148.5
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
|++.|||.++|++.|||+++ ++.++++|++|||+|+ |++|++++|+++.+|..+|++++++++|++.++++|++++++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~ 79 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN 79 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence 57899999999999999998 7789999999999996 999999999999999779999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeecc
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
++ +.++.+.+++.+.+ ++|++|||+|++..++.++++++++ |+++.+|....+..++.... +++++++.|++.+.
T Consensus 80 ~~--~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~i~i~Gs~~~~ 155 (170)
T d1jvba2 80 AS--MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYHAPLI-TLSEIQFVGSLVGN 155 (170)
T ss_dssp TT--TSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCCCCCHHHH-HHHTCEEEECCSCC
T ss_pred cC--CcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCccccCHHHH-HhCCcEEEEEecCC
Confidence 87 67788888888877 8999999999988899999999997 99999998876555554443 46799999987654
Q ss_pred CCcCCcHHHHHHHHHcCC
Q 017052 324 WKPKTDLPSLVNRYLKKE 341 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~ 341 (378)
+++++++++++++|+
T Consensus 156 ---~~d~~~~l~lv~~GK 170 (170)
T d1jvba2 156 ---QSDFLGIMRLAEAGK 170 (170)
T ss_dssp ---HHHHHHHHHHHHTTS
T ss_pred ---HHHHHHHHHHHHcCC
Confidence 457999999999885
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.93 E-value=3.8e-25 Score=184.22 Aligned_cols=173 Identities=46% Similarity=0.879 Sum_probs=142.2
Q ss_pred ChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++++++..|+.+|++++++++|++.++++|+++++|++
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~ 81 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 81 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence 57899999999999999998899999999999999999999999999999988999999999999999999999999986
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
+. .++.+.+...+.+ ++|++||++|+...+..++.++.++++.++..+........ ..+..+.+++++.|+.++.+.
T Consensus 82 ~~-~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~-~~~~~~~~~~~i~Gs~~G~~~ 159 (175)
T d1cdoa2 82 DH-SEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVA-TRPIQLIAGRTWKGSMFGGFK 159 (175)
T ss_dssp GC-SSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEE-ECHHHHHTTCEEEECSGGGCC
T ss_pred Cc-chhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccC-ccHHHHHCCcEEEEEEEeCCc
Confidence 42 2344455555545 99999999999888888888888763445555554433333 333444678999999888776
Q ss_pred cCCcHHHHHHHHHcCC
Q 017052 326 PKTDLPSLVNRYLKKE 341 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~ 341 (378)
++++++++++++.+|+
T Consensus 160 ~~~d~~~~i~l~~~gK 175 (175)
T d1cdoa2 160 GKDGVPKMVKAYLDKK 175 (175)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 6678999999999875
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7.2e-25 Score=181.76 Aligned_cols=168 Identities=23% Similarity=0.330 Sum_probs=139.7
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+|+|+||.+. ++++||+++ +++++++|++|+|+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus 1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~ 78 (171)
T d1pl8a2 1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI 78 (171)
T ss_dssp SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence 5789998774 788999997 78899999999999999999999999999999889999999999999999999999988
Q ss_pred CCCCchHHHHHH--HHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeec
Q 017052 246 NDNNEPVQQVIK--RITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 246 ~~~~~~~~~~i~--~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
++ .+..+..+ ..+.+ ++|+||||+|++..++.++++++++ |+++.+|.+.....+++... +.+++++.|++..
T Consensus 79 ~~--~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~~~~~~~~~~-~~k~l~i~Gs~~~ 154 (171)
T d1pl8a2 79 SK--ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVPLLHA-AIREVDIKGVFRY 154 (171)
T ss_dssp SS--CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCCCCHHHH-HHTTCEEEECCSC
T ss_pred cc--cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCCCCccCHHHH-HHCCcEEEEEeCC
Confidence 73 33333222 22334 8999999999988999999999997 99999998776555554433 3579999988532
Q ss_pred cCCcCCcHHHHHHHHHcCCCC
Q 017052 323 GWKPKTDLPSLVNRYLKKEFM 343 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~ 343 (378)
.++++++++++.+|+++
T Consensus 155 ----~~~~~~al~li~~gkid 171 (171)
T d1pl8a2 155 ----CNTWPVAISMLASKSVN 171 (171)
T ss_dssp ----SSCHHHHHHHHHTTSCC
T ss_pred ----HhHHHHHHHHHHcCCCC
Confidence 35799999999999864
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1.4e-25 Score=187.57 Aligned_cols=130 Identities=22% Similarity=0.254 Sum_probs=121.4
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+|+++||+++++++|||++|.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|+++++|
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~ 79 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN 79 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence 5899999999999999999988889999999999977 8899999999999999 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
++ ++++.+.+++++++ ++|+|+|++|+ +.+..++.+++++ |+++.++.....
T Consensus 80 ~~--~~d~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~ 132 (179)
T d1qora2 80 YR--EEDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSGA 132 (179)
T ss_dssp TT--TSCHHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTCC
T ss_pred CC--CCCHHHHHHHHhCCCCeEEEEeCccH-HHHHHHHHHHhcC-CeeeecccccCC
Confidence 98 67899999999988 99999999987 6889999999997 999999877653
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.92 E-value=5.2e-25 Score=181.79 Aligned_cols=165 Identities=21% Similarity=0.270 Sum_probs=139.7
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+++++||.++|++.|||+++ +++++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|++.++++|+++++++
T Consensus 1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 78 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA 78 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence 57999999999999999998 67899999999999999999999999999998 99999999999999999999999998
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
+ +.++.+.+++.+. +++.+++++++++.+..++++++++ |+++.+|.......+++... +.+++++.|+..+.
T Consensus 79 ~--~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~~~i~Gs~~~~-- 151 (166)
T d1llua2 79 R--QEDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGDFPTPIFDV-VLKGLHIAGSIVGT-- 151 (166)
T ss_dssp T--TSCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCSSEEEEEHHHH-HHTTCEEEECCSCC--
T ss_pred c--chhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecCCCccCCHHHH-HhCCcEEEEEeecC--
Confidence 7 5677777877665 4666666777778999999999997 99999997665434443322 35699999987654
Q ss_pred cCCcHHHHHHHHHcC
Q 017052 326 PKTDLPSLVNRYLKK 340 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~ 340 (378)
+++++++++++.+|
T Consensus 152 -~~d~~e~l~l~~~G 165 (166)
T d1llua2 152 -RADLQEALDFAGEG 165 (166)
T ss_dssp -HHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHHHCc
Confidence 45789999998887
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.92 E-value=1.6e-25 Score=185.00 Aligned_cols=170 Identities=15% Similarity=0.133 Sum_probs=130.1
Q ss_pred CChhhhhhhchhhhhhHHHH---HhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 166 APLEKICLLSCGLSAGLGAA---WNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al---~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|++|||+++++++|||+++ .+....++|++|||+|+ |++|.+++|+|+.+|+ +|+++.+++++.++++++|+++
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~ 79 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE 79 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence 68999999999999999764 45677889999999987 9999999999999999 8999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEee
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL 320 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 320 (378)
+++++ ..+.+.++...++++|+|||++|+ +.+..++++|+++ |+++.+|...+ ....++... +++++++.|..
T Consensus 80 vi~~~---~~~~~~~~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~-Griv~~G~~~g-~~~~~~~~~~~~k~~~i~Gv~ 153 (176)
T d1xa0a2 80 VLARE---DVMAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGG-AEVPTTVHPFILRGVSLLGID 153 (176)
T ss_dssp EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSS-SCCCCCSHHHHHTTCEEEECC
T ss_pred eeecc---hhHHHHHHHhhccCcCEEEEcCCc-hhHHHHHHHhCCC-ceEEEeecccC-cccCCCHHHHHHCCcEEEEEe
Confidence 99985 234444444444499999999998 6899999999997 99999998754 233333333 35699999874
Q ss_pred eccCCcCCcHHHHHHHHHcCCCCC
Q 017052 321 FGGWKPKTDLPSLVNRYLKKEFMV 344 (378)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~ 344 (378)
... .+.++..++++.+ .++++|
T Consensus 154 ~~~-~~~~~~~~~~~~l-ag~lkP 175 (176)
T d1xa0a2 154 SVY-CPMDLRLRIWERL-AGDLKP 175 (176)
T ss_dssp SSS-CCHHHHHHHHHHH-HTTTCC
T ss_pred CCc-CCHHHHHHHHHHH-hcccCC
Confidence 322 2234455666665 366654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.92 E-value=2e-24 Score=178.93 Aligned_cols=167 Identities=24% Similarity=0.315 Sum_probs=136.9
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+|+|+||.+. ++++||+++ +++++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++++|++..+++
T Consensus 1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~ 77 (170)
T d1e3ja2 1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV 77 (170)
T ss_dssp SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence 5789998774 788999997 78899999999999999999999999999999 99999999999999999999987765
Q ss_pred CCCCch---HHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeec
Q 017052 246 NDNNEP---VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322 (378)
Q Consensus 246 ~~~~~~---~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
+....+ ..+.+++..++++|+||||+|++..++.++++++++ |+++.+|.+.....+++... +.+++++.|++..
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~-~~k~i~i~gs~~~ 155 (170)
T d1e3ja2 78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVPLVNA-CAREIDIKSVFRY 155 (170)
T ss_dssp CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCCCCHHHH-HTTTCEEEECCSC
T ss_pred cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCCCCCcCHHHH-HHCCCEEEEEECC
Confidence 432333 334455544558999999999988899999999997 99999998765444444332 3569999987532
Q ss_pred cCCcCCcHHHHHHHHHcCC
Q 017052 323 GWKPKTDLPSLVNRYLKKE 341 (378)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~ 341 (378)
.++++++++++++|+
T Consensus 156 ----~~~~~~ai~li~~Gk 170 (170)
T d1e3ja2 156 ----CNDYPIALEMVASGR 170 (170)
T ss_dssp ----SSCHHHHHHHHHTTS
T ss_pred ----HHHHHHHHHHHHcCC
Confidence 357999999999885
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.3e-25 Score=178.75 Aligned_cols=129 Identities=19% Similarity=0.162 Sum_probs=108.5
Q ss_pred eeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCcCC
Q 017052 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN 86 (378)
Q Consensus 13 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (378)
|||+++.+++++ +++++++.|+|++|||+|||.|+|||++|.....|.+ .+|.++|+|++|+|+++|. ..++
T Consensus 1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~ 78 (146)
T d1o89a1 1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH 78 (146)
T ss_dssp CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence 899999999987 7789999999999999999999999999998888865 5788999999999999876 4789
Q ss_pred CCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCCCC
Q 017052 87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166 (378)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~l 166 (378)
+||+|+..... .| ....|+|+||+++|+++++++|+++
T Consensus 79 ~g~~v~~~~~~-----------------------~g-------------------~~~~G~~Aey~~v~~~~vv~lP~~l 116 (146)
T d1o89a1 79 AGQEVLLTGWG-----------------------VG-------------------ENHWGGLAEQARVKGDWLVAMPQGQ 116 (146)
T ss_dssp TTCEEEEECTT-----------------------BT-------------------TTBCCSSBSEEEECGGGCEECCTTS
T ss_pred ceeeEEeeccc-----------------------ce-------------------ecCCCcceeeeeeeeeeEEECCCCC
Confidence 99999876211 01 1124699999999999999999999
Q ss_pred ChhhhhhhchhhhhhHHHH
Q 017052 167 PLEKICLLSCGLSAGLGAA 185 (378)
Q Consensus 167 ~~~~aa~~~~~~~ta~~al 185 (378)
|+++||+++++..||+.++
T Consensus 117 s~~eAA~l~~a~~tA~~~~ 135 (146)
T d1o89a1 117 AAKEISLSEAPNFAEAIIN 135 (146)
T ss_dssp CCEEECGGGHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999998888886543
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.92 E-value=1.2e-24 Score=179.89 Aligned_cols=168 Identities=25% Similarity=0.332 Sum_probs=143.3
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
+|+|+||++++++.|||+++ +.+++++|++|||+|+|++|++++|+|+..|+ +|++++++++|++.++++|++.++++
T Consensus 1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~ 78 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence 68999999999999999998 67899999999999999999999999999999 89999999999999999999999998
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
. +.++.+.+++.+.+..|+| ++.+++..+..++++++++ |+++.+|....+..+++... +.+++++.|+....
T Consensus 79 ~--~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~~~~~~~~~~~-~~~~~~i~gs~~~~-- 151 (168)
T d1rjwa2 79 L--KEDAAKFMKEKVGGVHAAV-VTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFDT-VLNGIKIIGSIVGT-- 151 (168)
T ss_dssp T--TSCHHHHHHHHHSSEEEEE-ESSCCHHHHHHHHHHEEEE-EEEEECCCCSSEEEEEHHHH-HHTTCEEEECCSCC--
T ss_pred c--cchhhhhcccccCCCceEE-eecCCHHHHHHHHHHhccC-CceEecccccCCCCCCHHHH-HHCCcEEEEEeeCC--
Confidence 8 6678888888887654555 5556668899999999997 99999998765444443332 36699999887543
Q ss_pred cCCcHHHHHHHHHcCCCC
Q 017052 326 PKTDLPSLVNRYLKKEFM 343 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~ 343 (378)
+++++++++++.+|+++
T Consensus 152 -~~~~~~~l~l~~~Gkik 168 (168)
T d1rjwa2 152 -RKDLQEALQFAAEGKVK 168 (168)
T ss_dssp -HHHHHHHHHHHHTTSCC
T ss_pred -HHHHHHHHHHHHhCCCC
Confidence 46799999999999874
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.92 E-value=1.4e-24 Score=180.11 Aligned_cols=165 Identities=20% Similarity=0.273 Sum_probs=139.2
Q ss_pred hhhhhhhchhhhhhHHHHHhhc-CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC
Q 017052 168 LEKICLLSCGLSAGLGAAWNVA-DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246 (378)
Q Consensus 168 ~~~aa~~~~~~~ta~~al~~~~-~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~ 246 (378)
+.++|.++|+++|||++|.+.. .+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++++++++
T Consensus 6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~ 85 (172)
T d1h2ba2 6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR 85 (172)
T ss_dssp HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence 5788999999999999997655 489999999999999999999999999987899999999999999999999999986
Q ss_pred CCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeeccCC
Q 017052 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325 (378)
Q Consensus 247 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 325 (378)
+ +..+.+.+.+.+ ++|+||||+|+...++.++++++++ |+++.+|... +..++... .+.+++++.|++.+.
T Consensus 86 --~-~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~-~~~~~~~~-l~~k~~~i~Gs~~~~-- 157 (172)
T d1h2ba2 86 --R-DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG-ELRFPTIR-VISSEVSFEGSLVGN-- 157 (172)
T ss_dssp --S-CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS-CCCCCHHH-HHHTTCEEEECCSCC--
T ss_pred --c-cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc-cccCCHHH-HHhCCcEEEEEEecC--
Confidence 3 445556677777 9999999999988899999999997 9999999643 23333332 235699999997654
Q ss_pred cCCcHHHHHHHHHcCC
Q 017052 326 PKTDLPSLVNRYLKKE 341 (378)
Q Consensus 326 ~~~~~~~~~~~~~~~~ 341 (378)
+++++++++++++|+
T Consensus 158 -~~d~~~~l~l~~~GK 172 (172)
T d1h2ba2 158 -YVELHELVTLALQGK 172 (172)
T ss_dssp -HHHHHHHHHHHHTTS
T ss_pred -HHHHHHHHHHHHcCC
Confidence 357899999999885
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.92 E-value=1e-26 Score=190.86 Aligned_cols=149 Identities=18% Similarity=0.175 Sum_probs=124.7
Q ss_pred cceeeEEeecCCCC--eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC----CCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
.+|||+++++++.+ +++++++.|+|++|||||||+|+|||++|++.+.|.+ .+|.++|+|++|+|++ +.+..
T Consensus 2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~ 79 (162)
T d1tt7a1 2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR 79 (162)
T ss_dssp CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence 47999999998865 9999999999999999999999999999999888866 4567999999999998 45678
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
+++||+|+..... .| ....|+|+||+.+|++.++++|+
T Consensus 80 ~~~g~~v~~~~~~-----------------------~g-------------------~~~~G~~aey~~v~~~~l~~iP~ 117 (162)
T d1tt7a1 80 FAEGDEVIATSYE-----------------------LG-------------------VSRDGGLSEYASVPGDWLVPLPQ 117 (162)
T ss_dssp CCTTCEEEEESTT-----------------------BT-------------------TTBCCSSBSSEEECGGGEEECCT
T ss_pred cccceeeEeeecc-----------------------ce-------------------eccccccceEEEecHHHEEECCC
Confidence 9999999876321 01 11236999999999999999999
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-Ch
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GT 204 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~ 204 (378)
++++++||.+++..+|||.++. ......+++|||+|+ |.
T Consensus 118 ~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga~G~ 157 (162)
T d1tt7a1 118 NLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGR 157 (162)
T ss_dssp TCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCCSSE
T ss_pred CCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCcce
Confidence 9999999999999999998753 334555678888877 53
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.92 E-value=4.8e-27 Score=195.91 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=127.3
Q ss_pred cceeeEEeecCCCC-----eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCC-------------CCCccccccee
Q 017052 11 ITCKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFPRIFGHEAS 72 (378)
Q Consensus 11 ~~~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-------------~~p~~~G~e~~ 72 (378)
.+|||+++.++|+| ++..+++.|+|+++||||||++++||++|++.+.|.+ .+|.++|+|++
T Consensus 2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~ 81 (175)
T d1gu7a1 2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL 81 (175)
T ss_dssp EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence 58999999999987 4455777788899999999999999999999887754 35678899999
Q ss_pred EEEEEeCCCCCcCCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEE
Q 017052 73 GIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT 152 (378)
Q Consensus 73 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~ 152 (378)
|+|++.|..+..++.||+|..... ..|+|+||+
T Consensus 82 g~V~~~~~~~~~~~~g~~v~~~~~-----------------------------------------------~~g~~aey~ 114 (175)
T d1gu7a1 82 FEVIKVGSNVSSLEAGDWVIPSHV-----------------------------------------------NFGTWRTHA 114 (175)
T ss_dssp EEEEEECTTCCSCCTTCEEEESSS-----------------------------------------------CCCCSBSEE
T ss_pred cccccccccccccccccceecccc-----------------------------------------------cccccccee
Confidence 999999999999999999976521 125899999
Q ss_pred EEeCCceeeCCCCCChhhhhhhchhhhhhHHHHHh-hcCCCCCCeEEEEc-c-ChHHHHHHH
Q 017052 153 VVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN-VADISKGSTVVIFG-L-GTVGLSVAQ 211 (378)
Q Consensus 153 ~v~~~~~~~iP~~l~~~~aa~~~~~~~ta~~al~~-~~~~~~g~~VLI~G-a-g~vG~~aiq 211 (378)
++|+++++++|++++.+.+ +.+...|||+++.. ..++++|++|||+| + |++|++++|
T Consensus 115 ~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 115 LGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp EEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred eehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence 9999999999998754444 45577899988753 46799999999997 4 679998876
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.91 E-value=3.9e-25 Score=182.73 Aligned_cols=166 Identities=19% Similarity=0.194 Sum_probs=137.5
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++.+.||.+.|+..|+|+++ +++++++|++|||+|+|++|++++|+||.+|+ +|++++++++|++.++++|+++++++
T Consensus 1 lp~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~ 78 (168)
T d1piwa2 1 IPSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIAT 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeec
Confidence 35677999999999999998 67899999999999999999999999999999 89999999999999999999999987
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChH--HHHHHHHHhccCCccEEEeccCCCCCeeeccccccccccEEEEeeecc
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTG--MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
.+ +.++.+ ...+++|+++||+++.. .+..++++++++ |+++.+|.......+++.+.. ++++++.|+..++
T Consensus 79 ~~-~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~-~k~~~i~Gs~~g~ 151 (168)
T d1piwa2 79 LE-EGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLKPYG-LKAVSISYSALGS 151 (168)
T ss_dssp GG-TSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEECGGG-CBSCEEEECCCCC
T ss_pred cc-hHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHHHHH-hCCcEEEEEeeCC
Confidence 53 223322 22348999999988643 466789999997 999999987766666655543 5799999987654
Q ss_pred CCcCCcHHHHHHHHHcCCCC
Q 017052 324 WKPKTDLPSLVNRYLKKEFM 343 (378)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~ 343 (378)
+++++++++++.+|+++
T Consensus 152 ---~~~~~e~l~li~~gkIk 168 (168)
T d1piwa2 152 ---IKELNQLLKLVSEKDIK 168 (168)
T ss_dssp ---HHHHHHHHHHHHHTTCC
T ss_pred ---HHHHHHHHHHHHhCCCC
Confidence 46899999999999874
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.91 E-value=2e-24 Score=180.92 Aligned_cols=164 Identities=20% Similarity=0.244 Sum_probs=133.3
Q ss_pred hhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
++++++++|||++|.+.+++++|++|||+|+ |++|++++|+||..|+ +||++++++++.++++++|++++++++ ++
T Consensus 8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~--~~ 84 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYK--TV 84 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETT--SC
T ss_pred HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhcccc--cc
Confidence 4677889999999999999999999999988 8999999999999999 999999999999999999999999987 66
Q ss_pred hHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-----Ceeecccc-ccccccEEEEeeecc
Q 017052 251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-----PEVAAHYG-LFLSGRTLKGSLFGG 323 (378)
Q Consensus 251 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~-~~~~~~~i~g~~~~~ 323 (378)
++.+.+.+.+.+ ++|+|||++|+ +.+..++++++++ |+++.+|..... ....+.+. .+.+++++.|++...
T Consensus 85 ~~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~ 162 (182)
T d1v3va2 85 NSLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR 162 (182)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred cHHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence 777777777766 99999999996 7899999999997 999999965321 11222222 235689999987665
Q ss_pred CCc---CCcHHHHHHHHHcC
Q 017052 324 WKP---KTDLPSLVNRYLKK 340 (378)
Q Consensus 324 ~~~---~~~~~~~~~~~~~~ 340 (378)
+.. .+.++++++++.+|
T Consensus 163 ~~~~~~~~~~~~l~~~i~~G 182 (182)
T d1v3va2 163 WQGDVREKALRDLMKWVLEG 182 (182)
T ss_dssp CCHHHHHHHHHHHHHHHHTT
T ss_pred cChHHHHHHHHHHHHHHhCc
Confidence 432 12356666776654
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=2e-24 Score=178.46 Aligned_cols=164 Identities=20% Similarity=0.271 Sum_probs=131.8
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
.+++.+|.+.|+..|+|+++ +++++++|++|||+|+|++|++++|+||.+|+ ++++++++++++++++++|+++++++
T Consensus 4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~ 81 (168)
T d1uufa2 4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS 81 (168)
T ss_dssp GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence 45678888999999999998 68999999999999999999999999999999 78889999999999999999999998
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeecccc-ccccccEEEEeeeccC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGW 324 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~ 324 (378)
. +.+... ...+++|++||++|++..+..++.+++++ |+++.+|..... ...+... .+.+++++.|+..+.
T Consensus 82 ~--~~~~~~----~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~l~~k~~~i~Gs~~~~- 152 (168)
T d1uufa2 82 R--NADEMA----AHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMKRRAIAGSMIGG- 152 (168)
T ss_dssp T--CHHHHH----TTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC-
T ss_pred c--hhhHHH----HhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCC-cccccHHHHHHCCcEEEEEeecC-
Confidence 6 333221 11238999999999877899999999997 999999976543 2233332 235799999987654
Q ss_pred CcCCcHHHHHHHHHcCCC
Q 017052 325 KPKTDLPSLVNRYLKKEF 342 (378)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~ 342 (378)
.++++++++++.+++|
T Consensus 153 --~~d~~e~l~l~a~~~I 168 (168)
T d1uufa2 153 --IPETQEMLDFCAEHGI 168 (168)
T ss_dssp --HHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHHcCC
Confidence 4578899999887764
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.90 E-value=2.7e-24 Score=177.93 Aligned_cols=146 Identities=21% Similarity=0.225 Sum_probs=118.2
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~ 244 (378)
+|+||||+++++++|||++| +.+++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++++.++++|++++++
T Consensus 1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~ 78 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT 78 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence 68999999999999999998 5689999999999987 9999999999999999 8999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeeec
Q 017052 245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG 322 (378)
Q Consensus 245 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 322 (378)
+. +. ..+.+.+ ++|+|||++|. .+..++++++++ |+++.+|..... ...+++.. +.+++++.|+++.
T Consensus 79 ~~----~~---~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~-G~~v~~G~~~g~-~~~~~~~~~~~k~~~i~g~~~~ 147 (171)
T d1iz0a2 79 YA----EV---PERAKAWGGLDLVLEVRGK--EVEESLGLLAHG-GRLVYIGAAEGE-VAPIPPLRLMRRNLAVLGFWLT 147 (171)
T ss_dssp GG----GH---HHHHHHTTSEEEEEECSCT--THHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHH
T ss_pred hh----hh---hhhhhccccccccccccch--hHHHHHHHHhcC-CcEEEEeCCCCC-CCCccHHHHHHCCcEEEEEeCc
Confidence 75 22 2333445 89999999884 578999999997 999999976542 33333333 3679999998765
Q ss_pred cC
Q 017052 323 GW 324 (378)
Q Consensus 323 ~~ 324 (378)
.+
T Consensus 148 ~~ 149 (171)
T d1iz0a2 148 PL 149 (171)
T ss_dssp HH
T ss_pred Ch
Confidence 54
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.90 E-value=6.8e-24 Score=178.59 Aligned_cols=172 Identities=19% Similarity=0.214 Sum_probs=132.4
Q ss_pred CChhhhhhhchhhhhhHHHHHhhcCCCCCCeEEEE-cc-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHHhCCC
Q 017052 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAKAFGV 239 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~-Ga-g~vG~~aiqla~~~g~~~vi~v~~~~----~~~~~l~~~g~ 239 (378)
+|+++||+++++++|||++|.+..++++|++|||+ |+ |++|++++|+||.+|+ +||++.+++ ++.+.++++|+
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa 79 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA 79 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence 68999999999999999999888999999999997 66 9999999999999999 888876554 34567889999
Q ss_pred cEEeCCCC-CCchHHHHHHHHh---CCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-ccccc
Q 017052 240 TEFLNPND-NNEPVQQVIKRIT---DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGR 314 (378)
Q Consensus 240 ~~vi~~~~-~~~~~~~~i~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~ 314 (378)
++++++++ +...+.+.+++.+ ++++|++||++|+ +.+..++++++++ |+++.+|..... +..++... +++++
T Consensus 80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~l~~k~~ 156 (189)
T d1gu7a2 80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTYGGMSFQ-PVTIPTSLYIFKNF 156 (189)
T ss_dssp SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTT-CEEEECCCCSSC-CEEECHHHHHHSCC
T ss_pred cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCC-cEEEEECCccCC-CccCcHHHHHHCCc
Confidence 99998752 2334555555543 3489999999997 5788999999997 999999976543 33444433 35689
Q ss_pred EEEEeeeccCCc------CCcHHHHHHHHHcCC
Q 017052 315 TLKGSLFGGWKP------KTDLPSLVNRYLKKE 341 (378)
Q Consensus 315 ~i~g~~~~~~~~------~~~~~~~~~~~~~~~ 341 (378)
++.|+++..+.. .+.+.++++++++|+
T Consensus 157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 189 (189)
T d1gu7a2 157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK 189 (189)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence 999987654321 123566777766664
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.88 E-value=7.4e-23 Score=171.79 Aligned_cols=172 Identities=18% Similarity=0.191 Sum_probs=126.5
Q ss_pred CCChhhhhhhchhhhhhHHHHHhhcCCCCC--CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCc
Q 017052 165 IAPLEKICLLSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVT 240 (378)
Q Consensus 165 ~l~~~~aa~~~~~~~ta~~al~~~~~~~~g--~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~ 240 (378)
++|+.+.| ++.++.|||++|.+..++++| ++|||+|+ |++|++++|+||.+|+++|+++++++++.. +.+++|++
T Consensus 1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad 79 (187)
T d1vj1a2 1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD 79 (187)
T ss_dssp CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence 35666654 666899999999999999987 88999987 999999999999999977777776666554 55679999
Q ss_pred EEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC-Ceeecc--------ccccc
Q 017052 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAH--------YGLFL 311 (378)
Q Consensus 241 ~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~--------~~~~~ 311 (378)
+++|++ ++++.+.+++.++.++|+|||++|+ +.+..++++++++ |+++.+|..+.. ...+.+ .....
T Consensus 80 ~vi~~~--~~~~~~~~~~~~~~GvDvv~D~vGg-~~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~ 155 (187)
T d1vj1a2 80 AAVNYK--TGNVAEQLREACPGGVDVYFDNVGG-DISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE 155 (187)
T ss_dssp EEEETT--SSCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred EEeecc--chhHHHHHHHHhccCceEEEecCCc-hhHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence 999998 7789999999887799999999997 6889999999997 999999975431 111111 11124
Q ss_pred cccEEEEeeeccCCc--CCcHHHHHHHHHcCC
Q 017052 312 SGRTLKGSLFGGWKP--KTDLPSLVNRYLKKE 341 (378)
Q Consensus 312 ~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~ 341 (378)
+++++.++.+..+.. .+.++++.+++.+|+
T Consensus 156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk 187 (187)
T d1vj1a2 156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK 187 (187)
T ss_dssp TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence 577888776544322 123555666666654
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.87 E-value=8.3e-22 Score=165.98 Aligned_cols=127 Identities=27% Similarity=0.313 Sum_probs=117.2
Q ss_pred hhhhhhchhhhhhHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC
Q 017052 169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248 (378)
Q Consensus 169 ~~aa~~~~~~~ta~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~ 248 (378)
++.+++...++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++.+++|++.++++|+++++++.
T Consensus 2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~-- 78 (195)
T d1kola2 2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSL-- 78 (195)
T ss_dssp HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTS--
T ss_pred chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCC--
Confidence 57788899999999997 789999999999999999999999999999998999999999999999999999999987
Q ss_pred CchHHHHHHHHhCC-CccEEEeccCC---------------hHHHHHHHHHhccCCccEEEeccCCC
Q 017052 249 NEPVQQVIKRITDG-GADYSFECIGD---------------TGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 249 ~~~~~~~i~~~~~~-~~d~vid~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.++.+.+.+++++ ++|++||++|. ++.++.++++++++ |+++.+|.+..
T Consensus 79 ~~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~ 144 (195)
T d1kola2 79 DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVT 144 (195)
T ss_dssp SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCS
T ss_pred CcCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCC
Confidence 67899999999988 99999999984 36899999999997 99999997654
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=1.1e-21 Score=162.10 Aligned_cols=148 Identities=14% Similarity=0.165 Sum_probs=117.9
Q ss_pred CChhhhhhhchhhhhhHHHHH---hhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 166 APLEKICLLSCGLSAGLGAAW---NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~---~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
+|+.+||.++++..|||++++ +....+++++|||+|+ |++|++++|+||.+|+ +||++++++++.+.++++|+++
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~ 79 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR 79 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence 578999999999999998763 3333455679999987 9999999999999999 8999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEee
Q 017052 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL 320 (378)
Q Consensus 242 vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 320 (378)
++++++ .++. +.+....+|.++|++|+ ..+...+++++++ |+++.+|..... ..+++... +.+++++.|+.
T Consensus 80 vi~~~~--~~~~---~~l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~-Griv~~G~~~~~-~~~~~~~~~~~k~~~i~G~~ 151 (177)
T d1o89a2 80 VLPRDE--FAES---RPLEKQVWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGGF-TLPTTVMPFILRNVRLQGVD 151 (177)
T ss_dssp EEEGGG--SSSC---CSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTCS-CCCCCSHHHHHHCCEEEECC
T ss_pred cccccc--HHHH---HHHHhhcCCeeEEEcch-HHHHHHHHHhccc-cceEeecccCCc-cccccHHHHHHCCCeEEEEe
Confidence 999863 2222 22233367999999998 6889999999997 999999987652 33333333 35689999975
Q ss_pred ec
Q 017052 321 FG 322 (378)
Q Consensus 321 ~~ 322 (378)
..
T Consensus 152 ~~ 153 (177)
T d1o89a2 152 SV 153 (177)
T ss_dssp SS
T ss_pred cc
Confidence 43
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.82 E-value=4.4e-21 Score=156.96 Aligned_cols=137 Identities=19% Similarity=0.155 Sum_probs=108.0
Q ss_pred hhhhhHH---HHHhhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchH
Q 017052 177 GLSAGLG---AAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252 (378)
Q Consensus 177 ~~~ta~~---al~~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~ 252 (378)
+..|||. +|.+....+++++|||+|+ |++|++++|+||.+|+ +||+++++++|.+.++++|+++++++++ +
T Consensus 4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~----~ 78 (167)
T d1tt7a2 4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED----V 78 (167)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH----H
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc----h
Confidence 4556664 4555566778889999987 9999999999999999 8999999999999999999999987641 1
Q ss_pred HHHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-cccccEEEEeee
Q 017052 253 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLF 321 (378)
Q Consensus 253 ~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 321 (378)
.......+.+ ++|+|||++|+ +.+..++++++++ |+++.+|..... ..+++... ++++++++|...
T Consensus 79 ~~~~~~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~-G~iv~~G~~~g~-~~~~~~~~l~~k~~~i~G~~~ 146 (167)
T d1tt7a2 79 YDGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGGG-EVPATVYPFILRGVSLLGIDS 146 (167)
T ss_dssp CSSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSCS-CEEECSHHHHTSCCEEEECCS
T ss_pred hchhhhcccCCCceEEEecCcH-HHHHHHHHHhccC-ceEEEeeccCCC-cccCCHHHHHHCCcEEEEEec
Confidence 1122223334 89999999998 6889999999997 999999988763 34444333 467999998754
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.65 E-value=1.4e-15 Score=120.63 Aligned_cols=133 Identities=15% Similarity=0.093 Sum_probs=100.1
Q ss_pred cceeeEEeecC--CCC----eEEEEeecCCCCCCcEEEEEeEEecCcccccccccCCCCCcccccceeEEEEEeCCCCCc
Q 017052 11 ITCKAAVAWGA--GQP----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTE 84 (378)
Q Consensus 11 ~~~~a~~~~~~--~~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (378)
.+.|+|++.+. |.| |++++.++|+|++||||||++|.++++......... ...-++..+.+|+|++ ++.++
T Consensus 2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~~-~~g~~~~g~~vg~Vv~--S~~~~ 78 (147)
T d1v3va1 2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRL-KEGAVMMGQQVARVVE--SKNSA 78 (147)
T ss_dssp CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGGS-CTTSBCCCCEEEEEEE--ESCTT
T ss_pred cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccccc-ccCCccccceEEEEEE--eCCCc
Confidence 35688888887 434 899999999999999999999999987543322221 3334566789999998 56788
Q ss_pred CCCCCEEEeecccCCCCCcccccCCCCCcccccccccccccCCCcccccccCCcccccccccceeeEEEEeCCceeeCCC
Q 017052 85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 164 (378)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 164 (378)
|++||+|++. ++|+||.+++.+.+.++|+
T Consensus 79 f~~GD~V~g~---------------------------------------------------~gw~ey~v~~~~~l~kv~~ 107 (147)
T d1v3va1 79 FPAGSIVLAQ---------------------------------------------------SGWTTHFISDGKGLEKLLT 107 (147)
T ss_dssp SCTTCEEEEC---------------------------------------------------CCSBSEEEECSSSCEECCT
T ss_pred ccCCCEEEEc---------------------------------------------------cCCEeEEEeccceeeEccc
Confidence 9999999865 4899999999999999987
Q ss_pred CCCh-----hhhhhhchhhhhh-HHHHHhhcCCCCCCeEEE
Q 017052 165 IAPL-----EKICLLSCGLSAG-LGAAWNVADISKGSTVVI 199 (378)
Q Consensus 165 ~l~~-----~~aa~~~~~~~ta-~~al~~~~~~~~g~~VLI 199 (378)
.++. ...+++....+|| |..|. ...+.|++||+
T Consensus 108 ~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~ 146 (147)
T d1v3va1 108 EWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT 146 (147)
T ss_dssp TCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred cccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence 6443 3445566667775 44553 33567999987
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=5.1e-15 Score=102.82 Aligned_cols=73 Identities=15% Similarity=0.203 Sum_probs=66.2
Q ss_pred CChhhhhhhchhhhhhHHHHH---hhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 166 APLEKICLLSCGLSAGLGAAW---NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 166 l~~~~aa~~~~~~~ta~~al~---~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
+|++||+.+++++.|||.+++ +....+++++|||+|+ |++|.+++|+|+.+|+ +|+++.+++++.++++++|+
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA 77 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA 77 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence 588999999999999998764 4455789999999987 9999999999999999 89999999999999999985
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.00 E-value=5.5e-06 Score=65.05 Aligned_cols=99 Identities=22% Similarity=0.209 Sum_probs=73.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-EeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+..+|+|+|+|..|+.+++.|+.+|+ .|.+++.+.++++.++...... ...+. +...+.+.+. ..|+||-++
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~-~~~~l~~~~~-----~aDivI~aa 103 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYS-NSAEIETAVA-----EADLLIGAV 103 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEEC-CHHHHHHHHH-----TCSEEEECC
T ss_pred CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehh-hhhhHHHhhc-----cCcEEEEee
Confidence 35689999999999999999999999 9999999999999998854332 11111 1334444444 579999876
Q ss_pred CCh------HHHHHHHHHhccCCccEEEeccCCC
Q 017052 272 GDT------GMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 272 g~~------~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
=-+ -.-++.++.|+++ +.+|++....+
T Consensus 104 lipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqG 136 (168)
T d1pjca1 104 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQG 136 (168)
T ss_dssp CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTC
T ss_pred ecCCcccCeeecHHHHhhcCCC-cEEEEeecCCC
Confidence 422 1246788999997 99999976554
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.86 E-value=0.00016 Score=56.76 Aligned_cols=79 Identities=18% Similarity=0.240 Sum_probs=61.1
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhCCCcEEeCCCCCCchHHHHHHHHhCCCc
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~ 264 (378)
.+..+--.+++|||+|+|.+|..+++.+...|++.++++.++.++.+ +++++|. ..+.++ ++.+.+. .+
T Consensus 16 ~~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-~~~~~~----~~~~~l~-----~~ 85 (159)
T d1gpja2 16 ERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-EAVRFD----ELVDHLA-----RS 85 (159)
T ss_dssp HHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-EECCGG----GHHHHHH-----TC
T ss_pred HHHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-ccccch----hHHHHhc-----cC
Confidence 35555568899999999999999999999999978999999987765 6667775 344443 4555444 58
Q ss_pred cEEEeccCCh
Q 017052 265 DYSFECIGDT 274 (378)
Q Consensus 265 d~vid~~g~~ 274 (378)
|+||.|++++
T Consensus 86 Divi~atss~ 95 (159)
T d1gpja2 86 DVVVSATAAP 95 (159)
T ss_dssp SEEEECCSSS
T ss_pred CEEEEecCCC
Confidence 9999999874
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.84 E-value=6.6e-05 Score=63.71 Aligned_cols=105 Identities=22% Similarity=0.245 Sum_probs=74.5
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhC--CCccEE
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITD--GGADYS 267 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v 267 (378)
-+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+++.+...+ .|..+ ..+..+.+.+... +++|++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~iDiL 80 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLED-ERERVRFVEEAAYALGRVDVL 80 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhcCCCCeE
Confidence 47899999988 9999999999999999 89999999999998888877553 34431 2333333433322 479999
Q ss_pred EeccCCh-------------------------HHHHHHHHHhcc-CCccEEEeccCC
Q 017052 268 FECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGVPK 298 (378)
Q Consensus 268 id~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~ 298 (378)
+++.|.. ...+.++..|.+ ++|++|.++...
T Consensus 81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~ 137 (248)
T d2d1ya1 81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ 137 (248)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence 9988742 123344556643 348999887544
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.81 E-value=4.7e-05 Score=64.74 Aligned_cols=102 Identities=17% Similarity=0.271 Sum_probs=70.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEe--CCCCCCchHHHHHHHHhC--CCccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFL--NPNDNNEPVQQVIKRITD--GGADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi--~~~~~~~~~~~~i~~~~~--~~~d~ 266 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ ++....+ |..+ ..+..+.+.+... +++|+
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899999988 9999999999999999 89999999998877765 4432322 4331 2333333333322 47999
Q ss_pred EEeccCCh--------------------------HHHHHHHHHhccCCccEEEecc
Q 017052 267 SFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 267 vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
++++.|.. ...+.++..|.+++|+++.++.
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS 138 (250)
T d1ydea1 83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS 138 (250)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccc
Confidence 99988731 1234455566555589998874
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=97.81 E-value=4e-05 Score=60.87 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=73.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCC------------------CchHHH
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN------------------NEPVQQ 254 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~------------------~~~~~~ 254 (378)
+..+|+|+|+|.+|+.+++.|+.+|+ .|.+++.+.++++.+++++...+...... .....+
T Consensus 28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 34689999999999999999999999 99999999999999999987554211000 001122
Q ss_pred HHHHHhCCCccEEEeccCCh------HHHHHHHHHhccCCccEEEeccCCC
Q 017052 255 VIKRITDGGADYSFECIGDT------GMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 255 ~i~~~~~~~~d~vid~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
.+.+... ..|+||-++=-+ -.-++.++.|+++ +.+|++....+
T Consensus 107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqG 155 (183)
T d1l7da1 107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAG 155 (183)
T ss_dssp HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGT
T ss_pred HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCC
Confidence 2332222 589999766321 1346788999997 99999876543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.80 E-value=6.5e-05 Score=63.94 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=72.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEEe---CCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFL---NPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~vi---~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...+. |.. +..+..+.+.... .+++|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~~~g~iD 82 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVS-SEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTT-CHHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecC-CHHHHHHHHHHHHHHhCCCC
Confidence 6899999988 9999999999999999 899999998887654 456654432 322 1233333333332 24789
Q ss_pred EEEeccCCh-------------------------HHHHHHHHHhccCCccEEEeccCC
Q 017052 266 YSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 266 ~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
+++++.|.. ...+.++..|...+|++|.++...
T Consensus 83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~ 140 (253)
T d1hxha_ 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS 140 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence 999998842 123455667765559999987543
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.75 E-value=7.7e-05 Score=59.17 Aligned_cols=74 Identities=16% Similarity=0.193 Sum_probs=57.8
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCC
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGG 263 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~ 263 (378)
+++...+.++++|||+|+|+.+.+++..++..|++++..+.|+.++.+.+.+ ++...+.... ...
T Consensus 8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~--------------~~~ 73 (167)
T d1npya1 8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--------------NQQ 73 (167)
T ss_dssp HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--------------TCC
T ss_pred HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc--------------ccc
Confidence 3467777789999999999999999999999998889999999998877754 4543322111 126
Q ss_pred ccEEEeccC
Q 017052 264 ADYSFECIG 272 (378)
Q Consensus 264 ~d~vid~~g 272 (378)
+|+|++|+.
T Consensus 74 ~DliINaTp 82 (167)
T d1npya1 74 ADILVNVTS 82 (167)
T ss_dssp CSEEEECSS
T ss_pred hhhheeccc
Confidence 899999975
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.62 E-value=0.00026 Score=59.72 Aligned_cols=105 Identities=18% Similarity=0.196 Sum_probs=70.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcE---EeCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~---vi~~~~~~~~~~~~i~~~~--~~ 262 (378)
.|+++||+|+ +++|..++..+...|+ +|+.+++++++.+.+ ++.|... ..|.++ ..+..+.++... .+
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~g 83 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIG 83 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcC
Confidence 6899999998 8999999999999999 899999999887644 3455443 224432 233344444332 34
Q ss_pred CccEEEeccCCh-------------------------HHHHHHHHHhcc-CCccEEEeccCCC
Q 017052 263 GADYSFECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGVPKL 299 (378)
Q Consensus 263 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~~ 299 (378)
.+|+++++.|.. ...+.++..|.+ ++|+++.++....
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~ 146 (244)
T d1yb1a_ 84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG 146 (244)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence 799999998853 122334555533 3488998877654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=0.00013 Score=61.68 Aligned_cols=102 Identities=24% Similarity=0.418 Sum_probs=69.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcE---EeCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~---vi~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++... ..|..+ ..+..+.+.+.. .+++|
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 80 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD-PASIESVLEKIRAEFGEVD 80 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHTCSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC-HHHhhhhhhhhhcccCCcc
Confidence 5899999988 9999999999999999 8999999998876554 455432 234432 333444444432 24799
Q ss_pred EEEeccCCh-------------------------HHHHHHHHHhc-cCCccEEEecc
Q 017052 266 YSFECIGDT-------------------------GMITTALQSCC-DGWGLAVTLGV 296 (378)
Q Consensus 266 ~vid~~g~~-------------------------~~~~~~~~~l~-~~~G~~v~~g~ 296 (378)
+++++.|.. ...+.+++.|. .++|+++.++.
T Consensus 81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS 137 (243)
T d1q7ba_ 81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS 137 (243)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence 999988742 12334555552 23499999975
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.50 E-value=0.00046 Score=55.77 Aligned_cols=76 Identities=21% Similarity=0.288 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCC-cEEeCCCCCCchHHHHHHHHhCCC
Q 017052 191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGV-TEFLNPNDNNEPVQQVIKRITDGG 263 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~-~~vi~~~~~~~~~~~~i~~~~~~~ 263 (378)
--+|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ ... ....+.. +. +.+.+.. ++
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~--~~---~~~~~~~-~~ 92 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA--DD---ASRAEAV-KG 92 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC--SH---HHHHHHT-TT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhcc--cH---HHHHHHh-cC
Confidence 458999999998 9999999999999999 89999999988765543 221 1223333 21 2233332 37
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|++|++.|.
T Consensus 93 iDilin~Ag~ 102 (191)
T d1luaa1 93 AHFVFTAGAI 102 (191)
T ss_dssp CSEEEECCCT
T ss_pred cCeeeecCcc
Confidence 8999999874
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.49 E-value=0.0004 Score=58.76 Aligned_cols=102 Identities=19% Similarity=0.349 Sum_probs=68.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-----HhCCCcEE---eCCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-----KAFGVTEF---LNPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-----~~~g~~~v---i~~~~~~~~~~~~i~~~~~-- 261 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.++++.++.+.+ ++.|.... .|..+ ..+..+.+.+...
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF 81 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5899999988 9999999999999999 899999998775432 34565432 24431 2333333333322
Q ss_pred CCccEEEeccCCh-------------------------HHHHHHHHHhcc-CCccEEEecc
Q 017052 262 GGADYSFECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGV 296 (378)
Q Consensus 262 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~ 296 (378)
+++|+++++.|.. ...+.++..|.+ ++|+++.++.
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S 142 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 142 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence 4799999998742 123445666643 3489998865
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.48 E-value=0.00022 Score=60.04 Aligned_cols=79 Identities=22% Similarity=0.275 Sum_probs=57.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEE-eCCCCCCchHHHHHHHHhC--CCccEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF-LNPNDNNEPVQQVIKRITD--GGADYS 267 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~v-i~~~~~~~~~~~~i~~~~~--~~~d~v 267 (378)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++...+ .|..+ ..+..+.+.+... +++|++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iDil 81 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHhcCCceEE
Confidence 5899999988 9999999999999999 8999999998876654 4665443 34432 2333333333322 479999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
+++.|.
T Consensus 82 VnnAG~ 87 (242)
T d1ulsa_ 82 VHYAGI 87 (242)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 998874
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.43 E-value=0.00036 Score=58.82 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=55.8
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEE--eCCCCCCchHHHHHHHHhCCCccEE
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF--LNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~v--i~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +++.... .|.. +.+..+.+.+. -+++|++
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~--d~~~v~~~~~~-~g~iDil 80 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLG--DWEATERALGS-VGPVDLL 80 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--CHHHHHHHHTT-CCCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCC--CHHHHHHHHHH-hCCceEE
Confidence 37899999988 9999999999999999 8999999998876554 4543332 3443 33322222221 2489999
Q ss_pred EeccCC
Q 017052 268 FECIGD 273 (378)
Q Consensus 268 id~~g~ 273 (378)
+++.|.
T Consensus 81 VnnAg~ 86 (244)
T d1pr9a_ 81 VNNAAV 86 (244)
T ss_dssp EECCCC
T ss_pred Eecccc
Confidence 998875
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.39 E-value=0.00036 Score=59.36 Aligned_cols=79 Identities=18% Similarity=0.251 Sum_probs=56.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhCCCcE-E--eCCCCCCchH---HHHHHHHhC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE-F--LNPNDNNEPV---QQVIKRITD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~----l~~~g~~~-v--i~~~~~~~~~---~~~i~~~~~ 261 (378)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+. +++.+... . .|..+ ..+. .+.+.+..+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD 82 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence 7899999987 9999999999999999 89999999877554 34455544 2 24432 2222 233334444
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+..|+++++.|.
T Consensus 83 g~idilinnag~ 94 (258)
T d1ae1a_ 83 GKLNILVNNAGV 94 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCcEEEeccccc
Confidence 578999998875
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00084 Score=56.90 Aligned_cols=80 Identities=19% Similarity=0.356 Sum_probs=56.1
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCc-EE----eCCCCCCchHHHHHHHHhC
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-EF----LNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~-~v----i~~~~~~~~~~~~i~~~~~ 261 (378)
-+|+++||+|+ +++|.+++..+...|+ +|+.+++++++.+.+ ++.+.. .+ .|..+ +++..+.+.....
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~v~~~~~ 85 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRS 85 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC-HHHHHHHHHHHHH
Confidence 36899999988 9999999999999999 899999999886654 333322 22 24442 3344444443322
Q ss_pred --CCccEEEeccCC
Q 017052 262 --GGADYSFECIGD 273 (378)
Q Consensus 262 --~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 86 ~~g~iD~lVnnAg~ 99 (257)
T d1xg5a_ 86 QHSGVDICINNAGL 99 (257)
T ss_dssp HHCCCSEEEECCCC
T ss_pred hcCCCCEEEecccc
Confidence 479999999875
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.35 E-value=0.00093 Score=56.05 Aligned_cols=105 Identities=18% Similarity=0.203 Sum_probs=71.6
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE---eCCCCCCchHHHHHHHHhC--CCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v---i~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
-.|+++||+|+ +++|.+.++-+...|+ +|+.+.++.++.+.+ ++++.... .|.+ +.++..+.+.+... +++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls-~~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVS-DPKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTT-SHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCC-CHHHHHHHHHHHHHHhCCc
Confidence 36899999988 8999999999999999 999999999876544 55776542 2443 23344444444433 479
Q ss_pred cEEEeccCCh-------------------------HHHHHHHHHhccCCccEEEeccCCC
Q 017052 265 DYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 265 d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
|+++++.|.. ...+..+..+.+. +.++.++....
T Consensus 81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~a~ 139 (241)
T d2a4ka1 81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSVAG 139 (241)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCCTT
T ss_pred cEeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeecccccc
Confidence 9999987742 1233445567765 77776665443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.34 E-value=0.00026 Score=59.67 Aligned_cols=80 Identities=16% Similarity=0.179 Sum_probs=57.3
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hCCCcEE---eCCCCCCchHHHHHHHHhC--CCc
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF---LNPNDNNEPVQQVIKRITD--GGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~g~~~v---i~~~~~~~~~~~~i~~~~~--~~~ 264 (378)
-+|+++||+|+ +++|+++++.+...|+ +|+.+++++++.+.+. +++.... .|..+ ..+..+.+.+... +++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 81 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGL 81 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC-HHHHHHHHHHHHHHhCCC
Confidence 46899999988 9999999999999999 8999999998876554 4543332 24431 2333444444322 479
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++++.|.
T Consensus 82 dilinnAG~ 90 (244)
T d1nffa_ 82 HVLVNNAGI 90 (244)
T ss_dssp CEEEECCCC
T ss_pred eEEEECCcc
Confidence 999999885
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.34 E-value=0.00034 Score=59.84 Aligned_cols=107 Identities=15% Similarity=0.126 Sum_probs=67.2
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----CCCcEE-eCCCCCCchHHHH-HHHH--hC
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTEF-LNPNDNNEPVQQV-IKRI--TD 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-----~g~~~v-i~~~~~~~~~~~~-i~~~--~~ 261 (378)
-+|+++||+|+ +++|++++..+...|+ +|+.++++.++++.+.+ .+.... +..+..+....+. .... ..
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 47899999998 9999999999999999 99999999988766532 333332 2111112222222 2222 22
Q ss_pred CCccEEEeccCCh-------------------------HHHHHHHHHhccCCccEEEeccCCC
Q 017052 262 GGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 262 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+..|+++.+.|.. ......+..|..++|+++.++....
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~ 153 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG 153 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchh
Confidence 3678888776642 1223344455544489888875443
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.33 E-value=0.00056 Score=57.47 Aligned_cols=77 Identities=14% Similarity=0.115 Sum_probs=54.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE--eCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v--i~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++++.... .|.. +.+..+.+.+. -+++|+++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~-~g~iDilV 79 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLG--DWDATEKALGG-IGPVDLLV 79 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTT--CHHHHHHHHTT-CCCCSEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCC--CHHHHHHHHHH-cCCCeEEE
Confidence 6899999988 9999999999999999 899999998877655 34543332 3443 33322222221 24899999
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
++.|.
T Consensus 80 nnAg~ 84 (242)
T d1cyda_ 80 NNAAL 84 (242)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 98874
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.31 E-value=0.00063 Score=57.50 Aligned_cols=79 Identities=18% Similarity=0.325 Sum_probs=55.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 262 (378)
.++.+||+|+ +++|+++++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .+
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK 86 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5788999988 9999999999989999 899999998876544 44554432 24431 233333444332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 87 ~iDilvnnag~ 97 (251)
T d2c07a1 87 NVDILVNNAGI 97 (251)
T ss_dssp CCCEEEECCCC
T ss_pred Cceeeeecccc
Confidence 89999998874
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.28 E-value=0.0004 Score=59.11 Aligned_cols=79 Identities=28% Similarity=0.406 Sum_probs=56.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~ 262 (378)
+|+++||+|+ +++|++++..+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.... .+
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 6899999988 9999999999999999 899999998877644 33554432 24431 333344443332 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 82 ~iDilVnnaG~ 92 (260)
T d1zema1 82 KIDFLFNNAGY 92 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCeehhhhcc
Confidence 79999998773
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.28 E-value=0.00012 Score=60.39 Aligned_cols=101 Identities=17% Similarity=0.196 Sum_probs=69.9
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEEeCCCCCCchHHHHHHHH-
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRI- 259 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~vi~~~~~~~~~~~~i~~~- 259 (378)
+.+..++++|++||.+|+|. |..++.+|+..|. +|++++.+++-.+.+ +++|.+.+..... +. ....
T Consensus 70 ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g-d~-----~~g~~ 141 (215)
T d1jg1a_ 70 MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG-DG-----SKGFP 141 (215)
T ss_dssp HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-CG-----GGCCG
T ss_pred HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-cc-----ccCCc
Confidence 34778999999999999863 7777788888786 899999998755444 4577766442221 10 0111
Q ss_pred hCCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 260 TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..++||.|+-+.+-...-...++.|+++ |+++..
T Consensus 142 ~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p 175 (215)
T d1jg1a_ 142 PKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP 175 (215)
T ss_dssp GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred ccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence 1237999987666545556788899997 998864
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.27 E-value=0.00069 Score=57.99 Aligned_cols=103 Identities=20% Similarity=0.221 Sum_probs=68.6
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHH----HHHhCCCcEEe---CCCCCCchHHHHHHHHhC-
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCE----KAKAFGVTEFL---NPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~-~~~~~----~l~~~g~~~vi---~~~~~~~~~~~~i~~~~~- 261 (378)
-+|+++||+|+ +++|.++++.+...|+ +|+.++++ ++..+ .+++.+.+... |.. +..++.+.+.+...
T Consensus 16 L~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-~~~~v~~~~~~~~~~ 93 (272)
T d1g0oa_ 16 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG-VVEDIVRMFEEAVKI 93 (272)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCC-CHHHHHHHHHHHHHH
Confidence 35899999998 9999999999999999 78887665 44333 34456655532 333 23344444444332
Q ss_pred -CCccEEEeccCCh-------------------------HHHHHHHHHhccCCccEEEeccC
Q 017052 262 -GGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 262 -~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+++|+++.+.|.. ...+..+..|.++ |+++.++..
T Consensus 94 ~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~ 154 (272)
T d1g0oa_ 94 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI 154 (272)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred hCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence 4789999988752 1244566778876 888877643
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.27 E-value=0.00035 Score=59.28 Aligned_cols=79 Identities=28% Similarity=0.320 Sum_probs=56.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE---eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v---i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ ++++.... .|..+ ..+..+.+.+... +++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 81 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC-HHHHHHHHHHHHHHcCCcc
Confidence 6899999988 8999999999999999 899999998876654 45654432 23331 3333333433322 4799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 82 ilVnnAg~ 89 (254)
T d1hdca_ 82 GLVNNAGI 89 (254)
T ss_dssp EEEECCCC
T ss_pred EEEecCcc
Confidence 99998874
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.00037 Score=58.73 Aligned_cols=80 Identities=15% Similarity=0.171 Sum_probs=57.4
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.........+-...+..+...+. .+++|+++++
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~id~lVn~ 81 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANE-VERLDVLFNV 81 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHH-CSCCSEEEEC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccc-cccceeEEec
Confidence 36899999988 9999999999999999 9999999998887766643333222221234444444332 2478999998
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
.|.
T Consensus 82 ag~ 84 (245)
T d2ag5a1 82 AGF 84 (245)
T ss_dssp CCC
T ss_pred ccc
Confidence 875
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.26 E-value=0.00049 Score=58.82 Aligned_cols=79 Identities=23% Similarity=0.380 Sum_probs=55.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CC---CcEEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG---VTEFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g---~~~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+|+++||+|+ +++|+++++.+...|+ +|+.+++++++.+.+.+ ++ ....+ |..+ ..+..+.+.+.. .++
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 6899999988 9999999999999999 89999999988765533 33 22222 4431 334444444332 248
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++++.|.
T Consensus 83 iD~lVnnAG~ 92 (268)
T d2bgka1 83 LDIMFGNVGV 92 (268)
T ss_dssp CCEEEECCCC
T ss_pred cceecccccc
Confidence 9999998873
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.24 E-value=0.0021 Score=46.87 Aligned_cols=94 Identities=12% Similarity=-0.027 Sum_probs=65.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~--~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.|++|||+|+|.+|..-++.+...|+ .|++++... +-..++++-+....- .++ ..++ .++++|+-
T Consensus 11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~--~~dl---------~~~~lv~~ 78 (113)
T d1pjqa1 11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGMLTLVEGPFD--ETLL---------DSCWLAIA 78 (113)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSCEEEESSCC--GGGG---------TTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCceeeccCCC--HHHh---------CCCcEEee
Confidence 58899999999999999999999999 777775433 333444333333332 122 2221 26899999
Q ss_pred ccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 270 CIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 270 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+++....-......+++. |.+|.+.+.+.
T Consensus 79 at~d~~~n~~i~~~a~~~-~ilVNv~D~p~ 107 (113)
T d1pjqa1 79 ATDDDTVNQRVSDAAESR-RIFCNVVDAPK 107 (113)
T ss_dssp CCSCHHHHHHHHHHHHHT-TCEEEETTCTT
T ss_pred cCCCHHHHHHHHHHHHHc-CCEEEeCCChh
Confidence 988866666777777776 99998866543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.23 E-value=0.00029 Score=59.82 Aligned_cols=79 Identities=24% Similarity=0.347 Sum_probs=57.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhCCCcEE---eCCCCCCchHHHHHHHHhC--CCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEF---LNPNDNNEPVQQVIKRITD--GGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~-l~~~g~~~v---i~~~~~~~~~~~~i~~~~~--~~~d 265 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.++++.++.+. ++++|.... .|..+ ..+..+.+.+... +++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g~iD 81 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD-QASIDRCVAELLDRWGSID 81 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence 5899999988 9999999999999999 89999999887654 455765542 24432 3333433443322 4899
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 82 ilVnnAg~ 89 (256)
T d1k2wa_ 82 ILVNNAAL 89 (256)
T ss_dssp EEEECCCC
T ss_pred EEEeeccc
Confidence 99998884
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.22 E-value=0.00058 Score=58.05 Aligned_cols=79 Identities=14% Similarity=0.240 Sum_probs=55.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHH---hC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRI---TD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~---~~ 261 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++.+.... .|..+ ..+..+.+.+. .+
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH 84 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC-HHHHHHHHHHHHHHhC
Confidence 6899999988 9999999999999999 899999998876544 33454332 24431 23333333332 23
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 85 ~~idilvnnAG~ 96 (259)
T d2ae2a_ 85 GKLNILVNNAGI 96 (259)
T ss_dssp TCCCEEEECCCC
T ss_pred CCceEEEECCce
Confidence 369999999884
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=97.22 E-value=0.00033 Score=60.25 Aligned_cols=78 Identities=23% Similarity=0.267 Sum_probs=55.6
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEE---eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
+|+++||+|+ +++|+++++.+...|+ +|+.+++++++.+.+ ++++.... .|..+ ..+..+.+.+.. .+++|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 81 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS-LEDQKQAASRCVARFGKID 81 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc-HHHHHHHHHHHHHHhCCcc
Confidence 6899999988 9999999999999999 899999999887554 44554332 24331 233333333322 24799
Q ss_pred EEEeccC
Q 017052 266 YSFECIG 272 (378)
Q Consensus 266 ~vid~~g 272 (378)
+++++.|
T Consensus 82 ilvnnAG 88 (276)
T d1bdba_ 82 TLIPNAG 88 (276)
T ss_dssp EEECCCC
T ss_pred ccccccc
Confidence 9999887
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.22 E-value=0.0012 Score=52.00 Aligned_cols=71 Identities=13% Similarity=0.184 Sum_probs=52.3
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CC---CcEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG---VTEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g---~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
..+|++|||+|+|+.+++++..+..+|+ +++.+.|+.++.+.+.+ +. ....+..+ + .....+|+
T Consensus 15 ~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~----~-------~~~~~~dl 82 (170)
T d1nyta1 15 IRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMD----E-------LEGHEFDL 82 (170)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSG----G-------GTTCCCSE
T ss_pred CCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccccc----c-------ccccccce
Confidence 4679999999999999999999999999 79999999998776654 32 22222221 1 11227899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
|++|+..
T Consensus 83 iIN~Tp~ 89 (170)
T d1nyta1 83 IINATSS 89 (170)
T ss_dssp EEECCSC
T ss_pred eeccccc
Confidence 9999864
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.21 E-value=0.00037 Score=57.43 Aligned_cols=102 Identities=21% Similarity=0.249 Sum_probs=70.0
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
+.+..++++|++||-+|+|. |..++.+|+..|. .+|++++.+++..+.+++ .+...+.....+... . ..
T Consensus 67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~---~--~~ 140 (213)
T d1dl5a1 67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY---G--VP 140 (213)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---C--CG
T ss_pred HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHH---c--cc
Confidence 34778999999999999865 8888889988763 279999999988777655 444433211100000 0 01
Q ss_pred hCCCccEEEeccCChHHHHHHHHHhccCCccEEE
Q 017052 260 TDGGADYSFECIGDTGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~ 293 (378)
..+.||+|+...+-.......++.|+++ |+++.
T Consensus 141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~ 173 (213)
T d1dl5a1 141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV 173 (213)
T ss_dssp GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEE
T ss_pred cccchhhhhhhccHHHhHHHHHHhcCCC-cEEEE
Confidence 1237999997766544556788999997 99877
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.17 E-value=0.00054 Score=57.32 Aligned_cols=99 Identities=17% Similarity=0.226 Sum_probs=63.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc----hHHHHHHHHhCC-CccE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE----PVQQVIKRITDG-GADY 266 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~----~~~~~i~~~~~~-~~d~ 266 (378)
+|++|||+|+ +++|.++++.+...|+ +|+.+++++++.. .....+....... .+...+.+.... ++|+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~ 74 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 74 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence 5899999998 9999999999999999 8988877654321 1111222221111 222233333333 7899
Q ss_pred EEeccCCh--------------------------HHHHHHHHHhccCCccEEEeccCC
Q 017052 267 SFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 267 vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
++++.|.. .....+++.+.++ |+++.++...
T Consensus 75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~ 131 (236)
T d1dhra_ 75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKA 131 (236)
T ss_dssp EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHH
Confidence 99988731 1223345577876 9999987543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.16 E-value=0.0004 Score=58.91 Aligned_cols=79 Identities=18% Similarity=0.314 Sum_probs=55.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHhC--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRITD--G 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~~--~ 262 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+..... +
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~-~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 6899999988 9999999999999999 899999998876543 44565442 23331 2333333333222 4
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 88 ~iDilvnnAG~ 98 (255)
T d1fmca_ 88 KVDILVNNAGG 98 (255)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEeeeCCcC
Confidence 79999998875
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.16 E-value=0.0017 Score=51.32 Aligned_cols=97 Identities=15% Similarity=0.033 Sum_probs=62.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCC-CCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN-DNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~-~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.+++|||+|+|.+|..+++.+...|. .|++++++.++.+.+.+-.....+... .......... + ...|.++.+.
T Consensus 1 ~~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~--i--~~~~~~i~~~ 75 (182)
T d1e5qa1 1 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE--V--AKHDLVISLI 75 (182)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHH--H--TTSSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccccchhhhHhh--h--hccceeEeec
Confidence 36899999999999999999999999 899999999999887663332322221 1111111111 1 1567888777
Q ss_pred CChHHHHHHHHHhccCCccEEEec
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
...........+...+ ..++...
T Consensus 76 ~~~~~~~~~~~~~~~~-~~~~~~~ 98 (182)
T d1e5qa1 76 PYTFHATVIKSAIRQK-KHVVTTS 98 (182)
T ss_dssp CGGGHHHHHHHHHHHT-CEEECSS
T ss_pred cchhhhHHHHHHHhhc-cceeecc
Confidence 6644444445555554 5555543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.11 E-value=0.0019 Score=56.02 Aligned_cols=102 Identities=19% Similarity=0.230 Sum_probs=65.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHH----HHHhCCCcEEeCCCCCCchHHHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCE----KAKAFGVTEFLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~---------~~~~----~l~~~g~~~vi~~~~~~~~~~~~i~~ 258 (378)
+|+++||+|+ +++|++.++.+...|+ +|+..+++. +..+ .+...+.....+..+ ..+..+.+..
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~ 83 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT 83 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch-HHHHHHHHHH
Confidence 5899999998 9999999999999999 888876543 2222 223345555555542 2333333443
Q ss_pred Hh--CCCccEEEeccCCh-------------------------HHHHHHHHHhcc-CCccEEEecc
Q 017052 259 IT--DGGADYSFECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGV 296 (378)
Q Consensus 259 ~~--~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~ 296 (378)
.. .|++|+++++.|.. ...+.++..|.+ ++|++|.++.
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS 149 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS 149 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence 22 34899999998842 123344555532 3489999875
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.10 E-value=0.00065 Score=57.69 Aligned_cols=79 Identities=16% Similarity=0.209 Sum_probs=55.2
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcE---EeCCCCCCchHHHHHH---HHhC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE---FLNPNDNNEPVQQVIK---RITD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~---vi~~~~~~~~~~~~i~---~~~~ 261 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+. +.+... ..|.++ ..+..+.+. +..+
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHHHhC
Confidence 6899999988 9999999999999999 8999999988765442 233322 234431 223333333 3334
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+.+|+++++.|.
T Consensus 85 g~idilvnnAG~ 96 (259)
T d1xq1a_ 85 GKLDILINNLGA 96 (259)
T ss_dssp TCCSEEEEECCC
T ss_pred CCcccccccccc
Confidence 579999999885
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.09 E-value=0.00046 Score=58.29 Aligned_cols=79 Identities=19% Similarity=0.239 Sum_probs=54.7
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhCCCcE--Ee--CCCCCCch---HHHHHHHHhCC-C
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTE--FL--NPNDNNEP---VQQVIKRITDG-G 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~~g~~~--vi--~~~~~~~~---~~~~i~~~~~~-~ 263 (378)
.++|||+|+ +++|+++++.+...|+. .|+.+.++.++.+.+++..... ++ |..+ ..+ +.+.+.+..+. +
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~~~~ 81 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC-HHHHHHHHHHHHHHhCCCC
Confidence 478999998 99999999888778863 6888899999988887754322 22 4431 222 33334333333 6
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++++.|.
T Consensus 82 idilinnAG~ 91 (250)
T d1yo6a1 82 LSLLINNAGV 91 (250)
T ss_dssp CCEEEECCCC
T ss_pred eEEEEEcCcc
Confidence 9999999884
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.08 E-value=0.0009 Score=56.78 Aligned_cols=102 Identities=19% Similarity=0.314 Sum_probs=67.0
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHH----HHHhCCCcEE-e--CCCCCCchHHHHHHHHh--
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCE----KAKAFGVTEF-L--NPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~----~l~~~g~~~v-i--~~~~~~~~~~~~i~~~~-- 260 (378)
-.|+++||+|+ +++|.+.++.+...|+ +|+.+ .++++..+ .+++.|...+ + |.. +..+..+.+....
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS-KPSEVVALFDKAVSH 81 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-SHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCC-CHHHHHHHHHHHHHH
Confidence 46899999988 9999999999999999 67664 55555433 4455676543 2 332 1233333343332
Q ss_pred CCCccEEEeccCCh-------------------------HHHHHHHHHhccCCccEEEecc
Q 017052 261 DGGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 261 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+++|+++++.|.. ...+..+..|.++ |+++.+..
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s 141 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS 141 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence 23789999998852 2345566778776 77776653
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.08 E-value=0.00082 Score=57.55 Aligned_cols=101 Identities=19% Similarity=0.269 Sum_probs=63.5
Q ss_pred CCCeE-EEEcc-ChHHHHHHH-HHHHcCCCeEEEEcCChhhHHHH----HhCCCcE-E--eCCCCCCchHHHHHHHHh--
Q 017052 193 KGSTV-VIFGL-GTVGLSVAQ-GAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 193 ~g~~V-LI~Ga-g~vG~~aiq-la~~~g~~~vi~v~~~~~~~~~l----~~~g~~~-v--i~~~~~~~~~~~~i~~~~-- 260 (378)
.|++| ||+|+ +++|+++++ ||+..|+ +|+.++++.++.+.+ ++.+... . .|.++ ..+..+.+.+..
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~-~~sv~~~~~~~~~~ 78 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKE 78 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC-HHHHHHHHHHHHHh
Confidence 47788 67788 999998886 5566688 899999999886543 3334332 2 24432 222222222222
Q ss_pred CCCccEEEeccCCh-------------------------HHHHHHHHHhccCCccEEEecc
Q 017052 261 DGGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 261 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+++|++++..|-. ...+.++..|++. |+++.++.
T Consensus 79 ~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS 138 (275)
T d1wmaa1 79 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS 138 (275)
T ss_dssp HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred cCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence 24799999988841 1233445566775 99998865
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.05 E-value=0.00096 Score=56.19 Aligned_cols=79 Identities=22% Similarity=0.225 Sum_probs=55.4
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCCCcEE---eCCCCCCchHHHHHHHHh--CCCc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.++++++ ..+.++++|.... .|..+ ..+..+.+.+.. .|++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~G~i 81 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC 81 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcCCC
Confidence 5899999988 9999999999999999 8988888653 3445567776542 24431 233333333332 2479
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+++++.|.
T Consensus 82 DilVnnAG~ 90 (247)
T d2ew8a1 82 DILVNNAGI 90 (247)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999885
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.04 E-value=0.00097 Score=56.53 Aligned_cols=78 Identities=27% Similarity=0.312 Sum_probs=54.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----C--CCcE---EeCCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTE---FLNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~--g~~~---vi~~~~~~~~~~~~i~~~~~- 261 (378)
+|+++||+|+ +++|+++++.+...|+ +|+.++++.++.+.+.+ . +... ..|..+ ..+..+.+.+...
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER 80 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC-HHHHHHHHHHHHHH
Confidence 5889999988 9999999999999999 89999999987654422 2 2222 124432 2334333433322
Q ss_pred -CCccEEEeccC
Q 017052 262 -GGADYSFECIG 272 (378)
Q Consensus 262 -~~~d~vid~~g 272 (378)
|++|+++++.|
T Consensus 81 ~G~iDiLVnnAG 92 (258)
T d1iy8a_ 81 FGRIDGFFNNAG 92 (258)
T ss_dssp HSCCSEEEECCC
T ss_pred hCCCCEEEECCc
Confidence 47999999887
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=97.04 E-value=0.00058 Score=58.10 Aligned_cols=79 Identities=22% Similarity=0.213 Sum_probs=53.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh-hH----HHHHhCCCcEE---eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KC----EKAKAFGVTEF---LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~-~~----~~l~~~g~~~v---i~~~~~~~~~~~~i~~~~--~ 261 (378)
+|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +. +.+++.|.... .|..+ ..+..+.+.+.. .
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 6899999988 9999999999999999 8988888754 33 33455665443 24431 233333333332 2
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 84 G~iDiLVnnAG~ 95 (261)
T d1geea_ 84 GKLDVMINNAGL 95 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEeecccee
Confidence 479999998875
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.04 E-value=0.00097 Score=56.06 Aligned_cols=102 Identities=14% Similarity=0.112 Sum_probs=67.5
Q ss_pred HhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CC-CcEEeCCCCCCchHHHHHHHH
Q 017052 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FG-VTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g-~~~vi~~~~~~~~~~~~i~~~ 259 (378)
....++++|++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++ ++ ...+.... .++.+ .+
T Consensus 78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~---~Di~~---~~ 150 (250)
T d1yb2a1 78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR---SDIAD---FI 150 (250)
T ss_dssp ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC---SCTTT---CC
T ss_pred HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE---eeeec---cc
Confidence 4678999999999998864 6777778887653 289999999998887765 22 22221111 11111 01
Q ss_pred hCCCccEEE-eccCChHHHHHHHHHhccCCccEEEec
Q 017052 260 TDGGADYSF-ECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 ~~~~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.||.|+ |.......+..+.+.|+++ |+++.+.
T Consensus 151 ~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~ 186 (250)
T d1yb2a1 151 SDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL 186 (250)
T ss_dssp CSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred ccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence 123789876 5544446789999999997 9998763
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=97.03 E-value=0.00081 Score=56.79 Aligned_cols=79 Identities=20% Similarity=0.310 Sum_probs=55.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCC--c-EEe--CCCCCCchHHHHHHHHh--CCC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV--T-EFL--NPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~--~-~vi--~~~~~~~~~~~~i~~~~--~~~ 263 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+.+ ++. . ..+ |..+ ..+..+.+.+.. .|+
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~ 82 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence 6899999988 9999999999999999 89999999888776543 322 1 222 4331 223333333322 248
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++++.|.
T Consensus 83 iDiLVnnAg~ 92 (251)
T d1zk4a1 83 VSTLVNNAGI 92 (251)
T ss_dssp CCEEEECCCC
T ss_pred ceEEEecccc
Confidence 9999998875
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.02 E-value=0.001 Score=56.35 Aligned_cols=78 Identities=15% Similarity=0.260 Sum_probs=54.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CCC
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGG 263 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~~ 263 (378)
|+.+||+|+ +++|++.+..+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .++
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 677899988 9999999999999999 899999998776543 44565432 24432 333443444332 247
Q ss_pred ccEEEeccCC
Q 017052 264 ADYSFECIGD 273 (378)
Q Consensus 264 ~d~vid~~g~ 273 (378)
+|+++++.|.
T Consensus 80 iDilVnnAG~ 89 (257)
T d2rhca1 80 VDVLVNNAGR 89 (257)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEecccc
Confidence 9999999874
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.00038 Score=56.86 Aligned_cols=96 Identities=13% Similarity=0.127 Sum_probs=61.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.++|+|+|| |.+|..++..+...|. +|+++.+++++.......+...+. |.. + . +.+.+... +.|+||.++
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~gD~~--d--~-~~l~~al~-~~d~vi~~~ 75 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVVGDVL--Q--A-ADVDKTVA-GQDAVIVLL 75 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEESCTT--S--H-HHHHHHHT-TCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccccccccc--c--h-hhHHHHhc-CCCEEEEEe
Confidence 578999998 9999999998888898 999999998886544444444332 332 2 2 22322222 689999998
Q ss_pred CCh----------HHHHHHHHHhccC-CccEEEecc
Q 017052 272 GDT----------GMITTALQSCCDG-WGLAVTLGV 296 (378)
Q Consensus 272 g~~----------~~~~~~~~~l~~~-~G~~v~~g~ 296 (378)
|.. .....+++.++.. -.+++.++.
T Consensus 76 g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 76 GTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp CCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 752 1122344444442 146777654
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.0022 Score=51.13 Aligned_cols=75 Identities=19% Similarity=0.240 Sum_probs=51.3
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hC----CC-cEEeCCCCCCchHHHHHHHHhCC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AF----GV-TEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~----g~-~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
-.+++|||+|+|+.|.+++..+...|++.++.+.+++++.+.+. ++ .. ..+.++.+ ...+.+.+.
T Consensus 16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----- 89 (182)
T d1vi2a1 16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEALA----- 89 (182)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHH-----
T ss_pred cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc-ccchhhhhc-----
Confidence 46899999999999999999999999989999999877655432 22 21 12333331 122322222
Q ss_pred CccEEEeccC
Q 017052 263 GADYSFECIG 272 (378)
Q Consensus 263 ~~d~vid~~g 272 (378)
.+|+||+|+.
T Consensus 90 ~~diiIN~Tp 99 (182)
T d1vi2a1 90 SADILTNGTK 99 (182)
T ss_dssp TCSEEEECSS
T ss_pred ccceeccccC
Confidence 6899999976
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.00078 Score=57.02 Aligned_cols=79 Identities=22% Similarity=0.326 Sum_probs=55.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-C----CC-cE---EeCCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GV-TE---FLNPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~----g~-~~---vi~~~~~~~~~~~~i~~~~~- 261 (378)
.|+++||+|+ +++|+++++.+...|+ +|+.++++.++.+.+.+ + +. .. ..|..+ ..++.+.+.+...
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC-HHHHHHHHHHHHHH
Confidence 5899999988 9999999999999999 89999999887655432 2 21 22 224432 3334444443322
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
|++|+++++.|.
T Consensus 80 ~G~iDilVnnAg~ 92 (254)
T d2gdza1 80 FGRLDILVNNAGV 92 (254)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCcCeecccccc
Confidence 479999999885
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.98 E-value=0.00097 Score=57.01 Aligned_cols=79 Identities=22% Similarity=0.298 Sum_probs=55.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCc--E----EeCCCCCCchHHHHHHHHhC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT--E----FLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~--~----vi~~~~~~~~~~~~i~~~~~ 261 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +.+.. . ..|..+ ..+..+.+.+...
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK 81 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC-HHHHHHHHHHHHH
Confidence 5899999988 9999999999999999 8999999998866543 33321 1 224431 2333333433322
Q ss_pred --CCccEEEeccCC
Q 017052 262 --GGADYSFECIGD 273 (378)
Q Consensus 262 --~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 82 ~~g~iDilvnnAG~ 95 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGA 95 (272)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCceEEEeCCcc
Confidence 479999998774
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.97 E-value=0.00051 Score=58.20 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--e--CCCCCCchHHHHHHHHhC--
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--L--NPNDNNEPVQQVIKRITD-- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i--~~~~~~~~~~~~i~~~~~-- 261 (378)
+|++|||+|+ +++|.+++..+...|+ +|+.+.+++++.+.+++ .+...+ + +...+..++.+.+.....
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 5899999988 8999999999999999 77777666555444432 222222 2 322112234444444332
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 83 g~iDilvnnAG~ 94 (254)
T d1sbya1 83 KTVDILINGAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEeCCCC
Confidence 479999999985
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.94 E-value=0.0024 Score=53.15 Aligned_cols=72 Identities=17% Similarity=0.153 Sum_probs=51.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++++ +++.+...+ .|.+ ... +.+.+. -+++|+++++
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~---l~~~~~~~~~~Dv~---~~~-~~~~~~-~g~iD~lVnn 73 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVVCDLR---KDL-DLLFEK-VKEVDILVLN 73 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEECCTT---TCH-HHHHHH-SCCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHH---HHhcCCcEEEcchH---HHH-HHHHHH-hCCCcEEEec
Confidence 5899999988 9999999999999999 89999988755 445555443 2333 223 233322 2479999998
Q ss_pred cCC
Q 017052 271 IGD 273 (378)
Q Consensus 271 ~g~ 273 (378)
.|.
T Consensus 74 AG~ 76 (234)
T d1o5ia_ 74 AGG 76 (234)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.94 E-value=0.0013 Score=56.92 Aligned_cols=82 Identities=15% Similarity=0.249 Sum_probs=55.9
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hC--------CCcEE---eCCCCCCchHHHHH
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF--------GVTEF---LNPNDNNEPVQQVI 256 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~-~~--------g~~~v---i~~~~~~~~~~~~i 256 (378)
+.-+|+++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+. ++ +...+ .|.++ ..+..+.+
T Consensus 8 g~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~ 85 (297)
T d1yxma1 8 GLLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLV 85 (297)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC-HHHHHHHH
Confidence 3457999999988 9999999999999999 8999999988765432 11 22222 23331 33333334
Q ss_pred HHHh--CCCccEEEeccCC
Q 017052 257 KRIT--DGGADYSFECIGD 273 (378)
Q Consensus 257 ~~~~--~~~~d~vid~~g~ 273 (378)
.+.. .+++|+++++.|.
T Consensus 86 ~~~~~~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 86 KSTLDTFGKINFLVNNGGG 104 (297)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHhCCeEEEEeeccc
Confidence 4332 2479999998874
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=96.94 E-value=0.0011 Score=57.41 Aligned_cols=79 Identities=14% Similarity=0.190 Sum_probs=54.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-----HhCCCcE-Ee--CCCCCCchHHHHHHHH--hC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-----KAFGVTE-FL--NPNDNNEPVQQVIKRI--TD 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-----~~~g~~~-vi--~~~~~~~~~~~~i~~~--~~ 261 (378)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+ ++.|... .+ |..+ ..+..+.+... ..
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 101 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIKVA 101 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccC-hHHHHHHhhhhhhhc
Confidence 6899999988 9999999999999999 999999998775432 2344433 32 3331 22232223322 23
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 102 g~iDilvnnAg~ 113 (294)
T d1w6ua_ 102 GHPNIVINNAAG 113 (294)
T ss_dssp CSCSEEEECCCC
T ss_pred cccchhhhhhhh
Confidence 489999999875
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=96.93 E-value=0.00081 Score=55.62 Aligned_cols=99 Identities=15% Similarity=0.207 Sum_probs=67.0
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC--Cc--EEeCCCCCCchHHHHHHHHh
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VT--EFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g--~~--~vi~~~~~~~~~~~~i~~~~ 260 (378)
+.+..++++|++||-+|+| .|..++.+|+.. . +|++++.+++..+.+++.- .. .++..+ ....+ ..
T Consensus 62 ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d-~~~g~------~~ 131 (224)
T d1vbfa_ 62 MLDELDLHKGQKVLEIGTG-IGYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD-GTLGY------EE 131 (224)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC-GGGCC------GG
T ss_pred HHHHhhhcccceEEEecCC-CCHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCc-hhhcc------hh
Confidence 3477899999999999986 366677777764 4 8999999999888776631 11 122111 00111 11
Q ss_pred CCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 261 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.++||.|+-+.+-+......++.|+++ |++|..
T Consensus 132 ~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p 164 (224)
T d1vbfa_ 132 EKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP 164 (224)
T ss_dssp GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred hhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence 237999886655555566778899997 998874
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.92 E-value=0.0012 Score=56.59 Aligned_cols=79 Identities=22% Similarity=0.276 Sum_probs=54.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCc--E----EeCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT--E----FLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~--~----vi~~~~~~~~~~~~i~~~~- 260 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ ++.+.. . ..|..+ ..+..+.+.+..
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA 80 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC-HHHHHHHHHHHHH
Confidence 5899999988 9999999999999999 899999998876644 334432 1 234431 233333333332
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.|++|+++++.|.
T Consensus 81 ~~G~iDilVnnAG~ 94 (274)
T d1xhla_ 81 KFGKIDILVNNAGA 94 (274)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCceEEEeeccc
Confidence 2478999998773
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.91 E-value=0.00064 Score=57.77 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=54.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-----HHhCCCcEE---eCCCCCCchHHHHHHHHh--C
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK-----AKAFGVTEF---LNPNDNNEPVQQVIKRIT--D 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~-----l~~~g~~~v---i~~~~~~~~~~~~i~~~~--~ 261 (378)
+|+++||+|+ +++|.+.++.+...|+ +|+.++++.++.+. .++.|.... .|..+ ..+..+.+.+.. .
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL 85 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 5899999988 9999999999999999 89999998776532 234565432 24431 333333343332 3
Q ss_pred CCccEEEeccCC
Q 017052 262 GGADYSFECIGD 273 (378)
Q Consensus 262 ~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 86 g~iDilVnnAg~ 97 (260)
T d1h5qa_ 86 GPISGLIANAGV 97 (260)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCcEecccccc
Confidence 489999998874
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.87 E-value=0.00011 Score=61.80 Aligned_cols=97 Identities=18% Similarity=0.238 Sum_probs=60.9
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC----chHHHHHHHH-hCCCccEE
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN----EPVQQVIKRI-TDGGADYS 267 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~----~~~~~~i~~~-~~~~~d~v 267 (378)
+.+|||+|+ +++|.++++.+...|+ +|+.+++++++.. .....+..+... ....+.+... ..+++|++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l 75 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 75 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence 457899998 9999999999999999 8999988765321 111122221111 1112222232 23479999
Q ss_pred EeccCCh--------------------------HHHHHHHHHhccCCccEEEeccC
Q 017052 268 FECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 268 id~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+++.|.. ......+..|+++ |+++.++..
T Consensus 76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~ 130 (235)
T d1ooea_ 76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA 130 (235)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccH
Confidence 9988741 1123445677776 999998754
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.86 E-value=0.0022 Score=48.20 Aligned_cols=75 Identities=20% Similarity=0.356 Sum_probs=55.6
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
++++|.|.|.+|+.+++.+...|. .|++++.++++.+.++..+...++-... +.+. +.+..-..+|.++-++++.
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~gd~~-~~~~---l~~a~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIANAT-EENE---LLSLGIRNFEYVIVAIGAN 75 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEECCTT-CTTH---HHHHTGGGCSEEEECCCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceeeecc-cchh---hhccCCccccEEEEEcCch
Confidence 467888999999999999999999 8999999999999998888766553211 2222 2332222678888777653
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.83 E-value=0.0019 Score=54.51 Aligned_cols=80 Identities=20% Similarity=0.357 Sum_probs=52.6
Q ss_pred CCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCcEEeCCCC-CCchHHHHHHHHh--CC
Q 017052 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFLNPND-NNEPVQQVIKRIT--DG 262 (378)
Q Consensus 193 ~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~~vi~~~~-~~~~~~~~i~~~~--~~ 262 (378)
+|+++||+|+ | ++|++.++.+...|+ +|+...++++..+.++ ..+....+..+- +..+..+.+.... .+
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence 6899999998 5 799999999999999 8888888876554443 344444433221 1233333333322 24
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
++|+++++.|.
T Consensus 86 ~iDilVnnag~ 96 (256)
T d1ulua_ 86 GLDYLVHAIAF 96 (256)
T ss_dssp SEEEEEECCCC
T ss_pred CceEEEecccc
Confidence 79999988763
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.81 E-value=0.0041 Score=49.21 Aligned_cols=88 Identities=16% Similarity=0.236 Sum_probs=60.3
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCC--------CCchHHHHHHHHhCCCcc
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND--------NNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~--------~~~~~~~~i~~~~~~~~d 265 (378)
.+++.|+|+|.+|++++..+...|. .|+.+++++++.+.+++.+......... ...+..+.+. .+|
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD 74 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DAD 74 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCC
Confidence 3689999999999999999999999 9999999999999988765433211000 0112333332 689
Q ss_pred EEEeccCChH---HHHHHHHHhccC
Q 017052 266 YSFECIGDTG---MITTALQSCCDG 287 (378)
Q Consensus 266 ~vid~~g~~~---~~~~~~~~l~~~ 287 (378)
++|-++.... .+.+....+.++
T Consensus 75 ~iii~v~~~~~~~~~~~i~~~l~~~ 99 (184)
T d1bg6a2 75 VILIVVPAIHHASIAANIASYISEG 99 (184)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTT
T ss_pred EEEEEEchhHHHHHHHHhhhccCCC
Confidence 9999987642 233344455553
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.80 E-value=0.00094 Score=56.82 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=54.5
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hCCCc--E----EeCCCCCCchHHHHHHHHh-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT--E----FLNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~----~~g~~--~----vi~~~~~~~~~~~~i~~~~- 260 (378)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+.. . ..|..+ ..+..+.+.+..
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG 81 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC-HHHHHHHHHHHHH
Confidence 6889999988 9999999999999999 8999999988765543 33321 1 224431 233333343332
Q ss_pred -CCCccEEEeccCC
Q 017052 261 -DGGADYSFECIGD 273 (378)
Q Consensus 261 -~~~~d~vid~~g~ 273 (378)
.+++|+++++.|.
T Consensus 82 ~~g~iDilvnnAG~ 95 (264)
T d1spxa_ 82 KFGKLDILVNNAGA 95 (264)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HhCCCCEeeccccc
Confidence 2489999998873
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=96.80 E-value=0.0015 Score=55.30 Aligned_cols=79 Identities=25% Similarity=0.347 Sum_probs=52.9
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH-----HhCCCcEE-e--CCCCCCchHHHHHHHHhC-
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKA-----KAFGVTEF-L--NPNDNNEPVQQVIKRITD- 261 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~-~~~~~l-----~~~g~~~v-i--~~~~~~~~~~~~i~~~~~- 261 (378)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++ ++.+.+ +..|.... + |..+ ..+..+.+.+...
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ 80 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 6899999988 9999999999999999 899998864 444332 23454433 2 3331 2333333333322
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
|++|+++++.|.
T Consensus 81 ~G~iDiLVnnAG~ 93 (260)
T d1x1ta1 81 MGRIDILVNNAGI 93 (260)
T ss_dssp HSCCSEEEECCCC
T ss_pred hCCCcEEEeeccc
Confidence 479999999884
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.77 E-value=0.0021 Score=54.27 Aligned_cols=76 Identities=17% Similarity=0.227 Sum_probs=52.8
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CCCcc
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGAD 265 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~~~d 265 (378)
.+||+|+ +++|++.++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .|++|
T Consensus 3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTCCC
T ss_pred EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence 4588988 9999999999989999 899999999876544 34555432 24431 333333444332 24799
Q ss_pred EEEeccCC
Q 017052 266 YSFECIGD 273 (378)
Q Consensus 266 ~vid~~g~ 273 (378)
+++++.|.
T Consensus 81 ilVnnAG~ 88 (255)
T d1gega_ 81 VIVNNAGV 88 (255)
T ss_dssp EEEECCCC
T ss_pred EEEecccc
Confidence 99998874
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=96.76 E-value=0.0018 Score=54.97 Aligned_cols=102 Identities=20% Similarity=0.320 Sum_probs=70.4
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCcE-E-eCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE-F-LNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~~-v-i~~~~~~~~~~~~i~ 257 (378)
+....++++|++||=.|+|. |..++.+|+..|. .+|++++.+++..+.+++ +|... + +... + .. .
T Consensus 95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~--d--~~---~ 166 (266)
T d1o54a_ 95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR--D--IS---E 166 (266)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC--C--GG---G
T ss_pred HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec--c--cc---c
Confidence 44788999999999999864 7777788888752 289999999998877754 55432 2 2221 1 10 0
Q ss_pred HHhCCCccEEEeccCC-hHHHHHHHHHhccCCccEEEec
Q 017052 258 RITDGGADYSFECIGD-TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+....+|.|+--... ...+..+.+.|+++ |+++.+.
T Consensus 167 ~~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~ 204 (266)
T d1o54a_ 167 GFDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC 204 (266)
T ss_dssp CCSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred cccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence 1112267876644444 46789999999997 9998763
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.71 E-value=0.0081 Score=44.85 Aligned_cols=74 Identities=22% Similarity=0.365 Sum_probs=54.9
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|+|.|+|.+|..+++.+...|. .|++++.++++.+.++. ++...+. -+ ..-.+.+++..-..+|.++-+++..
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~vi~-Gd---~~~~~~l~~~~i~~a~~vv~~t~~d 76 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GD---CTKIKTLEDAGIEDADMYIAVTGKE 76 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SC---TTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhhcc-Cc---ccchhhhhhcChhhhhhhcccCCcH
Confidence 68999999999999999999999 99999999999887754 5654443 22 1122334443333789999888774
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.66 E-value=0.005 Score=47.98 Aligned_cols=86 Identities=22% Similarity=0.344 Sum_probs=58.8
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC-cEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~-~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|.|+|+|.+|..++..++..|. +|++.++++++.+.+++.+. +...+.. + .+ ...|+||-++...
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~~~----~---~~-----~~~DiIilavp~~ 68 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQDL----S---LL-----QTAKIIFLCTPIQ 68 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEESCG----G---GG-----TTCSEEEECSCHH
T ss_pred EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeeeec----c---cc-----cccccccccCcHh
Confidence 58899999999999988899999 99999999999999998885 3333221 1 11 2679999887642
Q ss_pred ---HHHHHHHHHhccCCccEEEec
Q 017052 275 ---GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 275 ---~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+++....+.++ ..++.++
T Consensus 69 ~~~~vl~~l~~~l~~~-~iv~~~~ 91 (165)
T d2f1ka2 69 LILPTLEKLIPHLSPT-AIVTDVA 91 (165)
T ss_dssp HHHHHHHHHGGGSCTT-CEEEECC
T ss_pred hhhhhhhhhhhhcccc-cceeecc
Confidence 2233333444543 4444443
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.66 E-value=0.0032 Score=53.09 Aligned_cols=83 Identities=23% Similarity=0.317 Sum_probs=54.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHHHhCCCcEE---eCCCCCCchHHHHHHH
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CEKAKAFGVTEF---LNPNDNNEPVQQVIKR 258 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~-------~~~l~~~g~~~v---i~~~~~~~~~~~~i~~ 258 (378)
.++|+.++||+|+ |++|++++..+...|+++++.+.++..+ .+.+++.|.... .|..+ ..+..+.+..
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d-~~~~~~~~~~ 83 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLGG 83 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHT
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch-HHHHHHhhcc
Confidence 4788999999988 9999999998888898557777665322 233445666442 24331 2333333333
Q ss_pred HhCC-CccEEEeccCC
Q 017052 259 ITDG-GADYSFECIGD 273 (378)
Q Consensus 259 ~~~~-~~d~vid~~g~ 273 (378)
+... +.|.++.+.|.
T Consensus 84 i~~~~~i~~vv~~ag~ 99 (259)
T d2fr1a1 84 IGDDVPLSAVFHAAAT 99 (259)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred cccccccccccccccc
Confidence 3333 68999988874
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.64 E-value=0.0034 Score=53.96 Aligned_cols=101 Identities=15% Similarity=0.150 Sum_probs=69.1
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
+.+++++++|++||=+|+|- |-.++.+|+..|+ +|++++.++++.+.+++ .|....+... ..++ ...
T Consensus 53 ~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~--~~d~-----~~~ 123 (291)
T d1kpia_ 53 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVR--IQGW-----EEF 123 (291)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEE--ECCG-----GGC
T ss_pred HHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhh--hhcc-----ccc
Confidence 55888999999999999863 4467789999999 99999999998665543 4543322111 0111 112
Q ss_pred CCCccEEEe-----ccCC----------hHHHHHHHHHhccCCccEEEec
Q 017052 261 DGGADYSFE-----CIGD----------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~~~~d~vid-----~~g~----------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
++.||.|+. .++. ...+..+.+.|+|+ |+++.-.
T Consensus 124 ~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~ 172 (291)
T d1kpia_ 124 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHT 172 (291)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEE
T ss_pred ccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEE
Confidence 347998774 3332 24577888999997 9988653
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.62 E-value=0.0077 Score=46.48 Aligned_cols=103 Identities=18% Similarity=0.272 Sum_probs=73.6
Q ss_pred hHHHHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 181 GLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 181 a~~al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
.+-++.+..+ .-.|++|+|.|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +. .+.+.+
T Consensus 10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~-------~~~~a~--- 77 (163)
T d1li4a1 10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT-------TMDEAC--- 77 (163)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHT---
T ss_pred HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee-------ehhhhh---
Confidence 4444545555 4589999999999999999999999999 999999998776555544542 22 122222
Q ss_pred hCCCccEEEeccCChH-HHHHHHHHhccCCccEEEeccCC
Q 017052 260 TDGGADYSFECIGDTG-MITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 260 ~~~~~d~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
...|+++-++|... .-.+-++.|+++ ..+..+|...
T Consensus 78 --~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghfd 114 (163)
T d1li4a1 78 --QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHFD 114 (163)
T ss_dssp --TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSST
T ss_pred --hhccEEEecCCCccchhHHHHHhccCC-eEEEEecccc
Confidence 25699998888743 455788899986 6677776544
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=96.58 E-value=0.0044 Score=49.42 Aligned_cols=99 Identities=8% Similarity=0.017 Sum_probs=65.1
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc------------------EEeCCCCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT------------------EFLNPNDN 248 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~------------------~vi~~~~~ 248 (378)
....+++|.+||..|+|. |..++.+|+. |. +|++++.+++..+.+++.... .++.-+
T Consensus 14 ~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 88 (201)
T d1pjza_ 14 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD-- 88 (201)
T ss_dssp HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC--
T ss_pred HHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccc--
Confidence 445789999999999863 7788888874 88 999999999999988763110 011000
Q ss_pred CchHHHHHHHHhCCCccEEEeccCC--------hHHHHHHHHHhccCCccEEEec
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
...+.... ...+|+|++...- ...+..+.+.|+++ |+++...
T Consensus 89 ~~~l~~~~----~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~ 138 (201)
T d1pjza_ 89 FFALTARD----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT 138 (201)
T ss_dssp CSSSTHHH----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred cccccccc----ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence 01111111 1168998875431 23567788899997 9876543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.52 E-value=0.00069 Score=56.69 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=52.0
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhC--CCccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD--GGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~--~~~d~vid 269 (378)
.|+++||+|+ +++|+++++.+...|+ +|+.+++++++.+.+. ....|..+ ..+..+.+.+... +++|++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~----~~~~Dv~~-~~~v~~~~~~~~~~~g~iDiLVn 79 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF----GVEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS 79 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE----EEECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCce----EEEEecCC-HHHHHHHHHHHHHhcCCceEEEe
Confidence 6899999988 8999999999999999 9999999876543221 12334432 2333333333322 47999999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 80 nAG~ 83 (237)
T d1uzma1 80 NAGL 83 (237)
T ss_dssp ECSC
T ss_pred eecc
Confidence 8874
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.49 E-value=0.005 Score=52.70 Aligned_cols=101 Identities=12% Similarity=0.126 Sum_probs=68.8
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
+.++.++++|++||=+|+|- |..++.+|+..|+ +|++++.++++.+.+++ .|....+... ..++ +. .
T Consensus 54 ~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~--~~d~----~~-~ 124 (285)
T d1kpga_ 54 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVL--LAGW----EQ-F 124 (285)
T ss_dssp HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEE--ESCG----GG-C
T ss_pred HHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHH--Hhhh----hc-c
Confidence 55788999999999999863 6778889999999 99999999998887755 2322111110 0011 11 1
Q ss_pred CCCccEEEe-----ccCC---hHHHHHHHHHhccCCccEEEec
Q 017052 261 DGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
++.+|.|+. .++. ...+..+.+.|+++ |+++.-.
T Consensus 125 ~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~ 166 (285)
T d1kpga_ 125 DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHT 166 (285)
T ss_dssp CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred cccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEE
Confidence 347887663 3332 24577788899997 9988643
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=96.48 E-value=0.0057 Score=51.07 Aligned_cols=100 Identities=17% Similarity=0.209 Sum_probs=62.6
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh--CCCc
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGA 264 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v-~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~--~~~~ 264 (378)
.+||+|+ +++|++.++.+...|+ +|+.. .+++++.+.+ ++.|.... .|..+ ..+..+.+.+.. .+++
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 80 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcCCC
Confidence 5788888 9999999999999999 77665 5566655443 34554432 24431 233333333332 2489
Q ss_pred cEEEeccCCh-------------------------HHHHHHHHHhc-cCCccEEEeccC
Q 017052 265 DYSFECIGDT-------------------------GMITTALQSCC-DGWGLAVTLGVP 297 (378)
Q Consensus 265 d~vid~~g~~-------------------------~~~~~~~~~l~-~~~G~~v~~g~~ 297 (378)
|+++++.|.. ...+.++..|. .++|++|.++..
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~ 139 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV 139 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence 9999988742 12334455552 234999999754
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=96.45 E-value=0.0065 Score=50.60 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=64.7
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCC------eEEEEcCChhhHHHH----HhCCCcEE---eCCCCCCchHHHHHHHHh-
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGAS------RIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT- 260 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~------~vi~v~~~~~~~~~l----~~~g~~~v---i~~~~~~~~~~~~i~~~~- 260 (378)
.|||+|+ +++|++++..+...|++ .++..+++.++.+.+ ++.|.... .|.++ ..+..+.+.+..
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHIVE 81 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHH
Confidence 4688888 99999999988888883 288888998876654 33454332 24432 233333333332
Q ss_pred -CCCccEEEeccCCh-------------------------HHHHHHHHHhcc-CCccEEEeccCC
Q 017052 261 -DGGADYSFECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGVPK 298 (378)
Q Consensus 261 -~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~ 298 (378)
.|++|+++++.|.. ...+.++..|.+ ++|+++.++...
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~ 146 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA 146 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence 24799999988742 123344555532 348999987543
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.44 E-value=0.0031 Score=52.06 Aligned_cols=95 Identities=16% Similarity=0.188 Sum_probs=64.2
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----CCCc-------EEeCCCCCCchHHHHHH
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVT-------EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~g~~-------~vi~~~~~~~~~~~~i~ 257 (378)
.+++|++||-+|+|. |..++.+|+..|. .+|++++.+++-.+.+++ .+.. .+...+ . ..
T Consensus 73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD---~-----~~ 143 (224)
T d1i1na_ 73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD---G-----RM 143 (224)
T ss_dssp TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC---G-----GG
T ss_pred ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee---c-----cc
Confidence 789999999999863 7777888887652 289999999987766543 2221 111111 0 00
Q ss_pred HHh-CCCccEEEeccCChHHHHHHHHHhccCCccEEEe
Q 017052 258 RIT-DGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 258 ~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
... .+.||+|+-+..-.......++.|+++ |++|..
T Consensus 144 ~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p 180 (224)
T d1i1na_ 144 GYAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP 180 (224)
T ss_dssp CCGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred ccchhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence 011 237999987666555667788999997 998874
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=96.41 E-value=0.0011 Score=55.63 Aligned_cols=100 Identities=22% Similarity=0.284 Sum_probs=68.8
Q ss_pred HHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE---EeCCCCCCchHHHHH
Q 017052 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVI 256 (378)
Q Consensus 184 al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~---vi~~~~~~~~~~~~i 256 (378)
.|....++++|++||=+|+|. |..+..+++..|+ +|++++.++...+.+++ .|... ++..+ ..++
T Consensus 24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d--~~~~---- 95 (245)
T d1nkva_ 24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--AAGY---- 95 (245)
T ss_dssp HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--CTTC----
T ss_pred HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH--Hhhc----
Confidence 355788999999999999853 5567778888898 99999999988776655 45432 22211 1111
Q ss_pred HHHhCCCccEEEecc------CChHHHHHHHHHhccCCccEEEe
Q 017052 257 KRITDGGADYSFECI------GDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 257 ~~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
...+.||+|+-.- .-...+.++.+.|+++ |+++..
T Consensus 96 --~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~ 136 (245)
T d1nkva_ 96 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIG 136 (245)
T ss_dssp --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEE
T ss_pred --cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEE
Confidence 1233899887421 1245678888999997 998775
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.40 E-value=0.016 Score=45.13 Aligned_cols=92 Identities=23% Similarity=0.287 Sum_probs=62.5
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhCCCc-EEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~~g~~-~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
++|+|+|.|.+|..++..++..|.. +|++++++++..+.+++.+.. ...... .. ......|+|+-|+.
T Consensus 2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~---~~-------~~~~~~dlIila~p 71 (171)
T d2g5ca2 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---AK-------VEDFSPDFVMLSSP 71 (171)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCG---GG-------GGGTCCSEEEECSC
T ss_pred CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhh---hh-------hhccccccccccCC
Confidence 4799999999999999999888843 799999999999999998863 333221 00 01125688888776
Q ss_pred ChH---HHHHHHHHhccCCccEEEeccC
Q 017052 273 DTG---MITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 273 ~~~---~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
... .+......+.++ ..++.++..
T Consensus 72 ~~~~~~vl~~l~~~~~~~-~ii~d~~s~ 98 (171)
T d2g5ca2 72 VRTFREIAKKLSYILSED-ATVTDQGSV 98 (171)
T ss_dssp HHHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred chhhhhhhhhhhcccccc-ccccccccc
Confidence 432 234445566664 556565543
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=96.38 E-value=0.0075 Score=50.58 Aligned_cols=93 Identities=25% Similarity=0.389 Sum_probs=62.2
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-EeCCCCCCchHHHHHHHHhCCCcc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
.++|++||=+|+|. |..++.+++ .|+ +|++++.+++..+.+++ .|... ++.. +..+ ....+.||
T Consensus 118 ~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~~-----d~~~---~~~~~~fD 186 (254)
T d2nxca1 118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEG-----SLEA---ALPFGPFD 186 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEES-----CHHH---HGGGCCEE
T ss_pred cCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHHHHcCCceeEEec-----cccc---cccccccc
Confidence 68999999999863 566665554 687 89999999998877764 44432 2221 2211 12234899
Q ss_pred EEEeccCCh---HHHHHHHHHhccCCccEEEec
Q 017052 266 YSFECIGDT---GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 266 ~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g 295 (378)
+|+-..... ..+..+.+.|+++ |+++..|
T Consensus 187 ~V~ani~~~~l~~l~~~~~~~LkpG-G~lilSg 218 (254)
T d2nxca1 187 LLVANLYAELHAALAPRYREALVPG-GRALLTG 218 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred hhhhccccccHHHHHHHHHHhcCCC-cEEEEEe
Confidence 998654432 3355677889997 9998754
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.37 E-value=0.0023 Score=44.81 Aligned_cols=36 Identities=42% Similarity=0.487 Sum_probs=32.4
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
+|++|+|+|.|..|+++++++...|+ +|++.+.+..
T Consensus 4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~ 39 (93)
T d2jfga1 4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMT 39 (93)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSS
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcC
Confidence 57899999999999999999999999 8999987543
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.34 E-value=0.0048 Score=52.70 Aligned_cols=101 Identities=11% Similarity=0.140 Sum_probs=68.0
Q ss_pred HHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHH
Q 017052 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 184 al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
.+.+..++++|++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++ .|....+... ..+. ..
T Consensus 43 ~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~--~~d~----~~- 113 (280)
T d2fk8a1 43 LNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVL--LQGW----ED- 113 (280)
T ss_dssp HHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEE--ESCG----GG-
T ss_pred HHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhh--hhhh----hh-
Confidence 356788999999999999863 3456778888899 99999999999877765 3432211110 0011 01
Q ss_pred hCCCccEEEe-----ccCC---hHHHHHHHHHhccCCccEEEe
Q 017052 260 TDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 ~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.++.+|.|+. .++. +..+..+.+.|+++ |+++.-
T Consensus 114 ~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~ 155 (280)
T d2fk8a1 114 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQ 155 (280)
T ss_dssp CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEE
T ss_pred hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEE
Confidence 1347888753 3332 24577888999997 998864
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=96.32 E-value=0.0064 Score=51.57 Aligned_cols=80 Identities=15% Similarity=0.249 Sum_probs=52.4
Q ss_pred CCCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEe--CCCCCCchHHHHHHHHh--
Q 017052 192 SKGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFL--NPNDNNEPVQQVIKRIT-- 260 (378)
Q Consensus 192 ~~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi--~~~~~~~~~~~~i~~~~-- 260 (378)
-+|+++||+|+ | ++|.+.++.+...|+ +|+.++++++..+.+++ .+...+. +.. .+.+..+.+.+..
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~ 80 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVS-KEEHFKSLYNSVKKD 80 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeeccc-chhhHHHHHHHHHHH
Confidence 46999999986 5 699999999999999 89999988754443332 3322332 332 1333333333332
Q ss_pred CCCccEEEeccCC
Q 017052 261 DGGADYSFECIGD 273 (378)
Q Consensus 261 ~~~~d~vid~~g~ 273 (378)
.+.+|+++.+.|.
T Consensus 81 ~g~id~lV~nag~ 93 (274)
T d2pd4a1 81 LGSLDFIVHSVAF 93 (274)
T ss_dssp TSCEEEEEECCCC
T ss_pred cCCCCeEEeeccc
Confidence 2478999988774
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.32 E-value=0.0016 Score=54.79 Aligned_cols=77 Identities=14% Similarity=0.250 Sum_probs=49.9
Q ss_pred CeEEEEcc-ChHHHHHHHHHH---HcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHH---HHHHHhC
Q 017052 195 STVVIFGL-GTVGLSVAQGAK---ARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQ---VIKRITD 261 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~---~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~---~i~~~~~ 261 (378)
++|||+|+ +++|+++++.+. ..|+ +|+.+++++++.+.+++ .+--.+ +|..+ ..+..+ .+.....
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEGVTK 80 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHHHHG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc-HHHHHHHHhhhHHHhh
Confidence 68999998 999999886554 3577 89999999887665543 222222 24432 233333 3333333
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+++|+++++.|.
T Consensus 81 ~~~iDiLvnNAg~ 93 (248)
T d1snya_ 81 DQGLNVLFNNAGI 93 (248)
T ss_dssp GGCCSEEEECCCC
T ss_pred cCCcceEEeeccc
Confidence 389999998763
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=96.19 E-value=0.011 Score=48.71 Aligned_cols=101 Identities=19% Similarity=0.164 Sum_probs=67.7
Q ss_pred HHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHH
Q 017052 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIK 257 (378)
Q Consensus 184 al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~ 257 (378)
.|...+++++|++||=+|+|. |..+..+++. +. +|++++.++...+.+++ .+.+. ++..+ ..++
T Consensus 7 ~l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d--~~~~----- 76 (234)
T d1xxla_ 7 LMIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGT--AESL----- 76 (234)
T ss_dssp HHHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB--TTBC-----
T ss_pred HHHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhcccccccccccccc--cccc-----
Confidence 356889999999999999863 6777777774 56 89999999987766644 33332 22111 1111
Q ss_pred HHhCCCccEEEeccC------ChHHHHHHHHHhccCCccEEEec
Q 017052 258 RITDGGADYSFECIG------DTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+.++.||+|+-.-. -...+.++.+.|+++ |+++...
T Consensus 77 ~~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~ 119 (234)
T d1xxla_ 77 PFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD 119 (234)
T ss_dssp CSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence 112347999885332 135688899999997 9988753
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=96.16 E-value=0.0093 Score=45.80 Aligned_cols=100 Identities=22% Similarity=0.367 Sum_probs=72.9
Q ss_pred HHHhhcC-CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 184 AAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 184 al~~~~~-~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
++.+..+ .-.|++++|.|-|-+|.-.++-++.+|+ +|++++.++-+.-.+.--|. .+. ...+.+ .
T Consensus 12 ~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf-~v~-------~~~~a~-----~ 77 (163)
T d1v8ba1 12 GLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGF-NVV-------TLDEIV-----D 77 (163)
T ss_dssp HHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTC-EEC-------CHHHHT-----T
T ss_pred HHHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCC-ccC-------chhHcc-----c
Confidence 3434444 4689999999999999999999999999 99999999976555543343 222 222222 2
Q ss_pred CccEEEeccCChHH-HHHHHHHhccCCccEEEeccCC
Q 017052 263 GADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 263 ~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
..|+++-++|.... -.+-+..|+++ ..+..+|...
T Consensus 78 ~aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~GHfd 113 (163)
T d1v8ba1 78 KGDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIGHFD 113 (163)
T ss_dssp TCSEEEECCSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred cCcEEEEcCCCCccccHHHHHHhhCC-eEEEeccccc
Confidence 57999999998653 55778899986 7777777654
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.16 E-value=0.017 Score=48.60 Aligned_cols=103 Identities=17% Similarity=0.268 Sum_probs=68.9
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----C---CCcEEeCCCCCCchHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----F---GVTEFLNPNDNNEPVQQVI 256 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~----~---g~~~vi~~~~~~~~~~~~i 256 (378)
+....+++||++||=.|+|. |.+++.+|+..|. .+|++++.+++..+.+++ + ..+.+.... .+..+
T Consensus 88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~---~d~~~-- 161 (264)
T d1i9ga_ 88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV---SDLAD-- 161 (264)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC---SCGGG--
T ss_pred HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe---ccccc--
Confidence 44778999999999998753 7778888888763 289999999998888765 1 122221110 01100
Q ss_pred HHHhCCCccEEE-eccCChHHHHHHHHHhccCCccEEEe
Q 017052 257 KRITDGGADYSF-ECIGDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 257 ~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+..+.||.|| |.-.-...+..+.+.|+++ |+++.+
T Consensus 162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~ 199 (264)
T d1i9ga_ 162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVY 199 (264)
T ss_dssp CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEE
T ss_pred ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEE
Confidence 011223789766 5433346788999999997 999876
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.001 Score=55.32 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=65.3
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc---EEeCCCCCCchHHHHHHHHhCCCccEE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT---EFLNPNDNNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~---~vi~~~~~~~~~~~~i~~~~~~~~d~v 267 (378)
..+|.+||-+|+|. |..+..+++..+. ++++++.++...+.+++.... .+... ..+.......+..+.||.|
T Consensus 51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~fD~i 125 (229)
T d1zx0a1 51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL---KGLWEDVAPTLPDGHFDGI 125 (229)
T ss_dssp TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE---ESCHHHHGGGSCTTCEEEE
T ss_pred ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhcccccccc---cccccccccccccccccce
Confidence 46889999999863 6777888887666 899999999999888764321 11111 1123333334444588877
Q ss_pred E-eccCCh----------HHHHHHHHHhccCCccEEEe
Q 017052 268 F-ECIGDT----------GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 268 i-d~~g~~----------~~~~~~~~~l~~~~G~~v~~ 294 (378)
+ |.+... ..+..+.+.|+++ |+++..
T Consensus 126 ~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~ 162 (229)
T d1zx0a1 126 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC 162 (229)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred eecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence 4 765431 3566788899997 998764
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=96.09 E-value=0.0054 Score=50.82 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=67.2
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
.+++.+||=+|+| .|..+..+++ .|+ +|++++.+++..+.+++-+...++..+ ..++ .+..+.||+|+-.
T Consensus 40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~--~~~l-----~~~~~~fD~ii~~ 109 (246)
T d2avna1 40 LKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAK--AEDL-----PFPSGAFEAVLAL 109 (246)
T ss_dssp CCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECC--TTSC-----CSCTTCEEEEEEC
T ss_pred cCCCCEEEEECCC-Cchhcccccc-cce-EEEEeeccccccccccccccccccccc--cccc-----ccccccccceeee
Confidence 5578899988987 5888888876 588 899999999999999987776665543 1121 1223479988853
Q ss_pred cC-------ChHHHHHHHHHhccCCccEEEe
Q 017052 271 IG-------DTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 271 ~g-------~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.. -...+..+.++|+++ |.++..
T Consensus 110 ~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~ 139 (246)
T d2avna1 110 GDVLSYVENKDKAFSEIRRVLVPD-GLLIAT 139 (246)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence 32 124577888999997 987754
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.07 E-value=0.0023 Score=55.86 Aligned_cols=105 Identities=19% Similarity=0.188 Sum_probs=66.4
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHh----CC-----------CcEEe-CCCC
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA----FG-----------VTEFL-NPND 247 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~----~g-----------~~~vi-~~~~ 247 (378)
+....++++|++||=.|+|. |.+++.+|+..|.+ +|++++.+++..+.+++ ++ .+.+. ...+
T Consensus 90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d 168 (324)
T d2b25a1 90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 168 (324)
T ss_dssp HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence 34678999999999998864 88888899887642 89999999998887754 11 11111 0010
Q ss_pred CCchHHHHHHHHhCCCccEEE-eccCChHHHHHHHHHhccCCccEEEec
Q 017052 248 NNEPVQQVIKRITDGGADYSF-ECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
-.++ ...+..+.||.|| |--.....+.++.+.|+++ |+++.+-
T Consensus 169 -i~~~---~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~ 212 (324)
T d2b25a1 169 -ISGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV 212 (324)
T ss_dssp -TTCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred -hhhc---ccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence 0111 0111123678766 5432235788999999997 9998874
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=96.05 E-value=0.0065 Score=49.93 Aligned_cols=100 Identities=16% Similarity=0.199 Sum_probs=67.7
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~ 258 (378)
|.+.++++++++||=+|+| .|..+..+++. |. ++++++.+++..+.+++ .+.+. ++..+ ..++ .
T Consensus 7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d--~~~l-----~ 76 (231)
T d1vl5a_ 7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGD--AEQM-----P 76 (231)
T ss_dssp HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC--C-CC-----C
T ss_pred HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhcccccccccccccccc--cccc-----c
Confidence 4577899999999999986 46666677755 66 89999999987776643 45443 22222 1111 1
Q ss_pred HhCCCccEEEeccC-----C-hHHHHHHHHHhccCCccEEEec
Q 017052 259 ITDGGADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 259 ~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+..+.||+|+-.-. . ...+.++.+.|+++ |+++...
T Consensus 77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~ 118 (231)
T d1vl5a_ 77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD 118 (231)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence 12347899884322 2 25678899999997 9988764
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.04 E-value=0.0013 Score=55.59 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=50.4
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC----CcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG----VTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g----~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+.||+|+ +++|++.+..+...|+ +|+..+++.++.+.++..+ ...+.+.+ +...+.+.+.+.. |++|+++++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~-~~~~~~~~~~~~~-G~iDiLVnN 78 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQ-EPAELIEAVTSAY-GQVDVLVSN 78 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCC-SHHHHHHHHHHHH-SCCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHH-HHHHHHHHHHHHc-CCCCEEEEC
Confidence 6899988 8999999999999999 8999999888877766532 22222221 1223333333322 479999987
Q ss_pred cC
Q 017052 271 IG 272 (378)
Q Consensus 271 ~g 272 (378)
.|
T Consensus 79 Ag 80 (252)
T d1zmta1 79 DI 80 (252)
T ss_dssp CC
T ss_pred Cc
Confidence 65
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.00 E-value=0.027 Score=44.53 Aligned_cols=99 Identities=17% Similarity=0.163 Sum_probs=63.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEeCCCCCCchHHHHHHHHhC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi~~~~~~~~~~~~i~~~~~ 261 (378)
...++++|++||=+|+|. |..++.+|+. +. +|++++.+++..+.+++ +|.. .+-.. ..+..+... ..
T Consensus 27 ~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~---~gda~~~~~--~~ 98 (186)
T d1l3ia_ 27 CLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEALC--KI 98 (186)
T ss_dssp HHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHHT--TS
T ss_pred HhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEE---ECchhhccc--cc
Confidence 456889999999998742 4445566654 44 89999999988777754 5542 22111 112222221 12
Q ss_pred CCccEEEeccCC---hHHHHHHHHHhccCCccEEEe
Q 017052 262 GGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 262 ~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+|.|+-..+. .+.++.+.+.|+++ |+++..
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 133 (186)
T d1l3ia_ 99 PDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVT 133 (186)
T ss_dssp CCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEE
T ss_pred CCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEE
Confidence 378988854332 34577788889997 998765
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=95.99 E-value=0.063 Score=41.21 Aligned_cols=89 Identities=16% Similarity=0.280 Sum_probs=62.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChH
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 275 (378)
+|-|+|.|.+|...+.-+...|. +|++.++++++.+.+++.+.... .+..+.++ ..|+||-|+..+.
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~~-----~~d~ii~~v~~~~ 68 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-------STAKAIAE-----QCDVIITMLPNSP 68 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-------SSHHHHHH-----HCSEEEECCSSHH
T ss_pred EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-------ccHHHHHh-----CCCeEEEEcCCHH
Confidence 57789999999999988888999 89999999999999998876432 12223333 3688888887655
Q ss_pred HHHHH-------HHHhccCCccEEEeccCC
Q 017052 276 MITTA-------LQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 276 ~~~~~-------~~~l~~~~G~~v~~g~~~ 298 (378)
..... ...+.++ ..+++++...
T Consensus 69 ~v~~v~~~~~~~~~~~~~g-~iiid~sT~~ 97 (161)
T d1vpda2 69 HVKEVALGENGIIEGAKPG-TVLIDMSSIA 97 (161)
T ss_dssp HHHHHHHSTTCHHHHCCTT-CEEEECSCCC
T ss_pred HHHHHHhCCcchhhccCCC-CEEEECCCCC
Confidence 55443 3344553 5556655443
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=95.97 E-value=0.017 Score=48.33 Aligned_cols=82 Identities=15% Similarity=0.237 Sum_probs=53.2
Q ss_pred CCCCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCCC-CCchHHHHHHHHhC-
Q 017052 191 ISKGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPND-NNEPVQQVIKRITD- 261 (378)
Q Consensus 191 ~~~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~-~~~~~~~~i~~~~~- 261 (378)
.-+|+++||+|+ | ++|.+.+..+...|+ +|+.+.++++..+.+++ .+....+..+. +..+..........
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV 80 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence 347899999987 6 689999999999999 89888888765554433 44444332221 12333333333332
Q ss_pred -CCccEEEeccCC
Q 017052 262 -GGADYSFECIGD 273 (378)
Q Consensus 262 -~~~d~vid~~g~ 273 (378)
+..|+.+++.+.
T Consensus 81 ~~~~d~~v~~a~~ 93 (258)
T d1qsga_ 81 WPKFDGFVHSIGF 93 (258)
T ss_dssp CSSEEEEEECCCC
T ss_pred ccccceEEEeecc
Confidence 277999987653
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.86 E-value=0.052 Score=41.59 Aligned_cols=90 Identities=16% Similarity=0.264 Sum_probs=54.5
Q ss_pred eEEEEccChHHH-HHHHHHHHcCCCeEEEEcC-Ch--hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHh-CCCccEEEec
Q 017052 196 TVVIFGLGTVGL-SVAQGAKARGASRIIGVDT-NP--EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGGADYSFEC 270 (378)
Q Consensus 196 ~VLI~Gag~vG~-~aiqla~~~g~~~vi~v~~-~~--~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~-~~~~d~vid~ 270 (378)
+|-|+|+|.+|. .++++.+.....+++++.+ +. ....+++++|..... ... +.+.+.. ..++|+||++
T Consensus 6 rvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~------~~~-d~l~~~~~~~~iDiVf~A 78 (157)
T d1nvmb1 6 KVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGV-EGLIKLPEFADIDFVFDA 78 (157)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHH-HHHHHSGGGGGEEEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc------cce-eeeeecccccccCEEEEc
Confidence 788999999987 5678887664437777754 43 345677888875542 122 2333222 2379999999
Q ss_pred cCChHHHHHH--HHHhccCCccEEEe
Q 017052 271 IGDTGMITTA--LQSCCDGWGLAVTL 294 (378)
Q Consensus 271 ~g~~~~~~~~--~~~l~~~~G~~v~~ 294 (378)
+......... .+.+.. |.+|.-
T Consensus 79 Tpag~h~~~~~~~~aa~~--G~~VID 102 (157)
T d1nvmb1 79 TSASAHVQNEALLRQAKP--GIRLID 102 (157)
T ss_dssp SCHHHHHHHHHHHHHHCT--TCEEEE
T ss_pred CCchhHHHhHHHHHHHHc--CCEEEE
Confidence 8754444433 333554 554443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.76 E-value=0.014 Score=47.56 Aligned_cols=72 Identities=19% Similarity=0.199 Sum_probs=46.8
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
.+|||+|+ |.+|..++..+...|.. .++.+.+++++.+.+.. +...+. +.. + . +.+.+.. .++|.|+.+.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~~d~~--~--~-~~~~~~~-~~~d~vi~~a 76 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFIGDIT--D--A-DSINPAF-QGIDALVILT 76 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEECCTT--S--H-HHHHHHH-TTCSEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEEeeec--c--c-ccccccc-ccceeeEEEE
Confidence 68999998 99999999999888863 46777788877665432 333322 222 1 2 1222222 2689999887
Q ss_pred CC
Q 017052 272 GD 273 (378)
Q Consensus 272 g~ 273 (378)
+.
T Consensus 77 ~~ 78 (252)
T d2q46a1 77 SA 78 (252)
T ss_dssp CC
T ss_pred ee
Confidence 53
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=95.68 E-value=0.026 Score=47.86 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=68.9
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~ 257 (378)
|.....+++|.+||=+|+| .|..+..+|+..|+ +|++++.++...+.+++ .|.. .++..+ ..++
T Consensus 59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d--~~~l----- 129 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS--FLEI----- 129 (282)
T ss_dssp HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC--TTSC-----
T ss_pred HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhcccccccccccccccccc--cccc-----
Confidence 4456789999999999986 36677788888898 89999999988776654 3332 122221 1111
Q ss_pred HHhCCCccEEEeccC-----C-hHHHHHHHHHhccCCccEEEecc
Q 017052 258 RITDGGADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 258 ~~~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+..+.||+|+-.-. . ...+.++.+.|+++ |+++....
T Consensus 130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~ 173 (282)
T d2o57a1 130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP 173 (282)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 112237899874321 1 24678899999997 99887643
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.66 E-value=0.0075 Score=50.35 Aligned_cols=48 Identities=29% Similarity=0.329 Sum_probs=39.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcE
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE 241 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~ 241 (378)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++...
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~ 53 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNC 53 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCCc
Confidence 6899999988 9999999999999999 899999988776544 4465443
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=95.62 E-value=0.01 Score=49.99 Aligned_cols=82 Identities=12% Similarity=0.244 Sum_probs=53.4
Q ss_pred CCCCCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhhH-H-HHHhCCCcE---EeCCCC--CCchHHHHHHHH
Q 017052 190 DISKGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKC-E-KAKAFGVTE---FLNPND--NNEPVQQVIKRI 259 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~~-~-~l~~~g~~~---vi~~~~--~~~~~~~~i~~~ 259 (378)
+.-+|+++||+|+ | ++|.+.++.+...|+ +|+.+.++.++. + ..++++... ..+..+ +.....+.+.+.
T Consensus 2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~ 80 (268)
T d2h7ma1 2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEA 80 (268)
T ss_dssp CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhc
Confidence 3457899999985 4 599999999999999 888888877664 3 334455433 223331 112333444443
Q ss_pred hC--CCccEEEeccC
Q 017052 260 TD--GGADYSFECIG 272 (378)
Q Consensus 260 ~~--~~~d~vid~~g 272 (378)
.. +.+|+++.+.|
T Consensus 81 ~~~~~~ld~~i~~ag 95 (268)
T d2h7ma1 81 IGAGNKLDGVVHSIG 95 (268)
T ss_dssp HCTTCCEEEEEECCC
T ss_pred cccCCCcceeeeccc
Confidence 33 26899998887
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.08 Score=45.84 Aligned_cols=104 Identities=18% Similarity=0.190 Sum_probs=69.0
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-----------CC----cEEeCCCCCC
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-----------GV----TEFLNPNDNN 249 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-----------g~----~~vi~~~~~~ 249 (378)
+.+..+++++++||=+|+| .|..++++|+..++.++++++.++...+.+++. |. -.++..+-.+
T Consensus 143 ~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~ 221 (328)
T d1nw3a_ 143 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS 221 (328)
T ss_dssp HHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred HHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence 4577889999999988886 488889999999987899999999877666431 21 1233222113
Q ss_pred chHHHHHHHHhCCCccEEEec-cC-Ch---HHHHHHHHHhccCCccEEEec
Q 017052 250 EPVQQVIKRITDGGADYSFEC-IG-DT---GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~-~g-~~---~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.+.+. .+|+|+-. .- .+ ..+.+.++.|+++ |++|..-
T Consensus 222 ~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~ 266 (328)
T d1nw3a_ 222 EEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK 266 (328)
T ss_dssp HHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred cccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence 33433332 25787732 11 12 3466778889997 9998764
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.55 E-value=0.034 Score=43.35 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=64.2
Q ss_pred eEEEEccChHHHHHHHHHHHcC-CCeEEEEcC--ChhhHHHHHhCCCcEEeCCCCCCchHHH-------HHHHHhCCCcc
Q 017052 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDT--NPEKCEKAKAFGVTEFLNPNDNNEPVQQ-------VIKRITDGGAD 265 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~--~~~~~~~l~~~g~~~vi~~~~~~~~~~~-------~i~~~~~~~~d 265 (378)
+|.|+|.|-+|+.+++.+.... . +++++-. .......+..++.+......+....+.+ .+.++ ..++|
T Consensus 4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vD 81 (172)
T d2czca2 4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDL-LEKVD 81 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHH-HTTCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhh-hccCC
Confidence 6899999999999998876543 5 6666632 3345556667776655432210011110 01111 12699
Q ss_pred EEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 266 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+|+||+|.-...+.+-..+..+ -+.|.++....
T Consensus 82 vViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~~ 114 (172)
T d2czca2 82 IIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA 114 (172)
T ss_dssp EEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG
T ss_pred EEEECCCCCCCHHHHHHHHHcC-CCEEEECCCCc
Confidence 9999999866677777888886 78888776543
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.54 E-value=0.028 Score=47.83 Aligned_cols=77 Identities=19% Similarity=0.222 Sum_probs=45.9
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCe--EEEEcCChhhHH----HHHhC---CCcE---EeCCCCCCchHHHHHHHHhCC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASR--IIGVDTNPEKCE----KAKAF---GVTE---FLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~--vi~v~~~~~~~~----~l~~~---g~~~---vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.|||+|+ +++|++++..+...|++. ++.+.++.++.+ .++++ +... ..|.. +..+....+.+...+
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR-DSKSVAAARERVTEG 82 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTT-CHHHHHHHHHTCTTS
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEecccc-chHhhhhhhhhcccc
Confidence 4577788 999999999998899832 333344444332 33333 2222 23443 234444445554456
Q ss_pred CccEEEeccCC
Q 017052 263 GADYSFECIGD 273 (378)
Q Consensus 263 ~~d~vid~~g~ 273 (378)
.+|+++++.|.
T Consensus 83 ~idilvnnag~ 93 (285)
T d1jtva_ 83 RVDVLVCNAGL 93 (285)
T ss_dssp CCSEEEECCCC
T ss_pred chhhhhhcccc
Confidence 89999998874
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.51 E-value=0.034 Score=44.44 Aligned_cols=87 Identities=17% Similarity=0.185 Sum_probs=59.2
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..++++++..|+ +|++.++..+..... .+. . ..++.+.+.+ .|+|+-+..
T Consensus 42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~----~----~~~l~~~l~~-----sDii~~~~p 105 (197)
T d1j4aa1 42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGY----Y----VDSLDDLYKQ-----ADVISLHVP 105 (197)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTC----B----CSCHHHHHHH-----CSEEEECSC
T ss_pred cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--cee----e----eccccccccc-----cccccccCC
Confidence 48899999999999999999999999 999998765433222 121 1 1234444443 688887654
Q ss_pred ChH-----HHHHHHHHhccCCccEEEecc
Q 017052 273 DTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+. .-...+..|+++ ..+|.++-
T Consensus 106 lt~~T~~li~~~~l~~mk~~-a~lIN~sR 133 (197)
T d1j4aa1 106 DVPANVHMINDESIAKMKQD-VVIVNVSR 133 (197)
T ss_dssp CCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred ccccccccccHHHHhhhCCc-cEEEecCc
Confidence 321 124667888886 77777743
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=95.48 E-value=0.017 Score=49.96 Aligned_cols=74 Identities=23% Similarity=0.326 Sum_probs=46.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC-----ChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEE
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-----NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYS 267 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~-----~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~v 267 (378)
.+|||+|+ |-+|..++..+...|. +|++++. ..++.+.+...+.-.++..+-.+.+ .+.++..+ ++|+|
T Consensus 1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~---~l~~~~~~~~~d~V 76 (338)
T d1orra_ 1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN---DVTRLITKYMPDSC 76 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHH---HHHHHHHHHCCSEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHH---HHHHHHHhcCCceE
Confidence 37999998 9999999999988899 8999853 2223344444443333322201211 22333233 78999
Q ss_pred EeccC
Q 017052 268 FECIG 272 (378)
Q Consensus 268 id~~g 272 (378)
|.+..
T Consensus 77 ih~aa 81 (338)
T d1orra_ 77 FHLAG 81 (338)
T ss_dssp EECCC
T ss_pred Eeecc
Confidence 99875
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=95.44 E-value=0.012 Score=51.46 Aligned_cols=46 Identities=22% Similarity=0.333 Sum_probs=39.0
Q ss_pred CCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 190 ~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
-+++|++|||+|+ |-+|..++..+...|. +|+++.++.++.+.++.
T Consensus 7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~ 53 (342)
T d1y1pa1 7 VLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQK 53 (342)
T ss_dssp SSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHH
Confidence 3678999999998 8899999988888899 89999898877665543
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.42 E-value=0.12 Score=39.58 Aligned_cols=46 Identities=20% Similarity=0.266 Sum_probs=40.0
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~ 241 (378)
++|-++|.|.+|...+.-+...|. .|++.++++++.+.+.+.+...
T Consensus 2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~ 47 (162)
T d3cuma2 2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASA 47 (162)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccc
Confidence 468899999999998888888899 9999999999999998887643
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.41 E-value=0.091 Score=39.80 Aligned_cols=83 Identities=22% Similarity=0.254 Sum_probs=56.5
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|.++|+|.+|.+.++-+...|..++++.++++++.+.+++ +|....-+.+ . + ...|+||=++- |
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~----~----v-----~~~Div~lavk-P 67 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLP----E----L-----HSDDVLILAVK-P 67 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCC----C----C-----CTTSEEEECSC-H
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccc----c----c-----cccceEEEecC-H
Confidence 58889999999998874444453499999999998877755 6764433222 1 1 14688888876 4
Q ss_pred HHHHHHHHHhccCCccEEE
Q 017052 275 GMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 275 ~~~~~~~~~l~~~~G~~v~ 293 (378)
..+...++-+.+. ++++.
T Consensus 68 ~~~~~v~~~l~~~-~~~vi 85 (152)
T d1yqga2 68 QDMEAACKNIRTN-GALVL 85 (152)
T ss_dssp HHHHHHHTTCCCT-TCEEE
T ss_pred HHHHHhHHHHhhc-ccEEe
Confidence 5666777666664 55443
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.40 E-value=0.017 Score=46.39 Aligned_cols=81 Identities=28% Similarity=0.330 Sum_probs=61.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|++|+|.|.|.+|..+++++...|+ +|++.+.+.++.+....+|.+.+ ..+ + +..-+.|+.+=|.
T Consensus 25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~~----~-------~~~~~~DI~iPcA 91 (201)
T d1c1da1 25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALE----D-------VLSTPCDVFAPCA 91 (201)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGG----G-------GGGCCCSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Ccc----c-------cccccceeeeccc
Confidence 478999999999999999999999999 99999999999999988887543 211 1 1122678888776
Q ss_pred CChHHHHHHHHHhc
Q 017052 272 GDTGMITTALQSCC 285 (378)
Q Consensus 272 g~~~~~~~~~~~l~ 285 (378)
.+...-....+.++
T Consensus 92 ~~~~I~~~~a~~i~ 105 (201)
T d1c1da1 92 MGGVITTEVARTLD 105 (201)
T ss_dssp CSCCBCHHHHHHCC
T ss_pred ccccccHHHHhhhh
Confidence 65444445555554
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.37 E-value=0.024 Score=46.41 Aligned_cols=99 Identities=16% Similarity=0.291 Sum_probs=61.0
Q ss_pred cCCCCCCeEEEEccC--hHHHHHHHHHHHcCC---CeEEEEcCChhhHHHHHh---------CCCcEE--eCCCCCCchH
Q 017052 189 ADISKGSTVVIFGLG--TVGLSVAQGAKARGA---SRIIGVDTNPEKCEKAKA---------FGVTEF--LNPNDNNEPV 252 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag--~vG~~aiqla~~~g~---~~vi~v~~~~~~~~~l~~---------~g~~~v--i~~~~~~~~~ 252 (378)
..+++|++||.+|+| -...++.+++...|. .+|++++.+++-.+.+++ .+...+ +..+ ....+
T Consensus 76 ~~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d-~~~~~ 154 (223)
T d1r18a_ 76 DHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD-GRKGY 154 (223)
T ss_dssp TTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC-GGGCC
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecc-ccccc
Confidence 378999999999873 344445555555553 279999999876665533 122222 2111 00000
Q ss_pred HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEE-ec
Q 017052 253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVT-LG 295 (378)
Q Consensus 253 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~-~g 295 (378)
...++||.|+-+.+-+..-...++.|+++ |++|. ++
T Consensus 155 ------~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~pvg 191 (223)
T d1r18a_ 155 ------PPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPVG 191 (223)
T ss_dssp ------GGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred ------ccccceeeEEEEeechhchHHHHHhcCCC-cEEEEEEe
Confidence 11237998887666555556788899997 99977 44
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.35 E-value=0.043 Score=48.96 Aligned_cols=105 Identities=20% Similarity=0.216 Sum_probs=68.7
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC---------------CCcEE-eCCCCC
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF---------------GVTEF-LNPNDN 248 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~---------------g~~~v-i~~~~~ 248 (378)
+.+..++++|+++|=+|+| .|..++++|+..|+.++++++.++...+.+++. +.... +.....
T Consensus 208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~ 286 (406)
T d1u2za_ 208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 286 (406)
T ss_dssp HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence 4478899999999888887 599999999999977899999999877766541 11111 111111
Q ss_pred CchHHHHHHHHhCCCccEEEec-c-CC---hHHHHHHHHHhccCCccEEEec
Q 017052 249 NEPVQQVIKRITDGGADYSFEC-I-GD---TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~-~-g~---~~~~~~~~~~l~~~~G~~v~~g 295 (378)
......... ..+|+|+-. . -. ...+.+.++.|++| |++|...
T Consensus 287 ~~~~~d~~~----~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~ 333 (406)
T d1u2za_ 287 DNNRVAELI----PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK 333 (406)
T ss_dssp TCHHHHHHG----GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred hcccccccc----ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence 112221111 146777732 1 11 23467788899997 9998864
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=95.24 E-value=0.02 Score=44.71 Aligned_cols=71 Identities=14% Similarity=0.130 Sum_probs=50.4
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CC---CcEEeCCCCCCchHHHHHHHHhCCCccE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG---VTEFLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g---~~~vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
..++++|+|+|+|+.+.+++..+...+. +++.+.|+.++.+.+.+ ++ ....+..+ ......+|+
T Consensus 15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-----------~~~~~~~di 82 (171)
T d1p77a1 15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMD-----------SIPLQTYDL 82 (171)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-----------GCCCSCCSE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhc-----------cccccccce
Confidence 4578999999999999999988877665 99999999988776644 32 11122111 011237899
Q ss_pred EEeccCC
Q 017052 267 SFECIGD 273 (378)
Q Consensus 267 vid~~g~ 273 (378)
+++|+..
T Consensus 83 iIN~tp~ 89 (171)
T d1p77a1 83 VINATSA 89 (171)
T ss_dssp EEECCCC
T ss_pred eeecccc
Confidence 9999875
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.14 E-value=0.17 Score=37.47 Aligned_cols=28 Identities=21% Similarity=0.369 Sum_probs=21.7
Q ss_pred eEEEEcc-ChHHHHHHHHHHHc-CCCeEEEE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKAR-GASRIIGV 224 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~-g~~~vi~v 224 (378)
+|.|.|+ |-+|+.+++.+... +. ++++.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~ 30 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAE 30 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTS-EEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCC-EEEEE
Confidence 5889998 99999999887654 56 55554
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.14 E-value=0.02 Score=48.87 Aligned_cols=98 Identities=15% Similarity=0.159 Sum_probs=66.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC--------c-EEeCCCCCCchHHHHHHHHhCC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------T-EFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~--------~-~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
..-++|||+|.|. |..+-.++++....++..++.+++-.+.++++-. + ..+.. .+-.+.+++...+
T Consensus 79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~----~Da~~~l~~~~~~ 153 (290)
T d1xj5a_ 79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKNAAEG 153 (290)
T ss_dssp SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHTSCTT
T ss_pred CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE----ccHHHHHhhcccc
Confidence 4557999998643 4455577787777689999999999998887531 1 11111 1334455554444
Q ss_pred CccEEE-eccCC---------hHHHHHHHHHhccCCccEEEec
Q 017052 263 GADYSF-ECIGD---------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 263 ~~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+|+|| |+... .+.++.+.++|+++ |.++.-.
T Consensus 154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~ 195 (290)
T d1xj5a_ 154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA 195 (290)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEec
Confidence 899766 65532 24678888999997 9888754
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.04 E-value=0.01 Score=43.56 Aligned_cols=38 Identities=32% Similarity=0.552 Sum_probs=33.6
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
++++++++|+|+|.+|.-++..++..|. +|+.+.+++.
T Consensus 27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~ 64 (121)
T d1d7ya2 27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR 64 (121)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence 5678999999999999999999999999 8988877653
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=95.03 E-value=0.46 Score=35.50 Aligned_cols=78 Identities=15% Similarity=0.086 Sum_probs=55.2
Q ss_pred CeEEEEc-cChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC--CccEEEecc
Q 017052 195 STVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFECI 271 (378)
Q Consensus 195 ~~VLI~G-ag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~--~~d~vid~~ 271 (378)
++|.|+| .|.+|..++..++..|. .|.+.++++.........+++.++.... .....+.+.+..+. .=.+++|+.
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~v~~~~~~~~~~~~iiiD~~ 87 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP-INLTLETIERLKPYLTENMLLADLT 87 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC-GGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc-hhhheeeeecccccccCCceEEEec
Confidence 6899999 59999999999999999 8999999887766665566776654432 33444444444433 225788887
Q ss_pred CCh
Q 017052 272 GDT 274 (378)
Q Consensus 272 g~~ 274 (378)
+..
T Consensus 88 Svk 90 (152)
T d2pv7a2 88 SVK 90 (152)
T ss_dssp SCC
T ss_pred ccC
Confidence 653
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.02 E-value=0.036 Score=42.27 Aligned_cols=85 Identities=15% Similarity=0.240 Sum_probs=61.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+|.++|+|.+|.+++.-....|. ++++.++++++.+.+ +++|..... +..+.+. ..|+||=|+. +
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~-------~~~~~~~-----~~dvIilavk-p 67 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM-------SHQDLID-----QVDLVILGIK-P 67 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS-------SHHHHHH-----TCSEEEECSC-G
T ss_pred EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec-------hhhhhhh-----ccceeeeecc-h
Confidence 57889999999998887767787 899999998887766 556754321 2223332 5799999986 4
Q ss_pred HHHHHHHHHhccCCccEEEec
Q 017052 275 GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 275 ~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.+.++.+.++ ..++.+.
T Consensus 68 ~~~~~vl~~l~~~-~~iis~~ 87 (152)
T d2ahra2 68 QLFETVLKPLHFK-QPIISMA 87 (152)
T ss_dssp GGHHHHHTTSCCC-SCEEECC
T ss_pred HhHHHHhhhcccc-eeEeccc
Confidence 6778888888875 6666553
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.96 E-value=0.0048 Score=47.92 Aligned_cols=88 Identities=9% Similarity=0.092 Sum_probs=55.4
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-----EeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-----FLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-----vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+|+|+|+|.+|.+++..+...|. .|..+++++++.+..+..+... .+.. +..+.+ +.+|++|-+
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~D~iii~ 70 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTA-----NDPDFL-----ATSDLLLVT 70 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEE-----SCHHHH-----HTCSEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCcccccccccc-----chhhhh-----cccceEEEe
Confidence 68999999999999998888999 9999999877554433322211 1111 111112 168999999
Q ss_pred cCChHH---HHHHHHHhccCCccEEEec
Q 017052 271 IGDTGM---ITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 271 ~g~~~~---~~~~~~~l~~~~G~~v~~g 295 (378)
+..... ++.+...+.++ ..++.+.
T Consensus 71 vka~~~~~~~~~l~~~~~~~-~~Iv~~q 97 (167)
T d1ks9a2 71 LKAWQVSDAVKSLASTLPVT-TPILLIH 97 (167)
T ss_dssp SCGGGHHHHHHHHHTTSCTT-SCEEEEC
T ss_pred ecccchHHHHHhhccccCcc-cEEeecc
Confidence 987432 22333344554 5566653
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.86 E-value=0.012 Score=48.39 Aligned_cols=106 Identities=12% Similarity=-0.010 Sum_probs=66.0
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE-E------------eCCCCCCch-H
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-F------------LNPNDNNEP-V 252 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~-v------------i~~~~~~~~-~ 252 (378)
+.....++.+||..|+|. |..+..||+ .|+ +|++++.++...+.+++..... . ........+ +
T Consensus 39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 115 (229)
T d2bzga1 39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY 115 (229)
T ss_dssp HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence 345678999999999875 777888876 588 9999999999988776532211 0 000000000 0
Q ss_pred HHHHHHH---hCCCccEEEeccCC--------hHHHHHHHHHhccCCccEEEecc
Q 017052 253 QQVIKRI---TDGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 253 ~~~i~~~---~~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
...+..+ ..+.+|+|+++..- ...+..+.++|+++ |+++....
T Consensus 116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~ 169 (229)
T d2bzga1 116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL 169 (229)
T ss_dssp ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence 0001111 12368999986531 24567788999997 98776643
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.83 E-value=0.082 Score=39.99 Aligned_cols=96 Identities=19% Similarity=0.265 Sum_probs=63.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEcCChhh---HHHHHhCCCcEEeCCCCCCchHH---------------
Q 017052 195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEK---CEKAKAFGVTEFLNPNDNNEPVQ--------------- 253 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~~~~~~---~~~l~~~g~~~vi~~~~~~~~~~--------------- 253 (378)
++|.|.|+ |.+|..++++.+.. .. +|+++..+..- .+.++++.+..+...++ ....
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~--~~~~~l~~~~~~~~~~v~~ 79 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP--SLYNDLKEALAGSSVEAAA 79 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG--GGHHHHHHHTTTCSSEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH--HHHHHHHHHhhhccccccc
Confidence 78999999 99999999999876 35 67777555432 34556688888765431 1111
Q ss_pred --HHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 254 --QVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 254 --~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.+.++....+|+++.++.|...+...+.++.. |+-+.+.
T Consensus 80 g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~--gk~iaLA 121 (150)
T d1r0ka2 80 GADALVEAAMMGADWTMAAIIGCAGLKATLAAIRK--GKTVALA 121 (150)
T ss_dssp SHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHT--TSEEEEC
T ss_pred CccchheecccccceeeeecCchhHHHHHHHHHhc--CCEEEEe
Confidence 112222223678888887776778888888886 4444543
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.80 E-value=0.034 Score=42.26 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=30.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
-.|++|||+|+|.+|..-+..+...|+ +|+++..
T Consensus 11 l~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP 44 (150)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred eCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 378999999999999999999999999 8888843
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=94.80 E-value=0.0077 Score=52.89 Aligned_cols=75 Identities=13% Similarity=0.140 Sum_probs=48.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhC----CCcEE-eCCCCCCchHHHHHHHHhCC-Cc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAF----GVTEF-LNPNDNNEPVQQVIKRITDG-GA 264 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~-~l~~~----g~~~v-i~~~~~~~~~~~~i~~~~~~-~~ 264 (378)
++++|||+|+ |-+|..+++.+...|. +|++++++..+.. +++.. +...+ .|.. +.+ .+.+.... .+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~--d~~---~l~~~~~~~~~ 80 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIR--DQN---KLLESIREFQP 80 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTT--CHH---HHHHHHHHHCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeecc--ChH---hhhhhhhhchh
Confidence 5799999998 9999999999999999 8999988765432 22222 22222 1332 222 22222223 67
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+|+.+++.
T Consensus 81 ~~v~~~aa~ 89 (356)
T d1rkxa_ 81 EIVFHMAAQ 89 (356)
T ss_dssp SEEEECCSC
T ss_pred hhhhhhhcc
Confidence 899988764
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.75 E-value=0.061 Score=43.35 Aligned_cols=102 Identities=15% Similarity=0.044 Sum_probs=63.8
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
....++||++||=+|+|. |..+..+|+..+..+|++++.+++..+.+++ .+....+..+....... .....
T Consensus 50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~----~~~~~ 124 (209)
T d1nt2a_ 50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKY----SGIVE 124 (209)
T ss_dssp CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGT----TTTCC
T ss_pred ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCcccc----ccccc
Confidence 346799999999999853 5567777777765589999999988776644 34333332221111110 00111
Q ss_pred CccEEEeccCC----hHHHHHHHHHhccCCccEEEe
Q 017052 263 GADYSFECIGD----TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 ~~d~vid~~g~----~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+|+++..+.- ...+..+.+.|+++ |+++..
T Consensus 125 ~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 159 (209)
T d1nt2a_ 125 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM 159 (209)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred eEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEE
Confidence 56777654322 13466778899997 998765
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=94.64 E-value=0.18 Score=39.25 Aligned_cols=94 Identities=18% Similarity=0.172 Sum_probs=57.3
Q ss_pred eEEEEccChHHHHHHHHHHHc-CCCeEEEEcCC--hhhHHHHHhCCCcEEeCCCC----------CCchHHHHHHHHhCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTN--PEKCEKAKAFGVTEFLNPND----------NNEPVQQVIKRITDG 262 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~--~~~~~~l~~~g~~~vi~~~~----------~~~~~~~~i~~~~~~ 262 (378)
+|.|+|.|-+|+.+++.+... .. +++++... ......+...+.......+. ....+.+...
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~----- 76 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK----- 76 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH-----
T ss_pred EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhh-----
Confidence 688999999999999999866 45 77777432 23334444444333221110 0111221111
Q ss_pred CccEEEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 263 GADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 263 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
++|+|+||+|.....+.+-.++..+ -+++..+.
T Consensus 77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~ 109 (178)
T d1b7go1 77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGG 109 (178)
T ss_dssp HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTT
T ss_pred cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECC
Confidence 5899999999866666677777764 57776544
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.62 E-value=0.015 Score=46.19 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=32.0
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.+++|+|+|+|+.|+.++..++..|++.|+.+++++.
T Consensus 3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 3689999999999999999999999855888877654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.61 E-value=0.066 Score=44.11 Aligned_cols=96 Identities=20% Similarity=0.262 Sum_probs=64.7
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCc-EEeCCCCCCchHHHHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVT-EFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~-~vi~~~~~~~~~~~~i~~~ 259 (378)
++......++++||=+|+|. |..+..+++ .|+ .|++++.+++-.+.+++. +.. .++..+ . ..+
T Consensus 33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d--~-------~~l 100 (251)
T d1wzna1 33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD--V-------LEI 100 (251)
T ss_dssp HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC--G-------GGC
T ss_pred HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh--h-------hhc
Confidence 44566777888999999875 777777776 578 899999999888877652 322 223221 1 112
Q ss_pred hC-CCccEEEeccCC------h---HHHHHHHHHhccCCccEEE
Q 017052 260 TD-GGADYSFECIGD------T---GMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 260 ~~-~~~d~vid~~g~------~---~~~~~~~~~l~~~~G~~v~ 293 (378)
.. +.||+|+-..+. + ..+..+.++|+++ |+++.
T Consensus 101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii 143 (251)
T d1wzna1 101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT 143 (251)
T ss_dssp CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence 22 379988854322 1 3577788899997 98875
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=94.61 E-value=0.057 Score=44.98 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=29.4
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
+.||+|+ +++|.+.+..+...|+ +|+.++++.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~ 37 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG 37 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence 4588888 8999999999999999 89999887554
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=94.58 E-value=0.052 Score=44.37 Aligned_cols=102 Identities=20% Similarity=0.266 Sum_probs=67.2
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHH---
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI--- 259 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~--- 259 (378)
.+....++||-+|.+ +|..++.+|+.+ +. +++.++.+++..+.+++ .|....+... ..+..+.+.++
T Consensus 55 ~~~~~~k~iLEiGT~-~GyStl~la~al~~~g-~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~--~g~a~~~L~~l~~~ 130 (227)
T d1susa1 55 LKLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKD 130 (227)
T ss_dssp HHHHTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHC
T ss_pred HHhcCCCcEEEecch-hhhhHHHHHhhCCCCc-EEEEEeccchhHHHHHHHHHHhccccceeee--ehHHHHHHHHHHhc
Confidence 344566899999874 478888888876 34 99999999988877655 5654422221 22333444443
Q ss_pred --hCCCccEEE-eccCC--hHHHHHHHHHhccCCccEEEec
Q 017052 260 --TDGGADYSF-ECIGD--TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 260 --~~~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..+.||+|| |+--. ...++.++.+++++ |.++.=.
T Consensus 131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DN 170 (227)
T d1susa1 131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN 170 (227)
T ss_dssp GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEET
T ss_pred cccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEcc
Confidence 234799888 54332 35678899999997 8877653
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=94.53 E-value=0.16 Score=38.35 Aligned_cols=97 Identities=14% Similarity=0.196 Sum_probs=63.6
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHc--CCCeEEEEcCChhh---HHHHHhCCCcEEeCCCCCCchH---H------------
Q 017052 195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEK---CEKAKAFGVTEFLNPNDNNEPV---Q------------ 253 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~--g~~~vi~v~~~~~~---~~~l~~~g~~~vi~~~~~~~~~---~------------ 253 (378)
++|.|.|+ |.+|..++.+.+.. .. +|+++..+..- .+.+++|.+..++..+ +... .
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d--~~~~~~l~~~l~~~~~~~~~ 78 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDD--EASAKLLKTMLQQQGSRTEV 78 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESS--HHHHHHHHHHHHHTTCCCEE
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhccccccc--HHHHHHHHHHhhhhcccccc
Confidence 47899999 99999999999886 34 67666554433 2344568887776553 1111 1
Q ss_pred ----HHHHHHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEecc
Q 017052 254 ----QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 254 ----~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+.+.++... .+|+|+..+.|...+.-.+..+.. |+-+.+..
T Consensus 79 ~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~--gk~iaLAN 124 (151)
T d1q0qa2 79 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRA--GKTILLAN 124 (151)
T ss_dssp EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHT--TCEEEECC
T ss_pred ccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhc--CCeEEEEc
Confidence 122222223 689999888887888888888886 55555533
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.47 E-value=0.044 Score=39.79 Aligned_cols=41 Identities=24% Similarity=0.236 Sum_probs=35.7
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+.....++++|+|+|+|.+|+-+++.++..|. ++..+.+.+
T Consensus 15 ~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~ 55 (121)
T d1mo9a2 15 EELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE 55 (121)
T ss_dssp HHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred HHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence 45567789999999999999999999999999 888887764
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=94.45 E-value=0.24 Score=38.21 Aligned_cols=101 Identities=20% Similarity=0.212 Sum_probs=61.5
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhCCCcEEeCCCCCCchHHH-------HHHHHhCCCcc
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDT--NPEKCEKAKAFGVTEFLNPNDNNEPVQQ-------VIKRITDGGAD 265 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~--~~~~~~~l~~~g~~~vi~~~~~~~~~~~-------~i~~~~~~~~d 265 (378)
.+|-|+|-|-+|+.+++++...+--+++++.. .......+..++.+......+....+.+ .+.++. .++|
T Consensus 2 ~~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vD 80 (171)
T d1cf2o1 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEAD 80 (171)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCS
T ss_pred eEEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCC
Confidence 37889999999999999886654226666633 2334455566676655433210000100 011111 1689
Q ss_pred EEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 266 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+|+||+|.-...+.+-..+..+ -+++..+..
T Consensus 81 vViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~ 111 (171)
T d1cf2o1 81 IVIDCTPEGIGAKNLKMYKEKG-IKAIFQGGE 111 (171)
T ss_dssp EEEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred EEEEccCCCCCHHHHHHHHHcC-CCEEEECCC
Confidence 9999999865666677778875 777776543
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.45 E-value=0.044 Score=45.87 Aligned_cols=93 Identities=19% Similarity=0.132 Sum_probs=59.7
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc---EEeCCCCCCchHHHHHHHHhCC
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~---~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.+++|++||-.|+| +|..++.+|+..++ +|++++.+++..+.+++ .|.. .+++.+ ..+ +...
T Consensus 104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D--~~~-------~~~~ 172 (260)
T d2frna1 104 VAKPDELVVDMFAG-IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD--NRD-------FPGE 172 (260)
T ss_dssp HCCTTCEEEETTCT-TTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC--TTT-------CCCC
T ss_pred hcCCccEEEECcce-EcHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcc--hHH-------hccC
Confidence 36899999998764 24445566665445 99999999998887764 3432 233332 111 1223
Q ss_pred -CccEEE-ecc-CChHHHHHHHHHhccCCccEEEe
Q 017052 263 -GADYSF-ECI-GDTGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 -~~d~vi-d~~-g~~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+|.|+ +.. .+...+..++..++++ |.+..+
T Consensus 173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~ 206 (260)
T d2frna1 173 NIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYH 206 (260)
T ss_dssp SCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEE
T ss_pred CCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEE
Confidence 688655 432 3446778899999986 877554
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.42 E-value=0.038 Score=47.91 Aligned_cols=103 Identities=23% Similarity=0.240 Sum_probs=62.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHHh-CC-C
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT-DG-G 263 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~~-~~-~ 263 (378)
.+++|++||=.++|. |..++.+|+ .|+.+|++++.+++..+.+++ .|....+... ..+..+.+..+. .+ .
T Consensus 142 ~~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~--~~d~~~~~~~~~~~~~~ 217 (324)
T d2as0a2 142 WVQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFI--VGSAFEEMEKLQKKGEK 217 (324)
T ss_dssp GCCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHTTCC
T ss_pred hcCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceee--echhhhhhHHHHhccCC
Confidence 367899998886532 333334444 477689999999998887755 4543211111 123333443332 23 8
Q ss_pred ccEEE-eccCC--------------hHHHHHHHHHhccCCccEEEeccC
Q 017052 264 ADYSF-ECIGD--------------TGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 264 ~d~vi-d~~g~--------------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
||+|+ |.-.. ...+..++++++++ |.++.+...
T Consensus 218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s 265 (324)
T d2as0a2 218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCS 265 (324)
T ss_dssp EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECC
T ss_pred CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCC
Confidence 99877 43211 12566778899997 999887543
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.42 E-value=0.078 Score=42.01 Aligned_cols=89 Identities=17% Similarity=0.269 Sum_probs=57.2
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..++++++..|. ++++.++...........+... ..++.+.+. ..|+|..+..
T Consensus 46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~-------~~~l~~ll~-----~sD~v~l~~p 112 (191)
T d1gdha1 46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF-------HDSLDSLLS-----VSQFFSLNAP 112 (191)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE-------CSSHHHHHH-----HCSEEEECCC
T ss_pred cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc-------cCCHHHHHh-----hCCeEEecCC
Confidence 47999999999999999999999999 8999987655433333322211 123433343 2577765543
Q ss_pred Ch-H----HHHHHHHHhccCCccEEEec
Q 017052 273 DT-G----MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~-~----~~~~~~~~l~~~~G~~v~~g 295 (378)
-+ + .-...++.|+++ ..+|.++
T Consensus 113 lt~~T~~li~~~~l~~mk~~-a~lIN~s 139 (191)
T d1gdha1 113 STPETRYFFNKATIKSLPQG-AIVVNTA 139 (191)
T ss_dssp CCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred CCchHhheecHHHhhCcCCc-cEEEecC
Confidence 21 1 123566777775 7776664
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.39 E-value=0.051 Score=44.41 Aligned_cols=102 Identities=16% Similarity=0.204 Sum_probs=65.3
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHhC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
+...+++|++||=+|+|. |..+..+|+..|- .+|++++.+++..+.+++. +....+..+..... ... ...
T Consensus 67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~---~~~-~~~ 141 (227)
T d1g8aa_ 67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE---EYR-ALV 141 (227)
T ss_dssp CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG---GGT-TTC
T ss_pred cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc---ccc-ccc
Confidence 556799999999999853 7778888888753 3899999999987777552 32222222211111 111 111
Q ss_pred CCccEEEeccCC----hHHHHHHHHHhccCCccEEEe
Q 017052 262 GGADYSFECIGD----TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 262 ~~~d~vid~~g~----~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+|+++..+.- ...+..+...|+++ |+++.+
T Consensus 142 ~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~ 177 (227)
T d1g8aa_ 142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA 177 (227)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence 267888744332 13567778899997 988765
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.36 E-value=0.046 Score=42.77 Aligned_cols=49 Identities=24% Similarity=0.228 Sum_probs=37.2
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
|.+...--+|++|||+|+|+++++++..+...| +++.+.|+.++.+.+.
T Consensus 9 l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l~ 57 (177)
T d1nvta1 9 LEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEALA 57 (177)
T ss_dssp HHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHHH
T ss_pred HHHhCCCcCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHHH
Confidence 434333458899999999999998887664443 8999999999877653
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.34 E-value=0.021 Score=50.90 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=28.0
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
|++|||+|+ |-+|..+++.+...|. +|++++
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence 689999998 9999999999999998 899986
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=94.11 E-value=0.044 Score=48.04 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=28.4
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+.|||+|+ |-+|..++..+...|. +|+++++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~ 35 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA 35 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence 67899998 9999999999999998 999998854
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.07 E-value=0.05 Score=43.24 Aligned_cols=40 Identities=33% Similarity=0.446 Sum_probs=35.4
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
++|.|+|+|.+|...++++...|. +|+..+++++.++.++
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a~ 44 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSK 44 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHHH
Confidence 589999999999999999999999 9999999998766443
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=94.00 E-value=0.34 Score=37.37 Aligned_cols=44 Identities=14% Similarity=0.254 Sum_probs=38.2
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
.+|-|+|.|.+|..++.-+...|. .|++.++++++.+.+.+.++
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~ 46 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA 46 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence 578899999999999988888999 89999999999988766543
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.94 E-value=0.095 Score=41.19 Aligned_cols=89 Identities=26% Similarity=0.302 Sum_probs=59.0
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|+++.|+|.|.+|+.++++++..|. +|++.++...+.... ..+... .++.+.+. ..|+|.-+.
T Consensus 42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~~-~~~~~~--------~~l~ell~-----~sDiv~~~~ 106 (184)
T d1ygya1 42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARAA-QLGIEL--------LSLDDLLA-----RADFISVHL 106 (184)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHHH-HHTCEE--------CCHHHHHH-----HCSEEEECC
T ss_pred ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHHh-hcCcee--------ccHHHHHh-----hCCEEEEcC
Confidence 357899999999999999999999999 999998765544333 233311 13333343 358877665
Q ss_pred CChH-----HHHHHHHHhccCCccEEEecc
Q 017052 272 GDTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 272 g~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..++ .-...+..|+++ ..+|.++-
T Consensus 107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sR 135 (184)
T d1ygya1 107 PKTPETAGLIDKEALAKTKPG-VIIVNAAR 135 (184)
T ss_dssp CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred CCCchhhhhhhHHHHhhhCCC-ceEEEecc
Confidence 4321 123566777775 77777644
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=93.93 E-value=0.095 Score=41.55 Aligned_cols=90 Identities=24% Similarity=0.295 Sum_probs=57.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-.|++|.|+|.|.+|..++++++..|+ +|++.++...... ....+... ..++.+.++. .|+|.-+.
T Consensus 47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~-~~~~~~~~-------~~~l~~ll~~-----sD~i~~~~ 112 (193)
T d1mx3a1 47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDGV-ERALGLQR-------VSTLQDLLFH-----SDCVTLHC 112 (193)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTTH-HHHHTCEE-------CSSHHHHHHH-----CSEEEECC
T ss_pred eeCceEEEeccccccccceeeeecccc-ceeeccCcccccc-hhhhcccc-------ccchhhcccc-----CCEEEEee
Confidence 368899999999999999999999999 8999977544322 22233321 1234333432 57776554
Q ss_pred CChH-----HHHHHHHHhccCCccEEEecc
Q 017052 272 GDTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 272 g~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
..+. .-...++.|+++ ..+|.++-
T Consensus 113 plt~~T~~li~~~~l~~mk~~-a~lIN~sR 141 (193)
T d1mx3a1 113 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR 141 (193)
T ss_dssp CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred cccccchhhhhHHHHhccCCC-CeEEecCC
Confidence 4211 123456677775 67766643
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.83 E-value=0.059 Score=39.34 Aligned_cols=70 Identities=16% Similarity=0.231 Sum_probs=47.6
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-Ccc
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GAD 265 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d 265 (378)
.......+++|+|+|+|.+|+-+++.+..+|. +|+.+.+.+.- ++. .- +....+.+.+.... +++
T Consensus 23 ~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~~~------l~~-----~~--d~~~~~~~~~~l~~~gv~ 88 (123)
T d1nhpa2 23 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILDRP------LGV-----YL--DKEFTDVLTEEMEANNIT 88 (123)
T ss_dssp HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSST------TTT-----TC--CHHHHHHHHHHHHTTTEE
T ss_pred HHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecCcc------ccc-----cc--chhhHHHHHHHhhcCCeE
Confidence 44445678899999999999999999999999 89888775421 110 00 34455555554333 677
Q ss_pred EEEec
Q 017052 266 YSFEC 270 (378)
Q Consensus 266 ~vid~ 270 (378)
+.+++
T Consensus 89 ~~~~~ 93 (123)
T d1nhpa2 89 IATGE 93 (123)
T ss_dssp EEESC
T ss_pred EEeCc
Confidence 77654
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=93.80 E-value=0.21 Score=34.52 Aligned_cols=71 Identities=18% Similarity=0.256 Sum_probs=50.4
Q ss_pred CCCCCeEEEEccChHHHHH-HHHHHHcCCCeEEEEcCC-hhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 191 ISKGSTVVIFGLGTVGLSV-AQGAKARGASRIIGVDTN-PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~a-iqla~~~g~~~vi~v~~~-~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
....+++.++|-|++|+.+ +++++..|. .|.+.+.. ....+.+++.|......++ .... .+.|+|+
T Consensus 5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~--~~~i---------~~~d~vV 72 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHA--EEHI---------EGASVVV 72 (96)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCC--GGGG---------TTCSEEE
T ss_pred chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCc--cccC---------CCCCEEE
Confidence 4567899999998889777 799999999 99999875 3445566678987665553 2111 1578877
Q ss_pred eccCC
Q 017052 269 ECIGD 273 (378)
Q Consensus 269 d~~g~ 273 (378)
-+.+-
T Consensus 73 ~S~AI 77 (96)
T d1p3da1 73 VSSAI 77 (96)
T ss_dssp ECTTS
T ss_pred ECCCc
Confidence 65553
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=93.80 E-value=0.13 Score=37.79 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=23.4
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGV 224 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v 224 (378)
+|.|+|+ |-+|+++.++++..+. ++++.
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~~ 30 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVLK 30 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCC-eEEEE
Confidence 5889998 9999999999999888 55443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.79 E-value=0.012 Score=48.40 Aligned_cols=75 Identities=17% Similarity=0.293 Sum_probs=46.1
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhCCCcEE-eCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
.+++|||+|+ |.+|..+++.+...|. .+|+++.+++.+......-..... .|.. +. +.+.... .++|+++.
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~----~~-~~~~~~~-~~~d~vi~ 86 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE----KL-DDYASAF-QGHDVGFC 86 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGG----GG-GGGGGGG-SSCSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccc----cc-ccccccc-cccccccc
Confidence 4578999998 9999999988877774 479999886644322111112222 2222 11 1222221 26899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
++|.
T Consensus 87 ~~~~ 90 (232)
T d2bkaa1 87 CLGT 90 (232)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9875
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=93.79 E-value=0.086 Score=41.63 Aligned_cols=89 Identities=13% Similarity=0.050 Sum_probs=57.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.+.+|.|+|.|.+|..+++.++..|. +|++.++........+..+.... .++.+.++ ..|+|.-+..
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~l~~~l~-----~sD~v~~~~p 109 (188)
T d2naca1 43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATREDMYP-----VCDVVTLNCP 109 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHGG-----GCSEEEECSC
T ss_pred cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc-------CCHHHHHH-----hccchhhccc
Confidence 58899999999999999999999999 89999886655555555443221 12222222 3577665443
Q ss_pred ChH-----HHHHHHHHhccCCccEEEec
Q 017052 273 DTG-----MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~~-----~~~~~~~~l~~~~G~~v~~g 295 (378)
.++ .-.+.+..|+++ ..+|.++
T Consensus 110 lt~~T~~li~~~~l~~mk~g-a~lIN~a 136 (188)
T d2naca1 110 LHPETEHMINDETLKLFKRG-AYIVNTA 136 (188)
T ss_dssp CCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred ccccchhhhHHHHHHhCCCC-CEEEecC
Confidence 211 123556677765 6666654
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.77 E-value=0.026 Score=47.73 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=30.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+++|+|+|+|..|++++..++..|. +|++++.++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 6899999999999999999999999 899998653
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=93.71 E-value=0.059 Score=46.70 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=44.5
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC----ChhhHHHHH---hCCCcEE-eCCCCCCchHHHHHHHHhCCCccE
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDT----NPEKCEKAK---AFGVTEF-LNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~----~~~~~~~l~---~~g~~~v-i~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
+|||+|+ |-+|..++..+...|. +|+++++ ........+ .-+...+ .|..+ ...+.+.++. .++|+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~~---~~~d~ 76 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN-EALMTEILHD---HAIDT 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTC-HHHHHHHHHH---TTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCC-HHHHHHHHhc---cCCCE
Confidence 6999998 9999999999999998 8998864 222222222 2233332 23321 2223333332 27899
Q ss_pred EEeccC
Q 017052 267 SFECIG 272 (378)
Q Consensus 267 vid~~g 272 (378)
||.+++
T Consensus 77 ViHlAa 82 (338)
T d1udca_ 77 VIHFAG 82 (338)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 999875
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=93.68 E-value=0.12 Score=43.54 Aligned_cols=35 Identities=23% Similarity=0.249 Sum_probs=29.8
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+-.+|||+|+ |.+|..++..+...|. +|+++.++.
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~ 37 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE 37 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence 3467999998 9999999999888998 898888754
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=93.67 E-value=0.046 Score=39.20 Aligned_cols=36 Identities=28% Similarity=0.512 Sum_probs=31.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
+.+|.|+|+|-+|+++++-|+.+|. ++++.+.+++.
T Consensus 11 ~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~ 46 (111)
T d1kjqa2 11 ATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA 46 (111)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence 3569999999999999999999999 89999877653
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=93.66 E-value=0.24 Score=33.67 Aligned_cols=67 Identities=16% Similarity=0.307 Sum_probs=47.7
Q ss_pred CeEEEEccChHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGLGTVGLSV-AQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Gag~vG~~a-iqla~~~g~~~vi~v~~~~-~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.+|-++|-|++|+.+ +++++..|+ .|.+.+..+ +..+.|+++|+.....++ ...+ .+.|+|+-+..
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~--~~~i---------~~~d~vV~SsA 69 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHS--ADNW---------YDPDLVIKTPA 69 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCC--TTSC---------CCCSEEEECTT
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeec--cccc---------CCCCEEEEecC
Confidence 367778888888855 688899999 999999876 456678999987655443 2211 25788876654
Q ss_pred C
Q 017052 273 D 273 (378)
Q Consensus 273 ~ 273 (378)
-
T Consensus 70 I 70 (89)
T d1j6ua1 70 V 70 (89)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.65 E-value=0.036 Score=45.94 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=31.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
..++|+|+|+|+.|++++..++..|. +|+++++++
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP 37 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 46889999999999999999999999 999998753
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.61 E-value=0.13 Score=44.51 Aligned_cols=73 Identities=12% Similarity=0.116 Sum_probs=44.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC----hhh---HHHHHhCCCcEEe-CCCCCCchHHHHHHHHhCC-Cc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN----PEK---CEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDG-GA 264 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~----~~~---~~~l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~-~~ 264 (378)
+.|||+|+ |-+|..++..+...|. +|+++++. .+. .+....-+...+. |.. +.. .+..+... ++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d~~---~l~~~~~~~~~ 75 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC--DRK---GLEKVFKEYKI 75 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTT--CHH---HHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEEeecC--CHH---HHHHHHhccCC
Confidence 57899998 9999999999988998 89888541 112 2222223333322 332 222 22222222 79
Q ss_pred cEEEeccCC
Q 017052 265 DYSFECIGD 273 (378)
Q Consensus 265 d~vid~~g~ 273 (378)
|+||.+.+.
T Consensus 76 d~VihlAa~ 84 (347)
T d1z45a2 76 DSVIHFAGL 84 (347)
T ss_dssp CEEEECCSC
T ss_pred CEEEEcccc
Confidence 999998763
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.61 E-value=0.19 Score=40.14 Aligned_cols=93 Identities=16% Similarity=0.157 Sum_probs=60.5
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-EeCCCCCCchHHHHHHHHhCCCcc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
++++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++ .+... .+..+ ..++ .+.++.+|
T Consensus 35 l~~~~~ILDiGcG~-G~~~~~la~~-~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d--~~~l-----~~~~~~fD 104 (226)
T d1ve3a1 35 MKKRGKVLDLACGV-GGFSFLLEDY-GF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGD--ARKL-----SFEDKTFD 104 (226)
T ss_dssp CCSCCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECC--TTSC-----CSCTTCEE
T ss_pred cCCCCEEEEECCCc-chhhhhHhhh-hc-ccccccccccchhhhhhhhccccccccccccc--cccc-----cccCcCce
Confidence 57889999999864 7777788764 77 89999999998877754 33222 22111 1111 01123789
Q ss_pred EEEeccC-----Ch---HHHHHHHHHhccCCccEEEe
Q 017052 266 YSFECIG-----DT---GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 266 ~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~ 294 (378)
+|+-... .. ..+..+.+.|+++ |+++..
T Consensus 105 ~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~ 140 (226)
T d1ve3a1 105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY 140 (226)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence 8874322 11 2577888999997 998754
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=93.60 E-value=0.039 Score=43.33 Aligned_cols=37 Identities=27% Similarity=0.458 Sum_probs=33.3
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
...+++|+|+|+|+.|+.++..+...|. +|+.++.++
T Consensus 40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence 4557899999999999999999999999 999998765
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.59 E-value=0.13 Score=42.02 Aligned_cols=100 Identities=14% Similarity=0.152 Sum_probs=62.7
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcEEeCCCCCCchHHHHHHHHhCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
+...+++|++||=+|+|. |..+..+|+......|++++.+++..+.+++. +....+..+..... .....
T Consensus 68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~------~~~~~ 140 (230)
T d1g8sa_ 68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ------EYANI 140 (230)
T ss_dssp CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG------GGTTT
T ss_pred HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc------ccccc
Confidence 556789999999999853 66777777765444899999999988877663 22222222211111 11112
Q ss_pred --CccEEEeccCC----hHHHHHHHHHhccCCccEEEe
Q 017052 263 --GADYSFECIGD----TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 263 --~~d~vid~~g~----~~~~~~~~~~l~~~~G~~v~~ 294 (378)
.+|+++..+-- ...+..+...|+++ |+++.+
T Consensus 141 ~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~ 177 (230)
T d1g8sa_ 141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA 177 (230)
T ss_dssp CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred cceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence 45566654432 23466777889997 988765
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.58 E-value=0.041 Score=40.18 Aligned_cols=61 Identities=13% Similarity=0.168 Sum_probs=41.9
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEec
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFEC 270 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~ 270 (378)
.++++|+|+|.+|+-+++.++.+|. +|+.+.++ + .+..+ +.++.+.+.+.... |+++..++
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~--~--~l~~~-----------D~~~~~~l~~~l~~~Gv~i~~~~ 81 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS--I--LLRGF-----------DQDMANKIGEHMEEHGIKFIRQF 81 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS--S--SSTTS-----------CHHHHHHHHHHHHHTTEEEEESC
T ss_pred CCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec--h--hhccC-----------CHHHHHHHHHHHHHCCCEEEECC
Confidence 4689999999999999999999999 77777654 1 22221 44555555543333 67776654
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.55 E-value=0.052 Score=45.37 Aligned_cols=32 Identities=22% Similarity=0.469 Sum_probs=28.7
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+|||+|+ |-+|..++..++..|. +|+++++++
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~ 35 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD 35 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence 6999998 9999999999999999 899997753
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.44 E-value=0.088 Score=45.33 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=29.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
+++||+|+ |-+|..++..+...|. +|+++++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence 68999998 9999999999999999 99999874
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.37 E-value=0.06 Score=38.92 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=33.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.++..++|+|+|+|.+|.-+++.++.+|. +|+.+.+.+
T Consensus 18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~ 55 (117)
T d1onfa2 18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN 55 (117)
T ss_dssp TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence 44556899999999999999999999999 899997764
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=93.32 E-value=0.032 Score=37.13 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=31.0
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
++|.|+|+|-+|+++++-|+.+|. ++++++.+++.
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence 578999999999999999999999 89999876543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=93.31 E-value=0.22 Score=40.90 Aligned_cols=36 Identities=31% Similarity=0.457 Sum_probs=31.6
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
...+|+|+|+|++|..++..+..+|..+++.++.+.
T Consensus 29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 64 (247)
T d1jw9b_ 29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 64 (247)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence 346999999999999999999999998999987643
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.30 E-value=0.027 Score=48.06 Aligned_cols=96 Identities=17% Similarity=0.092 Sum_probs=60.8
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC----CCcE------EeCCCCCCchHHHHHHH
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE------FLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~----g~~~------vi~~~~~~~~~~~~i~~ 258 (378)
.+.+++++||-+|+|. |..++.+|+. |+ +|++++.+++-++.+++. +... +.+. ++...-..
T Consensus 52 l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 123 (292)
T d1xvaa_ 52 LRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA-----NWLTLDKD 123 (292)
T ss_dssp HHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC-----CGGGHHHH
T ss_pred hhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeec-----cccccccc
Confidence 3445678999988863 7778888875 88 899999999987776542 2111 1111 11111122
Q ss_pred HhCC-CccEEEeccCC--------------hHHHHHHHHHhccCCccEEE
Q 017052 259 ITDG-GADYSFECIGD--------------TGMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 259 ~~~~-~~d~vid~~g~--------------~~~~~~~~~~l~~~~G~~v~ 293 (378)
.... .+|.|+..... ...+..+.+.|+++ |.++.
T Consensus 124 ~~~~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~ 172 (292)
T d1xvaa_ 124 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI 172 (292)
T ss_dssp SCCTTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred cCCCCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence 2233 78988743211 12678889999997 99876
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=93.30 E-value=0.08 Score=45.78 Aligned_cols=73 Identities=12% Similarity=0.191 Sum_probs=45.9
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEe--CCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi--~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+|||+|+ |-+|..+++.+...|..+|++++....+...+....--..+ |.. +..++.+.... ++|+|+.+.+
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~-~~~~~~~~~~~----~~d~Vih~a~ 76 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDIS-IHSEWIEYHVK----KCDVVLPLVA 76 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTT-TCSHHHHHHHH----HCSEEEECBC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccC-ChHHHHHHHHh----CCCccccccc
Confidence 6999998 99999999888777743899997765544433332111223 222 13344433322 5899999876
Q ss_pred C
Q 017052 273 D 273 (378)
Q Consensus 273 ~ 273 (378)
-
T Consensus 77 ~ 77 (342)
T d2blla1 77 I 77 (342)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=93.15 E-value=0.19 Score=39.61 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=59.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcEE--eCCCCCCchHHHHHHHHhCCCccE
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~v--i~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
++.+||-+|+| .|..+..+++ .|. +|++++.+++..+.+++ .+.+.+ ...+-.... ..+.||+
T Consensus 30 ~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~--------~~~~fD~ 98 (198)
T d2i6ga1 30 APGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT--------FDGEYDF 98 (198)
T ss_dssp CSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC--------CCCCEEE
T ss_pred CCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc--------ccccccE
Confidence 34489999987 6887877776 488 99999999988876653 444432 111100111 1237899
Q ss_pred EEeccC-----C---hHHHHHHHHHhccCCccEEEeccC
Q 017052 267 SFECIG-----D---TGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 267 vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
|+...- . ...+..+.++|+++ |+++.....
T Consensus 99 I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~~ 136 (198)
T d2i6ga1 99 ILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAAM 136 (198)
T ss_dssp EEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEEB
T ss_pred EEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 885321 1 13677788889997 998876443
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=93.08 E-value=0.05 Score=47.00 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=59.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE--EeCCCCCCchHHHHHHHHh-CC-
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRIT-DG- 262 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~--vi~~~~~~~~~~~~i~~~~-~~- 262 (378)
..+|++||=.++|. |..++.+|+ .+. +|++++.+++..+.+++ .|.+. ++.. +..+.++.+. .+
T Consensus 143 ~~~g~rVLDl~~gt-G~~s~~~a~-g~~-~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~-----d~~~~~~~~~~~~~ 214 (318)
T d1wxxa2 143 RFRGERALDVFSYA-GGFALHLAL-GFR-EVVAVDSSAEALRRAEENARLNGLGNVRVLEA-----NAFDLLRRLEKEGE 214 (318)
T ss_dssp GCCEEEEEEETCTT-THHHHHHHH-HEE-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEES-----CHHHHHHHHHHTTC
T ss_pred HhCCCeeeccCCCC-cHHHHHHHh-cCC-cEEeecchHHHHHHHHHHHHHcCCCCcceeec-----cHHHHhhhhHhhhc
Confidence 34789999886633 333345554 344 89999999998887764 45543 2322 2333333332 23
Q ss_pred CccEEE-ecc--C--C----------hHHHHHHHHHhccCCccEEEeccC
Q 017052 263 GADYSF-ECI--G--D----------TGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 263 ~~d~vi-d~~--g--~----------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.||+|+ |.- + . .+.+..++++++++ |.++.+...
T Consensus 215 ~fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs 263 (318)
T d1wxxa2 215 RFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCS 263 (318)
T ss_dssp CEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred CCCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence 899877 421 1 1 13456778889997 999887554
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=93.08 E-value=0.14 Score=42.86 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=30.6
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
-++|||+|+ |.+|..++..+...|. +|++++++..
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~ 38 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVREST 38 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCc
Confidence 468999998 9999999999999998 8999988643
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.00 E-value=0.26 Score=37.02 Aligned_cols=40 Identities=20% Similarity=0.341 Sum_probs=32.0
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
+|-|+|.|.+|..++.-+...|. .+++..+++++...++.
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~ 41 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIERA 41 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHHH
T ss_pred EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHhh
Confidence 57888999999999999999998 88888776655544443
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=92.98 E-value=0.11 Score=41.06 Aligned_cols=83 Identities=14% Similarity=0.190 Sum_probs=55.2
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEE----eCCCC---CCchHHHHHHHHhCCCccEE
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF----LNPND---NNEPVQQVIKRITDGGADYS 267 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~v----i~~~~---~~~~~~~~i~~~~~~~~d~v 267 (378)
.+|.|+|+|..|.+++.++...|. +|+..+++++..+.+.+-+.... +...+ -..++.+.+. +.|+|
T Consensus 8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~i 81 (189)
T d1n1ea2 8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEII 81 (189)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCE
T ss_pred ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEE
Confidence 479999999999999999988887 89999999998888765331100 00000 0123333332 57999
Q ss_pred EeccCChHHHHHHHHHh
Q 017052 268 FECIGDTGMITTALQSC 284 (378)
Q Consensus 268 id~~g~~~~~~~~~~~l 284 (378)
+-++.+ ..+...++.+
T Consensus 82 iiavPs-~~~~~~~~~~ 97 (189)
T d1n1ea2 82 LFVIPT-QFLRGFFEKS 97 (189)
T ss_dssp EECSCH-HHHHHHHHHH
T ss_pred EEcCcH-HHHHHHHHHH
Confidence 999876 4555555443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.92 E-value=0.31 Score=36.56 Aligned_cols=39 Identities=36% Similarity=0.532 Sum_probs=32.1
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhh
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEK 230 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~ 230 (378)
..+.+|.|+|+|.+|..++..+...+ +.+++.++.++++
T Consensus 4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~ 43 (148)
T d1ldna1 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK 43 (148)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence 35678999999999999888887766 3479999988876
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=92.82 E-value=0.062 Score=47.03 Aligned_cols=74 Identities=20% Similarity=0.277 Sum_probs=45.7
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
++.+|||+|+ |-+|..++..+...|. +|+++++.+..... ...........+ -.+...... .. .++|.|+.+.
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~-~~~~~~~~~~~D--~~~~~~~~~-~~-~~~d~Vih~a 87 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMT-EDMFCDEFHLVD--LRVMENCLK-VT-EGVDHVFNLA 87 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSC-GGGTCSEEEECC--TTSHHHHHH-HH-TTCSEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchh-hhcccCcEEEee--chhHHHHHH-Hh-hcCCeEeecc
Confidence 5778999988 9999999999999998 89988764332211 112222222222 122222222 22 2689999877
Q ss_pred C
Q 017052 272 G 272 (378)
Q Consensus 272 g 272 (378)
+
T Consensus 88 ~ 88 (363)
T d2c5aa1 88 A 88 (363)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.78 E-value=0.011 Score=51.40 Aligned_cols=94 Identities=21% Similarity=0.270 Sum_probs=53.3
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHH---HHhCCCcE---EeCCCCCCchHHHHHHHHhCC
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK---AKAFGVTE---FLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~---l~~~g~~~---vi~~~~~~~~~~~~i~~~~~~ 262 (378)
..+.+|++||-+|+|. |..++.+|+ .|+++|++++.++..... .+..+... ++..+ ..++ ....+
T Consensus 29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~--~~~~-----~~~~~ 99 (316)
T d1oria_ 29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGK--VEEV-----ELPVE 99 (316)
T ss_dssp HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESC--TTTC-----CCSSS
T ss_pred cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEecc--HHHc-----ccccc
Confidence 3456899999999864 666665555 687789999988643222 22233321 22221 1111 01123
Q ss_pred CccEEEe-ccCC--------hHHHHHHHHHhccCCccEE
Q 017052 263 GADYSFE-CIGD--------TGMITTALQSCCDGWGLAV 292 (378)
Q Consensus 263 ~~d~vid-~~g~--------~~~~~~~~~~l~~~~G~~v 292 (378)
.+|+|+. ..+. ...+...-+.|+++ |+++
T Consensus 100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii 137 (316)
T d1oria_ 100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF 137 (316)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence 7898864 2221 13444556789997 8875
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.75 E-value=0.085 Score=42.75 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=64.7
Q ss_pred hcCCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcEEeCCCCCCchHHHHHHHH--
Q 017052 188 VADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI-- 259 (378)
Q Consensus 188 ~~~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~vi~~~~~~~~~~~~i~~~-- 259 (378)
..+....++||-+|.+ .|..++.+|+.+ +. +++.++.+++..+.+++ .|....+... ..+..+.+.++
T Consensus 54 L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~--~Gda~e~l~~~~~ 129 (219)
T d2avda1 54 LARLIQAKKALDLGTF-TGYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLR--LKPALETLDELLA 129 (219)
T ss_dssp HHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHH
T ss_pred HHHccCCCeEEEEech-hhHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEE--Eeehhhcchhhhh
Confidence 4455667899999874 477788888876 44 99999999998776654 4543322211 12233333322
Q ss_pred --hCCCccEEEeccCC---hHHHHHHHHHhccCCccEEEe
Q 017052 260 --TDGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 --~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
..+.||+||--... ...++.+++.|+++ |.++.-
T Consensus 130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~D 168 (219)
T d2avda1 130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVL 168 (219)
T ss_dssp TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEe
Confidence 23379988833322 24577899999996 777654
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=92.67 E-value=0.089 Score=44.23 Aligned_cols=97 Identities=15% Similarity=0.138 Sum_probs=64.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC-----C---cE--EeCCCCCCchHHHHHHHHh
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-----V---TE--FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g-----~---~~--vi~~~~~~~~~~~~i~~~~ 260 (378)
....++|||+|+|. |..+-.++++.+..+|.+++.+++-.+.++++- + ++ ++.. +..+.+++ +
T Consensus 73 ~~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~-----D~~~~l~~-~ 145 (274)
T d1iy9a_ 73 HPNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD-----DGFMHIAK-S 145 (274)
T ss_dssp SSSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES-----CSHHHHHT-C
T ss_pred cCCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEec-----hHHHHHhh-c
Confidence 34568999998754 555667778777779999999999988887742 1 11 2211 22333443 2
Q ss_pred CCCccEEE-eccC---------ChHHHHHHHHHhccCCccEEEec
Q 017052 261 DGGADYSF-ECIG---------DTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
...+|+|+ |... +.+..+.+.++|+++ |.++.-.
T Consensus 146 ~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~ 189 (274)
T d1iy9a_ 146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT 189 (274)
T ss_dssp CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence 34899876 5433 225578888999997 9888654
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.60 E-value=0.078 Score=38.18 Aligned_cols=35 Identities=17% Similarity=0.369 Sum_probs=31.0
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.++++|+|+|.+|+-+++.+..+|. +|+.+.+.++
T Consensus 22 p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE 56 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence 4789999999999999999999999 8988877653
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=92.60 E-value=0.048 Score=44.68 Aligned_cols=36 Identities=28% Similarity=0.387 Sum_probs=31.6
Q ss_pred CCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
.+++||+|+ +++|.+.++.+...|+ +|+.+++++++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~ 37 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG 37 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence 367899988 9999999999999999 89999887654
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=92.58 E-value=0.18 Score=43.28 Aligned_cols=99 Identities=16% Similarity=0.140 Sum_probs=61.8
Q ss_pred cCCCCCCeEEEEcc--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh------CCCcE--EeCCCCCCchHHHHHHH
Q 017052 189 ADISKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA------FGVTE--FLNPNDNNEPVQQVIKR 258 (378)
Q Consensus 189 ~~~~~g~~VLI~Ga--g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~------~g~~~--vi~~~~~~~~~~~~i~~ 258 (378)
..+.+|++||=..+ |+.++. |...|+..|++++.++...+++++ ++.+. ++.. +..+.++.
T Consensus 140 ~~~~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~-----d~~~~l~~ 210 (317)
T d2b78a2 140 NGSAAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM-----DVFDYFKY 210 (317)
T ss_dssp HTTTBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES-----CHHHHHHH
T ss_pred HHhhCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc-----cHHHHHHH
Confidence 45778999998844 555543 234687789999999988887764 22222 3322 33344443
Q ss_pred Hh-CC-CccEEE-ecc--CC------------hHHHHHHHHHhccCCccEEEeccC
Q 017052 259 IT-DG-GADYSF-ECI--GD------------TGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 259 ~~-~~-~~d~vi-d~~--g~------------~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+. .+ .||+|| |.- +. .+++..++++++++ |.++.+...
T Consensus 211 ~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs 265 (317)
T d2b78a2 211 ARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNA 265 (317)
T ss_dssp HHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred HHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCC
Confidence 32 23 799877 522 10 13566788899997 998876543
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.57 E-value=0.089 Score=41.15 Aligned_cols=39 Identities=26% Similarity=0.361 Sum_probs=33.6
Q ss_pred eEEEE-ccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 017052 196 TVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 196 ~VLI~-Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~ 235 (378)
+|.|+ |+|.+|.++++.+...|+ +|+...|++++.+.+.
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~ 41 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKA 41 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence 57888 569999999999999999 8999999998876553
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.56 E-value=0.056 Score=45.07 Aligned_cols=42 Identities=17% Similarity=0.198 Sum_probs=33.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHH-HHH--cCCCeEEEEcCChhhHHHHH
Q 017052 193 KGSTVVIFGL-GTVGLSVAQG-AKA--RGASRIIGVDTNPEKCEKAK 235 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiql-a~~--~g~~~vi~v~~~~~~~~~l~ 235 (378)
.|+.+||+|+ +++|.++++. |+. .|+ +|+.+++++++++.+.
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~ 50 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLK 50 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHH
Confidence 5778888888 8999988764 553 588 8999999998876553
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.52 E-value=0.31 Score=36.38 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=46.9
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhCCCcEEe----CCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFL----NPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~-~~vi~v~~~~~~~~~l~~~g~~~vi----~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
+|.|+|| |.+|..++.++...+. .+++.++.++.+.+.+.-....... ... ..++.+.++ +.|+|+-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~--~~~~~~~~~-----~aDivVi 74 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLG--PEQLPDCLK-----GCDVVVI 74 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEES--GGGHHHHHT-----TCSEEEE
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEc--CCChHHHhC-----CCCEEEE
Confidence 6889997 9999999999988875 6888899887665554332221110 111 233444333 6899999
Q ss_pred ccCC
Q 017052 270 CIGD 273 (378)
Q Consensus 270 ~~g~ 273 (378)
+.|.
T Consensus 75 tag~ 78 (144)
T d1mlda1 75 PAGV 78 (144)
T ss_dssp CCSC
T ss_pred CCCc
Confidence 8884
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.51 E-value=0.051 Score=46.58 Aligned_cols=44 Identities=18% Similarity=0.354 Sum_probs=34.5
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhCCC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGV 239 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~--~~~~l~~~g~ 239 (378)
++|||+|+ |-+|..++..+...|. +|+++++... ..+.++.++.
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~ 47 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI 47 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence 58999998 9999999998888899 9999987543 3455555554
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=92.50 E-value=0.26 Score=39.92 Aligned_cols=81 Identities=22% Similarity=0.275 Sum_probs=55.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-CCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~-~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
-.|++|+|.|.|.+|..+++++...|+ ++++++.+..+.+.+.. .|.. .++.+ . +..-..|+.+=|
T Consensus 37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~-~~~~~---~--------~~~~~cDIl~Pc 103 (230)
T d1leha1 37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD-AVAPN---A--------IYGVTCDIFAPC 103 (230)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE-ECCGG---G--------TTTCCCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc-ccCCc---c--------cccccccEeccc
Confidence 479999999999999999999999999 99999999888766654 4543 22211 1 111267777766
Q ss_pred cCChHHHHHHHHHhc
Q 017052 271 IGDTGMITTALQSCC 285 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~ 285 (378)
..+...-......++
T Consensus 104 A~~~~I~~~~~~~l~ 118 (230)
T d1leha1 104 ALGAVLNDFTIPQLK 118 (230)
T ss_dssp SCSCCBSTTHHHHCC
T ss_pred ccccccChHHhhccC
Confidence 655333333444443
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=92.43 E-value=0.26 Score=37.63 Aligned_cols=94 Identities=17% Similarity=0.276 Sum_probs=62.1
Q ss_pred hhchhhhhhHHHHHhhcCC-CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCc
Q 017052 173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250 (378)
Q Consensus 173 ~~~~~~~ta~~al~~~~~~-~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~ 250 (378)
.+||+....+..| +..++ -.|++|+|+|- ..+|.-+..++...|+ +|+.+.+.. .
T Consensus 16 ~~PcTp~aI~~lL-~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t---------------------~ 72 (166)
T d1b0aa1 16 LRPCTPRGIVTLL-ERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT---------------------K 72 (166)
T ss_dssp SCCHHHHHHHHHH-HHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC---------------------S
T ss_pred CCCchHHHHHHHH-HHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc---------------------c
Confidence 4555444444433 55554 47999999998 6799999999999999 888774432 2
Q ss_pred hHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 251 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
++.+.++ .+|+++-++|.+..+. -..++++ ..++++|..
T Consensus 73 ~l~~~~~-----~ADivI~a~G~p~~i~--~~~vk~g-~vvIDvGi~ 111 (166)
T d1b0aa1 73 NLRHHVE-----NADLLIVAVGKPGFIP--GDWIKEG-AIVIDVGIN 111 (166)
T ss_dssp CHHHHHH-----HCSEEEECSCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred hhHHHHh-----hhhHhhhhccCccccc--ccccCCC-cEEEecCce
Confidence 3333333 3689999998764432 2345665 777777653
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=92.36 E-value=0.31 Score=42.00 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=32.6
Q ss_pred CCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 192 ~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
++.++|||+|+ |.+|..++..+...|. +|+++.|+.++
T Consensus 1 ~~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~ 39 (350)
T d1xgka_ 1 QQKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKG 39 (350)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcch
Confidence 35689999998 9999999999999999 88888886554
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=92.29 E-value=0.088 Score=41.48 Aligned_cols=39 Identities=23% Similarity=0.406 Sum_probs=34.5
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l 234 (378)
++|.|+|+|.+|...+.++...|. +|+..+.+++..+..
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~ 43 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG 43 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence 579999999999999988889999 899999999876654
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=92.24 E-value=0.37 Score=36.99 Aligned_cols=101 Identities=16% Similarity=0.200 Sum_probs=58.2
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhCCCcE--------------EeCCCC----CCchHHHH
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDT--NPEKCEKAKAFGVTE--------------FLNPND----NNEPVQQV 255 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~--~~~~~~~l~~~g~~~--------------vi~~~~----~~~~~~~~ 255 (378)
+|.|+|-|-+|+++.+++...+. +++++-. +.+....+-++...+ .++-.. ...+. +.
T Consensus 2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p-~~ 79 (168)
T d2g82a1 2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP-KE 79 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG-GG
T ss_pred EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh-HH
Confidence 58899999999999999888888 6777633 223334443322110 000000 00000 00
Q ss_pred HHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC
Q 017052 256 IKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 256 i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
+.+ ...++|+|+||+|.-...+.+...+..+ .+=|.+..+..+
T Consensus 80 i~W-~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~kd 122 (168)
T d2g82a1 80 IPW-AEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPAKG 122 (168)
T ss_dssp CCT-GGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCBS
T ss_pred Ccc-cccCCceeEeccccccchHHhhhhhccc-cceeeecccccc
Confidence 110 1127999999999765667777788765 555555555443
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=92.21 E-value=0.32 Score=41.35 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=63.5
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCc--------E-EeCCCCCCchHHHHHHHHhCC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--------E-FLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~--------~-vi~~~~~~~~~~~~i~~~~~~ 262 (378)
...++|||+|+|. |..+-.++++....+|..++.+++-.+.++++-.. + -+.. .+..+.+++ +..
T Consensus 105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i----~Da~~~l~~-~~~ 178 (312)
T d2b2ca1 105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC----GDGFEFLKN-HKN 178 (312)
T ss_dssp SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC----SCHHHHHHH-CTT
T ss_pred CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEE----chHHHHHHh-CCC
Confidence 4567899998754 44555777777766999999999999999885321 1 1111 234445554 344
Q ss_pred CccEEE-eccCC---------hHHHHHHHHHhccCCccEEEecc
Q 017052 263 GADYSF-ECIGD---------TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 263 ~~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+|+|| |.... .+.++.+.++|+++ |.++.-+.
T Consensus 179 ~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~ 221 (312)
T d2b2ca1 179 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE 221 (312)
T ss_dssp CEEEEEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred CCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence 899877 43321 13466778899997 98887643
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=92.20 E-value=0.33 Score=37.03 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=59.0
Q ss_pred eEEEEccChHHHH-HHHHHHHc-CCCeEEEEcCChhhHHHH-HhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 196 TVVIFGLGTVGLS-VAQGAKAR-GASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 196 ~VLI~Gag~vG~~-aiqla~~~-g~~~vi~v~~~~~~~~~l-~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+|.|+|+|.+|.- .+...+.. +. ++++++.++++.+.+ ++++...+.. ++.+.+ ...+|+|+-|+.
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~------~~~~ll----~~~iD~V~I~tp 71 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT------DYRDVL----QYGVDAVMIHAA 71 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS------STTGGG----GGCCSEEEECSC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccc------cHHHhc----ccccceeccccc
Confidence 6889999999964 55666555 55 777888888776655 4477654322 111111 126899999988
Q ss_pred ChHHHHHHHHHhccCCccEEEeccCC
Q 017052 273 DTGMITTALQSCCDGWGLAVTLGVPK 298 (378)
Q Consensus 273 ~~~~~~~~~~~l~~~~G~~v~~g~~~ 298 (378)
.....+.+..++.. |.=|.+.-+.
T Consensus 72 ~~~H~~~~~~al~~--gk~V~~EKP~ 95 (167)
T d1xeaa1 72 TDVHSTLAAFFLHL--GIPTFVDKPL 95 (167)
T ss_dssp GGGHHHHHHHHHHT--TCCEEEESCS
T ss_pred cccccccccccccc--ccccccCCCC
Confidence 77777788888886 5545664433
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.19 E-value=0.084 Score=38.40 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=30.7
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.++++|+|+|.+|+-+++++..+|. +|+.+.+++
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP 56 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence 3689999999999999999999999 899997754
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.18 E-value=0.11 Score=38.49 Aligned_cols=39 Identities=26% Similarity=0.377 Sum_probs=34.1
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.++++++|+|+|+|.+|+-++..++.+|. +|..+.+.+.
T Consensus 31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~ 69 (133)
T d1q1ra2 31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR 69 (133)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence 35678999999999999999999999999 8999977653
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=92.14 E-value=0.23 Score=37.62 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=33.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~ 232 (378)
++..+|.|+|+|.+|..++.++...+..+++.++.++++.+
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~ 45 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPE 45 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccch
Confidence 45678999999999999888888888768999988876543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=92.13 E-value=0.088 Score=37.89 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=31.1
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.++|+|+|+|.+|+-+++.++.+|. +|+.+.+.+.
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence 3689999999999999999999999 8999977653
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.11 E-value=1.5 Score=37.70 Aligned_cols=109 Identities=25% Similarity=0.359 Sum_probs=68.2
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhCCCcEEeCCCC-----------------
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNPND----------------- 247 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~--~~~~~~~~l~~~g~~~vi~~~~----------------- 247 (378)
+...+++++.|+...+|..|.+++..|+.+|.+-++.+. .+++|.+.++.+|++.+.....
T Consensus 90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~ 169 (355)
T d1jbqa_ 90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK 169 (355)
T ss_dssp HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence 444566677666666799999999999999994444442 3567889999999976542100
Q ss_pred -------------CCchH-------HHHHHHHhCCCccEEEeccCChHHHHH---HHHHhccCCccEEEecc
Q 017052 248 -------------NNEPV-------QQVIKRITDGGADYSFECIGDTGMITT---ALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 248 -------------~~~~~-------~~~i~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~~G~~v~~g~ 296 (378)
+.... ...+.+..++.+|.|+-++|+...+.. .++...++ -+++.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~vep 240 (355)
T d1jbqa_ 170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVDP 240 (355)
T ss_dssp HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeecc
Confidence 01011 112222234478999999987655443 34445555 67776643
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=92.03 E-value=0.2 Score=42.78 Aligned_cols=96 Identities=19% Similarity=0.211 Sum_probs=63.2
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC---------c--EEeCCCCCCchHHHHHHHH
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV---------T--EFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~---------~--~vi~~~~~~~~~~~~i~~~ 259 (378)
....++|||+|+|. |..+-++++.....+|.+++.+++-.+.++++-. + .++. .+..+.+++
T Consensus 75 ~~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-----~Da~~~l~~- 147 (312)
T d1uira_ 75 HPEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-----DDARAYLER- 147 (312)
T ss_dssp SSCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-----SCHHHHHHH-
T ss_pred CCCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-----chHHHHhhh-
Confidence 34568999998753 5566677777665599999999998888876421 1 1221 234445554
Q ss_pred hCCCccEEE-ecc---CC---------hHHHHHHHHHhccCCccEEEe
Q 017052 260 TDGGADYSF-ECI---GD---------TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 260 ~~~~~d~vi-d~~---g~---------~~~~~~~~~~l~~~~G~~v~~ 294 (378)
+.+.+|+|| |.. +. .+.++.+.++|+++ |.++.-
T Consensus 148 ~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~ 194 (312)
T d1uira_ 148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQ 194 (312)
T ss_dssp CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEE
T ss_pred cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEe
Confidence 344899877 542 21 23567788999997 987753
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.98 E-value=0.28 Score=37.69 Aligned_cols=95 Identities=15% Similarity=0.282 Sum_probs=62.9
Q ss_pred hhhchhhhhhHHHHHhhcCCC-CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCC
Q 017052 172 CLLSCGLSAGLGAAWNVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249 (378)
Q Consensus 172 a~~~~~~~ta~~al~~~~~~~-~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~ 249 (378)
+.+||+....+..| ++.++. .|++|+|+|. ..+|.-+..++...|+ +|+.+.+....
T Consensus 17 ~~~PcTp~aii~lL-~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~------------------- 75 (170)
T d1a4ia1 17 CFIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAH------------------- 75 (170)
T ss_dssp CCCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSS-------------------
T ss_pred CCCCChHHHHHHHH-HHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccccc-------------------
Confidence 45566554454434 566654 7999999998 6799999999999999 88887553222
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
+.+.++ ..|+++-++|.+..+. -..++++ -.++++|..
T Consensus 76 --l~~~~~-----~aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~ 113 (170)
T d1a4ia1 76 --LDEEVN-----KGDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN 113 (170)
T ss_dssp --HHHHHT-----TCSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred --HHHHHh-----hccchhhccccccccc--cccccCC-CeEeccCcc
Confidence 222221 4688888888764432 2356665 667777653
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=91.98 E-value=0.087 Score=43.00 Aligned_cols=38 Identities=24% Similarity=0.287 Sum_probs=33.4
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
...+++|+|+|+|..|+.++..++..|. .|+.++.+++
T Consensus 46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~ 83 (233)
T d1djqa3 46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK 83 (233)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence 3568899999999999999999999999 8999987653
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.89 E-value=0.37 Score=37.43 Aligned_cols=92 Identities=18% Similarity=0.218 Sum_probs=60.8
Q ss_pred eEEEEccChHHHHHHHHHHHc-CCCeEEEE-cCChhhHHH-HHhCCCcEEe-CCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGV-DTNPEKCEK-AKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~-g~~~vi~v-~~~~~~~~~-l~~~g~~~vi-~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+|.|+|+|.+|...++.++.. +. +++++ ++++++.+. .++++.+... .+ .++.+.+. ...+|+|+.++
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~---~~~iD~v~I~t 74 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH----GSYESLLE---DPEIDALYVPL 74 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHHHHH---CTTCCEEEECC
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec----CcHHHhhh---ccccceeeecc
Confidence 578899999999988888776 55 67755 666666444 4556643210 11 13333333 23789999998
Q ss_pred CChHHHHHHHHHhccCCccEEEeccC
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
......+.+..++.. |.=|.+..+
T Consensus 75 p~~~h~~~~~~~l~~--g~~v~~EKP 98 (184)
T d1ydwa1 75 PTSLHVEWAIKAAEK--GKHILLEKP 98 (184)
T ss_dssp CGGGHHHHHHHHHTT--TCEEEECSS
T ss_pred cchhhcchhhhhhhc--cceeecccc
Confidence 887778888888885 566666543
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=91.86 E-value=1 Score=33.55 Aligned_cols=94 Identities=10% Similarity=0.092 Sum_probs=57.9
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC----EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~----~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
+.++|.|.|.+|..+++.+...|. .+++++.++++. +.+...|...+. -+ ..-.+.+++..-..+|.++-+
T Consensus 4 nHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~-Gd---~~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 4 DHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GD---SNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SC---TTSHHHHHHHTTTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEE-cc---CcchHHHHHhccccCCEEEEc
Confidence 468899999999999999999999 788888876542 233334554443 21 122234444433478999988
Q ss_pred cCChHH---HHHHHHHhccCCccEEEe
Q 017052 271 IGDTGM---ITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 271 ~g~~~~---~~~~~~~l~~~~G~~v~~ 294 (378)
++.... .....+.+.+. -+++.-
T Consensus 79 ~~~d~~n~~~~~~~r~~~~~-~~iia~ 104 (153)
T d1id1a_ 79 SDNDADNAFVVLSAKDMSSD-VKTVLA 104 (153)
T ss_dssp SSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred cccHHHHHHHHHHHHHhCCC-CceEEE
Confidence 776432 12233345554 555544
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=91.84 E-value=0.11 Score=37.54 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=30.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
..++++|+|+|.+|+-+++.++.+|. +|+.+.+++
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence 34889999999999999999999999 888887654
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=91.61 E-value=0.26 Score=41.24 Aligned_cols=95 Identities=17% Similarity=0.175 Sum_probs=60.5
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC--------------c--EEeCCCCCCchHHH
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------------T--EFLNPNDNNEPVQQ 254 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~--------------~--~vi~~~~~~~~~~~ 254 (378)
....++|||+|+|. |..+-.+++. ...+|.+++.+++-.+.++++-. + +++.- +..+
T Consensus 70 ~~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~-----Da~~ 142 (276)
T d1mjfa_ 70 HPKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-----DGFE 142 (276)
T ss_dssp SSCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-----CHHH
T ss_pred CCCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC-----hHHH
Confidence 45568999998753 3334455554 44489999999999988886321 1 12221 2334
Q ss_pred HHHHHhCCCccEEE-eccCC---------hHHHHHHHHHhccCCccEEEec
Q 017052 255 VIKRITDGGADYSF-ECIGD---------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 255 ~i~~~~~~~~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+++ .+.+|+|| |.... .+.++.+.++|+++ |.++.-+
T Consensus 143 ~l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~ 190 (276)
T d1mjfa_ 143 FIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA 190 (276)
T ss_dssp HHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred HHhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence 4443 34899876 55542 24577788999998 9887643
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=91.53 E-value=0.41 Score=37.47 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=61.2
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc----EEeCCCCCCchHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT----EFLNPNDNNEPVQQVI 256 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~----~vi~~~~~~~~~~~~i 256 (378)
|.+.....++++||=+|+|. |..++.+|+ .+. +|++++.++...+.+++ .+.. .++..+ +.
T Consensus 44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d-----~~--- 112 (194)
T d1dusa_ 44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD-----LY--- 112 (194)
T ss_dssp HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS-----TT---
T ss_pred HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc-----hh---
Confidence 34667788999999998753 455556665 455 89999999988877764 2322 122221 10
Q ss_pred HHHhCCCccEEEec----cCC---hHHHHHHHHHhccCCccEEEe
Q 017052 257 KRITDGGADYSFEC----IGD---TGMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 257 ~~~~~~~~d~vid~----~g~---~~~~~~~~~~l~~~~G~~v~~ 294 (378)
....++.+|+|+-. .+. ...+..+.+.|+++ |+++.+
T Consensus 113 ~~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 156 (194)
T d1dusa_ 113 ENVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV 156 (194)
T ss_dssp TTCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred hhhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence 11123379998842 121 13467778899997 987653
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=91.48 E-value=0.4 Score=36.78 Aligned_cols=95 Identities=25% Similarity=0.330 Sum_probs=60.4
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHhCCCcE--------------Ee--------CCCC-CC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDT---NPEKCEKAKAFGVTE--------------FL--------NPND-NN 249 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~---~~~~~~~l~~~g~~~--------------vi--------~~~~-~~ 249 (378)
+|-|+|-|-+|+++.+.+...+. +++++-. +.+....+-++-..+ .+ +.++ .+
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 68899999999999999988888 6777633 334555554421100 11 1110 11
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
-+|. .-++|+|+||+|.-...+.+...+..+ .+-|.+..+..
T Consensus 81 i~W~-------~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~~ 122 (169)
T d1dssg1 81 IPWS-------KAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPSA 122 (169)
T ss_dssp CCHH-------HHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCCS
T ss_pred CCcc-------ccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCcc
Confidence 1221 117999999999866677788888876 66666665544
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.47 E-value=0.12 Score=42.30 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=30.7
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
+.-++|+|+|+|..|++++..+...|. +|++++++
T Consensus 4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~ 38 (268)
T d1c0pa1 4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD 38 (268)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence 345689999999999999999999999 89999764
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=91.44 E-value=0.09 Score=44.84 Aligned_cols=38 Identities=29% Similarity=0.381 Sum_probs=32.6
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.....++|+|+|+|..|+.++..++..|. +|++++.++
T Consensus 26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~ 63 (370)
T d2iida1 26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE 63 (370)
T ss_dssp CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 34556799999999999999999999999 899998754
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=91.43 E-value=1.4 Score=36.72 Aligned_cols=57 Identities=19% Similarity=0.299 Sum_probs=41.1
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhCCCcEEe
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~--~~~~~~~~l~~~g~~~vi 243 (378)
+...+.++..|+...+|..|++++..|+.+|.+-++.+. .++.+.+.++.+|+..++
T Consensus 53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~ 111 (292)
T d2bhsa1 53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELIL 111 (292)
T ss_dssp HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEE
T ss_pred HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcce
Confidence 444456666655556799999999999999994333332 266788999999997543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=91.39 E-value=0.2 Score=41.94 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=28.1
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA 234 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~-~~~~~~~~l 234 (378)
.+||+|+ +++|.+.++.+...|+ +|+.+. +++++.+.+
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~ 43 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL 43 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHH
Confidence 3577787 8999999999999999 676654 455544433
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=91.36 E-value=1.8 Score=33.11 Aligned_cols=136 Identities=13% Similarity=0.074 Sum_probs=76.1
Q ss_pred eEEEEccChHHHH-HHHHHHHcCCC-eEEE-EcCChhhHHH-HHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 196 TVVIFGLGTVGLS-VAQGAKARGAS-RIIG-VDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 196 ~VLI~Gag~vG~~-aiqla~~~g~~-~vi~-v~~~~~~~~~-l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
+|.|+|+|.+|.- .+...+..+-. ++++ .++++++.+. .++++...+.. ++.+.+. ...+|+|+.|+
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~------~~~ell~---~~~id~v~I~t 75 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD------SYEELLE---SGLVDAVDLTL 75 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES------CHHHHHH---SSCCSEEEECC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee------eeecccc---ccccceeeccc
Confidence 6889999999975 56666655421 5664 4666666554 45577665532 2333332 23789999998
Q ss_pred CChHHHHHHHHHhccCCccEEEeccCCCCCeeeccccc-c--ccccEEE-EeeeccCC-cCCcHHHHHHHHHcCCCC
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-F--LSGRTLK-GSLFGGWK-PKTDLPSLVNRYLKKEFM 343 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~--~~~~~i~-g~~~~~~~-~~~~~~~~~~~~~~~~~~ 343 (378)
......+.+..++.. |+=|.+..+.....-...... + .++..+. +... .+. ....+.++.+++.+|++.
T Consensus 76 p~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~-R~~~~~~~~~~~~~~i~~G~ig 149 (181)
T d1zh8a1 76 PVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENF-RENSYQKEFEDFYQVVAEGKPN 149 (181)
T ss_dssp CGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGG-GCCHHHHHHHHHHHHHHSCCCC
T ss_pred ccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeec-cccccCHHHHHHHHHHHCCCCc
Confidence 876667777777775 666676544332111111110 1 1233332 2211 111 123567788888888753
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=91.30 E-value=0.088 Score=43.50 Aligned_cols=34 Identities=29% Similarity=0.481 Sum_probs=29.3
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
+.|||+|+ +++|++.++.+...|+ +|+.++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence 46789987 9999999999999999 8998887653
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.29 E-value=0.83 Score=35.20 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=49.7
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhCCCc---------EEeCCCCCCchHHHHHHHHhCCCc
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAFGVT---------EFLNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~--~~~~~l~~~g~~---------~vi~~~~~~~~~~~~i~~~~~~~~ 264 (378)
+|.|+|+|..|.+++..+...|. +|+...+.. +..+.+.+-... ..+.. ..++.+.+. ..
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~-----~a 72 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW---PEQLEKCLE-----NA 72 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC---GGGHHHHHT-----TC
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccc---cccHHHHHh-----cc
Confidence 58899999999999999988888 888887743 334444332110 01111 123333332 57
Q ss_pred cEEEeccCChHHHHHHHHHhc
Q 017052 265 DYSFECIGDTGMITTALQSCC 285 (378)
Q Consensus 265 d~vid~~g~~~~~~~~~~~l~ 285 (378)
|+|+.++.. ..++..++.+.
T Consensus 73 d~Ii~avps-~~~~~~~~~l~ 92 (180)
T d1txga2 73 EVVLLGVST-DGVLPVMSRIL 92 (180)
T ss_dssp SEEEECSCG-GGHHHHHHHHT
T ss_pred chhhcccch-hhhHHHHHhhc
Confidence 999999986 45555555443
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.25 E-value=0.12 Score=37.65 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=30.4
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
++++|+|+|.+|+-+++.++.+|. +|+.+.+++
T Consensus 23 k~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~ 55 (125)
T d3grsa2 23 GRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD 55 (125)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence 789999999999999999999999 899997764
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.02 E-value=0.099 Score=43.40 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=28.8
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+|+|+|+|..|++++.+++..|...|+++++++
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 689999999999999999999975787877754
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=90.93 E-value=0.13 Score=36.76 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=30.4
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.++++|+|+|.+|+-+++.++.+|. +|+.+.+.+
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE 54 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence 3789999999999999999999999 898887754
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=90.91 E-value=0.13 Score=40.22 Aligned_cols=83 Identities=20% Similarity=0.365 Sum_probs=55.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|..++++++.+|. +|++.++++... .... ..++.+.++ ..|+|+-+..
T Consensus 41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~~-------~~~~------~~~l~ell~-----~sDiv~~~~p 101 (181)
T d1qp8a1 41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKEG-------PWRF------TNSLEEALR-----EARAAVCALP 101 (181)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCCS-------SSCC------BSCSHHHHT-----TCSEEEECCC
T ss_pred cCceEEEeccccccccceeeeecccc-cccccccccccc-------ceee------eechhhhhh-----ccchhhcccc
Confidence 58899999999999999999999999 999998764321 1111 112222222 4688876654
Q ss_pred Ch-H----HHHHHHHHhccCCccEEEec
Q 017052 273 DT-G----MITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 273 ~~-~----~~~~~~~~l~~~~G~~v~~g 295 (378)
-+ + .-...+..|+++ ..+|.++
T Consensus 102 l~~~t~~li~~~~l~~mk~~-ailIN~~ 128 (181)
T d1qp8a1 102 LNKHTRGLVKYQHLALMAED-AVFVNVG 128 (181)
T ss_dssp CSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred cccccccccccceeeecccc-ceEEecc
Confidence 32 1 124567778876 7777764
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=90.90 E-value=0.15 Score=37.21 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=31.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
..++++|+|+|.+|+-+++..+.+|. +|+.+.+.+
T Consensus 25 ~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~ 59 (125)
T d1ojta2 25 VPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD 59 (125)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence 35899999999999999999999999 899997653
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=90.84 E-value=0.26 Score=40.34 Aligned_cols=37 Identities=35% Similarity=0.400 Sum_probs=32.3
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
..--.|++|+|.|.|.+|..+++++...|+ +|+++..
T Consensus 26 ~~~l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD 62 (242)
T d1v9la1 26 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD 62 (242)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence 334589999999999999999999999999 8888754
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=90.83 E-value=0.093 Score=42.94 Aligned_cols=33 Identities=21% Similarity=0.464 Sum_probs=28.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+|+|+|+|..|+.++..++..|.+.|++++.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 589999999999999999999974699987754
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.80 E-value=0.092 Score=44.15 Aligned_cols=33 Identities=24% Similarity=0.335 Sum_probs=29.8
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.|+|+|+|+.|++++..++..|. +|++++++++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence 69999999999999999999999 8999987653
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=90.79 E-value=0.11 Score=37.80 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=31.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
..++++|+|+|.+|+-+++..+.+|. +|+.+.+++.
T Consensus 24 ~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~ 59 (123)
T d1dxla2 24 IPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE 59 (123)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred cCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence 35789999999999999999999999 9999977654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=90.68 E-value=0.14 Score=43.32 Aligned_cols=37 Identities=30% Similarity=0.386 Sum_probs=31.8
Q ss_pred CCCeEEEEcc-C--hHHHHHHHHHHHcCCCeEEEEcCChhh
Q 017052 193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEK 230 (378)
Q Consensus 193 ~g~~VLI~Ga-g--~vG~~aiqla~~~g~~~vi~v~~~~~~ 230 (378)
+|+++||+|+ | ++|.+.++.+...|+ +|+.+.+++..
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL 46 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence 6899999997 5 799999999999999 88888776543
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.53 E-value=0.43 Score=40.05 Aligned_cols=99 Identities=13% Similarity=0.165 Sum_probs=63.4
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC--------cE-EeCCCCCCchHHHHHHHHh
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------TE-FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~--------~~-vi~~~~~~~~~~~~i~~~~ 260 (378)
.....++|||+|+|. |..+-.+++..+..++++++.+++-.+.++++-. ++ -+.. .+..+.++. +
T Consensus 75 ~~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~----~Da~~~l~~-~ 148 (285)
T d2o07a1 75 SHPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV----GDGFEFMKQ-N 148 (285)
T ss_dssp TSSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHHHT-C
T ss_pred hCcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE----ccHHHHHhc-C
Confidence 344568999997753 4555667777776699999999999888877431 11 1111 133344443 3
Q ss_pred CCCccEEE-eccCC---------hHHHHHHHHHhccCCccEEEec
Q 017052 261 DGGADYSF-ECIGD---------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~~~~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.+.+|+|+ |.... .+.++.+.+.|+++ |.++.-.
T Consensus 149 ~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~ 192 (285)
T d2o07a1 149 QDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG 192 (285)
T ss_dssp SSCEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence 34899877 54431 13466778899997 9887654
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=90.51 E-value=0.12 Score=44.25 Aligned_cols=35 Identities=17% Similarity=0.378 Sum_probs=31.0
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.++|+|+|||..|+.++..+...|. +|++++.++.
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence 5789999999999999999988898 8999987653
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=90.51 E-value=0.6 Score=38.65 Aligned_cols=94 Identities=18% Similarity=0.156 Sum_probs=63.8
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhCCCc-EEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSF 268 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~~~g~~-~vi~~~~~~~~~~~~i~~~~~~~~d~vi 268 (378)
..++.+||=+|+|. |..+..+++.. +. ++++++.+++..+.+++.... ..+..+..+.. +..+.+|+|+
T Consensus 82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~-------~~~~sfD~v~ 152 (268)
T d1p91a_ 82 DDKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP-------FSDTSMDAII 152 (268)
T ss_dssp CTTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-------BCTTCEEEEE
T ss_pred CCCCCEEEEeCCCC-cHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeeehhhcc-------CCCCCEEEEe
Confidence 46778899888753 66666777765 55 899999999998888764332 22222110111 1223789999
Q ss_pred eccCChHHHHHHHHHhccCCccEEEec
Q 017052 269 ECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 269 d~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
... .+..+.++.+.|+++ |+++...
T Consensus 153 ~~~-~~~~~~e~~rvLkpg-G~l~~~~ 177 (268)
T d1p91a_ 153 RIY-APCKAEELARVVKPG-GWVITAT 177 (268)
T ss_dssp EES-CCCCHHHHHHHEEEE-EEEEEEE
T ss_pred ecC-CHHHHHHHHHHhCCC-cEEEEEe
Confidence 654 346788999999997 9988764
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.48 E-value=0.13 Score=43.75 Aligned_cols=36 Identities=25% Similarity=0.423 Sum_probs=31.4
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
++..+|+|+|+|..|+.++..++..|. +|+++..++
T Consensus 3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 455689999999999999999999999 899997654
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.47 E-value=0.25 Score=42.52 Aligned_cols=40 Identities=35% Similarity=0.498 Sum_probs=28.5
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+.....+|++||-+|+|. |..++.+| ..|+++|++++.++
T Consensus 32 ~~~~~~~~~~VLDlGcGt-G~ls~~aa-~~Ga~~V~avd~s~ 71 (328)
T d1g6q1_ 32 QNKDLFKDKIVLDVGCGT-GILSMFAA-KHGAKHVIGVDMSS 71 (328)
T ss_dssp HHHHHHTTCEEEEETCTT-SHHHHHHH-HTCCSEEEEEESST
T ss_pred hccccCCcCEEEEeCCCC-CHHHHHHH-HhCCCEEEEEeCCH
Confidence 334456899999999863 55554444 46877999999886
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=90.46 E-value=1.2 Score=33.87 Aligned_cols=96 Identities=18% Similarity=0.230 Sum_probs=57.2
Q ss_pred eEEEEccChHHHHHHHHHHHc---CCCeEEEEcC--ChhhHHHHHhC----CC---cE-------Ee--------CCCC-
Q 017052 196 TVVIFGLGTVGLSVAQGAKAR---GASRIIGVDT--NPEKCEKAKAF----GV---TE-------FL--------NPND- 247 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~---g~~~vi~v~~--~~~~~~~l~~~----g~---~~-------vi--------~~~~- 247 (378)
+|.|+|-|-+|+++.+.+... .. +++++-. +.+....+-++ |. +. ++ +.++
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p 80 (169)
T d1hdgo1 2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence 688999999999999987643 35 6777632 33444444332 11 10 11 1110
Q ss_pred CCchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC
Q 017052 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 248 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
.+-+|.+ -++|+|+||+|.-...+.+...+..+ -+=|.+..+..+
T Consensus 81 ~~i~W~~-------~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~kd 125 (169)
T d1hdgo1 81 SKLPWKD-------LGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPAKG 125 (169)
T ss_dssp GGSCHHH-------HTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCBS
T ss_pred hhCCccc-------cCCCEEEEecceeccccchhhhccCC-CceEEEecccCC
Confidence 1112211 17999999999865667777788775 555666555443
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=90.44 E-value=2.3 Score=31.40 Aligned_cols=40 Identities=30% Similarity=0.412 Sum_probs=32.3
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHH
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCE 232 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~ 232 (378)
...+|.|+|+|.+|..++..+...| +.+++.++.++++.+
T Consensus 4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~ 44 (146)
T d1ez4a1 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTK 44 (146)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhH
Confidence 3568999999999999888887766 458999999887643
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=90.36 E-value=0.16 Score=38.92 Aligned_cols=36 Identities=31% Similarity=0.395 Sum_probs=29.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCC-eEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~-~vi~v~~~~ 228 (378)
.|++|+|+|+|.+|+.+++-++..+.+ +|+.++.++
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 489999999999999999988887743 677776654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=90.30 E-value=0.13 Score=40.98 Aligned_cols=86 Identities=19% Similarity=0.249 Sum_probs=56.1
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.|++|.|+|.|.+|+.++++++..|+ +|++.++...+... .. +. ..++.+.+.. .|+|.-+..
T Consensus 44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~---~~----~~----~~~l~~l~~~-----~D~v~~~~p 106 (199)
T d1dxya1 44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGDH---PD----FD----YVSLEDLFKQ-----SDVIDLHVP 106 (199)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSCC---TT----CE----ECCHHHHHHH-----CSEEEECCC
T ss_pred cceeeeeeecccccccccccccccce-eeeccCCccchhhh---cc----hh----HHHHHHHHHh-----cccceeeec
Confidence 47899999999999999999999999 99999875432100 00 01 1133333332 577776553
Q ss_pred Ch-H----HHHHHHHHhccCCccEEEecc
Q 017052 273 DT-G----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~-~----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+ + .-...+..|+++ ..+|.++-
T Consensus 107 lt~~T~~li~~~~l~~mk~~-a~lIN~aR 134 (199)
T d1dxya1 107 GIEQNTHIINEAAFNLMKPG-AIVINTAR 134 (199)
T ss_dssp CCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred ccccccccccHHHhhccCCc-eEEEeccc
Confidence 22 1 124567888886 77777754
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=90.16 E-value=0.12 Score=38.97 Aligned_cols=83 Identities=13% Similarity=-0.009 Sum_probs=50.4
Q ss_pred EEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCChHHHH
Q 017052 199 IFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMIT 278 (378)
Q Consensus 199 I~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~ 278 (378)
++|+|.+|.+++..++..+. .+.+..|+.++.+.+.+.+.....+..+ . -...|+||=|+.. +.+.
T Consensus 4 fIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~----~--------~~~~DiVil~v~d-~~i~ 69 (153)
T d2i76a2 4 FVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEK----H--------PELNGVVFVIVPD-RYIK 69 (153)
T ss_dssp EESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC----C--------CC---CEEECSCT-TTHH
T ss_pred EEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhh----h--------hccCcEEEEeccc-hhhh
Confidence 56999999999887765443 4457889999988887765533322221 0 1156999999876 5677
Q ss_pred HHHHHhccCCccEEEec
Q 017052 279 TALQSCCDGWGLAVTLG 295 (378)
Q Consensus 279 ~~~~~l~~~~G~~v~~g 295 (378)
.....++.....++.+.
T Consensus 70 ~v~~~l~~~~~ivi~~s 86 (153)
T d2i76a2 70 TVANHLNLGDAVLVHCS 86 (153)
T ss_dssp HHHTTTCCSSCCEEECC
T ss_pred HHHhhhcccceeeeecc
Confidence 77777765413444443
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=90.12 E-value=0.19 Score=41.07 Aligned_cols=89 Identities=13% Similarity=0.148 Sum_probs=57.1
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-EeCCCCCCchHHHHHHHHh-CCCcc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRIT-DGGAD 265 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi~~~~~~~~~~~~i~~~~-~~~~d 265 (378)
.++++||=+|+| .|..+..+++ .|. ++++++.+++-.+.+++ .+... ++..+ +..+. .+.||
T Consensus 36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d---------~~~~~~~~~fD 103 (246)
T d1y8ca_ 36 LVFDDYLDLACG-TGNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQD---------ISNLNINRKFD 103 (246)
T ss_dssp CCTTEEEEETCT-TSTTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCC---------GGGCCCSCCEE
T ss_pred CCCCeEEEEeCc-CCHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeeccc---------hhhhccccccc
Confidence 456789999986 3666666665 477 89999999998777654 34322 33221 11222 33799
Q ss_pred EEEeccCC------h----HHHHHHHHHhccCCccEEE
Q 017052 266 YSFECIGD------T----GMITTALQSCCDGWGLAVT 293 (378)
Q Consensus 266 ~vid~~g~------~----~~~~~~~~~l~~~~G~~v~ 293 (378)
+|+-..+. . ..+..+.++|+++ |.++.
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~ 140 (246)
T d1y8ca_ 104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF 140 (246)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred ccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence 98843221 1 2466778888997 98774
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=90.11 E-value=0.066 Score=46.97 Aligned_cols=31 Identities=19% Similarity=0.390 Sum_probs=26.0
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
+|||+|+ |-+|..++..+...|...|++++.
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~ 33 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 6999988 999999999998889855676654
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=90.05 E-value=0.52 Score=40.40 Aligned_cols=37 Identities=22% Similarity=0.187 Sum_probs=29.5
Q ss_pred CCeEEEEcc---ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017052 194 GSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (378)
Q Consensus 194 g~~VLI~Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~~~ 231 (378)
++..||+|+ .++|++.++.+...|+ +|+.+.++....
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~ 41 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYN 41 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhh
Confidence 567789995 3899999999999999 788777665543
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=90.02 E-value=1.6 Score=33.15 Aligned_cols=95 Identities=19% Similarity=0.190 Sum_probs=54.5
Q ss_pred CCCCCCeEEEEcc--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCc-EEeCCCCCCchHHHHHHHHhCC
Q 017052 190 DISKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITDG 262 (378)
Q Consensus 190 ~~~~g~~VLI~Ga--g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~-~vi~~~~~~~~~~~~i~~~~~~ 262 (378)
.+.+|.+||=.++ |.+|+ . |...|+ ++++++.+++..+.+++ ++.. .+...+ ...+.. .......
T Consensus 38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~--~d~~~~-~~~~~~~ 109 (171)
T d1ws6a1 38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALP--VEVFLP-EAKAQGE 109 (171)
T ss_dssp HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSC--HHHHHH-HHHHTTC
T ss_pred cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeee--hhcccc-cccccCC
Confidence 4678899988855 55554 3 334688 89999999998877654 5543 344432 122211 2222333
Q ss_pred CccEEE-ec---cCChHHHHHHHH--HhccCCccEEE
Q 017052 263 GADYSF-EC---IGDTGMITTALQ--SCCDGWGLAVT 293 (378)
Q Consensus 263 ~~d~vi-d~---~g~~~~~~~~~~--~l~~~~G~~v~ 293 (378)
.||+|| |. .+-...+..++. .++++ |.++.
T Consensus 110 ~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi 145 (171)
T d1ws6a1 110 RFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL 145 (171)
T ss_dssp CEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred ccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence 899987 42 222234444433 46775 76554
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.99 E-value=0.27 Score=42.28 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=27.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~ 225 (378)
++|||+|+ |-+|..++..+...|. +|++++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld 33 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID 33 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence 68999998 9999999999999998 898885
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.74 E-value=0.27 Score=39.00 Aligned_cols=41 Identities=39% Similarity=0.553 Sum_probs=36.8
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~ 237 (378)
+|.|+|.|-+|+.++..+...|. +|++++.++++.+.+++-
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g 42 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG 42 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence 57889999999999988888998 999999999999988764
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.60 E-value=0.22 Score=42.51 Aligned_cols=45 Identities=29% Similarity=0.418 Sum_probs=32.6
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~ 231 (378)
+.+.....+|++||-+|+| .|..++.+|+ .|+++|++++.++.-.
T Consensus 27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~ 71 (311)
T d2fyta1 27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILY 71 (311)
T ss_dssp HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHH
T ss_pred HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHH
Confidence 3344466789999999986 4565555555 5777999999988643
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=89.44 E-value=0.062 Score=43.63 Aligned_cols=93 Identities=15% Similarity=0.229 Sum_probs=60.7
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHH---cCCCeEEEEcCChhhHHHHHh----CCCcE---EeCCCCCCchHHHHHHHHh
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKA---RGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~---~g~~~vi~v~~~~~~~~~l~~----~g~~~---vi~~~~~~~~~~~~i~~~~ 260 (378)
++++.+||-+|+|. |..+..+++. .++ +|++++.+++-++.+++ .+... ....+ . ..+.
T Consensus 37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d--~-------~~~~ 105 (225)
T d1im8a_ 37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND--I-------RHVE 105 (225)
T ss_dssp CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC--T-------TTCC
T ss_pred cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccch--h-------hccc
Confidence 68899999999853 6666666664 477 99999999998888765 23222 22211 1 1112
Q ss_pred CCCccEEEeccCC--------hHHHHHHHHHhccCCccEEEec
Q 017052 261 DGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 261 ~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
...+|+++-...- ...+..+.+.|+++ |.++...
T Consensus 106 ~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~ 147 (225)
T d1im8a_ 106 IKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE 147 (225)
T ss_dssp CCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cccceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence 2256766543221 24688899999997 9998764
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=89.31 E-value=1.7 Score=31.18 Aligned_cols=92 Identities=11% Similarity=0.089 Sum_probs=59.9
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 274 (378)
+.++|.|.|.+|+.+++.++ +. .+++++.++++.+.++..|...+. -+ ..-.+.+++..-..++.++-++...
T Consensus 1 kHivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd---~~~~~~L~~a~i~~A~~vi~~~~~d 73 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GD---PTRVSDLEKANVRGARAVIVNLESD 73 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SC---TTSHHHHHHTTCTTCSEEEECCSSH
T ss_pred CEEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cc---cCCHHHHHHhhhhcCcEEEEeccch
Confidence 35788899999998887764 44 677888999999998888875544 22 1223445554334788888777653
Q ss_pred HH---HHHHHHHhccCCccEEEe
Q 017052 275 GM---ITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 275 ~~---~~~~~~~l~~~~G~~v~~ 294 (378)
.. .....+.+.+. .+++..
T Consensus 74 ~~n~~~~~~~r~~~~~-~~iia~ 95 (129)
T d2fy8a1 74 SETIHCILGIRKIDES-VRIIAE 95 (129)
T ss_dssp HHHHHHHHHHHHHCSS-SCEEEE
T ss_pred hhhHHHHHHHHHHCCC-ceEEEE
Confidence 32 22344456665 555554
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=89.06 E-value=0.25 Score=35.60 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=30.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+++++|+|+|.+|+-+++.+...|. +|+.+.+++
T Consensus 31 ~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~ 65 (122)
T d1xhca2 31 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA 65 (122)
T ss_dssp HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred cCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence 45799999999999999999999999 898887764
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=89.05 E-value=1.6 Score=34.33 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=61.4
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEe
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 269 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid 269 (378)
+..||=+|+| .|..++.+|+..--..+++++.+......+ ++.+.+.+.-...+...+ ...+.++.+|.|+-
T Consensus 30 ~PlvLeIGcG-~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l---~~~~~~~~~d~v~i 105 (204)
T d2fcaa1 30 NPIHIEVGTG-KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL---TDVFEPGEVKRVYL 105 (204)
T ss_dssp CCEEEEECCT-TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH---HHHCCTTSCCEEEE
T ss_pred CceEEEEEec-CcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhh---hcccCchhhhcccc
Confidence 3445556876 488889999886333999999999876654 446665543222112222 22233347887764
Q ss_pred ccCC--------------hHHHHHHHHHhccCCccEEEec
Q 017052 270 CIGD--------------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 270 ~~g~--------------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
.... +..+..+.+.|+++ |.+....
T Consensus 106 ~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~T 144 (204)
T d2fcaa1 106 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT 144 (204)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred ccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEE
Confidence 4332 25788889999997 9987763
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=88.91 E-value=0.38 Score=40.57 Aligned_cols=96 Identities=13% Similarity=0.147 Sum_probs=62.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC--------c--EEeCCCCCCchHHHHHHHHhC
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------T--EFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~--------~--~vi~~~~~~~~~~~~i~~~~~ 261 (378)
..-++|||+|+|. |..+-.++++.+..+|++++.+++-.+.++++-. + .++. .+..+.+++ +.
T Consensus 88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~-----~Da~~~l~~-~~ 160 (295)
T d1inla_ 88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI-----ANGAEYVRK-FK 160 (295)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE-----SCHHHHGGG-CS
T ss_pred CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh-----hhHHHHHhc-CC
Confidence 3458999998753 4456677777776689999999998888877421 1 1221 123344443 33
Q ss_pred CCccEEE-eccCC----------hHHHHHHHHHhccCCccEEEec
Q 017052 262 GGADYSF-ECIGD----------TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 ~~~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.+|+|| |+... .+.++.+.++|+++ |.++.-.
T Consensus 161 ~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~ 204 (295)
T d1inla_ 161 NEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET 204 (295)
T ss_dssp SCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred CCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEec
Confidence 4899877 54321 24567788899997 9887654
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=88.86 E-value=2.4 Score=32.19 Aligned_cols=100 Identities=22% Similarity=0.282 Sum_probs=58.0
Q ss_pred eEEEEccChHHHHHHHHHHHc-CCCeEEEEcC---ChhhHHHHHhCCCcE--------------EeCCCC----CCchHH
Q 017052 196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGVDT---NPEKCEKAKAFGVTE--------------FLNPND----NNEPVQ 253 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~---~~~~~~~l~~~g~~~--------------vi~~~~----~~~~~~ 253 (378)
+|.|+|-|-+|+++.+++... .. +++++-. +.+....+-++-..+ .++-.. +..+.
T Consensus 3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p- 80 (169)
T d1u8fo1 3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP- 80 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCCh-
Confidence 688999999999999877655 45 7777733 344555554421100 111000 00010
Q ss_pred HHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 254 QVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 254 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.+. +..-++|+|+||+|.-...+.+...+..+ .+-|.+..+..
T Consensus 81 ~~i~-W~~~~vDiViEcTG~f~~~~~~~~hl~~g-akkViiSaP~~ 124 (169)
T d1u8fo1 81 SKIK-WGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAPSA 124 (169)
T ss_dssp GGCC-TTTTTCCEEEECSSSCCSHHHHGGGGGGT-CSEEEESSCCS
T ss_pred hhCC-ccccCCCEEEEecceeccHHHHHHHHhcC-CceEeeccccc
Confidence 0110 11127999999999755566777788876 66666665544
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=88.42 E-value=1.2 Score=33.90 Aligned_cols=96 Identities=23% Similarity=0.225 Sum_probs=57.3
Q ss_pred eEEEEccChHHHHHHHHHHHc-CCCeEEEEcCCh--hhHHHHHhC----CC---cE-------Ee--------CCCC-CC
Q 017052 196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNP--EKCEKAKAF----GV---TE-------FL--------NPND-NN 249 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~--~~~~~l~~~----g~---~~-------vi--------~~~~-~~ 249 (378)
+|.|+|-|-+|+++.+++... .. +++++-... +....+-++ |. +. ++ +.++ .+
T Consensus 3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~ 81 (166)
T d1gado1 3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN 81 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence 578999999999999988765 35 677664322 333333332 11 10 11 1110 11
Q ss_pred chHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCCC
Q 017052 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300 (378)
Q Consensus 250 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 300 (378)
-+|. + -++|+|+||+|--...+.+...+..+ .+=|.+..+..+
T Consensus 82 i~W~----~---~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP~~d 124 (166)
T d1gado1 82 LKWD----E---VGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPSKD 124 (166)
T ss_dssp GCHH----H---HTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCSS
T ss_pred CCcc----c---cCCCEEEEccccccCHHHHHHHhcCC-CceEEeeccccc
Confidence 1221 1 17999999999766667777888876 666666655543
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.19 E-value=0.22 Score=40.11 Aligned_cols=32 Identities=16% Similarity=0.379 Sum_probs=28.7
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.|+|+|+|..|+.++..+...|. +|+++++++
T Consensus 7 DviViGaG~~Gl~~A~~La~~G~-~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVDGK-KVLHIDKQD 38 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence 38899999999999999989998 899998865
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=88.17 E-value=0.85 Score=34.95 Aligned_cols=43 Identities=21% Similarity=0.318 Sum_probs=37.3
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~ 239 (378)
+|-|+|.|.+|..++.-+...|. +|++.++++++.+.+.+.+.
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~ 45 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA 45 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence 47788999999999998888999 89999999999988866443
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=87.89 E-value=0.17 Score=42.08 Aligned_cols=32 Identities=28% Similarity=0.532 Sum_probs=28.7
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
+|+|+|+|..|+.++..+...|. +|+.++.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 58999999999999999999999 899997753
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=87.86 E-value=0.22 Score=40.90 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=29.9
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
..|+|+|+|+.|++++..|...|. +|+.++.+++
T Consensus 5 ~DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~ 38 (253)
T d2gqfa1 5 SENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK 38 (253)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence 358999999999999999999998 8999988764
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=87.84 E-value=2.4 Score=35.61 Aligned_cols=99 Identities=24% Similarity=0.270 Sum_probs=63.6
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhCCCcEEeCCCC-----------------
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT--NPEKCEKAKAFGVTEFLNPND----------------- 247 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~--~~~~~~~l~~~g~~~vi~~~~----------------- 247 (378)
+...+.+++.|+...+|.-|++++..|+.+|.+-++++.. +..+...++.+|+..+.....
T Consensus 54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~ 133 (310)
T d1y7la1 54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD 133 (310)
T ss_dssp HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence 3445577776666677999999999999999965555533 556788888899876541100
Q ss_pred ----------CCch--------HHHHHHHHhCCCccEEEeccCChHHHHHHHHHhc
Q 017052 248 ----------NNEP--------VQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285 (378)
Q Consensus 248 ----------~~~~--------~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 285 (378)
.+.. ....+.+..++.+|.|+-++|+...+.-....++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk 189 (310)
T d1y7la1 134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK 189 (310)
T ss_dssp TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence 0111 1122333344478999999988766665555553
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=87.48 E-value=0.24 Score=40.35 Aligned_cols=33 Identities=33% Similarity=0.560 Sum_probs=28.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.|+|+|+|+.|++++..+...|. +|+.++.++.
T Consensus 4 DViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK 36 (251)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence 48899999999999988888999 8999987653
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.39 E-value=0.57 Score=37.40 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=62.7
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC----CcE--EeCCCCCCchHHHHHHHHhCCC
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG----VTE--FLNPNDNNEPVQQVIKRITDGG 263 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g----~~~--vi~~~~~~~~~~~~i~~~~~~~ 263 (378)
...++.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+++.. ... ++..+ -.++ ....+.
T Consensus 57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d--~~~~-----~~~~~~ 127 (222)
T d2ex4a1 57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG--LQDF-----TPEPDS 127 (222)
T ss_dssp -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECC--GGGC-----CCCSSC
T ss_pred CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccccc--cccc-----cccccc
Confidence 456778899998863 7777777766665 8999999999988887632 222 22221 1111 011237
Q ss_pred ccEEEecc-----CCh---HHHHHHHHHhccCCccEEEecc
Q 017052 264 ADYSFECI-----GDT---GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 264 ~d~vid~~-----g~~---~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
+|+|+... ..+ ..+..+.+.|+++ |.++....
T Consensus 128 fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~ 167 (222)
T d2ex4a1 128 YDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN 167 (222)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred ccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence 89988632 222 3577788899997 99887643
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=87.37 E-value=1 Score=34.46 Aligned_cols=98 Identities=19% Similarity=0.312 Sum_probs=55.9
Q ss_pred eEEEEccChHHHHHHHHHHHcC----CCeEEEEcC--ChhhHHHHHhCCC-------cE-------EeCCCC----CCch
Q 017052 196 TVVIFGLGTVGLSVAQGAKARG----ASRIIGVDT--NPEKCEKAKAFGV-------TE-------FLNPND----NNEP 251 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g----~~~vi~v~~--~~~~~~~l~~~g~-------~~-------vi~~~~----~~~~ 251 (378)
+|.|+|-|-+|+++.+.+...+ . +++++-. +.+....+-++.. +. +++-.. ...+
T Consensus 3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~ 81 (173)
T d1obfo1 3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN 81 (173)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence 5889999999999998776432 3 5666642 3344444433211 11 111000 0000
Q ss_pred HHHHHHHHh-CC-CccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 252 VQQVIKRIT-DG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 252 ~~~~i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
..++. .. ++|+|+||+|.-...+.+...|..+ .+-|.+..+..
T Consensus 82 ----p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP~~ 126 (173)
T d1obfo1 82 ----PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAPGG 126 (173)
T ss_dssp ----GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSCCC
T ss_pred ----HHHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecCCC
Confidence 11111 12 8999999999755566777888776 66666665544
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=87.34 E-value=2.2 Score=33.08 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=60.8
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHh----CCCcE-EeCCCCCCchHHHHHHHHh
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~-~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi~~~~~~~~~~~~i~~~~ 260 (378)
....+++|+.+|=.+.|.=|+.. .+++. -+. ++++++++++..+.+++ ++... +++.+ -.++...+..+.
T Consensus 17 ~~l~~~~~~~~lD~t~G~Gghs~-~il~~~~~~-~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~--f~~~~~~~~~~~ 92 (192)
T d1m6ya2 17 EFLKPEDEKIILDCTVGEGGHSR-AILEHCPGC-RIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVS--YREADFLLKTLG 92 (192)
T ss_dssp HHHCCCTTCEEEETTCTTSHHHH-HHHHHCTTC-EEEEEESCHHHHHHHHHHTGGGTTTEEEEECC--GGGHHHHHHHTT
T ss_pred HhhCCCCCCEEEEecCCCcHHHH-HHHhcCCCC-eEEEeechHHHHHHHHHhhccccccccchhHH--HhhHHHHHHHcC
Confidence 44567888866443334434433 34443 355 89999999999888876 33222 23322 345555555554
Q ss_pred CCCccEE-EeccCCh--------------HHHHHHHHHhccCCccEEEecc
Q 017052 261 DGGADYS-FECIGDT--------------GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 261 ~~~~d~v-id~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+.+|.| +|..-++ ..+..+...++++ |+++.+..
T Consensus 93 ~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f 142 (192)
T d1m6ya2 93 IEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISF 142 (192)
T ss_dssp CSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEES
T ss_pred CCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeecc
Confidence 4588865 4643221 3455566677776 77776643
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=87.32 E-value=1.9 Score=31.62 Aligned_cols=37 Identities=19% Similarity=0.295 Sum_probs=29.9
Q ss_pred eEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHH
Q 017052 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCE 232 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~ 232 (378)
+|.|+|+|.+|..++..+...+ +.+++.++.++++.+
T Consensus 2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~ 39 (142)
T d1guza1 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ 39 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence 5788899999999888887776 358999998887654
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=87.32 E-value=0.14 Score=40.12 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=30.5
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
+++.|+|+|+|+.|+.++..|..+|. +|+.+.+.+.
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~~ 39 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGMEK 39 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSST
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeecc
Confidence 45689999999999999999999999 7888865443
|
| >d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Hypothetical methyltransferase PH1374 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=87.21 E-value=1.2 Score=37.64 Aligned_cols=99 Identities=18% Similarity=0.242 Sum_probs=59.4
Q ss_pred hcCCCCCCeEEEE-cc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEEeCCCCCCchHHHHHHHHhC
Q 017052 188 VADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 188 ~~~~~~g~~VLI~-Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
..+.++|++||=. +| |+-...++++.+.-| .+++.+.+++|...+ +++|...++....+...+ ....
T Consensus 111 ~l~~~~g~~vlD~CAapGgKt~~l~~~~~~~~--~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~-----~~~~ 183 (313)
T d1ixka_ 111 ALDPKPGEIVADMAAAPGGKTSYLAQLMRNDG--VIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHI-----GELN 183 (313)
T ss_dssp HHCCCTTCEEEECCSSCSHHHHHHHHHTTTCS--EEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGG-----GGGC
T ss_pred cccCCccceeeecccchhhhhHhhhhhccccc--ceeeeccCHHHHHHHHHHHHHHHhhcccccccccccc-----cccc
Confidence 3468999999887 34 654343333322222 799999999988665 457776655433212111 1123
Q ss_pred CCccEEE-e--ccCCh-------------------------HHHHHHHHHhccCCccEEEe
Q 017052 262 GGADYSF-E--CIGDT-------------------------GMITTALQSCCDGWGLAVTL 294 (378)
Q Consensus 262 ~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~ 294 (378)
+.||.|+ | |+|.. ..+..++++++++ |++|..
T Consensus 184 ~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYs 243 (313)
T d1ixka_ 184 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYS 243 (313)
T ss_dssp CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred ccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEe
Confidence 3788766 5 55532 3466677788886 877655
|
| >d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein TM0922, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=87.12 E-value=3.1 Score=32.75 Aligned_cols=111 Identities=15% Similarity=0.054 Sum_probs=62.8
Q ss_pred hhhhhHHHHHhhcCCCCCCeEEEE-cc---ChHHHHHHHHHHHcCCCeEEEEcCChh-------hHHHHHhCCCcEEeCC
Q 017052 177 GLSAGLGAAWNVADISKGSTVVIF-GL---GTVGLSVAQGAKARGASRIIGVDTNPE-------KCEKAKAFGVTEFLNP 245 (378)
Q Consensus 177 ~~~ta~~al~~~~~~~~g~~VLI~-Ga---g~vG~~aiqla~~~g~~~vi~v~~~~~-------~~~~l~~~g~~~vi~~ 245 (378)
+...++..+.+...-...++|+|. |. |+=|++++..++..|+ +|.++-..++ .....++++...+...
T Consensus 23 Ag~~~a~~i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~-~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (211)
T d2ax3a2 23 AGISVVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVK-DVLVVFLGKKKTPDCEYNYGLYKKFGGKVVEQF 101 (211)
T ss_dssp HHHHHHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSS-EEEEEECCSSCCHHHHHHHHHHHHTTCCEESCC
T ss_pred HHHHHHHHHHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCC-eeEEEecCccCCcHHHHHHHHHHHcCCcccccc
Confidence 333444445455444456678777 54 5677888888888898 6655543222 2233445655443322
Q ss_pred CCCCchHHHHHHHHhCCCccEEEeccCC-------hHHHHHHHHHhccCCccEEEeccCCC
Q 017052 246 NDNNEPVQQVIKRITDGGADYSFECIGD-------TGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-------~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
. ... ...+|+|+|+.=+ ...+...++.++.....++.+..+++
T Consensus 102 ~---~~~--------~~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG 151 (211)
T d2ax3a2 102 E---PSI--------LNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG 151 (211)
T ss_dssp C---GGG--------GGGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred c---ccc--------ccCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence 1 110 1267999998732 13456777777765355777765543
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=87.02 E-value=2.2 Score=32.44 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=43.6
Q ss_pred CCCeEEEEccChHHHHH---HHHHH--HcCCCeEEEEcCChhhHHHH--------HhCCCcEEeCCCCCCchHHHHHHHH
Q 017052 193 KGSTVVIFGLGTVGLSV---AQGAK--ARGASRIIGVDTNPEKCEKA--------KAFGVTEFLNPNDNNEPVQQVIKRI 259 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~a---iqla~--~~g~~~vi~v~~~~~~~~~l--------~~~g~~~vi~~~~~~~~~~~~i~~~ 259 (378)
|+-+|.|+|+|.+|... ..+++ .....+++-++.++++.+.. ..++.+.-+... .+..+.+.
T Consensus 1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~---td~~eaL~-- 75 (171)
T d1obba1 1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT---MNLDDVII-- 75 (171)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE---SCHHHHHT--
T ss_pred CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe---CChhhccc--
Confidence 45688999999888542 22333 22234899999999876532 224443322221 23333332
Q ss_pred hCCCccEEEeccCCh
Q 017052 260 TDGGADYSFECIGDT 274 (378)
Q Consensus 260 ~~~~~d~vid~~g~~ 274 (378)
+.|+|+.+++.+
T Consensus 76 ---dad~Vv~~~~~g 87 (171)
T d1obba1 76 ---DADFVINTAMVG 87 (171)
T ss_dssp ---TCSEEEECCCTT
T ss_pred ---CCCeEeeecccc
Confidence 689999887653
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=86.78 E-value=0.51 Score=40.36 Aligned_cols=33 Identities=18% Similarity=0.405 Sum_probs=29.3
Q ss_pred CCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 193 ~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
.-++|||+|+ |-+|..++..+...|. +|+++++
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~ 48 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN 48 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 3478999998 9999999999999999 8999875
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.77 E-value=0.46 Score=35.76 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=29.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
-+++|+|+|+|.+|.-.+..|...|++.|+.+.+.
T Consensus 44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr 78 (153)
T d1gtea3 44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK 78 (153)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence 46789999999999999999999999778777554
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=86.74 E-value=0.5 Score=37.02 Aligned_cols=39 Identities=28% Similarity=0.359 Sum_probs=33.5
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~ 236 (378)
+|.|+|.|-+|+.++.++ +.|. +|++++.++++.+.+++
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN 40 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence 578889999999887666 4688 99999999999988875
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=86.69 E-value=0.59 Score=38.41 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=30.6
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~ 225 (378)
--.|++|+|.|.|.+|..+++.+...|+ +|+++.
T Consensus 33 ~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs 66 (255)
T d1bgva1 33 TLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS 66 (255)
T ss_dssp CSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence 3578999999999999999999999999 888874
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=86.67 E-value=0.29 Score=41.45 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=29.9
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
-.|+|+|||..|++++..++..|. .+++++.+++
T Consensus 8 ~dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD 41 (298)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence 468999999999999999999999 8999987654
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.56 E-value=0.29 Score=42.02 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=28.9
Q ss_pred CeE-EEEcc-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 195 STV-VIFGL-GTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 195 ~~V-LI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
++| ||+|+ |-+|..++..+...|+ +|+++++..
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~ 35 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS 35 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence 467 99998 8999999999988999 999998854
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=86.50 E-value=0.81 Score=37.93 Aligned_cols=71 Identities=15% Similarity=0.268 Sum_probs=42.3
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCC-CccEEEecc
Q 017052 197 VVIFGL-GTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECI 271 (378)
Q Consensus 197 VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~--~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~-~~d~vid~~ 271 (378)
|||+|+ |-+|..++..+...|..+|++++ .+..+...+.++......+. .+....+.....- ..++++-+.
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~a 76 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK----EDFLIQIMAGEEFGDVEAIFHEG 76 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH----HHHHHHHHTTCCCSSCCEEEECC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc----hHHHHHHhhhhcccchhhhhhhc
Confidence 799988 89999999888888975788885 33334444455544333322 2233333322222 567777554
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=86.38 E-value=0.15 Score=40.62 Aligned_cols=68 Identities=21% Similarity=0.355 Sum_probs=41.3
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~-~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
++|||+|+ |.+|..++..+...|.. +|++..+++.. ....+... ..++.+. .....+..|.|+.|+|
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~~~~---~~d~~~~-~~~~~~~~d~vi~~~g 71 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDNP---VGPLAEL-LPQLDGSIDTAFCCLG 71 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEECC---BSCHHHH-GGGCCSCCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hccccccc---ccchhhh-hhccccchheeeeeee
Confidence 79999998 99999999988887752 56666554311 01111111 1233332 2222336899999987
Q ss_pred C
Q 017052 273 D 273 (378)
Q Consensus 273 ~ 273 (378)
.
T Consensus 72 ~ 72 (212)
T d2a35a1 72 T 72 (212)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=86.11 E-value=0.26 Score=37.91 Aligned_cols=27 Identities=41% Similarity=0.592 Sum_probs=24.7
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGAS 219 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~ 219 (378)
.+++|+|+|+|.+|.-++..++.+|.+
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~ 28 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWE 28 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCc
Confidence 578999999999999999999999984
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.00 E-value=0.38 Score=40.77 Aligned_cols=31 Identities=26% Similarity=0.362 Sum_probs=27.8
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
++|||+|+ |-+|..++..+...|. +|+++++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 68999998 9999999999988998 8999864
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=85.88 E-value=0.32 Score=38.70 Aligned_cols=31 Identities=29% Similarity=0.347 Sum_probs=27.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.|+|+|+|+.|+.++..|..+|. +|+.++..
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~ 35 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR 35 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence 48899999999999999999999 88888764
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=85.74 E-value=0.26 Score=41.08 Aligned_cols=61 Identities=20% Similarity=0.450 Sum_probs=37.1
Q ss_pred eEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 196 ~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
+|||+|+ |-+|..++..+...|. ++++...... + ..|.. +...+.+.++.. ++|+||++.+
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~--~v~~~~~~~~------~----~~Dl~-~~~~~~~~i~~~---~~D~Vih~Aa 63 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN--LIALDVHSKE------F----CGDFS-NPKGVAETVRKL---RPDVIVNAAA 63 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE--EEEECTTCSS------S----CCCTT-CHHHHHHHHHHH---CCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC--EEEEECCCcc------c----cCcCC-CHHHHHHHHHHc---CCCEEEEecc
Confidence 6999998 9999999988777764 5555444321 1 11222 012233333322 7899999886
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=85.73 E-value=4.9 Score=29.14 Aligned_cols=37 Identities=32% Similarity=0.522 Sum_probs=28.6
Q ss_pred eEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhhHH
Q 017052 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCE 232 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~~~ 232 (378)
+|.|+|+|.+|..++..+...+ +++++.++.++++.+
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~ 39 (140)
T d1a5za1 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAE 39 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeccccccc
Confidence 5778899999998887666655 348999998886654
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=85.71 E-value=1.8 Score=32.76 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=58.3
Q ss_pred eEEEEccChHHHHHHHHHHHc-CCCeEEEEcC---ChhhHHHHHhCCCc-------E-------Ee--------CCCC-C
Q 017052 196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGVDT---NPEKCEKAKAFGVT-------E-------FL--------NPND-N 248 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~---~~~~~~~l~~~g~~-------~-------vi--------~~~~-~ 248 (378)
+|-|+|-|-+|+++.+.+... .. +++++-. +.+....+-++-.. . .+ ..++ .
T Consensus 2 kigINGfGRIGR~v~R~~~~~~~~-~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~ 80 (166)
T d2b4ro1 2 KLGINGFGRIGRLVFRAAFGRKDI-EVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS 80 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred eEEEECCCHHHHHHHHHHhhCCCc-EEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence 578999999999999988754 45 6776632 34555555443211 0 11 1110 1
Q ss_pred CchHHHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 249 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+-.|. + .++|+|+||+|.-...+.+...+..+ .+-|.+..+..
T Consensus 81 ~i~W~----~---~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~k 123 (166)
T d2b4ro1 81 QIPWG----K---CQVDVVCESTGVFLTKELASSHLKGG-AKKVIMSAPPK 123 (166)
T ss_dssp GCCHH----H---HTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCS
T ss_pred Hcccc----c---cCCCEEEEecccccchhhhhhhhccC-CCEEEEecccc
Confidence 11231 1 18999999999765666777788875 66666665554
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=85.61 E-value=0.38 Score=36.99 Aligned_cols=30 Identities=27% Similarity=0.325 Sum_probs=26.7
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~ 226 (378)
.|+|+|+|+.|+.++..|...|. +++.+++
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~ 32 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE 32 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence 48899999999999999999999 7888864
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=85.47 E-value=0.32 Score=41.12 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=28.5
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.|+|+|||..|+.++..+...|. +|++++.++
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~ 34 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN 34 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence 58999999999999999988898 899998765
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=85.43 E-value=1.3 Score=35.29 Aligned_cols=91 Identities=23% Similarity=0.305 Sum_probs=58.1
Q ss_pred eEEEEccChHHH-HHHHHHHHc-CCCeEEE-EcCChhhHH-HHHhCCCcE--EeCCCCCCchHHHHHHHHhCC-CccEEE
Q 017052 196 TVVIFGLGTVGL-SVAQGAKAR-GASRIIG-VDTNPEKCE-KAKAFGVTE--FLNPNDNNEPVQQVIKRITDG-GADYSF 268 (378)
Q Consensus 196 ~VLI~Gag~vG~-~aiqla~~~-g~~~vi~-v~~~~~~~~-~l~~~g~~~--vi~~~~~~~~~~~~i~~~~~~-~~d~vi 268 (378)
+|-|+|+|.+|. ..+...+.. +. ++++ +++++++.+ ..+++|.+. +..++ ++ .++... .+|+|+
T Consensus 35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~----d~----~ell~~~~iD~V~ 105 (221)
T d1h6da1 35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYS----NF----DKIAKDPKIDAVY 105 (221)
T ss_dssp EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSS----SG----GGGGGCTTCCEEE
T ss_pred EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccC----ch----hhhcccccceeee
Confidence 678889999986 344444443 66 6664 466776654 456676542 33343 12 222223 799999
Q ss_pred eccCChHHHHHHHHHhccCCccEEEeccC
Q 017052 269 ECIGDTGMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.++........+..++.. |+=+.+..+
T Consensus 106 I~tp~~~H~~~~~~al~~--gk~v~~EKP 132 (221)
T d1h6da1 106 IILPNSLHAEFAIRAFKA--GKHVMCEKP 132 (221)
T ss_dssp ECSCGGGHHHHHHHHHHT--TCEEEECSS
T ss_pred eccchhhhhhHHHHhhhc--chhhhcCCC
Confidence 998877777788888885 676777544
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=85.24 E-value=1.4 Score=31.78 Aligned_cols=60 Identities=22% Similarity=0.230 Sum_probs=47.7
Q ss_pred HhhcCCCCCCeEEEE-ccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCC
Q 017052 186 WNVADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245 (378)
Q Consensus 186 ~~~~~~~~g~~VLI~-Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~ 245 (378)
++.+++..-+.+++. ..-..-+.+.++++.+|..++++...+++..+.++++|++.+++.
T Consensus 58 l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p 118 (132)
T d1lssa_ 58 LEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSP 118 (132)
T ss_dssp HHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECH
T ss_pred hhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECH
Confidence 366777776666554 333456778889999999889999999999999999999998865
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.91 E-value=0.32 Score=36.27 Aligned_cols=90 Identities=13% Similarity=0.163 Sum_probs=50.2
Q ss_pred CeEEEEcc-ChHHHHHHHHHHHcC--CCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEecc
Q 017052 195 STVVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiqla~~~g--~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~ 271 (378)
-+|.|+|| |-+|+-+++++...+ ..++..+.++...-+.+. .........+ +......+.|++|-+.
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~-~~~~~~~~~~---------~~~~~~~~~d~vf~a~ 72 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG-FAESSLRVGD---------VDSFDFSSVGLAFFAA 72 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE-ETTEEEECEE---------GGGCCGGGCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee-eccccchhcc---------chhhhhccceEEEecC
Confidence 46899999 999999999997543 226666655433221111 1111111100 0000111689999998
Q ss_pred CChHHHHHHHHHhccCCccEEEec
Q 017052 272 GDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 272 g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+........-.....+ .++++.+
T Consensus 73 p~~~s~~~~~~~~~~g-~~VID~S 95 (144)
T d2hjsa1 73 AAEVSRAHAERARAAG-CSVIDLS 95 (144)
T ss_dssp CHHHHHHHHHHHHHTT-CEEEETT
T ss_pred CcchhhhhccccccCC-ceEEeec
Confidence 8755555555556654 6666654
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=84.89 E-value=0.41 Score=39.46 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=28.2
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.|+|+|+|.+|++++.-+...|. +|+++++++
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 48999999999999988888898 899998754
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=84.89 E-value=0.69 Score=37.01 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=57.1
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcE--EeCCCCCCchHHHHHHHHhCCCccE
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADY 266 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~--vi~~~~~~~~~~~~i~~~~~~~~d~ 266 (378)
.+..++++||=+|+|. |..+..+++ .|. +|++++.+++..+.+++...+. ++..+ ..++ ..++.||+
T Consensus 16 ~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~--~~~~------~~~~~fD~ 84 (225)
T d2p7ia1 16 TPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSR--FEDA------QLPRRYDN 84 (225)
T ss_dssp GGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESC--GGGC------CCSSCEEE
T ss_pred hhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhccccccccccccc--cccc------cccccccc
Confidence 3445677899998864 666666654 477 8999999999999988743322 22211 1111 01237898
Q ss_pred EEecc-----CCh-HHHHHHH-HHhccCCccEEEe
Q 017052 267 SFECI-----GDT-GMITTAL-QSCCDGWGLAVTL 294 (378)
Q Consensus 267 vid~~-----g~~-~~~~~~~-~~l~~~~G~~v~~ 294 (378)
|+-.- ..+ ..+..+. ++|+++ |.++..
T Consensus 85 I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~ 118 (225)
T d2p7ia1 85 IVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV 118 (225)
T ss_dssp EEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred ccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence 87321 122 2345555 568886 887653
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=84.62 E-value=1 Score=37.48 Aligned_cols=96 Identities=18% Similarity=0.243 Sum_probs=63.9
Q ss_pred cCCCCCCeEEEEccChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHh----CCCcE-EeCCCCCCchHHHHHHHHhC
Q 017052 189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 189 ~~~~~g~~VLI~Gag~vG~~aiqla~~~--g~~~vi~v~~~~~~~~~l~~----~g~~~-vi~~~~~~~~~~~~i~~~~~ 261 (378)
.++.+..+||=+|+| .|..+..+++.. +. +|++++.++...+.+++ .+... .+..+ ...+ . .+
T Consensus 23 ~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d--~~~~-----~-~~ 92 (281)
T d2gh1a1 23 WKITKPVHIVDYGCG-YGYLGLVLMPLLPEGS-KYTGIDSGETLLAEARELFRLLPYDSEFLEGD--ATEI-----E-LN 92 (281)
T ss_dssp SCCCSCCEEEEETCT-TTHHHHHHTTTSCTTC-EEEEEECCHHHHHHHHHHHHSSSSEEEEEESC--TTTC-----C-CS
T ss_pred hccCCcCEEEEecCc-CCHHHHHHHHhCCCCC-EEEEEecchhHhhhhhcccccccccccccccc--cccc-----c-cc
Confidence 356788899999986 478888888875 45 89999999988777764 34332 12111 1111 0 12
Q ss_pred CCccEEEeccC-----C-hHHHHHHHHHhccCCccEEEec
Q 017052 262 GGADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 262 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g 295 (378)
+.+|+|+-.-. . ...+..+.+.|+++ |+++...
T Consensus 93 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~ 131 (281)
T d2gh1a1 93 DKYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE 131 (281)
T ss_dssp SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred CCceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence 37999885421 2 24678889999997 9988764
|
| >d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Homoserine dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.50 E-value=4.6 Score=30.33 Aligned_cols=91 Identities=12% Similarity=0.090 Sum_probs=51.2
Q ss_pred eEEEEccChHHHHHHHHHHHcC--CC-eEEEEcCChhh---------------HHHHHhCCCcEEeCCCCCCchHHHHHH
Q 017052 196 TVVIFGLGTVGLSVAQGAKARG--AS-RIIGVDTNPEK---------------CEKAKAFGVTEFLNPNDNNEPVQQVIK 257 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g--~~-~vi~v~~~~~~---------------~~~l~~~g~~~vi~~~~~~~~~~~~i~ 257 (378)
+|.|.|.|.+|..++++..... .+ +++++..+... .+.+...... .........
T Consensus 6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 77 (168)
T d1ebfa1 6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTK--------TLPLDDLIA 77 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCB--------CCCHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhcccc--------cccHHHHHH
Confidence 5778899999999998877543 21 45555332211 1111111110 111211222
Q ss_pred HHhCC-CccEEEeccCChHHHHHHHHHhccCCccEEEec
Q 017052 258 RITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 258 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 295 (378)
..... ..++++||+++.+......+.+..+ -++|...
T Consensus 78 ~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G-~hVVTAN 115 (168)
T d1ebfa1 78 HLKTSPKPVILVDNTSSAYIAGFYTKFVENG-ISIATPN 115 (168)
T ss_dssp HHTTCSSCEEEEECSCCHHHHTTHHHHHHTT-CEEECCC
T ss_pred HhccCCCceEEEEecCChHHHHHHHHHHHcC-CeEEecC
Confidence 22233 6789999999987776777788875 5666553
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=84.41 E-value=5.9 Score=29.11 Aligned_cols=43 Identities=23% Similarity=0.346 Sum_probs=28.4
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCC
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g 238 (378)
++|-++|.|.+|...+.-+...|. .++.-...++..++.++.+
T Consensus 1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~~~~~~~~~~~~~~~~~ 43 (156)
T d2cvza2 1 EKVAFIGLGAMGYPMAGHLARRFP-TLVWNRTFEKALRHQEEFG 43 (156)
T ss_dssp CCEEEECCSTTHHHHHHHHHTTSC-EEEECSSTHHHHHHHHHHC
T ss_pred CeEEEEeHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHcC
Confidence 468899999999988887776676 5554433444444444443
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=84.41 E-value=2.2 Score=34.65 Aligned_cols=100 Identities=12% Similarity=-0.079 Sum_probs=64.7
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhC-CCcEEeCCCCCCchHHHHHHHH--hCCC
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQVIKRI--TDGG 263 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~-g~~~vi~~~~~~~~~~~~i~~~--~~~~ 263 (378)
+.....++.+||=.|+|. |..+..+|..... .|++++.+++-.+.+++. .....+++. ..+ +.++ .++.
T Consensus 87 ~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~--~~d----~~~~~~~~~~ 158 (254)
T d1xtpa_ 87 ASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFI--LAS----METATLPPNT 158 (254)
T ss_dssp HTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEE--ESC----GGGCCCCSSC
T ss_pred hhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeE--Ecc----ccccccCCCc
Confidence 444556778899888864 8888888877666 899999999998888763 221122111 001 1111 1237
Q ss_pred ccEEEeccC-----Ch---HHHHHHHHHhccCCccEEEec
Q 017052 264 ADYSFECIG-----DT---GMITTALQSCCDGWGLAVTLG 295 (378)
Q Consensus 264 ~d~vid~~g-----~~---~~~~~~~~~l~~~~G~~v~~g 295 (378)
+|+|+-.-. .+ ..+..+.+.|+++ |.++...
T Consensus 159 fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e 197 (254)
T d1xtpa_ 159 YDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE 197 (254)
T ss_dssp EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence 999885432 11 3467788889997 9988754
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=84.22 E-value=3.1 Score=31.87 Aligned_cols=105 Identities=18% Similarity=0.297 Sum_probs=62.5
Q ss_pred hhcCCCCCCeEEEEcc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCcc
Q 017052 187 NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d 265 (378)
....+++|..+ |-+. |.=|+.. .+++. +. +|++++++++..+.+++.-.+.+..+...-.++.+.+..+..+.+|
T Consensus 12 ~~l~~~~g~~~-vD~T~G~GGhs~-~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vd 87 (182)
T d1wg8a2 12 DLLAVRPGGVY-VDATLGGAGHAR-GILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVD 87 (182)
T ss_dssp HHHTCCTTCEE-EETTCTTSHHHH-HHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred HhcCCCCCCEE-EEeCCCCcHHHH-HHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccC
Confidence 33457788864 5444 4445543 33443 55 8999999999988888754333221211144566655555444788
Q ss_pred EEE-eccCCh---------------HHHHHHHHHhccCCccEEEeccC
Q 017052 266 YSF-ECIGDT---------------GMITTALQSCCDGWGLAVTLGVP 297 (378)
Q Consensus 266 ~vi-d~~g~~---------------~~~~~~~~~l~~~~G~~v~~g~~ 297 (378)
.|+ |. |-. ..+......+.++ |+++.+..+
T Consensus 88 gIl~DL-GvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fh 133 (182)
T d1wg8a2 88 GILADL-GVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFH 133 (182)
T ss_dssp EEEEEC-SCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECS
T ss_pred EEEEEc-cCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEecc
Confidence 655 64 321 1356677788886 887776543
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=84.09 E-value=2.6 Score=32.08 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=53.0
Q ss_pred eEEEEccChHHHHHHHHHHHcCCC--eEEEEcC--ChhhHHHHHhCCC-------cE--------EeCCCC----CCchH
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGAS--RIIGVDT--NPEKCEKAKAFGV-------TE--------FLNPND----NNEPV 252 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~--~vi~v~~--~~~~~~~l~~~g~-------~~--------vi~~~~----~~~~~ 252 (378)
+|.|+|-|-+|+++.+.+....-. +++++-. +.+....+-++.. +. +++-.. +..+.
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~p 81 (172)
T d1rm4a1 2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNP 81 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCCh
Confidence 578999999999999977654321 5565532 2233333333211 10 011000 00010
Q ss_pred HHHHHHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 253 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
+.+.+ ..-++|+|+||+|.-...+.+...+..+ .+=|.+..+..
T Consensus 82 -~~i~W-~~~gvDiViEcTG~f~~~~~~~~hl~~G-akkViiSAP~k 125 (172)
T d1rm4a1 82 -VNLPW-GDMGIDLVIEGTGVFVDRDGAGKHLQAG-AKKVLITAPGK 125 (172)
T ss_dssp -GGSCH-HHHTCCEEEECSSSCCBHHHHHHHHHTT-CSCEEESSCCB
T ss_pred -HHCCh-hhcCCCEEEecCceEccHHHHHHHHhcC-CceEEeecccc
Confidence 01100 0117999999999755556677778775 54455544443
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=83.88 E-value=0.42 Score=37.87 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=27.6
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.|+|+|+|+.|+.++..|..+|. +|+.+..+
T Consensus 4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~ 34 (217)
T d1gesa1 4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK 34 (217)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 37889999999999999999999 78888764
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=83.85 E-value=4.3 Score=34.19 Aligned_cols=113 Identities=15% Similarity=0.199 Sum_probs=66.0
Q ss_pred hHHHHHhhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhCCCcEEeCCCC-----------
Q 017052 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNPND----------- 247 (378)
Q Consensus 181 a~~al~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~--~~~~~~~~l~~~g~~~vi~~~~----------- 247 (378)
|++.+.....-.+...|+...+|..|.+++..++..|.+.++.+. .+..|.+.++.+|++.+..-.+
T Consensus 62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~ 141 (331)
T d1tdja1 62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIEL 141 (331)
T ss_dssp HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhh
Confidence 334343333333455566656688999999999999994444442 2557888889999976542211
Q ss_pred ------------CCch-------HHHHHHHHhCCCccEEEeccCChHHHH---HHHHHhccCCccEEEec
Q 017052 248 ------------NNEP-------VQQVIKRITDGGADYSFECIGDTGMIT---TALQSCCDGWGLAVTLG 295 (378)
Q Consensus 248 ------------~~~~-------~~~~i~~~~~~~~d~vid~~g~~~~~~---~~~~~l~~~~G~~v~~g 295 (378)
++.. ....+.+ +.+.+|.||-++|+...+. ..++.+.++ .+++.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~-q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve 209 (331)
T d1tdja1 142 SQQQGFTWVPPFDHPMVIAGQGTLALELLQ-QDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVE 209 (331)
T ss_dssp HHHHCCEECCSSCCHHHHHHHHHHHHHHHH-HCTTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred hhcCCCccccccCChHHhhhhhhHHHHHHH-hcCCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEec
Confidence 0111 1111111 1236899999998765544 344445555 6777764
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=83.70 E-value=0.95 Score=33.80 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=32.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC 231 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~ 231 (378)
|..+|-|+|+|.+|..++.++...+..+++.++.++++.
T Consensus 2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~ 40 (150)
T d1t2da1 2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP 40 (150)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence 456899999999999998888888888999998877654
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=83.68 E-value=0.38 Score=41.17 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=26.1
Q ss_pred eEEEEccChHHHHHHHHHH-----HcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAK-----ARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~-----~~g~~~vi~v~~~~ 228 (378)
.|+|+|+|++|++++.++. ..|. +|+.+++++
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~ 45 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS 45 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence 4899999999999887774 4688 899887754
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=83.61 E-value=0.59 Score=39.17 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=30.2
Q ss_pred CCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc
Q 017052 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225 (378)
Q Consensus 192 ~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~ 225 (378)
-.|++|+|.|.|.+|..+++.+...|+ +|+++.
T Consensus 34 L~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs 66 (293)
T d1hwxa1 34 FGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG 66 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence 368999999999999999999999999 888885
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=83.45 E-value=0.52 Score=39.49 Aligned_cols=32 Identities=34% Similarity=0.524 Sum_probs=26.3
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
+|+|+|+|.+|++++.-+...|.++|++++++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 69999999999988877767786468888765
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.32 E-value=0.41 Score=40.70 Aligned_cols=31 Identities=23% Similarity=0.426 Sum_probs=27.5
Q ss_pred EEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 197 VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
|+|+|+|..|+.++..++..|. +|++++.++
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 7899999999999999999999 899997643
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=83.30 E-value=0.88 Score=33.97 Aligned_cols=48 Identities=17% Similarity=0.034 Sum_probs=38.2
Q ss_pred hhhHHHHHhhcCCCCCCeEEEE--ccChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017052 179 SAGLGAAWNVADISKGSTVVIF--GLGTVGLSVAQGAKARGASRIIGVDTNPE 229 (378)
Q Consensus 179 ~ta~~al~~~~~~~~g~~VLI~--Gag~vG~~aiqla~~~g~~~vi~v~~~~~ 229 (378)
.|..-+| ..+..+++.|+|+ |+|-+|+-+++.+...|. +|+.+.+.+.
T Consensus 26 ~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~~ 75 (156)
T d1djqa2 26 LTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVHL 75 (156)
T ss_dssp ECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSCT
T ss_pred ECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc
Confidence 3555554 3567788999888 668999999999999999 8888877653
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.24 E-value=9.8 Score=31.71 Aligned_cols=108 Identities=27% Similarity=0.238 Sum_probs=65.6
Q ss_pred hhcCCCCCCeEEEE-ccChHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHhCCCcEEeCCC-----------------
Q 017052 187 NVADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNPN----------------- 246 (378)
Q Consensus 187 ~~~~~~~g~~VLI~-Gag~vG~~aiqla~~~g~~~vi~v--~~~~~~~~~l~~~g~~~vi~~~----------------- 246 (378)
+...++.+...+|. .+|..|++++..|+.+|.+-++++ ..++.|.+.++.+|+..+....
T Consensus 57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~ 136 (320)
T d1z7wa1 57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK 136 (320)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence 44456666665665 559999999999999999433433 3356788899999986543110
Q ss_pred ----------CCCch-------HHHHHHHHhCCCccEEEeccCChHHHHH---HHHHhccCCccEEEec
Q 017052 247 ----------DNNEP-------VQQVIKRITDGGADYSFECIGDTGMITT---ALQSCCDGWGLAVTLG 295 (378)
Q Consensus 247 ----------~~~~~-------~~~~i~~~~~~~~d~vid~~g~~~~~~~---~~~~l~~~~G~~v~~g 295 (378)
++... ....+.+...+.+|.++-++|+...+.- .++...+. -+++-+.
T Consensus 137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igve 204 (320)
T d1z7wa1 137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGVE 204 (320)
T ss_dssp CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeeccc
Confidence 01111 1112233333468999999988655443 34445554 6666553
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=83.09 E-value=0.51 Score=37.53 Aligned_cols=31 Identities=29% Similarity=0.319 Sum_probs=28.1
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.|+|+|+|+.|+.++..|..+|. +|+.++..
T Consensus 7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ 37 (220)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence 58899999999999999999999 89988764
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=83.07 E-value=0.68 Score=36.08 Aligned_cols=86 Identities=14% Similarity=0.167 Sum_probs=56.9
Q ss_pred CCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEeccC
Q 017052 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272 (378)
Q Consensus 193 ~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~~g 272 (378)
.+++|.|+|.|.+|..++++++..|. +|++.++..... ...... ..++.+.++ ..|+|.-+..
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~----~~~l~ell~-----~sDii~i~~p 105 (188)
T d1sc6a1 43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQ----VQHLSDLLN-----MSDVVSLHVP 105 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEE----CSCHHHHHH-----HCSEEEECCC
T ss_pred cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhh----hhhHHHHHh-----hccceeeccc
Confidence 57899999999999999999999999 999997653311 011111 123444343 2588776654
Q ss_pred ChH-----HHHHHHHHhccCCccEEEecc
Q 017052 273 DTG-----MITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 273 ~~~-----~~~~~~~~l~~~~G~~v~~g~ 296 (378)
-+. .-.+.++.|+++ ..+|.++-
T Consensus 106 lt~~T~~li~~~~l~~mk~~-a~lIN~aR 133 (188)
T d1sc6a1 106 ENPSTKNMMGAKEISLMKPG-SLLINASR 133 (188)
T ss_dssp SSTTTTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred CCcchhhhccHHHHhhCCCC-CEEEEcCc
Confidence 221 234677888886 77777744
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=82.96 E-value=3 Score=30.56 Aligned_cols=36 Identities=39% Similarity=0.445 Sum_probs=26.8
Q ss_pred CeEEEEccChHHHHHHHHHHHcC-CCeEEEEcCChhh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEK 230 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g-~~~vi~v~~~~~~ 230 (378)
.+|.|+|+|.+|..++..+...+ +.+++.++.++++
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~ 38 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK 38 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence 36888899999999887777765 3479999887765
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=82.77 E-value=0.56 Score=40.09 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=26.4
Q ss_pred CeEEEEccChHHHHHHHHHHHcCC-CeEEEEcCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNP 228 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~-~~vi~v~~~~ 228 (378)
++|+|+|||..|++++..++..|. ..|++..+++
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 689999999999988865554442 2899998875
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=82.54 E-value=2.8 Score=34.68 Aligned_cols=79 Identities=11% Similarity=0.227 Sum_probs=46.5
Q ss_pred hcCCCCCCeEEEE-cc-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhCCCcEEeCCCCCCchHHHHHHHHhC
Q 017052 188 VADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITD 261 (378)
Q Consensus 188 ~~~~~~g~~VLI~-Ga-g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l----~~~g~~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
....++|++||=. +| |+-...++++ +.-..+++++.++.|...+ +.+|...++...+ +.... .....
T Consensus 97 ~L~~~~g~~vLD~CAaPGgKt~~la~l---~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~-~~~~~---~~~~~ 169 (284)
T d1sqga2 97 WLAPQNGEHILDLCAAPGGKTTHILEV---APEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD-GRYPS---QWCGE 169 (284)
T ss_dssp HHCCCTTCEEEEESCTTCHHHHHHHHH---CTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECC-TTCTH---HHHTT
T ss_pred ccCccccceeEeccCccccchhhhhhh---hhhhhhhhhhcchhhhhhHhhhhhcccccceeeecc-ccccc---hhccc
Confidence 3468899999988 44 6655544443 3323899999999997665 4578765432221 11111 11122
Q ss_pred CCccEEE-e--ccCC
Q 017052 262 GGADYSF-E--CIGD 273 (378)
Q Consensus 262 ~~~d~vi-d--~~g~ 273 (378)
+.||.|+ | |+|.
T Consensus 170 ~~fd~IL~DaPCSg~ 184 (284)
T d1sqga2 170 QQFDRILLDAPCSAT 184 (284)
T ss_dssp CCEEEEEEECCCCCG
T ss_pred ccccEEEEecccccc
Confidence 3799766 6 5554
|
| >d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: GroES domain: Chaperonin-10 (GroES) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.54 E-value=1.3 Score=30.38 Aligned_cols=25 Identities=36% Similarity=0.603 Sum_probs=19.7
Q ss_pred ceeEEEEEeCCCCC----------cCCCCCEEEee
Q 017052 70 EASGIVESVGPGVT----------EFNEGEHVLTV 94 (378)
Q Consensus 70 e~~G~V~~vG~~v~----------~~~~Gd~V~~~ 94 (378)
...|+|+++|+... .+++||+|+..
T Consensus 37 ~~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~ 71 (99)
T d1p3ha_ 37 PQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS 71 (99)
T ss_dssp EEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred ceEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence 44699999998642 38899999765
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=82.40 E-value=0.59 Score=36.97 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=27.3
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.|+|+|+|+.|+.++..|...|. +|+.++..
T Consensus 5 DviVIG~GpaGl~aA~~aar~G~-kV~vIEk~ 35 (223)
T d1ebda1 5 ETLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG 35 (223)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 47888999999999999999999 88888654
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=82.16 E-value=1.8 Score=34.44 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=59.5
Q ss_pred CCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC-----h--------hhHHHHHhCCCcEEeCCCCCCchHHHHH
Q 017052 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN-----P--------EKCEKAKAFGVTEFLNPNDNNEPVQQVI 256 (378)
Q Consensus 190 ~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~-----~--------~~~~~l~~~g~~~vi~~~~~~~~~~~~i 256 (378)
.--...+|+++|+|..|...+++....+.++++.+++. . .+.++.+.... .....++.+.+
T Consensus 22 ~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~------~~~~~~l~~~l 95 (222)
T d1vl6a1 22 KKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP------ERLSGDLETAL 95 (222)
T ss_dssp CCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT------TCCCSCHHHHH
T ss_pred CChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhhcc------hhhhcchHhhc
Confidence 34467899999999999999999998898899999875 1 12222222111 11123344333
Q ss_pred HHHhCCCccEEEeccCChHHHHHHHHHhccCCccEEEeccCCC
Q 017052 257 KRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299 (378)
Q Consensus 257 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 299 (378)
. +.++++-.....-..++.+..+++. -.+.-++++..
T Consensus 96 ~-----g~~~~~g~~~~~~~~~e~m~~~~~r-PIIFpLSNPt~ 132 (222)
T d1vl6a1 96 E-----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPVP 132 (222)
T ss_dssp T-----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSSC
T ss_pred c-----CcceeccccccccccHHHHhhcCCC-CEEEecCCCcc
Confidence 2 5677666555433334566667765 66666655543
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=82.14 E-value=1.4 Score=35.48 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=28.9
Q ss_pred CCCCCeEEEEccChHHHHHHHHH-HHcCCCeEEEEc
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGA-KARGASRIIGVD 225 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla-~~~g~~~vi~v~ 225 (378)
--+|++|+|.|.|.+|..+++.+ +..|+ +++++.
T Consensus 28 ~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs 62 (234)
T d1b26a1 28 DPKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS 62 (234)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence 34789999999999999999877 57899 888775
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=82.02 E-value=0.62 Score=38.46 Aligned_cols=31 Identities=23% Similarity=0.490 Sum_probs=27.4
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
.|+|+|+|.+|++++.-+...|. +|++++..
T Consensus 5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~ 35 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF 35 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence 48899999999999988888999 89999764
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.80 E-value=0.6 Score=37.22 Aligned_cols=32 Identities=31% Similarity=0.331 Sum_probs=27.3
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.|+|+|+|+.|+.++..|..+|. +|+.++..+
T Consensus 7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG 38 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence 47889999999999988889999 788887643
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=81.78 E-value=2.1 Score=31.65 Aligned_cols=69 Identities=19% Similarity=0.208 Sum_probs=42.9
Q ss_pred CCCCeEEEEcc--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----CCCcE-EeCCCCCCchHHHHHHHHhCCCc
Q 017052 192 SKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITDGGA 264 (378)
Q Consensus 192 ~~g~~VLI~Ga--g~vG~~aiqla~~~g~~~vi~v~~~~~~~~~l~~----~g~~~-vi~~~~~~~~~~~~i~~~~~~~~ 264 (378)
-.|++||=.++ |.+|+.+ ...|+++|+.++.+++..+.+++ ++... +.... .+..+.+.. ..+.+
T Consensus 13 ~~g~~vlDl~~GtG~~~iea----~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~---~D~~~~l~~-~~~~f 84 (152)
T d2esra1 13 FNGGRVLDLFAGSGGLAIEA----VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAERAIDC-LTGRF 84 (152)
T ss_dssp CCSCEEEEETCTTCHHHHHH----HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHHHHHHH-BCSCE
T ss_pred CCCCeEEEcCCccCHHHHHH----HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc---ccccccccc-ccccc
Confidence 36888888854 5565532 34688899999999988766654 55533 22121 233333433 34489
Q ss_pred cEEE
Q 017052 265 DYSF 268 (378)
Q Consensus 265 d~vi 268 (378)
|+||
T Consensus 85 DiIf 88 (152)
T d2esra1 85 DLVF 88 (152)
T ss_dssp EEEE
T ss_pred ceeE
Confidence 9987
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.40 E-value=1.5 Score=36.10 Aligned_cols=103 Identities=12% Similarity=-0.017 Sum_probs=56.1
Q ss_pred CCCCCeEEEEccChHHHHHHHHHHH----c---CCCeEEEEcCChhhHHHHHhC-C-C---c-EEeCCCCC-CchHHHHH
Q 017052 191 ISKGSTVVIFGLGTVGLSVAQGAKA----R---GASRIIGVDTNPEKCEKAKAF-G-V---T-EFLNPNDN-NEPVQQVI 256 (378)
Q Consensus 191 ~~~g~~VLI~Gag~vG~~aiqla~~----~---g~~~vi~v~~~~~~~~~l~~~-g-~---~-~vi~~~~~-~~~~~~~i 256 (378)
.++.-+||=+|+|. |..+..+++. . +. .+++++.++..++.+++. . . . ..+++... ...+....
T Consensus 38 ~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~-~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T d1jqea_ 38 TKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCI-NNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRM 115 (280)
T ss_dssp TCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEE-EEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHH
T ss_pred CCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCce-EEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchh
Confidence 44455799888742 3333333332 1 23 578999999888877652 1 1 1 11121100 11122222
Q ss_pred HHH-hCCCccEEEeccC-----C-hHHHHHHHHHhccCCccEEEecc
Q 017052 257 KRI-TDGGADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 257 ~~~-~~~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
... ..+.||+|+-.-. . ...+..+.++|+++ |.++....
T Consensus 116 ~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~ 161 (280)
T d1jqea_ 116 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV 161 (280)
T ss_dssp TTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred cccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence 222 2338999885322 2 35788889999997 98876643
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=81.38 E-value=0.66 Score=38.91 Aligned_cols=32 Identities=38% Similarity=0.653 Sum_probs=28.1
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.|||+|+|..|+.++.-|...|+ +|+.++..+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence 58999999999999999999999 899887643
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=81.24 E-value=0.69 Score=36.99 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=28.0
Q ss_pred eEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 196 ~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.|+|+|+|+.|+.++..|..+|. +|+.++..+
T Consensus 8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~ 39 (229)
T d1ojta1 8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK 39 (229)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence 47888999999999999999999 888887644
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=81.20 E-value=0.99 Score=33.54 Aligned_cols=92 Identities=21% Similarity=0.220 Sum_probs=46.0
Q ss_pred CeEEEEcc-ChHHHHHHHH-HHHc--CCCeEEEEcCChhhHHHHHhCCCcEEeCCCCCCchHHHHHHHHhCCCccEEEec
Q 017052 195 STVVIFGL-GTVGLSVAQG-AKAR--GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270 (378)
Q Consensus 195 ~~VLI~Ga-g~vG~~aiql-a~~~--g~~~vi~v~~~~~~~~~l~~~g~~~vi~~~~~~~~~~~~i~~~~~~~~d~vid~ 270 (378)
++|-|+|| |.+|+-++++ +.+. -..+++...++........ ++........ ..+.. .+ .++|++|-|
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~-~~~~~~~~~~--~~~~~-~~-----~~~DivF~a 72 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS-FGGTTGTLQD--AFDLE-AL-----KALDIIVTC 72 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG-GGTCCCBCEE--TTCHH-HH-----HTCSEEEEC
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc-ccCCceeeec--ccchh-hh-----hcCcEEEEe
Confidence 47899999 9999999984 5433 2336666655533221111 1111111110 11111 11 168999999
Q ss_pred cCChHHHHHHHHHhccCC-ccEEEec
Q 017052 271 IGDTGMITTALQSCCDGW-GLAVTLG 295 (378)
Q Consensus 271 ~g~~~~~~~~~~~l~~~~-G~~v~~g 295 (378)
++........-.+...+. ..+++.+
T Consensus 73 ~~~~~s~~~~~~~~~~g~~~~VID~S 98 (146)
T d1t4ba1 73 QGGDYTNEIYPKLRESGWQGYWIDAA 98 (146)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECS
T ss_pred cCchHHHHhhHHHHhcCCCeecccCC
Confidence 987444333334444321 1255543
|
| >d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thermotoga maritima [TaxId: 2336]
Probab=81.04 E-value=7.6 Score=31.93 Aligned_cols=46 Identities=22% Similarity=0.340 Sum_probs=35.4
Q ss_pred EEE-ccChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhCCCcEEe
Q 017052 198 VIF-GLGTVGLSVAQGAKARGASRIIGVDT--NPEKCEKAKAFGVTEFL 243 (378)
Q Consensus 198 LI~-Gag~vG~~aiqla~~~g~~~vi~v~~--~~~~~~~l~~~g~~~vi 243 (378)
+|. .+|..|+++...|+.+|..-++.+.. ++.|.+.++.+|+..+.
T Consensus 58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~ 106 (293)
T d1o58a_ 58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVL 106 (293)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEE
Confidence 444 56999999999999999855555543 56788999999997543
|
| >d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Salmonella typhimurium [TaxId: 90371]
Probab=80.88 E-value=13 Score=30.38 Aligned_cols=56 Identities=23% Similarity=0.245 Sum_probs=40.7
Q ss_pred hhcCCCCCCeEEEEccChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhCCCcEE
Q 017052 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEF 242 (378)
Q Consensus 187 ~~~~~~~g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~--~~~~~~~~l~~~g~~~v 242 (378)
+...+.++..|+..++|..|.+++..|+.+|.+-++.+. .++.+...++.+|+..+
T Consensus 54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~ 111 (302)
T d1fcja_ 54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV 111 (302)
T ss_dssp HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceE
Confidence 444566777666557799999999999999985444443 35567788888888654
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=80.48 E-value=0.76 Score=35.69 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=27.7
Q ss_pred CCeEEEEccChHHHHHHHHHHHcCCCeEEEEcCC
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~ 227 (378)
..+|+|+|+|+.|+.++..|...|. +++.++..
T Consensus 5 ~~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~ 37 (192)
T d1vdca1 5 NTRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW 37 (192)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred cceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence 3579999999999999988888999 77777643
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=80.44 E-value=1.1 Score=31.66 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=26.8
Q ss_pred CCeEEEEccChHHHHHHHHHHHc---CCCeEEEEcCCh
Q 017052 194 GSTVVIFGLGTVGLSVAQGAKAR---GASRIIGVDTNP 228 (378)
Q Consensus 194 g~~VLI~Gag~vG~~aiqla~~~---g~~~vi~v~~~~ 228 (378)
.++++|+|+|.+|.-+++++..+ |. +|..+.+.+
T Consensus 18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~ 54 (117)
T d1feca2 18 PKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD 54 (117)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred CCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence 47999999999999888876654 66 788776653
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=80.30 E-value=2.1 Score=36.90 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=25.0
Q ss_pred CCeEEEEcc-ChHHHHHHH-HHHHcCCCeEEEEc
Q 017052 194 GSTVVIFGL-GTVGLSVAQ-GAKARGASRIIGVD 225 (378)
Q Consensus 194 g~~VLI~Ga-g~vG~~aiq-la~~~g~~~vi~v~ 225 (378)
+-+|||+|+ |-+|..++. |++..|. +|++++
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D 34 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVD 34 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEE
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEe
Confidence 458999998 999988775 5566788 899986
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=80.27 E-value=0.35 Score=39.77 Aligned_cols=99 Identities=15% Similarity=0.088 Sum_probs=61.1
Q ss_pred HHhhcCCCCCCeEEEEccChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHH----hCCCc-E--EeCCCCCCchHHHHH
Q 017052 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAK----AFGVT-E--FLNPNDNNEPVQQVI 256 (378)
Q Consensus 185 l~~~~~~~~g~~VLI~Gag~vG~~aiqla~~~-g~~~vi~v~~~~~~~~~l~----~~g~~-~--vi~~~~~~~~~~~~i 256 (378)
+.....+.+.++||=+|+| .|..++.+++.. +. ++++++.. +..+.++ +.+.. . .+..+ +
T Consensus 72 ~~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~-~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D-----~---- 139 (253)
T d1tw3a2 72 PAAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHV-SATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGD-----F---- 139 (253)
T ss_dssp HHHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTC-EEEEEECT-THHHHHHHHHHHTTCTTTEEEEECC-----T----
T ss_pred HHhhcCCccCCEEEEeCCC-CCHHHHHHHHhccee-EEEEccCH-HHHHHHHHHHHHhhcccchhhcccc-----c----
Confidence 3456677888999999886 477888888877 45 88888863 3333333 33332 1 22111 1
Q ss_pred HHHhCCCccEEEecc-----CCh---HHHHHHHHHhccCCccEEEecc
Q 017052 257 KRITDGGADYSFECI-----GDT---GMITTALQSCCDGWGLAVTLGV 296 (378)
Q Consensus 257 ~~~~~~~~d~vid~~-----g~~---~~~~~~~~~l~~~~G~~v~~g~ 296 (378)
.+..+.++|+|+-.. ..+ ..+..+.+.|+++ |+++....
T Consensus 140 ~~~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~ 186 (253)
T d1tw3a2 140 FEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER 186 (253)
T ss_dssp TSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred hhhcccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence 011123789887331 112 3477888999997 99988753
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.19 E-value=2.1 Score=39.10 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=29.1
Q ss_pred CeEEEEccChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017052 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 228 (378)
Q Consensus 195 ~~VLI~Gag~vG~~aiqla~~~g~~~vi~v~~~~ 228 (378)
.+|+|+|+|++|.-++.-+...|...++.++.+.
T Consensus 26 s~VlvvG~gglG~Ei~knLvl~GVg~itivD~d~ 59 (529)
T d1yova1 26 AHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ 59 (529)
T ss_dssp CEEEECCCSHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred CCEEEECCCHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 5899999999999998888889998888886643
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=80.01 E-value=1.7 Score=33.04 Aligned_cols=73 Identities=12% Similarity=0.085 Sum_probs=42.3
Q ss_pred CCeEEEEccChHHH--HHHHHHHHc-C--CCeEEEEcCChhhHHHH--------HhCCCcEEeCCCCCCchHHHHHHHHh
Q 017052 194 GSTVVIFGLGTVGL--SVAQGAKAR-G--ASRIIGVDTNPEKCEKA--------KAFGVTEFLNPNDNNEPVQQVIKRIT 260 (378)
Q Consensus 194 g~~VLI~Gag~vG~--~aiqla~~~-g--~~~vi~v~~~~~~~~~l--------~~~g~~~vi~~~~~~~~~~~~i~~~~ 260 (378)
.-+|.|+|+|.+|. ++..+++.. . ..+++-++.++++.+.. ...+.+..+... .+..+.++
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~eal~--- 76 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT---TDPEEAFT--- 76 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE---SCHHHHHS---
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec---CChhhccC---
Confidence 34688899876653 333444432 2 23899999999887532 123443322221 13333332
Q ss_pred CCCccEEEeccCCh
Q 017052 261 DGGADYSFECIGDT 274 (378)
Q Consensus 261 ~~~~d~vid~~g~~ 274 (378)
+.|+|+.++|-+
T Consensus 77 --~AD~Vvitag~~ 88 (167)
T d1u8xx1 77 --DVDFVMAHIRVG 88 (167)
T ss_dssp --SCSEEEECCCTT
T ss_pred --CCCEEEECCCcC
Confidence 789999999864
|