Citrus Sinensis ID: 017063
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | ||||||
| 255568301 | 350 | conserved hypothetical protein [Ricinus | 0.912 | 0.985 | 0.688 | 1e-147 | |
| 225446561 | 364 | PREDICTED: uncharacterized protein LOC10 | 0.902 | 0.936 | 0.680 | 1e-147 | |
| 224145260 | 317 | predicted protein [Populus trichocarpa] | 0.820 | 0.977 | 0.773 | 1e-147 | |
| 224135837 | 368 | predicted protein [Populus trichocarpa] | 0.960 | 0.986 | 0.681 | 1e-147 | |
| 449463298 | 371 | PREDICTED: uncharacterized protein LOC10 | 0.849 | 0.865 | 0.738 | 1e-144 | |
| 75860382 | 371 | unknown [Pisum sativum] | 0.851 | 0.867 | 0.727 | 1e-143 | |
| 75860380 | 371 | unknown [Pisum sativum] | 0.851 | 0.867 | 0.727 | 1e-143 | |
| 356543892 | 375 | PREDICTED: uncharacterized protein LOC10 | 0.875 | 0.882 | 0.695 | 1e-141 | |
| 356549862 | 369 | PREDICTED: uncharacterized protein LOC10 | 0.841 | 0.861 | 0.713 | 1e-141 | |
| 18406003 | 367 | protein trichome birefringence-like 39 [ | 0.896 | 0.923 | 0.663 | 1e-139 |
| >gi|255568301|ref|XP_002525125.1| conserved hypothetical protein [Ricinus communis] gi|223535584|gb|EEF37252.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 243/353 (68%), Positives = 293/353 (83%), Gaps = 8/353 (2%)
Query: 29 AKADTFTNNINATTTATENGNDFVPERKSLGGGKCNIFQGKWVYDASYPLYS--HCPFVD 86
KAD + N ++ + + RK KCN F+GKWV+D+SYPLY CPF+D
Sbjct: 3 VKADEYNNGTDSNFLISSRSS-----RKLAANSKCNWFRGKWVFDSSYPLYDPYSCPFLD 57
Query: 87 PEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLA 146
+F+CQ+ GRPD YLKYRWQPFSCS+PRFNGLYFLEK+RGKKIMFVGDSLSLNQWQSL
Sbjct: 58 KQFNCQENGRPDRYYLKYRWQPFSCSLPRFNGLYFLEKWRGKKIMFVGDSLSLNQWQSLT 117
Query: 147 CMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGG 206
CM+HSW P +KYS++R LSS+TF+++G+ ILLYRT +LVD+V AG +L+LDSI GG
Sbjct: 118 CMLHSWVPNSKYSLIRNNGLSSVTFEDYGVTILLYRTPFLVDVVNGKAGRILKLDSIYGG 177
Query: 207 NAWRGMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNV 266
AW GMDMLIFNTWHWWTHTGR+QP+DY++EG KLYKDMNRLVA+YKGLTTWARWVN NV
Sbjct: 178 RAWAGMDMLIFNTWHWWTHTGRTQPWDYMQEGNKLYKDMNRLVAYYKGLTTWARWVNRNV 237
Query: 267 DPTKTKVFFQGISPTHYEGRDWNEPSKSCSGQTKPYFGYKYPAGTPMPWVVLQKVFSRLR 326
DP+KTKVFFQGISPTHYEG+DWNEP++SC+ +T+P+FG +YPAGTP+ WVV+ KV SR++
Sbjct: 238 DPSKTKVFFQGISPTHYEGKDWNEPTRSCAAETQPFFGIRYPAGTPLAWVVVNKVLSRIK 297
Query: 327 KPVYLLDITRLSQYRKDAHPSEYG-GHSDDCSHWCLPGLPDTWNQLMYAALFS 378
KPVYLLD+T LS+YRKDAHPS Y + DCSHWCLPGLPDTWN+L+YAALFS
Sbjct: 298 KPVYLLDVTTLSEYRKDAHPSAYSRDRNTDCSHWCLPGLPDTWNELLYAALFS 350
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446561|ref|XP_002279857.1| PREDICTED: uncharacterized protein LOC100255693 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224145260|ref|XP_002325581.1| predicted protein [Populus trichocarpa] gi|222862456|gb|EEE99962.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224135837|ref|XP_002327316.1| predicted protein [Populus trichocarpa] gi|222835686|gb|EEE74121.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449463298|ref|XP_004149371.1| PREDICTED: uncharacterized protein LOC101205461 [Cucumis sativus] gi|449509085|ref|XP_004163488.1| PREDICTED: uncharacterized protein LOC101226154 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|75860382|gb|ABA29158.1| unknown [Pisum sativum] | Back alignment and taxonomy information |
|---|
| >gi|75860380|gb|ABA29157.1| unknown [Pisum sativum] | Back alignment and taxonomy information |
|---|
| >gi|356543892|ref|XP_003540392.1| PREDICTED: uncharacterized protein LOC100797993 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356549862|ref|XP_003543309.1| PREDICTED: uncharacterized protein LOC100813837 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|18406003|ref|NP_565975.1| protein trichome birefringence-like 39 [Arabidopsis thaliana] gi|4559334|gb|AAD22996.1| expressed protein [Arabidopsis thaliana] gi|14334590|gb|AAK59473.1| unknown protein [Arabidopsis thaliana] gi|17104519|gb|AAL34148.1| unknown protein [Arabidopsis thaliana] gi|330255046|gb|AEC10140.1| protein trichome birefringence-like 39 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 378 | ||||||
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.857 | 0.882 | 0.682 | 6e-135 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.849 | 0.881 | 0.652 | 9.9e-126 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.851 | 0.847 | 0.638 | 5.2e-120 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.846 | 0.831 | 0.617 | 5e-115 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.822 | 0.873 | 0.569 | 1e-98 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.830 | 0.874 | 0.529 | 9.4e-98 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.764 | 0.718 | 0.494 | 2.1e-75 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.764 | 0.726 | 0.452 | 1.6e-70 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.814 | 0.812 | 0.422 | 3.8e-69 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.828 | 0.514 | 0.410 | 2.7e-68 |
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 224/328 (68%), Positives = 267/328 (81%)
Query: 55 RKSLGGGKCNIFQGKWVYDASYPLYS--HCPFVDPEFDCQKYGRPDDIYLKYRWQPFSCS 112
R+ L G+CN F+G WVYD YPLY CPF+DP+F+C+KYGRPD+ YLKYRWQP SCS
Sbjct: 39 RRELASGRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCS 98
Query: 113 IPRFNGLYFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQ 172
+PRFNGLYFL + RGKKIMFVGDSLS N WQSLAC+IHSW P T+Y+++R L+S+TF+
Sbjct: 99 LPRFNGLYFLRRMRGKKIMFVGDSLSTNMWQSLACLIHSWVPNTRYTLIRQKGLASLTFE 158
Query: 173 EFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGGNAWRGMDMLIFNTWHWWTHTGRSQPF 232
E+G+ +LLYRT +LVDL E G VL+LDSIK GN WRGMD+LIFN+WHWWTHT QP+
Sbjct: 159 EYGVTLLLYRTQFLVDLNVEKVGRVLKLDSIKQGNMWRGMDVLIFNSWHWWTHTEHIQPW 218
Query: 233 DYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPTHYEGRDWNEPS 292
DY+ +G +LYKDMNRLVAFYKG+TTWARWVN VDP+KTKVFF G+SPTHYEG+DW EP
Sbjct: 219 DYMEDGNRLYKDMNRLVAFYKGMTTWARWVNAYVDPSKTKVFFNGVSPTHYEGKDWGEPM 278
Query: 293 KSCSGQTKPYFGYKYPAGTPMPWVVLQKVFSRLRKPVYLLDITRLSQYRKDAHPSEYGGH 352
SC QT+P++G KYP GTPM WV+L KV RL+KPV+ LDIT LSQ RKDAHPS + G+
Sbjct: 279 NSCRSQTQPFYGRKYPGGTPMAWVILNKVMRRLKKPVHWLDITGLSQLRKDAHPSAFSGN 338
Query: 353 --SDDCSHWCLPGLPDTWNQLMYAALFS 378
+DCSHWCLPGLPDTWN L Y+ LFS
Sbjct: 339 HPGNDCSHWCLPGLPDTWNLLFYSTLFS 366
|
|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pm.C_LG_XIX0244 | hypothetical protein (317 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 378 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-137 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-103 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 6e-25 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 396 bits (1018), Expect = e-137
Identities = 177/334 (52%), Positives = 214/334 (64%), Gaps = 19/334 (5%)
Query: 63 CNIFQGKWVYDASYPLY--SHCP-FVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGL 119
C +F G WV D SYPLY S CP +DPEF+CQ YGRPD YLKYRWQP +C +PRFNGL
Sbjct: 53 CALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGL 112
Query: 120 YFLEKFRGKKIMFVGDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQIL 179
FL K +GK +MFVGDSL NQW+SL C+I S P T+ + R LS+ F ++G+ I
Sbjct: 113 EFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSIS 172
Query: 180 LYRTTYLVDLVREPAGTVLRLDSIKG-GNAWRGMDMLIFNTWHWWTHTGRSQPFDYIREG 238
Y+ YLVD+ VL+L+ I G NAWR D+LIFNT HWW+H G Q +DYI G
Sbjct: 173 FYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESG 232
Query: 239 RKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPTHYEGRDWN----EPSKS 294
Y+DM+RLVA K L TWA WV+ NVD ++T+VFFQ ISPTHY +W+ +K+
Sbjct: 233 GTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTTKN 292
Query: 295 CSGQTKPYFGYKYPAGTPMPWVVLQKVFSRLRKPVYLLDITRLSQYRKDAHPSEYGG--- 351
C G+T P G YP P V+ +V + P YLLDIT LS+ RKD HPS Y G
Sbjct: 293 CYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLS 352
Query: 352 --------HSDDCSHWCLPGLPDTWNQLMYAALF 377
S DCSHWCLPGLPDTWNQL Y ALF
Sbjct: 353 PSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.92 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.66 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 96.35 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 95.97 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 95.81 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 95.1 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 94.01 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 89.37 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 85.15 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 83.6 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-111 Score=836.94 Aligned_cols=322 Identities=55% Similarity=1.078 Sum_probs=298.6
Q ss_pred CCCCCCCcCccCceeeCCCCCCC--CCCC-CCCCCCccccCCCCCCcccccceecCCCCCCCCChHHHHHHHcCCeEEEE
Q 017063 57 SLGGGKCNIFQGKWVYDASYPLY--SHCP-FVDPEFDCQKYGRPDDIYLKYRWQPFSCSIPRFNGLYFLEKFRGKKIMFV 133 (378)
Q Consensus 57 ~~~~~~Cd~~~G~WV~d~~~plY--~~Cp-~i~~~~~C~~nGRpD~~y~~WrWqP~~C~Lprfd~~~fl~~Lrgk~i~FV 133 (378)
..+.++||+|+|+||+|+++|+| ++|| +|++++||++|||||++|++|||||++|+||||||.+||++|||||||||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 34567899999999999999999 7999 99999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHHHHHhhhccCCCcceeEeecCceeEEEEeecCeEEEEEEeccccccccCCCCceeEecccCCC-CCCCcc
Q 017063 134 GDSLSLNQWQSLACMIHSWAPKTKYSVVRTAVLSSITFQEFGLQILLYRTTYLVDLVREPAGTVLRLDSIKGG-NAWRGM 212 (378)
Q Consensus 134 GDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~~~wspfLv~~~~~~~~~~l~lD~~~~~-~~~~~~ 212 (378)
||||+|||||||+|||++++|...+.+.++++...|+|++||+||+||||||||+.+..+..+.|+||+++.. +.|+++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~ 206 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDA 206 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccC
Confidence 9999999999999999999887665566777889999999999999999999999887766789999999865 889999
Q ss_pred cEEEEcccccccccCCCCCceeeccCceecccccHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCCC-
Q 017063 213 DMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPTHYEGRDWNEP- 291 (378)
Q Consensus 213 DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~VffRt~sP~Hf~~g~W~~~- 291 (378)
|||||||||||.+.+...+++|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+||+||+||..
T Consensus 207 DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg 286 (387)
T PLN02629 207 DVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGA 286 (387)
T ss_pred CEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCC
Confidence 9999999999999888889999999999999999999999999999999999999889999999999999999999942
Q ss_pred ---CCCCCCCcccCcCCCCCCCCCchHHHHHHHHHhcCCCeEEeeccccccccccCCCCCCCC-----------CCCCcc
Q 017063 292 ---SKSCSGQTKPYFGYKYPAGTPMPWVVLQKVFSRLRKPVYLLDITRLSQYRKDAHPSEYGG-----------HSDDCS 357 (378)
Q Consensus 292 ---gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDIt~ls~~R~D~Hp~~y~g-----------~~~DC~ 357 (378)
+|+|+++|+|+.++++.++...+++++++++++++.+|++||||+||++|||||||+|++ .++||+
T Consensus 287 ~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~ 366 (387)
T PLN02629 287 STTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCS 366 (387)
T ss_pred CCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcc
Confidence 257999999999877777667778899999999999999999999999999999999963 368999
Q ss_pred cccCCCchhHHHHHHHHHHhC
Q 017063 358 HWCLPGLPDTWNQLMYAALFS 378 (378)
Q Consensus 358 HWClPGv~D~WN~lL~~~L~~ 378 (378)
||||||||||||||||++|+.
T Consensus 367 HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 367 HWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred cccCCCCCccHHHHHHHHHhC
Confidence 999999999999999999973
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.84 | |
| 3p94_A | 204 | GDSL-like lipase; serine hydrolase, catalytic tria | 93.34 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.00064 Score=59.76 Aligned_cols=121 Identities=11% Similarity=0.067 Sum_probs=70.5
Q ss_pred cccEEEEcccccccccCCCCCceeeccCceecccccHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCC
Q 017063 211 GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPTHYEGRDWNE 290 (378)
Q Consensus 211 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~VffRt~sP~Hf~~g~W~~ 290 (378)
.+|+||++.|..=.. ...+.|++.|+.+++.+.+. .++++|++.+..|.... .+.
T Consensus 74 ~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~--~~~- 128 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTG--EGM- 128 (200)
T ss_dssp CCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEES--GGG-
T ss_pred CCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCccc--ccc-
Confidence 479999999965210 01457888899888888653 35788999999886542 111
Q ss_pred CCCCCCCCcccCcCCCCCCCCCchHHHHHHHHHhcCCCeEEeeccccccccccCCCCCCCCCCCCcccccCCCchhHHHH
Q 017063 291 PSKSCSGQTKPYFGYKYPAGTPMPWVVLQKVFSRLRKPVYLLDITRLSQYRKDAHPSEYGGHSDDCSHWCLPGLPDTWNQ 370 (378)
Q Consensus 291 ~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDIt~ls~~R~D~Hp~~y~g~~~DC~HWClPGv~D~WN~ 370 (378)
....+. .......+++++++.++. .+.++|+.....-+++.. ...|-+|.---| ...|-+
T Consensus 129 ---~~~~~~--------~~~~~~~n~~~~~~a~~~--~v~~iD~~~~~~~~~~~~------~~~Dg~Hpn~~G-y~~~A~ 188 (200)
T 4h08_A 129 ---KEFAPI--------TERLNVRNQIALKHINRA--SIEVNDLWKVVIDHPEYY------AGGDGTHPIDAG-YSALAN 188 (200)
T ss_dssp ---CEECTH--------HHHHHHHHHHHHHHHHHT--TCEEECHHHHHTTCGGGT------TTSCSSSCCHHH-HHHHHH
T ss_pred ---cccchh--------HHHHHHHHHHHHHHhhhc--ceEEEecHHhHhcCHHHh------cCCCCCCCCHHH-HHHHHH
Confidence 000000 000122356666766664 489999987765444322 235888866544 234444
Q ss_pred HHHHHH
Q 017063 371 LMYAAL 376 (378)
Q Consensus 371 lL~~~L 376 (378)
.++..|
T Consensus 189 ~i~~~i 194 (200)
T 4h08_A 189 QVIKVI 194 (200)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
|
| >3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 378 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.75 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.7 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 83.23 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.75 E-value=0.00055 Score=57.55 Aligned_cols=105 Identities=11% Similarity=-0.019 Sum_probs=48.9
Q ss_pred cccEEEEcccccccccCCCCCceeeccCceecccccHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCC
Q 017063 211 GMDMLIFNTWHWWTHTGRSQPFDYIREGRKLYKDMNRLVAFYKGLTTWARWVNFNVDPTKTKVFFQGISPTHYEGRDWNE 290 (378)
Q Consensus 211 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~VffRt~sP~Hf~~g~W~~ 290 (378)
.+|+||+..|.-=..... +...+. .. ....|+..++.+++.+.+. .++..+++-+.-|.....
T Consensus 65 ~~d~Vii~~G~ND~~~~~--~~~~~~-------~~-~~~~~~~~~~~~i~~i~~~--~~~~~ii~~~~~~~~~~~----- 127 (207)
T d3dc7a1 65 DADFIAVFGGVNDYGRDQ--PLGQYG-------DC-DMTTFYGALMMLLTGLQTN--WPTVPKLFISAIHIGSDF----- 127 (207)
T ss_dssp TCSEEEEECCHHHHHTTC--CCCCTT-------CC-STTSHHHHHHHHHHHHHHH--CTTSCEEEEECCCCCSCS-----
T ss_pred CCCEEEEccCchhhhccc--Cccccc-------cc-cHHHHHHHHHHHHHHHHHh--CCceEEEEecCCCCcccc-----
Confidence 479999998864221110 000000 00 1234556666666666553 245677777665544321
Q ss_pred CCCCCCCCcccCcCCCCCCCCCchHHHHHHHHHhcCCCeEEeeccccccc
Q 017063 291 PSKSCSGQTKPYFGYKYPAGTPMPWVVLQKVFSRLRKPVYLLDITRLSQY 340 (378)
Q Consensus 291 ~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~~~~~~~~~v~lLDIt~ls~~ 340 (378)
+... +.............++.++++.++. .+.++|+...+..
T Consensus 128 -~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~--~~~~id~~~~~~~ 169 (207)
T d3dc7a1 128 -GGSF-----SAVTNGLGYRQSDYEAAIAQMTADY--GVPHLSLYRDAGM 169 (207)
T ss_dssp -BTTB-----CSSCCTTSCCHHHHHHHHHHHHHHH--TCCEEEHHHHSSC
T ss_pred -ccch-----hhhhhhHHHHHHHHHHHHHHHHHhc--eeeeeehhhhhhc
Confidence 1111 1000111111112345566666554 4889998765543
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|