Citrus Sinensis ID: 017089

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
Protein Sequence
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Secondary Structure (PSIPRED)
cccccccccEEEEcccccEEEccccccccccccccccccccccccccccccccccccHHHHHccccEEEcccccccccccHHHHHHHHHHHHccccccccccccEEEcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccEEEEEcccccEEEEcccccccccccEEEEccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEEcccHHHHHHHHccccccccEEEcccccEEEEcccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHccEEEEccccccccHHHHHHHHHHHcccccccEEEEcccccccccccHHHHHcccccccccccccccccccccccEEcccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEEcccEEEEEEcccccccEEEEccEEEEccccccccccccccEEcHHHHHcHHHEEEEccEEccEEccHHHHHHHHHHHHHccccccHHHccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHcccccEEEEEEccccEEEEEEEccEEcHHHcEEEcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHcccccccccEEEEcccccEEEEccHHHHcHHHHccHHHHccccccHHHHHHHHHHcccHHHHHHHHccEEEEcHHHccccHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHcHHHHHccEEHHHHHHHcHHHHHHHcc
Coil and Loop (DISEMBL)
madtediqplvcdngtgmvkagfagddapravfpsivgrprhtgvmvgmgqkdayvgdeaqskrgiltlkypiehgivsnwddmEKIWHHTFYNelrvapeehpvllteaplnpkanrEKMTQIMFETFNTPAMYVAIQAVLSLYASGrttgivldsgdgvshtvpiyegyalpHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVeksyelpdgqvitigaerfrcpevlfqpsmigmeaagihettynsimkcdvdirKDLYGNivlsggstmfpgiADRMSKEItalapssmkikvvapperkysVWIGGSILASLSTFQQMWIAKaeydesgpsivhrkcf
Flexible Loop (DISEMBL)
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLteaplnpkanREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILtergysftttaerEIVRDMKEKLAYIALDYEQELETaktssaveksyelpdGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAeydesgpsivhrkcf
Low Complexity Region (SEG)
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Disordered region (IsUnstruct)
*********LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE***********MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELE**********SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY*************
Disordered Region (DISOPRED)
****EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV**GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYE***************YELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Disordered Region (DISEMBL)
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Disordered Region (DISPRO)
******IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	377	2.2.26 [Sep-21-2011]
P30171	377	Actin-97 OS=Solanum tuber	N/A	no	1.0	1.0	0.978	0.0
Q10DV7	377	Actin-1 OS=Oryza sativa s	yes	no	1.0	1.0	0.978	0.0
A2XLF2	377	Actin-1 OS=Oryza sativa s	N/A	no	1.0	1.0	0.978	0.0
O81221	377	Actin OS=Gossypium hirsut	N/A	no	1.0	1.0	0.978	0.0
Q05214	377	Actin OS=Nicotiana tabacu	N/A	no	1.0	1.0	0.976	0.0
P53496	377	Actin-11 OS=Arabidopsis t	yes	no	1.0	1.0	0.970	0.0
P0CJ47	377	Actin-3 OS=Arabidopsis th	yes	no	1.0	1.0	0.968	0.0
P0CJ46	377	Actin-1 OS=Arabidopsis th	yes	no	1.0	1.0	0.968	0.0
P30167	377	Actin-58 OS=Solanum tuber	N/A	no	1.0	1.0	0.968	0.0
P46258	377	Actin-3 OS=Pisum sativum	N/A	no	1.0	1.0	0.970	0.0

>sp|P30171|ACT11_SOLTU Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH+GVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHSGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD+LMKILTERGYSFTT+AEREIVRD+KEKLAYIALDYEQELET+KTSS+VEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.
Solanum tuberosum (taxid: 4113)

>sp|Q10DV7|ACT1_ORYSJ Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 374/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+YIALDY+QE+ETAKTSS+VEK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XLF2|ACT1_ORYSI Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1

 Score =  772 bits (1993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 374/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+YIALDY+QE+ETAKTSS+VEK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Oryza sativa subsp. indica (taxid: 39946)

>sp|O81221|ACT_GOSHI Actin OS=Gossypium hirsutum PE=3 SV=1

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKLAYIALDYEQELET+KTSS++EK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSSIEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.

Gossypium hirsutum (taxid: 3635)

>sp|Q05214|ACT1_TOBAC Actin OS=Nicotiana tabacum PE=3 SV=1

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/377 (97%), Positives = 374/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+YIALD+EQE+ET+KTSS+VEK
Sbjct: 181 DLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFEQEMETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG IV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGKIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Nicotiana tabacum (taxid: 4097)

>sp|P53496|ACT11_ARATH Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/377 (97%), Positives = 373/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKLAYIALDYEQE+ETA TSS+VEK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIG ERFRCPEVLFQPS++GMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins.

Arabidopsis thaliana (taxid: 3702)

>sp|P0CJ47|ACT3_ARATH Actin-3 OS=Arabidopsis thaliana GN=ACT3 PE=1 SV=1

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/377 (96%), Positives = 373/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIG+ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins.

Arabidopsis thaliana (taxid: 3702)

>sp|P0CJ46|ACT1_ARATH Actin-1 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=1

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/377 (96%), Positives = 373/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIG+ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins.

Arabidopsis thaliana (taxid: 3702)

>sp|P30167|ACT3_SOLTU Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/377 (96%), Positives = 374/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA+ EDIQPLVCDNGTGMVKAGFAGDDAPRAVFP IVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAEGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPRIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+YIALD+EQELET+KTSS+VEK
Sbjct: 181 DLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFEQELETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKE+TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKELTALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Solanum tuberosum (taxid: 4113)

>sp|P46258|ACT3_PEA Actin-3 OS=Pisum sativum PE=2 SV=1

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/377 (97%), Positives = 372/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA+ EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAEAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGY+FTT+AEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK
Sbjct: 181 DLAGRDLTDGLMKILTERGYTFTTSAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIGAERFRCPEV  QPSMIGME+ GIHETT+NSIMKCDVDIRKDLYGNIV
Sbjct: 241 TYELPDGQVITIGAERFRCPEVTVQPSMIGMESPGIHETTFNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
300484337	377	actin [Citrus maxima]	1.0	1.0	0.994	0.0
449437577	377	PREDICTED: actin-like [Cucumis sativus]	1.0	1.0	0.992	0.0
356558127	377	PREDICTED: actin-like [Glycine max]	1.0	1.0	0.992	0.0
356550273	377	PREDICTED: actin-97-like [Glycine max]	1.0	1.0	0.992	0.0
224088196	377	actin 3 [Populus trichocarpa] gi|2241378	1.0	1.0	0.992	0.0
333595899	377	actin [Platycodon grandiflorus]	1.0	1.0	0.992	0.0
346683575	377	actin 4 [Mangifera indica]	1.0	1.0	0.992	0.0
255579745	377	actin, putative [Ricinus communis] gi|22	1.0	1.0	0.992	0.0
118481291	377	unknown [Populus trichocarpa]	1.0	1.0	0.989	0.0
225441455	377	PREDICTED: actin [Vitis vinifera] gi|147	1.0	1.0	0.989	0.0

>gi|300484337|gb|ADK20401.1| actin [Citrus maxima]

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/377 (99%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA+ EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAEAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437577|ref|XP_004136568.1| PREDICTED: actin-like [Cucumis sativus] gi|449511328|ref|XP_004163927.1| PREDICTED: actin-like [Cucumis sativus]

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/377 (99%), Positives = 377/377 (100%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD+EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADSEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET+KTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558127|ref|XP_003547359.1| PREDICTED: actin-like [Glycine max]

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/377 (99%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET+KTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550273|ref|XP_003543512.1| PREDICTED: actin-97-like [Glycine max]

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/377 (99%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAY+ALDYEQELET+KTSSAVEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYLALDYEQELETSKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088196|ref|XP_002308365.1| actin 3 [Populus trichocarpa] gi|224137838|ref|XP_002322664.1| actin 7 [Populus trichocarpa] gi|118481698|gb|ABK92789.1| unknown [Populus trichocarpa] gi|118483656|gb|ABK93722.1| unknown [Populus trichocarpa] gi|118487386|gb|ABK95521.1| unknown [Populus trichocarpa] gi|222854341|gb|EEE91888.1| actin 3 [Populus trichocarpa] gi|222867294|gb|EEF04425.1| actin 7 [Populus trichocarpa] gi|301331528|gb|ADK70741.1| actin [Populus tomentosa] gi|301331531|gb|ADK70742.1| actin [Populus tomentosa] gi|301331533|gb|ADK70743.1| actin [Populus tomentosa] gi|301331536|gb|ADK70744.1| actin [Populus tomentosa] gi|301331540|gb|ADK70745.1| actin [Populus tomentosa] gi|301331543|gb|ADK70746.1| actin [Populus tomentosa] gi|301331546|gb|ADK70747.1| actin [Populus tomentosa] gi|301331549|gb|ADK70748.1| actin [Populus tomentosa] gi|301331552|gb|ADK70749.1| actin [Populus tomentosa] gi|301331555|gb|ADK70750.1| actin [Populus tomentosa] gi|301331558|gb|ADK70751.1| actin [Populus tomentosa] gi|301331560|gb|ADK70752.1| actin [Populus tomentosa] gi|301331563|gb|ADK70753.1| actin [Populus tomentosa] gi|301331566|gb|ADK70754.1| actin [Populus tomentosa] gi|301331569|gb|ADK70755.1| actin [Populus tomentosa] gi|301331573|gb|ADK70756.1| actin [Populus tomentosa] gi|301331576|gb|ADK70757.1| actin [Populus tomentosa] gi|301331579|gb|ADK70758.1| actin [Populus tomentosa] gi|301331582|gb|ADK70759.1| actin [Populus tomentosa] gi|301331585|gb|ADK70760.1| actin [Populus tomentosa] gi|301331588|gb|ADK70761.1| actin [Populus tomentosa] gi|301331591|gb|ADK70762.1| actin [Populus tomentosa] gi|301331594|gb|ADK70763.1| actin [Populus tomentosa] gi|301331597|gb|ADK70764.1| actin [Populus tomentosa] gi|301331599|gb|ADK70765.1| actin [Populus tomentosa] gi|301331603|gb|ADK70766.1| actin [Populus tomentosa] gi|301331606|gb|ADK70767.1| actin [Populus tomentosa] gi|301331609|gb|ADK70768.1| actin [Populus tomentosa] gi|301331611|gb|ADK70769.1| actin [Populus tomentosa] gi|301331613|gb|ADK70770.1| actin [Populus tomentosa] gi|301331615|gb|ADK70771.1| actin [Populus tomentosa] gi|301331617|gb|ADK70772.1| actin [Populus tomentosa] gi|301331619|gb|ADK70773.1| actin [Populus tomentosa] gi|301331622|gb|ADK70774.1| actin [Populus tomentosa] gi|301331625|gb|ADK70775.1| actin [Populus tomentosa] gi|301331628|gb|ADK70776.1| actin [Populus tomentosa] gi|301331631|gb|ADK70777.1| actin [Populus tomentosa] gi|301331634|gb|ADK70778.1| actin [Populus tomentosa] gi|301331637|gb|ADK70779.1| actin [Populus tomentosa] gi|301331640|gb|ADK70780.1| actin [Populus tomentosa] gi|301331643|gb|ADK70781.1| actin [Populus tomentosa] gi|429326368|gb|AFZ78524.1| actin [Populus tomentosa]

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/377 (99%), Positives = 377/377 (100%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA++EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAESEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|333595899|gb|AEF58501.1| actin [Platycodon grandiflorus]

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/377 (99%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Platycodon grandiflorus

Species: Platycodon grandiflorus

Genus: Platycodon

Family: Campanulaceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|346683575|gb|AEO45960.1| actin 4 [Mangifera indica]

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/377 (99%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Mangifera indica

Species: Mangifera indica

Genus: Mangifera

Family: Anacardiaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579745|ref|XP_002530711.1| actin, putative [Ricinus communis] gi|223529725|gb|EEF31665.1| actin, putative [Ricinus communis]

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/377 (99%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKL+YIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481291|gb|ABK92589.1| unknown [Populus trichocarpa]

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/377 (98%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD+LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET+KTSSAVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KAEYDESGPSIVHRKCF 377
           KAEYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441455|ref|XP_002279672.1| PREDICTED: actin [Vitis vinifera] gi|147776496|emb|CAN71887.1| hypothetical protein VITISV_040859 [Vitis vinifera]

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/377 (98%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA+TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAETEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 361 KAEYDESGPSIVHRKCF 377
           K EYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
TAIR|locus:2099302	377	ACT11 "AT3G12110" [Arabidopsis	1.0	1.0	0.970	1.4e-197
TAIR|locus:2040656	377	ACT1 "AT2G37620" [Arabidopsis	1.0	1.0	0.968	2.9e-197
TAIR|locus:2084410	377	ACT3 "AT3G53750" [Arabidopsis	1.0	1.0	0.968	2.9e-197
TAIR|locus:2178128	377	ACT7 "actin 7" [Arabidopsis th	1.0	1.0	0.965	7.8e-197
TAIR|locus:2075160	377	ACT12 "AT3G46520" [Arabidopsis	1.0	1.0	0.968	4.3e-196
TAIR|locus:2148298	377	ACT4 "actin 4" [Arabidopsis th	1.0	1.0	0.965	1.1e-195
TAIR|locus:2028416	377	ACT8 "AT1G49240" [Arabidopsis	1.0	1.0	0.920	3.2e-191
TAIR|locus:2093954	377	ACT2 "AT3G18780" [Arabidopsis	1.0	1.0	0.917	8.6e-191
DICTYBASE|DDB_G0289663	376	act5 "actin" [Dictyostelium di	0.994	0.997	0.909	1e-187
DICTYBASE|DDB_G0289553	376	act1 "actin" [Dictyostelium di	0.994	0.997	0.909	1e-187

TAIR|locus:2099302 ACT11 "AT3G12110" [Arabidopsis thaliana (taxid:3702)]

 Score = 1913 (678.5 bits), Expect = 1.4e-197, P = 1.4e-197
 Identities = 366/377 (97%), Positives = 373/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKLAYIALDYEQE+ETA TSS+VEK
Sbjct:   181 DLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             SYELPDGQVITIG ERFRCPEVLFQPS++GMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 SYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KAEYDESGPSIVHRKCF 377
             KAEYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0030036 "actin cytoskeleton organization" evidence=TAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0005856 "cytoskeleton" evidence=ISS

TAIR|locus:2040656 ACT1 "AT2G37620" [Arabidopsis thaliana (taxid:3702)]

 Score = 1910 (677.4 bits), Expect = 2.9e-197, P = 2.9e-197
 Identities = 365/377 (96%), Positives = 373/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELETAKTSS+VEK
Sbjct:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIG+ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KAEYDESGPSIVHRKCF 377
             KAEYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=TAS

GO:0048589 "developmental growth" evidence=IMP

GO:0048767 "root hair elongation" evidence=IMP

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2084410 ACT3 "AT3G53750" [Arabidopsis thaliana (taxid:3702)]

 Score = 1910 (677.4 bits), Expect = 2.9e-197, P = 2.9e-197
 Identities = 365/377 (96%), Positives = 373/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELETAKTSS+VEK
Sbjct:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIG+ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KAEYDESGPSIVHRKCF 377
             KAEYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2178128 ACT7 "actin 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1906 (676.0 bits), Expect = 7.8e-197, P = 7.8e-197
 Identities = 364/377 (96%), Positives = 373/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD+LMKILTERGY FTTTAEREIVRD+KEKLAY+ALDYEQELETAK+SS+VEK
Sbjct:   181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIGAERFRCPEVLFQPS+IGMEA GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query:   361 KAEYDESGPSIVHRKCF 377
             K+EYDESGPSIVHRKCF
Sbjct:   361 KSEYDESGPSIVHRKCF 377

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0007010 "cytoskeleton organization" evidence=RCA;TAS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0048767 "root hair elongation" evidence=RCA;IMP

GO:0051301 "cell division" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005856 "cytoskeleton" evidence=ISS

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

TAIR|locus:2075160 ACT12 "AT3G46520" [Arabidopsis thaliana (taxid:3702)]

 Score = 1899 (673.5 bits), Expect = 4.3e-196, P = 4.3e-196
 Identities = 365/377 (96%), Positives = 371/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+YIALDYEQELET+KTSS+VEK
Sbjct:   181 DLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             S+ELPDGQVITIGAERFRCPEVLFQPSMIGME  GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 SFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMF GI DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KAEYDESGPSIVHRKCF 377
             KAEYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=RCA;TAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

TAIR|locus:2148298 ACT4 "actin 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1895 (672.1 bits), Expect = 1.1e-195, P = 1.1e-195
 Identities = 364/377 (96%), Positives = 371/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+YIALD+EQELET+KTSS+VEK
Sbjct:   181 DLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             S+ELPDGQVITIGAERFRCPEVLFQPSMIGME  GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 SFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMF GI DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KAEYDESGPSIVHRKCF 377
             KAEYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0030036 "actin cytoskeleton organization" evidence=TAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

TAIR|locus:2028416 ACT8 "AT1G49240" [Arabidopsis thaliana (taxid:3702)]

 Score = 1853 (657.3 bits), Expect = 3.2e-191, P = 3.2e-191
 Identities = 347/377 (92%), Positives = 369/377 (97%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD +DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEA
Sbjct:     1 MADADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRL
Sbjct:   121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL+++A+DYEQE+ET+KTSS++EK
Sbjct:   181 DLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMF GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct:   301 LSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query:   361 KAEYDESGPSIVHRKCF 377
             KAEYDE+GP IVHRKCF
Sbjct:   361 KAEYDEAGPGIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2093954 ACT2 "AT3G18780" [Arabidopsis thaliana (taxid:3702)]

 Score = 1849 (655.9 bits), Expect = 8.6e-191, P = 8.6e-191
 Identities = 346/377 (91%), Positives = 369/377 (97%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MA+ +DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEA
Sbjct:     1 MAEADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRL
Sbjct:   121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL+++A+DYEQE+ET+KTSS++EK
Sbjct:   181 DLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMF GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct:   301 LSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query:   361 KAEYDESGPSIVHRKCF 377
             KAEYDE+GP IVHRKCF
Sbjct:   361 KAEYDEAGPGIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS;TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0048767 "root hair elongation" evidence=RCA;IMP

GO:0005634 "nucleus" evidence=IDA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0010114 "response to red light" evidence=IEP

GO:0010218 "response to far red light" evidence=IEP

GO:0016020 "membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0005829 "cytosol" evidence=RCA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010193 "response to ozone" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0016051 "carbohydrate biosynthetic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

DICTYBASE|DDB_G0289663 act5 "actin" [Dictyostelium discoideum (taxid:44689)]

 Score = 1820 (645.7 bits), Expect = 1.0e-187, P = 1.0e-187
 Identities = 341/375 (90%), Positives = 364/375 (97%)

Query:     3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
             D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct:     2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 61

Query:    63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
             KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct:    62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121

Query:   123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
             QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct:   122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 181

Query:   183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
             AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct:   182 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 241

Query:   243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
             ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct:   242 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 301

Query:   303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
             GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct:   302 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 361

Query:   363 EYDESGPSIVHRKCF 377
             EYDESGPSIVHRKCF
Sbjct:   362 EYDESGPSIVHRKCF 376

GO:0006909 "phagocytosis" evidence=IEP

GO:0001891 "phagocytic cup" evidence=IDA

GO:0032010 "phagolysosome" evidence=IDA

GO:0032009 "early phagosome" evidence=IDA

GO:0006972 "hyperosmotic response" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0042331 "phototaxis" evidence=TAS

GO:0016192 "vesicle-mediated transport" evidence=TAS

GO:0006935 "chemotaxis" evidence=TAS

GO:0006928 "cellular component movement" evidence=TAS

GO:0006897 "endocytosis" evidence=TAS

GO:0000910 "cytokinesis" evidence=TAS

GO:0000902 "cell morphogenesis" evidence=TAS

GO:0031252 "cell leading edge" evidence=TAS

GO:0031143 "pseudopodium" evidence=TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0017022 "myosin binding" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0005884 "actin filament" evidence=IDA

GO:0005200 "structural constituent of cytoskeleton" evidence=IDA

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0289553 act1 "actin" [Dictyostelium discoideum (taxid:44689)]

 Score = 1820 (645.7 bits), Expect = 1.0e-187, P = 1.0e-187
 Identities = 341/375 (90%), Positives = 364/375 (97%)

Query:     3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
             D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct:     2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 61

Query:    63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
             KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct:    62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121

Query:   123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
             QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct:   122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 181

Query:   183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
             AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct:   182 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 241

Query:   243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
             ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct:   242 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 301

Query:   303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
             GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct:   302 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 361

Query:   363 EYDESGPSIVHRKCF 377
             EYDESGPSIVHRKCF
Sbjct:   362 EYDESGPSIVHRKCF 376

GO:0006909 "phagocytosis" evidence=IEP

GO:0001891 "phagocytic cup" evidence=IDA

GO:0032010 "phagolysosome" evidence=IDA

GO:0032009 "early phagosome" evidence=IDA

GO:0006972 "hyperosmotic response" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0006897 "endocytosis" evidence=TAS

GO:0000910 "cytokinesis" evidence=TAS

GO:0000902 "cell morphogenesis" evidence=TAS

GO:0042331 "phototaxis" evidence=TAS

GO:0016192 "vesicle-mediated transport" evidence=TAS

GO:0006935 "chemotaxis" evidence=TAS

GO:0006928 "cellular component movement" evidence=TAS

GO:0031252 "cell leading edge" evidence=TAS

GO:0031143 "pseudopodium" evidence=TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005884 "actin filament" evidence=IDA

GO:0005200 "structural constituent of cytoskeleton" evidence=IDA

GO:0017022 "myosin binding" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P84183	ACT4_BOMMO	No assigned EC number	0.9034	0.9893	0.9920	N/A	no
P92179	ACTC_BIOGL	No assigned EC number	0.9034	0.9893	0.9920	N/A	no
P02580	ACT3_SOYBN	No assigned EC number	0.9257	0.9973	1.0	no	no
P0CJ47	ACT3_ARATH	No assigned EC number	0.9681	1.0	1.0	yes	no
P0CJ46	ACT1_ARATH	No assigned EC number	0.9681	1.0	1.0	yes	no
A3C6D7	ACT2_ORYSJ	No assigned EC number	0.9549	1.0	1.0	no	no
Q964E2	ACTC_BIOPF	No assigned EC number	0.9034	0.9893	0.9920	N/A	no
P07829	ACT3_DICDI	No assigned EC number	0.8933	0.9946	0.9973	yes	no
Q964E1	ACTC_BIOOB	No assigned EC number	0.9061	0.9893	0.9920	N/A	no
Q964E0	ACTC_BIOTE	No assigned EC number	0.9061	0.9893	0.9920	N/A	no
P30168	ACT6_SOLTU	No assigned EC number	0.9442	1.0	1.0	N/A	no
O81221	ACT_GOSHI	No assigned EC number	0.9787	1.0	1.0	N/A	no
P30167	ACT3_SOLTU	No assigned EC number	0.9681	1.0	1.0	N/A	no
P30164	ACT1_PEA	No assigned EC number	0.9575	0.9973	1.0	N/A	no
P30165	ACT2_PEA	No assigned EC number	0.9522	0.9973	1.0	N/A	no
P46258	ACT3_PEA	No assigned EC number	0.9708	1.0	1.0	N/A	no
Q05214	ACT1_TOBAC	No assigned EC number	0.9761	1.0	1.0	N/A	no
P02578	ACT1_ACACA	No assigned EC number	0.9061	0.9893	0.9946	N/A	no
P23343	ACT1_DAUCA	No assigned EC number	0.9312	0.9973	0.9894	N/A	no
P84185	ACT5C_ANOGA	No assigned EC number	0.9034	0.9893	0.9920	yes	no
P12716	ACTC_PISOC	No assigned EC number	0.9034	0.9893	0.9920	N/A	no
P0C539	ACT2_ORYSI	No assigned EC number	0.9549	1.0	1.0	N/A	no
P53504	ACT1_SORBI	No assigned EC number	0.9602	1.0	1.0	N/A	no
Q10DV7	ACT1_ORYSJ	No assigned EC number	0.9787	1.0	1.0	yes	no
O65316	ACT_MESVI	No assigned EC number	0.9177	1.0	1.0	N/A	no
P30172	ACT12_SOLTU	No assigned EC number	0.9663	0.9469	1.0	N/A	no
Q553U6	ACT22_DICDI	No assigned EC number	0.904	0.9946	0.9973	yes	no
Q96293	ACT8_ARATH	No assigned EC number	0.9204	1.0	1.0	no	no
Q96292	ACT2_ARATH	No assigned EC number	0.9177	1.0	1.0	no	no
P84184	ACT3B_HELAM	No assigned EC number	0.9034	0.9893	0.9920	N/A	no
Q964E3	ACTC_BIOAL	No assigned EC number	0.9034	0.9893	0.9920	N/A	no
O65315	ACT_COLSC	No assigned EC number	0.9204	1.0	1.0	N/A	no
P20904	ACT_VOLCA	No assigned EC number	0.8965	1.0	1.0	N/A	no
P53498	ACT_CHLRE	No assigned EC number	0.9045	1.0	1.0	N/A	no
P53494	ACT4_ARATH	No assigned EC number	0.9655	1.0	1.0	yes	no
P53497	ACT12_ARATH	No assigned EC number	0.9681	1.0	1.0	yes	no
P53496	ACT11_ARATH	No assigned EC number	0.9708	1.0	1.0	yes	no
P30171	ACT11_SOLTU	No assigned EC number	0.9787	1.0	1.0	N/A	no
P30173	ACT13_SOLTU	No assigned EC number	0.9628	1.0	1.0	N/A	no
P53492	ACT7_ARATH	No assigned EC number	0.9655	1.0	1.0	yes	no
Q54GX7	ACT10_DICDI	No assigned EC number	0.9115	0.9893	0.9920	yes	no
Q10AZ4	ACT3_ORYSJ	No assigned EC number	0.9628	1.0	1.0	yes	no
A2XNS1	ACT3_ORYSI	No assigned EC number	0.9628	1.0	1.0	N/A	no
P0C542	ACT7_ORYSI	No assigned EC number	0.9383	0.9893	0.9920	N/A	no
P0C540	ACT7_ORYSJ	No assigned EC number	0.9383	0.9893	0.9920	no	no
A2XLF2	ACT1_ORYSI	No assigned EC number	0.9787	1.0	1.0	N/A	no
P07830	ACT1_DICDI	No assigned EC number	0.9093	0.9946	0.9973	yes	no
P10987	ACT1_DROME	No assigned EC number	0.9034	0.9893	0.9920	yes	no
P02576	ACTA_PHYPO	No assigned EC number	0.9168	0.9893	0.9920	N/A	no
P53461	ACTC_HALRO	No assigned EC number	0.9034	0.9893	0.9920	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	377
PTZ00281	376	PTZ00281, PTZ00281, actin; Provisional	0.0
PTZ00004	378	PTZ00004, PTZ00004, actin-2; Provisional	0.0
pfam00022	367	pfam00022, Actin, Actin	0.0
smart00268	373	smart00268, ACTIN, Actin	0.0
PTZ00466	380	PTZ00466, PTZ00466, actin-like protein; Provisiona	1e-171
PTZ00452	375	PTZ00452, PTZ00452, actin; Provisional	1e-169
COG5277	444	COG5277, COG5277, Actin and related proteins [Cyto	1e-156
PTZ00280	414	PTZ00280, PTZ00280, Actin-related protein 3; Provi	1e-114
cd00012	185	cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-	1e-16

>gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional

 Score =  730 bits (1885), Expect = 0.0
 Identities = 340/374 (90%), Positives = 363/374 (97%)

Query: 4   TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
            ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSK
Sbjct: 3   GEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK 62

Query: 64  RGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 123
           RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 124 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
           IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLA 182

Query: 184 GRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE 243
           GRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSYE
Sbjct: 183 GRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYE 242

Query: 244 LPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSG 303
           LPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLSG
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSG 302

Query: 304 GSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAE 363
           G+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K E
Sbjct: 303 GTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 362

Query: 364 YDESGPSIVHRKCF 377
           YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376

Length = 376

>gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional

 Score =  672 bits (1735), Expect = 0.0
 Identities = 301/379 (79%), Positives = 339/379 (89%), Gaps = 3/379 (0%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           M+  E+    V DNG+GMVKAGFAGDDAPR VFPSIVGRP++ G+MVGM +KD YVGDEA
Sbjct: 1   MSV-EETNAAVVDNGSGMVKAGFAGDDAPRCVFPSIVGRPKNPGIMVGMEEKDCYVGDEA 59

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           Q KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60  QDKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFET N PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY+LPHAI RL
Sbjct: 120 MTQIMFETHNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYSLPHAIHRL 179

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL-ETAKTSSAVE 239
           D+AGRDLT+ +MKIL ERG +FTTTAE+EIVRD+KEKL YIALD+++E+  +A +S   E
Sbjct: 180 DVAGRDLTEYMMKILHERGTTFTTTAEKEIVRDIKEKLCYIALDFDEEMGNSAGSSDKYE 239

Query: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGM-EAAGIHETTYNSIMKCDVDIRKDLYGN 298
           +SYELPDG +IT+G+ERFRCPE LFQPS+IG  E  GIHE T+ SI KCD+DIRKDLYGN
Sbjct: 240 ESYELPDGTIITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDIDIRKDLYGN 299

Query: 299 IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMW 358
           IVLSGG+TM+ G+ +R++KE+T LAPS+MKIKVVAPPERKYSVWIGGSIL+SL TFQQMW
Sbjct: 300 IVLSGGTTMYRGLPERLTKELTTLAPSTMKIKVVAPPERKYSVWIGGSILSSLPTFQQMW 359

Query: 359 IAKAEYDESGPSIVHRKCF 377
           + K EYDESGPSIVHRKCF
Sbjct: 360 VTKEEYDESGPSIVHRKCF 378

Length = 378

>gnl|CDD|200935 pfam00022, Actin, Actin

 Score =  644 bits (1663), Expect = 0.0
 Identities = 237/374 (63%), Positives = 283/374 (75%), Gaps = 8/374 (2%)

Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +++  LV DNG+G  KAGFAG+DAPRAV PS+VGRPR  GVMV       YVGDEA SKR
Sbjct: 1   DEVSALVIDNGSGTTKAGFAGEDAPRAVIPSVVGRPRGRGVMV-----KYYVGDEALSKR 55

Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
             L ++YPIE GIV NWD MEKIW HTF+ ELRV PEEHP+LLTE PLNP ANREK T+I
Sbjct: 56  PGLEVRYPIEDGIVENWDAMEKIWEHTFFEELRVDPEEHPLLLTEPPLNPPANREKATEI 115

Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETF  PA+Y+A QAVLS YASGRTTG+V+DSG GV+  VP+YEGY L  AI R DLAG
Sbjct: 116 MFETFGVPALYLAKQAVLSAYASGRTTGLVVDSGAGVTSVVPVYEGYVLQKAIRRSDLAG 175

Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
            DLTD L K+L+ R YSF T AE E+VRD+KE L Y++ D   +   +  SS    SYEL
Sbjct: 176 DDLTDYLRKLLSSRTYSFNTYAEEEVVRDIKESLCYVSDDPFGDTAAS--SSPPTVSYEL 233

Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDG VI +G ERFR PE+LF PS+IG E+AGI E  Y+SI  CDVD+R  L  NIV++GG
Sbjct: 234 PDGYVIILGNERFRVPEILFNPSLIGSESAGIPELIYDSINACDVDLRPSLLANIVVTGG 293

Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPP-ERKYSVWIGGSILASLSTFQQMWIAKAE 363
           +T+FPG  +R+ KE+  LAPS +K+K++APP ERKYS WIGGSILASL TFQQMW++K E
Sbjct: 294 TTLFPGFTERLEKELAQLAPSGVKVKIIAPPNERKYSAWIGGSILASLGTFQQMWVSKQE 353

Query: 364 YDESGPSIVHRKCF 377
           Y+E G S+V RKCF
Sbjct: 354 YEEHGSSVVERKCF 367

Length = 367

>gnl|CDD|214592 smart00268, ACTIN, Actin

 Score =  626 bits (1616), Expect = 0.0
 Identities = 250/373 (67%), Positives = 305/373 (81%), Gaps = 4/373 (1%)

Query: 8   QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
             +V DNG+G +KAGFAG+D P+ VFPSIVGRP+    MVG   KD +VGDEAQ KRG L
Sbjct: 2   PAIVIDNGSGTIKAGFAGEDFPQVVFPSIVGRPKDGKGMVG-DAKDIFVGDEAQEKRGGL 60

Query: 68  TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
            LKYPIE+GIV NWDDMEKIW +TF+NELRV PEEHPVLLTE P+NPK+NREK+ +IMFE
Sbjct: 61  ELKYPIENGIVENWDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFE 120

Query: 128 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187
           TFN PA+Y+AIQAVLSLYASGRTTG+V+DSGDGV+H VP+ +GY LPHAI R+D+AGRD+
Sbjct: 121 TFNFPALYIAIQAVLSLYASGRTTGLVIDSGDGVTHVVPVVDGYVLPHAIKRIDIAGRDI 180

Query: 188 TDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKT---SSAVEKSYEL 244
           TD L ++L+ERGY F ++AE EIVR++KEKL Y+A D+E+E++ A+    SS +EK+YEL
Sbjct: 181 TDYLKELLSERGYQFNSSAEFEIVREIKEKLCYVAEDFEKEMKLARESSESSKLEKTYEL 240

Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDG  I +G ERFR PE+LF P +IG+E  GIHE  Y SI KCD+D+RKDLY NIVLSGG
Sbjct: 241 PDGNTIKVGNERFRIPEILFSPELIGLEQKGIHELVYESIQKCDIDVRKDLYENIVLSGG 300

Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           ST+ PG  +R+ KE+  LAP  +K+KV+APPERKYSVW+GGSILASLSTF+ MWI K EY
Sbjct: 301 STLIPGFGERLEKELKQLAPKKLKVKVIAPPERKYSVWLGGSILASLSTFEDMWITKKEY 360

Query: 365 DESGPSIVHRKCF 377
           +ESG  IV RKCF
Sbjct: 361 EESGSQIVERKCF 373

ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily. Length = 373

>gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional

 Score =  481 bits (1239), Expect = e-171
 Identities = 194/370 (52%), Positives = 269/370 (72%), Gaps = 2/370 (0%)

Query: 8   QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
           QP++ DNGTG +KAGFAG+D P  VFPS VGRP++  VM G  + + +VG++A+  RG+L
Sbjct: 13  QPIIIDNGTGYIKAGFAGEDVPNLVFPSYVGRPKYKRVMAGAVEGNIFVGNKAEEYRGLL 72

Query: 68  TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 127
            + YPI HGI+ NW+DME IW H  YN +++  EEHPVLLTEAPLNP+ N+EK+ ++ FE
Sbjct: 73  KVTYPINHGIIENWNDMENIWIHV-YNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFE 131

Query: 128 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187
           TFN PA++++IQA+LSLY+ G+T G VLD GDGV H V IYEGY++ + I R D+AGRD+
Sbjct: 132 TFNVPALFISIQAILSLYSCGKTNGTVLDCGDGVCHCVSIYEGYSITNTITRTDVAGRDI 191

Query: 188 TDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDG 247
           T  L  +L + G+ F T+AE E+V++MKE   Y++ +  +E + +   +     Y LPDG
Sbjct: 192 TTYLGYLLRKNGHLFNTSAEMEVVKNMKENCCYVSFNMNKE-KNSSEKALTTLPYILPDG 250

Query: 248 QVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 307
             I IG+ER+R PEVLF PS++G+E  G+ E    SI + D+D+R+ LY +IVLSGG+TM
Sbjct: 251 SQILIGSERYRAPEVLFNPSILGLEYLGLSELIVTSITRADMDLRRTLYSHIVLSGGTTM 310

Query: 308 FPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDES 367
           F G  DR+  EI   AP  + I++ APPERK+S +IGGSILASL+TF+++WI+K E+DE 
Sbjct: 311 FHGFGDRLLNEIRKFAPKDITIRISAPPERKFSTFIGGSILASLATFKKIWISKQEFDEY 370

Query: 368 GPSIVHRKCF 377
           G  I+HRK F
Sbjct: 371 GSVILHRKTF 380

Length = 380

>gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional

 Score =  476 bits (1225), Expect = e-169
 Identities = 209/368 (56%), Positives = 285/368 (77%)

Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           +V DNG+G  K G AGDDAP + FP+IVGR +    +     K+ YVG+EAQ+KRG+L +
Sbjct: 8   VVIDNGSGYCKIGIAGDDAPTSCFPAIVGRSKQNDGIFSTFNKEYYVGEEAQAKRGVLAI 67

Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           K PI++GI+++WDD+E IWHH FYNEL ++PE+ PV +T+AP+N K NRE+MTQIMFETF
Sbjct: 68  KEPIQNGIINSWDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETF 127

Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           NTP +Y++ +AVLSLY SG+T G+V+DSG+GV+H VP++EG+ +P AI +++LAGR  TD
Sbjct: 128 NTPCLYISNEAVLSLYTSGKTIGLVVDSGEGVTHCVPVFEGHQIPQAITKINLAGRLCTD 187

Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            L +IL E GYS T   +R IV+++KE+L Y ALD + E    K S++ +  Y+LPDG +
Sbjct: 188 YLTQILQELGYSLTEPHQRIIVKNIKERLCYTALDPQDEKRIYKESNSQDSPYKLPDGNI 247

Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           +TI +++FRC E+LFQP +IG+E AGIH   Y+SI KCD+D+R++L  NIVLSGG+T+FP
Sbjct: 248 LTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELCRNIVLSGGTTLFP 307

Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIA+R+S E+T L PS +KI+V APP+R++S WIGGSI  +LST Q  WI + EYDE GP
Sbjct: 308 GIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCTLSTQQPQWIKRQEYDEQGP 367

Query: 370 SIVHRKCF 377
           SIVHRKCF
Sbjct: 368 SIVHRKCF 375

Length = 375

>gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton]

 Score =  447 bits (1152), Expect = e-156
 Identities = 207/443 (46%), Positives = 277/443 (62%), Gaps = 69/443 (15%)

Query: 4   TEDIQP-LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQ 61
           T D  P +V DNG+G  KAGFAG+D P  VFPSIVGR R    VM    +KD YVG+EAQ
Sbjct: 2   TGDNVPTIVIDNGSGTTKAGFAGNDTPTTVFPSIVGRRRDEDSVMEDTEEKDTYVGNEAQ 61

Query: 62  SKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNE--LRVAPEEHPVLLTEAPLNPKAN 117
           + R    L L+YPIE+GI+ NWD ME+IW +TF+N+  L  +PEEHP+LLTE PLNP +N
Sbjct: 62  NDRDNSLLELRYPIENGIILNWDAMEQIWDYTFFNKGDLLPSPEEHPLLLTEPPLNPPSN 121

Query: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--TGIVLDSGDGVSHTVPIYEGYALPH 175
           REK+T+++FET N PA+Y+AIQAVLSLYASG +  TG+V+DSGD V+H +P+ +G  LP 
Sbjct: 122 REKITELLFETLNVPALYLAIQAVLSLYASGSSDETGLVIDSGDSVTHVIPVVDGIVLPK 181

Query: 176 AILRLDLAGRDLTDALMKILTE-----RGYSFTTT---AEREIVRDMKEKL-------AY 220
           A+ R+D+ GRD+TD L K+L E     RGY+  +       EIV ++KE++       AY
Sbjct: 182 AVKRIDIGGRDITDYLKKLLREKYPPSRGYNLKSELVEYSSEIVNEIKEEVCETDDESAY 241

Query: 221 IALDYEQELETAK----------------TSSAVEKSYELPDGQVITIGAE-RFRCPEVL 263
           ++LD E+E E  +                 +S  ++S ELPDG+ I  G E RF+ PE+L
Sbjct: 242 VSLDAEEEFEEEEEKPAEKSTESTFQLSKETSIAKESKELPDGEEIEFGNEERFKAPEIL 301

Query: 264 FQP-----------------------------SMIGMEAAGIHETTYNSIMKCDVDIRKD 294
           F+P                             + +G + AG+ E  Y SI  CD D+RK 
Sbjct: 302 FKPELPISGLEEAGKIDESKQELVAENYEISPTNLGNDIAGLPELVYQSIQICDEDVRKS 361

Query: 295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
           LY NIVL+GG++  PG A+R+ KE+T+LAPS  K+ V+ PP+     W+G SILASL TF
Sbjct: 362 LYSNIVLTGGTSKIPGFAERLQKELTSLAPSIWKVSVIPPPDPSLDAWLGASILASLETF 421

Query: 355 QQMWIAKAEYDESGPSIVHRKCF 377
           QQ+WI K EY+E GP I+  K F
Sbjct: 422 QQLWITKEEYEEHGPDILQEKRF 444

Length = 444

>gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional

 Score =  337 bits (867), Expect = e-114
 Identities = 154/407 (37%), Positives = 217/407 (53%), Gaps = 48/407 (11%)

Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV---GMGQKDAYVGDEAQSKRGI 66
           +V DNGTG  K G+AG+  P  + P+++             G    D Y+GDEA +    
Sbjct: 7   VVIDNGTGYTKMGYAGNTEPTYIIPTLIADNSKQSRRRSKKGFEDLDFYIGDEALAASKS 66

Query: 67  LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
            TL YP++HGIV +WD MEK W    +  LR  PEEH  +LTE P+NP  NRE   +IMF
Sbjct: 67  YTLTYPMKHGIVEDWDLMEKFWEQCIFKYLRCEPEEHYFILTEPPMNPPENREYTAEIMF 126

Query: 127 ETFNTPAMYVAIQAVLSLYAS----------GRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
           ETFN   +Y+A+QAVL+L AS          G  TG V+DSGDGV+H +P+ +GY +  +
Sbjct: 127 ETFNVKGLYIAVQAVLALRASWTSKKAKELGGTLTGTVIDSGDGVTHVIPVVDGYVIGSS 186

Query: 177 ILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET----- 231
           I  + LAGRD+T+ + ++L ERG          + + +KEK  Y+A D  +E E      
Sbjct: 187 IKHIPLAGRDITNFIQQMLRERGEPIPAEDILLLAQRIKEKYCYVAPDIAKEFEKYDSDP 246

Query: 232 -------AKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNS 283
                     +S  +K Y       + +G ERF  PE+ F P +   E    + E   ++
Sbjct: 247 KNHFKKYTAVNSVTKKPYT------VDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDA 300

Query: 284 IMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITA----------------LAPSSM 327
           I  C +D R+ LY NIVLSGGSTMF G   R+ +++                  L P  +
Sbjct: 301 IQSCPIDCRRPLYKNIVLSGGSTMFKGFDKRLQRDVRKRVDRRLKKAEELSGGKLKPIPI 360

Query: 328 KIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
            + VV+ P ++Y+VW GGS+LAS   F+++   KAEYDE GPSI   
Sbjct: 361 DVNVVSHPRQRYAVWYGGSMLASSPEFEKVCHTKAEYDEYGPSICRY 407

Length = 414

>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

 Score = 77.2 bits (190), Expect = 1e-16
 Identities = 44/192 (22%), Positives = 62/192 (32%), Gaps = 53/192 (27%)

Query: 10  LVCDNGTGMVKAGFAGDDA---PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
           L  D G+   KAG A  D    P  + P+ VGRP                          
Sbjct: 1   LGIDIGSTSTKAGVADLDGEILPEEIVPTPVGRP-------------------------- 34

Query: 67  LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-HPVLLTEAPLNPKANREKMTQI- 124
                    G V++ D++E+         LR    E   V +TE    PK NRE +    
Sbjct: 35  ---------GAVTDLDELEEALRELLKEALRQLKSEIDAVGITEPGGVPKENREVIILPN 85

Query: 125 --------MFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGY 171
                     E      + V   AV +  A G       T +V+D G G +    + +G 
Sbjct: 86  LLLIPLALALEDLGGVPVAVVNDAVAAALAEGLFGKEEDTVLVVDLGTGTTGIAIVEDGK 145

Query: 172 ALPHAILRLDLA 183
               A   L +A
Sbjct: 146 GGVGAAGELGIA 157

This superfamily includes the actin family, the HSP70 family of molecular chaperones and nucleotide exchange factors, the ROK (repressor, ORF, kinase) family, the hexokinase family, the FGGY family (which includes glycerol kinase and similar carbohydrate kinases such as rhamnulokinase and xylulokinase), the exopolyphosphatase/guanosine pentaphosphate phosphohydrolase/nucleoside triphosphate diphosphohydrolase family, propionate kinase/acetate kinase family, glycerol dehydratase reactivase, 2-hydroxyglutaryl-CoA dehydratase component A, N-acetylglucosamine kinase, butyrate kinase 2, Escherichia coli YeaZ and similar glycoproteases, the cell shape-determining protein MreB, the plasmid DNA segregation factor ParM, cell cycle proteins FtsA, Pili assembly protein PilM, ethanolamine utilization protein EutJ, and similar proteins. The nucleotide-binding site residues are conserved; the nucleotide sits in a deep cleft formed between the two lobes of the nucleotide-binding domain (NBD). Substrate binding to superfamily members is associated with closure of this catalytic site cleft. The functional activities of several members of the superfamily, including hexokinases, actin, and HSP70s, are modulated by allosteric effectors, which may act on the cleft closure. Length = 185

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	377
PTZ00452	375	actin; Provisional	100.0
PTZ00281	376	actin; Provisional	100.0
PTZ00466	380	actin-like protein; Provisional	100.0
KOG0676	372	consensus Actin and related proteins [Cytoskeleton	100.0
PTZ00004	378	actin-2; Provisional	100.0
PTZ00280	414	Actin-related protein 3; Provisional	100.0
PF00022	393	Actin: Actin; InterPro: IPR004000 Actin [, ] is a	100.0
smart00268	373	ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki	100.0
KOG0679	426	consensus Actin-related protein - Arp4p/Act3p [Cyt	100.0
cd00012	371	ACTIN Actin; An ubiquitous protein involved in the	100.0
KOG0677	389	consensus Actin-related protein Arp2/3 complex, su	100.0
COG5277	444	Actin and related proteins [Cytoskeleton]	100.0
KOG0680	400	consensus Actin-related protein - Arp6p [Cytoskele	100.0
KOG0681	645	consensus Actin-related protein - Arp5p [Cytoskele	100.0
KOG0678	415	consensus Actin-related protein Arp2/3 complex, su	100.0
KOG0797	618	consensus Actin-related protein [Cytoskeleton]	100.0
PRK13930	335	rod shape-determining protein MreB; Provisional	100.0
PRK13927	334	rod shape-determining protein MreB; Provisional	100.0
TIGR00904	333	mreB cell shape determining protein, MreB/Mrl fami	100.0
PRK13929	335	rod-share determining protein MreBH; Provisional	100.0
PF06723	326	MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba	100.0
PRK13928	336	rod shape-determining protein Mbl; Provisional	99.98
COG1077	342	MreB Actin-like ATPase involved in cell morphogene	99.94
TIGR02529	239	EutJ ethanolamine utilization protein EutJ family	99.88
PRK15080	267	ethanolamine utilization protein EutJ; Provisional	99.83
TIGR01991	599	HscA Fe-S protein assembly chaperone HscA. The Hea	99.82
CHL00094	621	dnaK heat shock protein 70	99.82
PTZ00400	663	DnaK-type molecular chaperone; Provisional	99.81
PRK00290	627	dnaK molecular chaperone DnaK; Provisional	99.81
PLN03184	673	chloroplast Hsp70; Provisional	99.8
PRK01433	595	hscA chaperone protein HscA; Provisional	99.8
TIGR02350	595	prok_dnaK chaperone protein DnaK. Members of this	99.8
PRK13410	668	molecular chaperone DnaK; Provisional	99.79
PRK13411	653	molecular chaperone DnaK; Provisional	99.79
PRK05183	616	hscA chaperone protein HscA; Provisional	99.79
PTZ00186	657	heat shock 70 kDa precursor protein; Provisional	99.77
PTZ00009	653	heat shock 70 kDa protein; Provisional	99.77
PRK11678	450	putative chaperone; Provisional	99.68
COG0443	579	DnaK Molecular chaperone [Posttranslational modifi	99.67
PF00012	602	HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho	99.67
PRK09472	420	ftsA cell division protein FtsA; Reviewed	99.62
TIGR01174	371	ftsA cell division protein FtsA. This bacterial ce	99.61
COG0849	418	ftsA Cell division ATPase FtsA [Cell division and	99.57
KOG0100	663	consensus Molecular chaperones GRP78/BiP/KAR2, HSP	99.41
KOG0101	620	consensus Molecular chaperones HSP70/HSC70, HSP70	99.39
TIGR01175	348	pilM type IV pilus assembly protein PilM. This pro	99.27
PRK13917	344	plasmid segregation protein ParM; Provisional	99.25
KOG0104	902	consensus Molecular chaperones GRP170/SIL1, HSP70	99.23
TIGR03739	320	PRTRC_D PRTRC system protein D. A novel genetic sy	99.19
PF11104	340	PilM_2: Type IV pilus assembly protein PilM;; PDB:	99.17
COG4820	277	EutJ Ethanolamine utilization protein, possible ch	99.13
KOG0103	727	consensus Molecular chaperones HSP105/HSP110/SSE1,	99.09
COG4972	354	PilM Tfp pilus assembly protein, ATPase PilM [Cell	98.89
KOG0102	640	consensus Molecular chaperones mortalin/PBP74/GRP7	98.72
PF06406	318	StbA: StbA protein; InterPro: IPR009440 This entry	98.43
PRK10719	475	eutA reactivating factor for ethanolamine ammonia	98.28
TIGR00241	248	CoA_E_activ CoA-substrate-specific enzyme activase	98.27
TIGR03192	293	benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s	98.06
COG1924	396	Activator of 2-hydroxyglutaryl-CoA dehydratase (HS	98.04
TIGR03286	404	methan_mark_15 putative methanogenesis marker prot	97.98
TIGR02261	262	benz_CoA_red_D benzoyl-CoA reductase, bcr type, su	97.92
PF06277	473	EutA: Ethanolamine utilisation protein EutA; Inter	97.58
TIGR02259	432	benz_CoA_red_A benzoyl-CoA reductase, bcr type, su	96.18
PRK11031	496	guanosine pentaphosphate phosphohydrolase; Provisi	95.88
TIGR03706	300	exo_poly_only exopolyphosphatase. It appears that	95.78
PF01869	271	BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In	95.75
PRK13317	277	pantothenate kinase; Provisional	95.57
PF08841	332	DDR: Diol dehydratase reactivase ATPase-like domai	95.52
PRK10854	513	exopolyphosphatase; Provisional	94.65
COG0248	492	GppA Exopolyphosphatase [Nucleotide transport and	94.21
PF14450	120	FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B	94.0
PRK09557	301	fructokinase; Reviewed	93.68
TIGR00744	318	ROK_glcA_fam ROK family protein (putative glucokin	93.59
TIGR00555	279	panK_eukar pantothenate kinase, eukaryotic/staphyl	93.28
COG4819	473	EutA Ethanolamine utilization protein, possible ch	93.23
PF01968	290	Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr	91.52
PF02541	285	Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I	89.88
COG2441	374	Predicted butyrate kinase [Energy production and c	89.74
TIGR03123	318	one_C_unchar_1 probable H4MPT-linked C1 transfer p	87.77
PRK13321	256	pantothenate kinase; Reviewed	86.94
PF03309	206	Pan_kinase: Type III pantothenate kinase; InterPro	86.28
PRK13324	258	pantothenate kinase; Reviewed	85.9
COG1521	251	Pantothenate kinase type III (Bvg accessory factor	85.33
COG1548	330	Predicted transcriptional regulator/sugar kinase [	84.59
PF07318	343	DUF1464: Protein of unknown function (DUF1464); In	84.46
PRK13329	249	pantothenate kinase; Reviewed	80.38

>PTZ00452 actin; Provisional

Probab=100.00  E-value=1.8e-84  Score=614.94  Aligned_cols=371  Identities=56%  Similarity=1.025  Sum_probs=347.5

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHHHHH
Q 017089            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK   86 (377)
Q Consensus         7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~~~   86 (377)
                      .++||||+||+++|+||+|++.|++++||++++++......+....++++|+++...++...+++|+++|.+.|||+++.
T Consensus         5 ~~~vViD~Gs~~~k~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~l~~Pi~~G~I~dwd~~e~   84 (375)
T PTZ00452          5 YPAVVIDNGSGYCKIGIAGDDAPTSCFPAIVGRSKQNDGIFSTFNKEYYVGEEAQAKRGVLAIKEPIQNGIINSWDDIEI   84 (375)
T ss_pred             CCEEEEECCCCeEEEeeCCCCCcCEEecceeEEECCccccccccccceEEChhhhccccCcEEcccCcCCEEcCHHHHHH
Confidence            46899999999999999999999999999999987653222223456789999988788889999999999999999999


Q ss_pred             HHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceEEEE
Q 017089           87 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP  166 (377)
Q Consensus        87 ~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~~  166 (377)
                      +|+|+|.+.|.++++++|+++++|+++++..|+++++++||.+++|++++.+++++++|++|+++|+|||+|++.|+|+|
T Consensus        85 iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~~~~~~lslya~g~~tglVVDiG~~~t~v~P  164 (375)
T PTZ00452         85 IWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYISNEAVLSLYTSGKTIGLVVDSGEGVTHCVP  164 (375)
T ss_pred             HHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCCceEEEechHHHHHHHCCCceeeeecCCCCcceEEE
Confidence            99999988999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCC
Q 017089          167 IYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD  246 (377)
Q Consensus       167 v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~  246 (377)
                      |+||+++.++..++++||++++++|.++|.++++.+....+.+.++++|+++|+++.|++++...........+.|.+||
T Consensus       165 V~dG~~l~~~~~r~~~gG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~y~LPD  244 (375)
T PTZ00452        165 VFEGHQIPQAITKINLAGRLCTDYLTQILQELGYSLTEPHQRIIVKNIKERLCYTALDPQDEKRIYKESNSQDSPYKLPD  244 (375)
T ss_pred             EECCEEeccceEEeeccchHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCcHHHHHHHhhccCCcCceEECCC
Confidence            99999999999999999999999999999988888877777889999999999999999887765544344567899999


Q ss_pred             CcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCC
Q 017089          247 GQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSS  326 (377)
Q Consensus       247 ~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~  326 (377)
                      |+.+.++.+||.++|+||+|++.+.+..||+++|.++|.+||+|.|+.|++||||+||+|++|||.+||++||++++|..
T Consensus       245 g~~i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~  324 (375)
T PTZ00452        245 GNILTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELCRNIVLSGGTTLFPGIANRLSNELTNLVPSQ  324 (375)
T ss_pred             CCEEEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHhHHHHhhccEEEecccccccCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       327 ~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      .++++..++++.+++|+|||++|++++|++.||||+||+|+|+++++||||
T Consensus       325 ~~v~v~~~~~r~~~aW~GgSilasl~~f~~~~vtk~eYeE~G~~i~~~k~~  375 (375)
T PTZ00452        325 LKIQVAAPPDRRFSAWIGGSIQCTLSTQQPQWIKRQEYDEQGPSIVHRKCF  375 (375)
T ss_pred             ceeEEecCCCcceeEEECchhhcCccchhhhEeEHHHHhccCcceeeeecC
Confidence            899999999999999999999999999999999999999999999999997

>PTZ00281 actin; Provisional

Probab=100.00  E-value=3.4e-84  Score=614.83  Aligned_cols=376  Identities=91%  Similarity=1.411  Sum_probs=353.4

Q ss_pred             CCCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCH
Q 017089            2 ADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNW   81 (377)
Q Consensus         2 ~~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~   81 (377)
                      |.+|+.++||||+||+++|+||+||+.|++++||+++++++...+.+.++.+.++|+++...+....+++|+++|.+.||
T Consensus         1 ~~~~~~~~vViD~Gs~~~k~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~Pi~~G~i~dw   80 (376)
T PTZ00281          1 MDGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW   80 (376)
T ss_pred             CCCCcCCeEEEECCCCeEEEeeCCCCCCCeeccccceeecCcccccCcccCCeEECchhhccccCcEEeccCcCCEEcCH
Confidence            56788899999999999999999999999999999999877655444445678899998877777889999999999999


Q ss_pred             HHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCc
Q 017089           82 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  161 (377)
Q Consensus        82 ~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~  161 (377)
                      ++++.+|+|+|.+.|.++++++|+++++|+++++..|+++++++||.++++++++.+++++++|++|++||+|||+|++.
T Consensus        81 d~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp~~~~~~~~~ls~ya~g~~tglVVDiG~~~  160 (376)
T PTZ00281         81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV  160 (376)
T ss_pred             HHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCceeEeeccHHHHHHhcCCceEEEEECCCce
Confidence            99999999999888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceE
Q 017089          162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS  241 (377)
Q Consensus       162 t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~  241 (377)
                      |+|+||+||+++.++..++++||++++++|+++|.++++++....+.+.++++|+++|+|+.+++.+++.........+.
T Consensus       161 t~v~PV~dG~~~~~~~~~~~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~  240 (376)
T PTZ00281        161 SHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKS  240 (376)
T ss_pred             EEEEEEEecccchhheeeccCcHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhcEEecCCchHHHHhhhcCccccee
Confidence            99999999999999999999999999999999999888888777778899999999999999988777655444456778


Q ss_pred             EEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHh
Q 017089          242 YELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITA  321 (377)
Q Consensus       242 ~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~  321 (377)
                      |.+|||+.+.++.+|+.++|+||+|++.+.+..+|+++|.++|.+||.|.|+.|++||||+||+|++|||.+||++||+.
T Consensus       241 y~LPdg~~i~i~~er~~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~El~~  320 (376)
T PTZ00281        241 YELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTA  320 (376)
T ss_pred             EECCCCCEEEeeHHHeeCcccccChhhcCCCCCCHHHHHHHHHHhCChhHHHHHHhhccccCccccCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999899999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       322 ~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ++|...+++++.+++|++++|+|||++|++++|++.||||+||+|+|+++++||||
T Consensus       321 ~~p~~~~v~v~~~~~r~~~aW~Ggsilasl~~f~~~~vtk~eY~E~G~~~~~~k~~  376 (376)
T PTZ00281        321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF  376 (376)
T ss_pred             hCCCCcceEEecCCCCceeEEECcccccCcccHhhceeeHHHHhhhCchheeeecC
Confidence            99988899999999999999999999999999999999999999999999999997

>PTZ00466 actin-like protein; Provisional

Probab=100.00  E-value=2.4e-83  Score=607.70  Aligned_cols=370  Identities=52%  Similarity=0.969  Sum_probs=346.4

Q ss_pred             CCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHHHH
Q 017089            6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDME   85 (377)
Q Consensus         6 ~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~~   85 (377)
                      +.++||||+||+++|+||+|++.|++++||++++++....+.+....+.++|+++...++...+++|+++|.+.|||+++
T Consensus        11 ~~~~iViD~GS~~~K~G~ag~~~P~~~~ps~vg~~k~~~~~~~~~~~~~~vG~~~~~~~~~~~l~~Pi~~G~v~dwd~~e   90 (380)
T PTZ00466         11 SNQPIIIDNGTGYIKAGFAGEDVPNLVFPSYVGRPKYKRVMAGAVEGNIFVGNKAEEYRGLLKVTYPINHGIIENWNDME   90 (380)
T ss_pred             cCCeEEEECCCCcEEEeeCCCCCCCEeccceeeeecCccccccCCCCCeEECchhhhhCcCceeCccccCCeECCHHHHH
Confidence            45689999999999999999999999999999999876554444456789999988777778899999999999999999


Q ss_pred             HHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceEEE
Q 017089           86 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV  165 (377)
Q Consensus        86 ~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~  165 (377)
                      .+|+|+| +.|++.++++|+++++++++++..|+++++++||.+++|++++.++++||+|++|.++|+|||+|++.|+|+
T Consensus        91 ~iw~~~f-~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p~~~~~~~~~lsl~a~g~~tglVVD~G~~~t~v~  169 (380)
T PTZ00466         91 NIWIHVY-NSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVPALFISIQAILSLYSCGKTNGTVLDCGDGVCHCV  169 (380)
T ss_pred             HHHHHHH-hhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCCCeEEEecchHHHHHhcCCceEEEEeCCCCceEEE
Confidence            9999998 889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC
Q 017089          166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP  245 (377)
Q Consensus       166 ~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p  245 (377)
                      ||+||+++.++..++++||++++++|.++|.+++..+....+.+.++++|+++|+|+.|+.++..... .......|.+|
T Consensus       170 PV~~G~~~~~~~~~~~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~v~~iKe~~c~v~~d~~~e~~~~~-~~~~~~~y~LP  248 (380)
T PTZ00466        170 SIYEGYSITNTITRTDVAGRDITTYLGYLLRKNGHLFNTSAEMEVVKNMKENCCYVSFNMNKEKNSSE-KALTTLPYILP  248 (380)
T ss_pred             EEECCEEeecceeEecCchhHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhCeEecCChHHHHhhcc-ccccceeEECC
Confidence            99999999999999999999999999999998888777777889999999999999999887765432 22345789999


Q ss_pred             CCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCC
Q 017089          246 DGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS  325 (377)
Q Consensus       246 ~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~  325 (377)
                      ||..+.++.+||.++|+||+|++++.+..+|+++|.++|.+||.|.|+.|++||||+||+|++|||.+||++||+.+.|.
T Consensus       249 dg~~i~l~~er~~~~E~LF~P~~~g~~~~gl~~~i~~sI~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~EL~~l~p~  328 (380)
T PTZ00466        249 DGSQILIGSERYRAPEVLFNPSILGLEYLGLSELIVTSITRADMDLRRTLYSHIVLSGGTTMFHGFGDRLLNEIRKFAPK  328 (380)
T ss_pred             CCcEEEEchHHhcCcccccCccccCCCCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCccccCCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          326 SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       326 ~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ..++++..+++|++++|+|||++|++++|++.||||+||+|+|+++++||||
T Consensus       329 ~~~v~v~~~~~r~~~aW~GgSilasl~~f~~~~itk~eYeE~G~~iv~rk~~  380 (380)
T PTZ00466        329 DITIRISAPPERKFSTFIGGSILASLATFKKIWISKQEFDEYGSVILHRKTF  380 (380)
T ss_pred             CceEEEecCCCCceeEEECchhhcCccchhhhEeEHHHHhhhCcHhheeecC
Confidence            8899999999999999999999999999999999999999999999999997

>KOG0676 consensus Actin and related proteins [Cytoskeleton]

Probab=100.00  E-value=1.5e-83  Score=588.52  Aligned_cols=369  Identities=81%  Similarity=1.312  Sum_probs=351.3

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHH
Q 017089            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         4 ~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~   83 (377)
                      ..+.++||||+||..+|+||+||+.|+.++||.+++|++..++.++.+.+.++|+++...+   .+++|+++|.+.||++
T Consensus         4 ~~~~~~vViDnGsg~~KaGfag~~~P~~v~ps~vg~~~~~~~~~~~~~~~~~vg~~a~~~~---~l~~Pie~Giv~~wd~   80 (372)
T KOG0676|consen    4 ADDIQAVVIDNGSGFVKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMTQKDTYVGDEAESKR---TLKYPIERGIVTDWDD   80 (372)
T ss_pred             cCCcceEEEECCCceeecccCCCCCCceecceeccccccccccccccccccccchhhhccc---cccCccccccccchHH
Confidence            4456999999999999999999999999999999999999998888889999999998877   6799999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceE
Q 017089           84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH  163 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~  163 (377)
                      ++.+|.|+|+..|.+.|+++|+++++|+++++..|+++++++||.|++|++++...+++  |++|+++|+|||+|++.|.
T Consensus        81 me~iw~~if~~~L~~~Pee~pvllte~pl~p~~nREk~tqi~FE~fnvpa~yva~qavl--ya~g~ttG~VvD~G~gvt~  158 (372)
T KOG0676|consen   81 MEKIWHHLFYSELLVAPEEHPVLLTEPPLNPKANREKLTQIMFETFNVPALYVAIQAVL--YASGRTTGLVVDSGDGVTH  158 (372)
T ss_pred             HHHHHHHHHHHhhccCcccCceEeecCCCCchHhHHHHHHHhhhhcCccHhHHHHHHHH--HHcCCeeEEEEEcCCCcee
Confidence            99999999999999999999999999999999999999999999999999999554444  9999999999999999999


Q ss_pred             EEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEE
Q 017089          164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE  243 (377)
Q Consensus       164 i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~  243 (377)
                      ++||++|++++++...+++||++++++++..|.++++.+....+.++++++|+++||++.|+++++............|+
T Consensus       159 ~vPI~eG~~lp~ai~~ldl~G~dlt~~l~~~L~~~g~s~~~~~~~eIv~diKeklCyvald~~~e~~~~~~~~~l~~~y~  238 (372)
T KOG0676|consen  159 VVPIYEGYALPHAILRLDLAGRDLTDYLLKQLRKRGYSFTTSAEFEIVRDIKEKLCYVALDFEEEEETANTSSSLESSYE  238 (372)
T ss_pred             eeecccccccchhhheecccchhhHHHHHHHHHhcccccccccHHHHHHHhHhhhcccccccchhhhccccccccccccc
Confidence            99999999999999999999999999999999999999998889999999999999999999999887444555667799


Q ss_pred             cCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhC
Q 017089          244 LPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA  323 (377)
Q Consensus       244 ~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~  323 (377)
                      +|||+.+.++++||.++|+||+|+.++.+..+|++++.++|.+|++|.|+.|+.||||+||++.+|||.+||++|++.+.
T Consensus       239 lPDg~~i~i~~erf~~pE~lFqP~~~g~e~~gi~~~~~~sI~kcd~dlrk~L~~nivLsGGtT~~pGl~~Rl~kEl~~l~  318 (372)
T KOG0676|consen  239 LPDGQKITIGNERFRCPEVLFQPSLLGMESPGIHELTVNSIMKCDIDLRKDLYENIVLSGGTTMFPGLADRLQKELQALA  318 (372)
T ss_pred             CCCCCEEecCCcccccchhcCChhhcCCCCCchhHHHHHHHHhCChhHhHHHHhheEEeCCcccchhHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      |...+++|+.+|++.+++|+||||+|++..|++.||||+||+|+|+.+++||||
T Consensus       319 P~~~~ikv~~pp~r~~s~WlGgSIlaslstfq~~witk~eY~e~g~~~~~rk~f  372 (372)
T KOG0676|consen  319 PSTIKIKVIAPPERKYSAWLGGSILASLSTFQQMWITKEEYEEHGPSIIHRKCF  372 (372)
T ss_pred             CCCcceEEecCcccccceecCceeEeecchHhhccccHHHHhhhCCceeeeccC
Confidence            999999999999999999999999999999999999999999999999999998

>PTZ00004 actin-2; Provisional

Probab=100.00  E-value=9.9e-82  Score=598.84  Aligned_cols=376  Identities=80%  Similarity=1.295  Sum_probs=350.4

Q ss_pred             CCCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCH
Q 017089            2 ADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNW   81 (377)
Q Consensus         2 ~~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~   81 (377)
                      |+-++.++||||+||+++|+||+|++.|++++||+++++++...+.+..++..++|+++...++...+++|+++|.+.||
T Consensus         1 ~~~~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~Pi~~G~i~d~   80 (378)
T PTZ00004          1 MSVEETNAAVVDNGSGMVKAGFAGDDAPRCVFPSIVGRPKNPGIMVGMEEKDCYVGDEAQDKRGILTLKYPIEHGIVTNW   80 (378)
T ss_pred             CCCCCCCeEEEECCCCeEEEeeCCCCCCCEEccceeEEecccccccCcCCCceEECchhhcccccceEcccCcCCEEcCH
Confidence            46678889999999999999999999999999999999887655444445678899998777677889999999999999


Q ss_pred             HHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCc
Q 017089           82 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  161 (377)
Q Consensus        82 ~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~  161 (377)
                      ++++.+|+|+|.+.|+..+.++|+++++|+++++..|+++++++||.++++++++.+++++|+|++|.+||+|||+|++.
T Consensus        81 d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g~~tglVVDiG~~~  160 (378)
T PTZ00004         81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  160 (378)
T ss_pred             HHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCceEEeeccHHHHHHhcCCceEEEEECCCCc
Confidence            99999999999888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCC-Ccce
Q 017089          162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS-AVEK  240 (377)
Q Consensus       162 t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~-~~~~  240 (377)
                      |+|+||+||+++.++..++++||++++++|.++|.++++.+....+.+.++++|+++|+|+.|++++........ ....
T Consensus       161 t~v~pV~dG~~l~~~~~~~~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~  240 (378)
T PTZ00004        161 SHTVPIYEGYSLPHAIHRLDVAGRDLTEYMMKILHERGTTFTTTAEKEIVRDIKEKLCYIALDFDEEMGNSAGSSDKYEE  240 (378)
T ss_pred             EEEEEEECCEEeecceeeecccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHhhcceeecCCHHHHHhhhhcCccccce
Confidence            999999999999999999999999999999999999888877767788999999999999999988776443222 2467


Q ss_pred             EEEcCCCcEEeeCCccccccccCCCCccCCCc-CCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHH
Q 017089          241 SYELPDGQVITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI  319 (377)
Q Consensus       241 ~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~-~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL  319 (377)
                      .|.+|||..+.++.+|+.++|+||+|++++.+ ..+|+++|.++|.+||+|.|+.|++||||+||+|++|||.+||++||
T Consensus       241 ~y~lPdg~~i~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~EL  320 (378)
T PTZ00004        241 SYELPDGTIITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDIDIRKDLYGNIVLSGGTTMYRGLPERLTKEL  320 (378)
T ss_pred             EEECCCCCEEEEcHHHeeCcccccChhhcCccccCChHHHHHHHHHhCChhHHHHHHhhEEeccchhcCcCHHHHHHHHH
Confidence            89999999999999999999999999998887 89999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          320 TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       320 ~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ++++|...++++..+++|.+++|+|||++|++.+|++.||||+||+|+|++++.||||
T Consensus       321 ~~~~p~~~~~~v~~~~~~~~~aW~Ggsilas~~~f~~~~vtk~eYeE~G~~~~~rk~~  378 (378)
T PTZ00004        321 TTLAPSTMKIKVVAPPERKYSVWIGGSILSSLPTFQQMWVTKEEYDESGPSIVHRKCF  378 (378)
T ss_pred             HHhCCCCccEEEecCCCCceeEEECcccccCccchhhhEeEHHHHhhhCcceEEeecC
Confidence            9999988889999999999999999999999999999999999999999999999997

>PTZ00280 Actin-related protein 3; Provisional

Probab=100.00  E-value=1.4e-75  Score=563.57  Aligned_cols=370  Identities=41%  Similarity=0.750  Sum_probs=332.6

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcc---ccCCCcceeeccchhcccCcceeeccccCCccCCHHH
Q 017089            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM---VGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~---~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~   83 (377)
                      .++||||+||+++|+||+|++.|++++||++++++.....   .+....++++|+++........+++|+++|.+.|||+
T Consensus         4 ~~~iViD~GS~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~l~~Pi~~G~I~dwd~   83 (414)
T PTZ00280          4 LPVVVIDNGTGYTKMGYAGNTEPTYIIPTLIADNSKQSRRRSKKGFEDLDFYIGDEALAASKSYTLTYPMKHGIVEDWDL   83 (414)
T ss_pred             CCeEEEECCCCceEeeeCCCCCCCEEecceeEEeccccccccccccccCCEEEcchhhhCcCCcEEecCccCCEeCCHHH
Confidence            5689999999999999999999999999999987653211   1112336789999988877889999999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccccccc----------CCceEE
Q 017089           84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS----------GRTTGI  153 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~----------g~~~~l  153 (377)
                      ++.+|+|+|.+.|++++.++|+++++|++++...|+++++++||.++++++++.++++||+|++          |.++|+
T Consensus        84 ~e~l~~~~~~~~L~~~p~~~~vllte~~~~~~~~Re~l~e~lFE~~~~p~i~~~~~~~lslya~~~~~~~~~~~g~~tgl  163 (414)
T PTZ00280         84 MEKFWEQCIFKYLRCEPEEHYFILTEPPMNPPENREYTAEIMFETFNVKGLYIAVQAVLALRASWTSKKAKELGGTLTGT  163 (414)
T ss_pred             HHHHHHHHHHHhhccCCCCCceEEeeCCCCcHHHHHHHHHHHhhccCCCeEEEecCHHHhHhhhcccccccccCCceeEE
Confidence            9999999988889999999999999999999999999999999999999999999999999999          999999


Q ss_pred             EEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhc
Q 017089          154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAK  233 (377)
Q Consensus       154 VVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~  233 (377)
                      |||+|++.|+|+||++|.++.++..++++||++++++|.++|.+++..+....+.+.++++|+++|++..|+.++.....
T Consensus       164 VVDiG~~~T~i~PV~~G~~l~~~~~~~~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~e~~~~~  243 (414)
T PTZ00280        164 VIDSGDGVTHVIPVVDGYVIGSSIKHIPLAGRDITNFIQQMLRERGEPIPAEDILLLAQRIKEKYCYVAPDIAKEFEKYD  243 (414)
T ss_pred             EEECCCCceEEEEEECCEEcccceEEecCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHhcCcccCcHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998888777666678999999999999999888776543


Q ss_pred             cC-CCcceEEEcCCC---c--EEeeCCccccccccCCCCccCCCc-CCChHHHHHHHHhcCCHHHHHHhhcCcccccCCc
Q 017089          234 TS-SAVEKSYELPDG---Q--VITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGST  306 (377)
Q Consensus       234 ~~-~~~~~~~~~p~~---~--~i~i~~~~~~~~E~lf~p~~~~~~-~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s  306 (377)
                      .. ......|.+||.   .  .+.++.+||.++|+||+|++++.. ..+|+++|.++|++||+|.|+.|++||+|+||+|
T Consensus       244 ~~~~~~~~~~~~~d~~~g~~~~i~l~~erf~~~E~LF~P~~~~~~~~~gl~e~i~~sI~~~~~d~r~~L~~nIvL~GG~s  323 (414)
T PTZ00280        244 SDPKNHFKKYTAVNSVTKKPYTVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAIQSCPIDCRRPLYKNIVLSGGST  323 (414)
T ss_pred             cCcccccceEECCCCCCCCccEEEechHHhcCcccccChhhcCCccCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCcc
Confidence            22 223456888873   3  789999999999999999887544 4599999999999999999999999999999999


Q ss_pred             CCcChHHHHHHHHHhhC----------------CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCc
Q 017089          307 MFPGIADRMSKEITALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPS  370 (377)
Q Consensus       307 ~i~gl~~rl~~eL~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~  370 (377)
                      ++|||.+||++||++++                |...+++|..++++.+++|+|||++|++++|+++||||+||+|+|++
T Consensus       324 ~~~Gf~eRL~~El~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~GgSilas~~~f~~~~itk~eY~E~G~~  403 (414)
T PTZ00280        324 MFKGFDKRLQRDVRKRVDRRLKKAEELSGGKLKPIPIDVNVVSHPRQRYAVWYGGSMLASSPEFEKVCHTKAEYDEYGPS  403 (414)
T ss_pred             cCcCHHHHHHHHHHHhccccccccccccccccCCCCceEEEecCCccceeEEEChhhcccCcchhhheEEHHHHhccChH
Confidence            99999999999999986                34567899999999999999999999999999999999999999999


Q ss_pred             cccccc
Q 017089          371 IVHRKC  376 (377)
Q Consensus       371 ~~~~k~  376 (377)
                      +++++.
T Consensus       404 i~~~~~  409 (414)
T PTZ00280        404 ICRYNN  409 (414)
T ss_pred             heeecc
Confidence            998873

>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton

Probab=100.00  E-value=3.6e-76  Score=566.95  Aligned_cols=368  Identities=51%  Similarity=0.972  Sum_probs=323.8

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHH
Q 017089            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         4 ~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~   83 (377)
                      +|+.++||||+||.+||+||+||+.|++++|++++++.....     ..++++|++.........+++|+++|.+.||+.
T Consensus         1 ~d~~~~vViD~Gs~~~k~G~age~~P~~v~ps~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~~~   75 (393)
T PF00022_consen    1 GDENKPVVIDNGSSTIKAGFAGEDLPRVVIPSVVGRPRDKNS-----SNDYYVGDEALSPRSNLELRSPIENGVIVDWDA   75 (393)
T ss_dssp             -TSSSEEEEEECSSEEEEEETTSSS-SEEEESEEEEESSSSS-----SSSCEETHHHHHTGTGEEEEESEETTEESSHHH
T ss_pred             CCCCCEEEEECCCceEEEEECCCCCCCCcCCCcccccccccc-----ceeEEeecccccchhheeeeeeccccccccccc
Confidence            478999999999999999999999999999999998876542     125788988766667778999999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceE
Q 017089           84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH  163 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~  163 (377)
                      ++.+|+++|.+.|..+++++++++++|+++++..|+.+++++||++++++++++++++||+|++|.++|||||+|++.|+
T Consensus        76 ~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~~~v~~~~~~~~a~~~~g~~tglVVD~G~~~t~  155 (393)
T PF00022_consen   76 LEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGVPSVYFIPSPLLALYASGRTTGLVVDIGYSSTS  155 (393)
T ss_dssp             HHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--SEEEEEEHHHHHHHHTTBSSEEEEEESSS-EE
T ss_pred             cccccccccccccccccccceeeeeccccCCchhhhhhhhhhhcccccceeeeeecccccccccccccccccccceeeee
Confidence            99999999987899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCC-----------------ccchhHHHHHHHHHHhccceecCHH
Q 017089          164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYS-----------------FTTTAEREIVRDMKEKLAYIALDYE  226 (377)
Q Consensus       164 i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~-----------------~~~~~~~~~~~~ik~~~~~v~~~~~  226 (377)
                      |+||+||+++.++.+++++||++++++|.++|.+++..                 +....+...++++|+++|+++.+..
T Consensus       156 v~pV~dG~~~~~~~~~~~~GG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~  235 (393)
T PF00022_consen  156 VVPVVDGYVLPHSIKRSPIGGDDLTEYLKELLKERNIQINPSYLIKSKSPVEGESYNNSDDEEIVEEIKEECCYVSEDPD  235 (393)
T ss_dssp             EEEEETTEE-GGGBEEES-SHHHHHHHHHHHHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHHHHHHHHHHHSGGSSHH
T ss_pred             eeeeeeccccccccccccccHHHHHHHHHHHHHhhccccccccccccccccccccccchhhhccchhccchhhhcccccc
Confidence            99999999999999999999999999999999987433                 2233457889999999999999887


Q ss_pred             HHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCC-------ChHHHHHHHHhcCCHHHHHHhhcCc
Q 017089          227 QELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAA-------GIHETTYNSIMKCDVDIRKDLYGNI  299 (377)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~-------~l~~~I~~~i~~~~~~~~~~l~~nI  299 (377)
                      ... ...........|.+|||+.+.++.+|+.++|+||+|+..+.+..       +|+++|.++|++||++.|+.|++||
T Consensus       236 ~~~-~~~~~~~~~~~~~lPdg~~i~~~~er~~~~E~LF~p~~~~~~~~~~~~~~~gL~~~I~~si~~~~~d~r~~l~~nI  314 (393)
T PF00022_consen  236 EEQ-EEQASENPEKSYELPDGQTIILGKERFRIPEILFNPSLIGIDSASEPSEFMGLPELILDSISKCPIDLRKELLSNI  314 (393)
T ss_dssp             HHH-HHHHCSTTTEEEE-TTSSEEEESTHHHHHHHTTTSGGGGTSSSTS---SSSCHHHHHHHHHHTSTTTTHHHHHTTE
T ss_pred             ccc-ccccccccceecccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccccccccccccce
Confidence            511 11112456788999999999999999999999999999887766       9999999999999999999999999


Q ss_pred             ccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCC-CCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP-ERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       300 il~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~-~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      |||||+|++|||.+||++||..+.|...++++..++ +|.+++|+|||++|++.+|+++||||+||+|+|+++++||||
T Consensus       315 vl~GG~S~i~G~~eRL~~eL~~~~~~~~~~~v~~~~~~~~~~aW~Ggsilasl~~f~~~~itr~eYeE~G~~~i~rkc~  393 (393)
T PF00022_consen  315 VLTGGSSLIPGFKERLQQELRSLLPSSTKVKVIAPPSDRQFAAWIGGSILASLSSFQSFWITREEYEEYGPSIIHRKCF  393 (393)
T ss_dssp             EEESGGGGSTTHHHHHHHHHHHHSGTTSTEEEE--T-TTTSHHHHHHHHHHTSGGGGGTSEEHHHHHHHGGGGHHHHT-
T ss_pred             EEecccccccchHHHHHHHhhhhhhccccceeccCchhhhhcccccceeeeccccccceeeeHHHHhCcCcceeeecCC
Confidence            999999999999999999999999888899999999 999999999999999999999999999999999999999998

These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....

>smart00268 ACTIN Actin

Probab=100.00  E-value=1.1e-74  Score=552.26  Aligned_cols=369  Identities=68%  Similarity=1.182  Sum_probs=340.0

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHHHHHH
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKI   87 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~~~~   87 (377)
                      ++||||+||++||+||++++.|++++||+++++++.....+ ....+++|+++....+...+++|+++|.+.||+.++.+
T Consensus         2 ~~iviD~Gs~~~k~G~~~~~~P~~~~ps~v~~~~~~~~~~~-~~~~~~~G~~a~~~~~~~~~~~P~~~G~i~d~~~~e~i   80 (373)
T smart00268        2 PAIVIDNGSGTIKAGFAGEDEPQVVFPSIVGRPKDGKGMVG-DAKDTFVGDEAQEKRGGLELKYPIEHGIVENWDDMEKI   80 (373)
T ss_pred             CeEEEECCCCcEEEeeCCCCCCcEEccceeeEecccccccC-CCcceEecchhhhcCCCceecCCCcCCEEeCHHHHHHH
Confidence            58999999999999999999999999999998865432111 23467899998776666689999999999999999999


Q ss_pred             HHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceEEEEe
Q 017089           88 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI  167 (377)
Q Consensus        88 ~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~~v  167 (377)
                      |+++|.+.|+..++++|+++++|..++...|+.+++++||.++++++++++++++|+|++|.++|+|||+|++.|+|+||
T Consensus        81 ~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~pv  160 (373)
T smart00268       81 WDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNFPALYIAIQAVLSLYASGRTTGLVIDSGDGVTHVVPV  160 (373)
T ss_pred             HHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCCCeEEEeccHHHHHHhCCCCEEEEEecCCCcceEEEE
Confidence            99999778999899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhcc---CCCcceEEEc
Q 017089          168 YEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKT---SSAVEKSYEL  244 (377)
Q Consensus       168 ~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~  244 (377)
                      +||.++.++.+++++||++++++|.++|++++..+....+.+.++++|+++|+++.+++++++....   .......|.+
T Consensus       161 ~~G~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l  240 (373)
T smart00268      161 VDGYVLPHAIKRIDIAGRDLTDYLKELLSERGYQFNSSAEFEIVREIKEKLCYVAEDFEKEMKKARESSESSKLEKTYEL  240 (373)
T ss_pred             ECCEEchhhheeccCcHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHhhhheeeecCChHHHHHHhhhcccccccceeEEC
Confidence            9999999999999999999999999999886666655667789999999999999998877765432   2445678999


Q ss_pred             CCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCC
Q 017089          245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAP  324 (377)
Q Consensus       245 p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~  324 (377)
                      |||..+.++.+|+.++|+||+|+..+.+..+|+++|.++|.+||.+.|+.+++||+||||+|++|||.+||++||+.+.|
T Consensus       241 pdg~~~~~~~er~~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p  320 (373)
T smart00268      241 PDGNTIKVGNERFRIPEILFKPELIGLEQKGIHELVYESIQKCDIDVRKDLYENIVLSGGSTLIPGFGERLEKELKQLAP  320 (373)
T ss_pred             CCCCEEEEChHHeeCchhcCCchhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCeEeecccccCcCHHHHHHHHHHHhCC
Confidence            99999999999999999999999998889999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          325 SSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       325 ~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ...++++..++++.+++|.|||++|++++|++.||||+||+|+|+++++||||
T Consensus       321 ~~~~v~v~~~~~~~~~~W~G~silas~~~f~~~~vtk~eY~E~G~~i~~~k~~  373 (373)
T smart00268      321 KKLKVKVIAPPERKYSVWLGGSILASLSTFEDMWITKKEYEEHGSQIVERKCF  373 (373)
T ss_pred             CCceeEEecCCCCccceEeCcccccCccchhhhEEEHHHHhhhCcceEEeecC
Confidence            88889999999999999999999999999999999999999999999999998

ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily

>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton]

Probab=100.00  E-value=3.1e-75  Score=518.37  Aligned_cols=369  Identities=40%  Similarity=0.753  Sum_probs=320.5

Q ss_pred             CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhc-ccCcceeeccccCCccCCH
Q 017089            3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNW   81 (377)
Q Consensus         3 ~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~-~~~~~~~~~p~~~g~i~d~   81 (377)
                      -+++..+||||+||++||+||||++.|++++|+.++.....+.-. .+...++++.++.. ++....++.|+++|.+.||
T Consensus         7 ggdEv~alViDpGS~~traGyaged~Pk~ilPS~~G~~tk~~~d~-~~~~~~y~~~~ai~~pr~gmEv~~~i~nGlv~dW   85 (426)
T KOG0679|consen    7 GGDEVSALVIDPGSHTTRAGYAGEDSPKAILPSVYGKVTKTDGDA-EDKKGYYVDENAIHVPRPGMEVKTPIKNGLVEDW   85 (426)
T ss_pred             cccccceEEEeCCCceEeccccCCCCccccccceeeeeecccCcc-ccccceEeechhccCCCCCCeeccchhcCCcccH
Confidence            478899999999999999999999999999999998532221101 12334688888755 4677889999999999999


Q ss_pred             HHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCc
Q 017089           82 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  161 (377)
Q Consensus        82 ~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~  161 (377)
                      |.++.+|+|.|.++|+.+|.++|+++++|+.++++.|++++|.+||++++|+++++..++|++|++|+.|+||||||+++
T Consensus        86 D~~~~~w~~~~~~~Lk~~p~ehP~litEp~wN~~~~Rek~~ElmFE~~nvPAf~L~k~~v~~AFA~GrstalVvDiGa~~  165 (426)
T KOG0679|consen   86 DLFEMQWRYAYKNQLKVNPEEHPVLITEPPWNTRANREKLTELMFEKLNVPAFYLAKTAVCTAFANGRSTALVVDIGATH  165 (426)
T ss_pred             HHHHHHHHHHHhhhhhcCccccceeeecCCCCcHHHHHHHHHHHHhhcCCceEEEechHHHHHHhcCCCceEEEEecCCC
Confidence            99999999999889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchh---------------------------------HH
Q 017089          162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTA---------------------------------ER  208 (377)
Q Consensus       162 t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~---------------------------------~~  208 (377)
                      |+|+||+||+++.+++++.++||++|+..++++|..+++++....                                 ..
T Consensus       166 ~svsPV~DG~Vlqk~vvks~laGdFl~~~~~q~l~~~~iei~P~y~ia~k~~v~~g~~an~~~~~~~~d~tes~~~y~~~  245 (426)
T KOG0679|consen  166 TSVSPVHDGYVLQKGVVKSPLAGDFLNDQCRQLLEPKNIEIIPMYNIASKEPVREGYPANAVLRVSIPDLTESYHNYMEQ  245 (426)
T ss_pred             ceeeeeecceEeeeeeEecccchHHHHHHHHHHHhhcCcccCcHHHhhhcccccccCcchhhhcCChhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999998876543210                                 02


Q ss_pred             HHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCC------------CcCCCh
Q 017089          209 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIG------------MEAAGI  276 (377)
Q Consensus       209 ~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~------------~~~~~l  276 (377)
                      ..++++|++.+.++..+-.+..   ...-.++.|++|||....++.+||++||.||.|+...            ....|+
T Consensus       246 ~v~~e~ke~v~qv~dtp~de~~---~~~i~~~~~efP~g~~~~~G~er~ripe~lF~Ps~v~~~s~~~~~~~~~n~~lG~  322 (426)
T KOG0679|consen  246 RVYQEFKESVLQVSDTPFDEEV---AAQIPTKHFEFPDGYTLDFGAERFRIPEYLFKPSLVKSSSKEAGATSHINTMLGL  322 (426)
T ss_pred             HHHHHHHHHHHhccCCCCcccc---cccCCCccccCCCCcccccCcceeecchhhcCcchhccccccccCCCCCccccCc
Confidence            2355666666655422211111   1123578999999999999999999999999998742            235699


Q ss_pred             HHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCC---CCccccchhhhhhhcccc
Q 017089          277 HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLST  353 (377)
Q Consensus       277 ~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~---~~~~~~w~Gasi~a~l~~  353 (377)
                      ++++..+|..||+|+|+.|+.|||+|||+|.||||.+||++||+.++|.+ ++++++..   ++.+++|+||||+|+|++
T Consensus       323 ~~lv~sSi~~cDvdiR~~L~~nVivtGGtSliqG~s~RL~~ELs~~~P~s-rlki~as~~t~eR~~~~WlGGSILASLgt  401 (426)
T KOG0679|consen  323 PHLVYSSINMCDVDIRSSLLGNVIVTGGTSLIQGFSERLNKELSKRAPSS-RLKIIASGHTVERRFQSWLGGSILASLGT  401 (426)
T ss_pred             hHHHHhhhccChHHHHHHhhccEEEecCcchhhhHHHHHHHHHHHhCCcc-eEEEEecCceeeehhhhhhhhHHHhcccc
Confidence            99999999999999999999999999999999999999999999999987 99998864   799999999999999999


Q ss_pred             cccccccHHHHhhcCC-ccccccc
Q 017089          354 FQQMWIAKAEYDESGP-SIVHRKC  376 (377)
Q Consensus       354 ~~~~~itr~~y~e~G~-~~~~~k~  376 (377)
                      |+++||||+||+|.|. +-+.|||
T Consensus       402 Fqq~WiSKqEYEE~G~d~~ve~rc  425 (426)
T KOG0679|consen  402 FQQLWISKQEYEEVGKDQLVERRC  425 (426)
T ss_pred             HHHHhhhHHHHHHhhhHHHHhhcC
Confidence            9999999999999999 8899998

>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton

Probab=100.00  E-value=4.7e-72  Score=533.69  Aligned_cols=367  Identities=70%  Similarity=1.195  Sum_probs=335.6

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccC-cceeeccccCCccCCHHHHHHH
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG-ILTLKYPIEHGIVSNWDDMEKI   87 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~-~~~~~~p~~~g~i~d~~~~~~~   87 (377)
                      +||||+||+++|+||++++.|++++||++++++......+.+....++|+++..... ...+++|+++|.+.||+.++.+
T Consensus         1 ~iViD~Gs~~~r~G~a~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~~G~~a~~~~~~~~~~~~P~~~G~i~d~~~~e~~   80 (371)
T cd00012           1 AVVIDNGSGTIKAGFAGEDAPRVVFPSCVGRPKHQSVMVGAGDKDYFVGEEALEKRGLGLELIYPIEHGIVVDWDDMEKI   80 (371)
T ss_pred             CEEEECCCCeEEEEeCCCCCCceEeeccceeecCcccccccCCCceEEchhhhhCCCCceEEcccccCCEEeCHHHHHHH
Confidence            689999999999999999999999999999887654333334567889999877654 3789999999999999999999


Q ss_pred             HHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceEEEEe
Q 017089           88 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI  167 (377)
Q Consensus        88 ~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~~v  167 (377)
                      |+++|.+.|..+++++++++++|+.++...|+++++++||.++++++++++++++|+|++|.++|+|||+|++.|+|+||
T Consensus        81 ~~~~~~~~l~~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~pv  160 (371)
T cd00012          81 WDHLFFNELKVNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNVPALYVAIQAVLSLYASGRTTGLVVDSGDGVTHVVPV  160 (371)
T ss_pred             HHHHHHHhcCCCCCCCceEEecCCCCCHHHHHHHHHHhhccCCCCEEEEechHHHHHHhcCCCeEEEEECCCCeeEEEEE
Confidence            99999878888888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHh-ccCCCcceEEEcCC
Q 017089          168 YEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETA-KTSSAVEKSYELPD  246 (377)
Q Consensus       168 ~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~p~  246 (377)
                      +||+++.++..++++||+++++++.++|++++..+....+...++++|+++|+++.++.++.... .........|.+||
T Consensus       161 ~~G~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~lpd  240 (371)
T cd00012         161 YDGYVLPHAIKRLDLAGRDLTRYLKELLRERGYELNSSDEREIVRDIKEKLCYVALDIEEEQDKSAKETSLLEKTYELPD  240 (371)
T ss_pred             ECCEEchhhheeccccHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHhheeecCCHHHHHHhhhccCCccceeEECCC
Confidence            99999999899999999999999999999888766666678899999999999999887765322 22344567899999


Q ss_pred             CcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCC-
Q 017089          247 GQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS-  325 (377)
Q Consensus       247 ~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~-  325 (377)
                      +..+.++.+|+.++|+||+|+..+....+|+++|.++|+.||.+.|+.+++||+||||+|++|||.+||++||..+.|. 
T Consensus       241 ~~~i~~~~er~~~~E~lF~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~Ivl~GG~s~~~gl~~rl~~el~~~~~~~  320 (371)
T cd00012         241 GRTIKVGNERFRAPEILFNPSLIGSEQVGISEAIYSSINKCDIDLRKDLYSNIVLSGGSTLFPGFGERLQKELLKLAPPS  320 (371)
T ss_pred             CeEEEEChHHhhChHhcCChhhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCEEEeCCccCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999998888889999999999999999999999999999999999999999999999999987 


Q ss_pred             -CceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccc
Q 017089          326 -SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRK  375 (377)
Q Consensus       326 -~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k  375 (377)
                       ...+++...++|.+++|+|||++|++.+|++.||||+||+|+|+++++||
T Consensus       321 ~~~~~~~~~~~~~~~~aw~G~si~as~~~~~~~~itk~eY~E~G~~~~~~k  371 (371)
T cd00012         321 KDTKVKVIAPPERKYSVWLGGSILASLSTFQQLWITKEEYEEHGPSIVHRK  371 (371)
T ss_pred             cceEEEEccCCCccccEEeCchhhcCchhhhheEeeHHHHhhhCchhEecC
Confidence             56678888889999999999999999999999999999999999999987

Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.

>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton]

Probab=100.00  E-value=1.5e-72  Score=476.87  Aligned_cols=371  Identities=50%  Similarity=0.910  Sum_probs=345.0

Q ss_pred             CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCc--cccCCCcceeeccchhcccCcceeeccccCCccCCHH
Q 017089            5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD   82 (377)
Q Consensus         5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~--~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~   82 (377)
                      ++.++||.|.|+.+.|+||||++.|.+++|+.+++|--...  .....-+++.||+++...++..++.||+.+|.+.||+
T Consensus         2 d~~~viV~DnGTGfVKcGyAg~NFP~~~FPs~VGRPilR~~e~~g~~~iKD~mvGdeaselRs~L~i~YPmeNGivrnwd   81 (389)
T KOG0677|consen    2 DSRNVIVCDNGTGFVKCGYAGENFPTHIFPSIVGRPILRAEEKVGNIEIKDLMVGDEASELRSLLDINYPMENGIVRNWD   81 (389)
T ss_pred             CCCCeEEEeCCCceEEeccccCCCcccccchhcCchhhhhhhhccCeehhhheccchHHHHHHHHhcCCccccccccChH
Confidence            46899999999999999999999999999999999843221  1112236788999999888889999999999999999


Q ss_pred             HHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCce
Q 017089           83 DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS  162 (377)
Q Consensus        83 ~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t  162 (377)
                      +++++|+|.|.+.|++++.+.++++++||++|...|+++++..||+++|..+++.-++++++|+.|..+|+|||.|.+.|
T Consensus        82 dM~h~WDytF~ekl~idp~~~KiLLTePPmNP~kNREKm~evMFEkY~F~gvyvaiQAVLtLYAQGL~tGvVvDSGDGVT  161 (389)
T KOG0677|consen   82 DMEHVWDYTFGEKLKIDPTNCKILLTEPPMNPTKNREKMIEVMFEKYGFGGVYVAIQAVLTLYAQGLLTGVVVDSGDGVT  161 (389)
T ss_pred             HHHHHHHhhhhhhccCCCccCeEEeeCCCCCccccHHHHHHHHHHHcCCCeEEehHHHHHHHHHhcccceEEEecCCCee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEE
Q 017089          163 HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY  242 (377)
Q Consensus       163 ~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~  242 (377)
                      .|+||++|..+++-..+++++|++++++|.++|..+|+.++.+++.+.++++|+++||++.|.+.+.+....+...-..|
T Consensus       162 Hi~PVye~~~l~HLtrRldvAGRdiTryLi~LLl~rGYafN~tADFETVR~iKEKLCYisYd~e~e~kLalETTvLv~~Y  241 (389)
T KOG0677|consen  162 HIVPVYEGFVLPHLTRRLDVAGRDITRYLIKLLLRRGYAFNHTADFETVREIKEKLCYISYDLELEQKLALETTVLVESY  241 (389)
T ss_pred             EEeeeecceehhhhhhhccccchhHHHHHHHHHHhhccccccccchHHHHHHHhhheeEeechhhhhHhhhhheeeeeee
Confidence            99999999999999999999999999999999999999999999999999999999999999988887777777788999


Q ss_pred             EcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhh
Q 017089          243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL  322 (377)
Q Consensus       243 ~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~  322 (377)
                      .+|||..|.++.|||.+||.||+|.+++-+.+++.+++.++|+..++|.|..+.++|||+||++..||+..||++||+++
T Consensus       242 tLPDGRvIkvG~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R~~lYkhIVLSGGstMYPGLPSRLEkElkql  321 (389)
T KOG0677|consen  242 TLPDGRVIKVGGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIRSELYKHIVLSGGSTMYPGLPSRLEKELKQL  321 (389)
T ss_pred             ecCCCcEEEecceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchHHHHHhHeeecCCcccCCCCcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999875


Q ss_pred             CC-----------CCceEEEECCCCCccccchhhhhhhcc-cccccccccHHHHhhcCCcccccc
Q 017089          323 AP-----------SSMKIKVVAPPERKYSVWIGGSILASL-STFQQMWIAKAEYDESGPSIVHRK  375 (377)
Q Consensus       323 ~~-----------~~~~v~v~~~~~~~~~~w~Gasi~a~l-~~~~~~~itr~~y~e~G~~~~~~k  375 (377)
                      .-           ...+++|-.||-+..-+|+||+++|.+ .+-+++|+||+||+|.|++.+.+.
T Consensus       322 yl~rVL~~d~~~l~KfkiRIEdPPrRKhMVflGGAVLA~imkD~d~fW~skqeyqE~G~~~l~k~  386 (389)
T KOG0677|consen  322 YLDRVLKGDTDKLKKFKIRIEDPPRRKHMVFLGGAVLAGIMKDKDEFWMSKQEYQEEGINVLNKL  386 (389)
T ss_pred             HHHHHHcCChhhhhheEEeccCCCccceeEEEchHHHHHHhcCCccceecHHHHHhhhHHHHHhh
Confidence            42           134688888999999999999999995 667899999999999999988764

>COG5277 Actin and related proteins [Cytoskeleton]

Probab=100.00  E-value=1.5e-68  Score=507.71  Aligned_cols=374  Identities=55%  Similarity=0.998  Sum_probs=339.1

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecC-CCCccccCCCcceeeccchhcccC--cceeeccccCCccCC
Q 017089            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQSKRG--ILTLKYPIEHGIVSN   80 (377)
Q Consensus         4 ~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~-~~~~~~~~~~~~~~vg~~~~~~~~--~~~~~~p~~~g~i~d   80 (377)
                      .++.+++|||+||+++|+||+|++.|++++|+++++.+ +..++....+.+.++|+++....+  ...+++|+++|.+.|
T Consensus         3 ~~~~~~iVIDnGS~~~k~Gfag~~~P~~V~ps~~~~~~~~~~~~~~~~~~~~~v~ne~~~~~~~~~~~~~~p~~~g~i~~   82 (444)
T COG5277           3 GDNVPTIVIDNGSGTTKAGFAGNDTPTTVFPSIVGRRRDEDSVMEDTEEKDTYVGNEAQNDRDNSLLELRYPIENGIILN   82 (444)
T ss_pred             CCCCCeEEEeCCCceEEeeecCCCCceeecccccccccccccccccccccccccCchhhhccCCccceeecccccCccCC
Confidence            44555599999999999999999999999999999886 444444555778899999877755  678999999999999


Q ss_pred             HHHHHHHHHHhccc--ccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCc--eEEEEe
Q 017089           81 WDDMEKIWHHTFYN--ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--TGIVLD  156 (377)
Q Consensus        81 ~~~~~~~~~~~~~~--~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~--~~lVVD  156 (377)
                      |++++++|+|+|.+  .+...+.++|+++++|++++...|+++++++||.++++++++..+++|++|+.|..  +|||||
T Consensus        83 W~~~e~~w~~~~~~~~~~~~~~~~~pllltep~~n~~~~re~~~e~~fE~~~vp~~~~~~~~~l~~ya~g~~~~~g~ViD  162 (444)
T COG5277          83 WDAMEQIWDYTFFNKGDLLPSPEEHPLLLTEPPLNPPSNREKITELLFETLNVPALYLAIQAVLSLYASGSSDETGLVID  162 (444)
T ss_pred             cHHHHHHHHHhhcchhhccCCCcCCceEEeccCCCcHHHHHHHHHHHHHhcCCcceEeeHHHHHHHHhcCCCCCceEEEE
Confidence            99999999999988  68888899999999999999999999999999999999999999999999999999  999999


Q ss_pred             CCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHH-----cCCCccch---hHHHHHHHHHHhcc-------ce
Q 017089          157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTT---AEREIVRDMKEKLA-------YI  221 (377)
Q Consensus       157 iG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~---~~~~~~~~ik~~~~-------~v  221 (377)
                      +|++.|+|+||+||.++.++.+++++||++++.+|.++|..     +++.+...   .+.++++.+|++.|       |+
T Consensus       163 ~G~~~t~v~PV~DG~~l~~a~~ri~~gG~~it~~l~~lL~~~~~~~~~~~l~~e~~~~~~ei~~~ik~e~~~~~~~~~y~  242 (444)
T COG5277         163 SGDSVTHVIPVVDGIVLPKAVKRIDIGGRDITDYLKKLLREKYPPSRGYNLKSELVEYSSEIVNEIKEEVCETDDESAYV  242 (444)
T ss_pred             cCCCceeeEeeeccccccccceeeecCcHHHHHHHHHHHhhcccccCCcccccccccccHHHHHHHHHhhccccccccch
Confidence            99999999999999999999999999999999999999998     66666665   56899999999999       88


Q ss_pred             ecCHHHHHHHhcc----------------CCCcceEEEcCCCcEEeeCCc-cccccccCCCCc--cCCCcCCC-------
Q 017089          222 ALDYEQELETAKT----------------SSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPS--MIGMEAAG-------  275 (377)
Q Consensus       222 ~~~~~~~~~~~~~----------------~~~~~~~~~~p~~~~i~i~~~-~~~~~E~lf~p~--~~~~~~~~-------  275 (377)
                      ..+.+++.+....                .......+..|+++.+.+..+ ||++||.+|.|.  ..+.+.++       
T Consensus       243 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~e~rf~~pE~lF~pe~~~~~l~~~~~~~~~~~  322 (444)
T COG5277         243 SLDAEEEFEEEEEKPAEKSTESTFQLSKETSIAKESKELPDGEEIEFGNEERFKAPEILFKPELPISGLEEAGKIDESKQ  322 (444)
T ss_pred             hhcchHHHHHHhhhhhhhcccccccccchhccccccccCCCCceEeechhhhhhcchhhcCCccccccccccccchhhhh
Confidence            7776665543322                223456789999999999988 999999999999  65544444       


Q ss_pred             --------------------hHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCC
Q 017089          276 --------------------IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP  335 (377)
Q Consensus       276 --------------------l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~  335 (377)
                                          |++++.++|+.|+.+.|+.|++|||||||+|++|||.+||++||+.+.|..+.+++..++
T Consensus       323 ~~~~~~~~~~~~~~~~~~~gl~e~v~~si~~~~~~~r~~l~~nivitGGts~~pg~~~Rl~~el~~~~p~~~~v~v~~~~  402 (444)
T COG5277         323 ELVAENYEISPTNLGNDIAGLPELVYQSIQICDEDVRKSLYSNIVLTGGTSKIPGFAERLQKELTSLAPSIWKVSVIPPP  402 (444)
T ss_pred             hhhhhccccccccccccccchHHHHHHHHHhccHHHHHHHhhCEEEecCccCCCCHHHHHHHHHHhhcCCCCceeeecCC
Confidence                                999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          336 ERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       336 ~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      +|.+.+|+|||++|++..|.+.||||+||+|+|+++++++||
T Consensus       403 ~~~~~~W~GaSila~~~~~~~~~itk~eY~e~G~~~~~~~~~  444 (444)
T COG5277         403 DPSLDAWLGASILASLETFQQLWITKEEYEEHGPDILQEKRF  444 (444)
T ss_pred             chhhccccchhhhccccchhheEeeHHHhhhhhhHHHhhccC
Confidence            999999999999999999999999999999999999999987

>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton]

Probab=100.00  E-value=4.6e-66  Score=449.22  Aligned_cols=362  Identities=30%  Similarity=0.570  Sum_probs=326.9

Q ss_pred             CCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhccc--CcceeeccccCCccCCHHH
Q 017089            6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--GILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         6 ~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~~~~p~~~g~i~d~~~   83 (377)
                      +..+||+|+|++++|+|+++++.|. ++|||+.+.++.       .+..++|++..+..  +...+++|+++|.+.+|+.
T Consensus         2 ~~~tiVlDNGay~~KiG~s~~~~p~-~vpNcl~kaK~~-------~rr~f~~nei~ec~D~ssL~y~rp~erGyLvnW~t   73 (400)
T KOG0680|consen    2 ETTTIVLDNGAYNIKIGPSTNKKPF-VVPNCLAKAKFG-------RRRSFLANEIDECKDISSLFYRRPHERGYLVNWDT   73 (400)
T ss_pred             CCceEEEcCCceeEEeccCCCCCce-eccchhhhcccc-------cchhhhhhhhhhccCccceEEeehhhcceeEeehh
Confidence            4679999999999999999999998 569999876653       44578888876664  4566789999999999999


Q ss_pred             HHHHHHHhcccc-cccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccccccc---C--------Cce
Q 017089           84 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS---G--------RTT  151 (377)
Q Consensus        84 ~~~~~~~~~~~~-L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~---g--------~~~  151 (377)
                      ..++|+++|.+. .+.+.+++.+++++|.++-++..+...+++||+++|.+++-.+.+.++++-.   +        ..+
T Consensus        74 q~~vWDy~f~~~~~~~~~~~~~ivlTep~~~~psi~~~t~eilFEey~fd~v~kttaa~lva~~~~~~~ne~~tt~~~~c  153 (400)
T KOG0680|consen   74 QSQVWDYCFGNPGFDVEGKDHNIVLTEPCMTFPSIQEHTDEILFEEYQFDAVLKTTAAVLVAFTKYVRNNEDSTTTSSEC  153 (400)
T ss_pred             HHHHHHHHhcCCCcCcccCcceEEEecccccccchhhhHHHHHHHHhccceEeecCHHHhcchhhhccCCccccccccce
Confidence            999999999653 4566789999999999999999999999999999999999999888888751   1        237


Q ss_pred             EEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHH
Q 017089          152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET  231 (377)
Q Consensus       152 ~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~  231 (377)
                      ++|||.|++.|.|+|+++|.+..++++++++||+.++++|++.+..++++...  +...++++|+..|||++|+.+.+..
T Consensus       154 ~lVIDsGysfThIip~v~g~~~~qaV~RiDvGGK~LTn~LKE~iSyR~lNvmd--ET~vVNeiKEdvcfVSqnF~~~m~~  231 (400)
T KOG0680|consen  154 CLVIDSGYSFTHIIPVVKGIPYYQAVKRIDVGGKALTNLLKETISYRHLNVMD--ETYVVNEIKEDVCFVSQNFKEDMDI  231 (400)
T ss_pred             EEEEeCCCceEEEehhhcCcchhhceEEeecchHHHHHHHHHHhhhhhhcccc--hhhhhhhhhhheEEechhhHHHHHH
Confidence            99999999999999999999999999999999999999999999988887754  7789999999999999999999887


Q ss_pred             hccCC---CcceEEEcCC-------------------CcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCH
Q 017089          232 AKTSS---AVEKSYELPD-------------------GQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDV  289 (377)
Q Consensus       232 ~~~~~---~~~~~~~~p~-------------------~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~  289 (377)
                      +....   .....|.+||                   .+.+.+..|||.+||+||+|++++..+.|++|+|.++|..||.
T Consensus       232 ~~~k~~~~~~~i~YvLPDF~T~k~Gyvr~~~vk~~~d~qii~L~nErF~IPEilF~Psdi~I~q~GIpEAV~esl~~~Pe  311 (400)
T KOG0680|consen  232 AKTKFQENKVMIDYVLPDFSTSKRGYVRNEDVKLPEDEQIITLTNERFTIPEILFSPSDIGIQQPGIPEAVLESLSMLPE  311 (400)
T ss_pred             HhhccccceeEEEEecCCcccccceeEecCCCCCCCCcceeeecccccccchhhcChhhcCcccCCchHHHHHHHHhCHH
Confidence            65542   3456777776                   3678889999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCC
Q 017089          290 DIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP  369 (377)
Q Consensus       290 ~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~  369 (377)
                      .+|+.|+.|||++||++++|||.+||..||++++|.++.++|..+.||..-+|.||+.++.+++|...||||+||+|+|+
T Consensus       312 ~~~p~l~~NIv~iGGn~~fPgF~~RL~~Elr~l~P~d~~v~V~~p~dp~~~~W~~g~~~~~~~~~~~~~itR~dy~E~G~  391 (400)
T KOG0680|consen  312 EVRPLLLENIVCIGGNSNFPGFRQRLARELRSLLPADWEVSVSVPEDPITFAWEGGSEFAKTDSFEKAVITREDYEEHGP  391 (400)
T ss_pred             HHHHHHHhcEEEecCccCCcchHHHHHHHHHhhCCccceEEEecCCCcceeeehhccccccCcchhcceecHhhHhhcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccC
Q 017089          370 SIVHRKCF  377 (377)
Q Consensus       370 ~~~~~k~~  377 (377)
                      +++.+|.|
T Consensus       392 ~~~~~~~~  399 (400)
T KOG0680|consen  392 SWCTKKRF  399 (400)
T ss_pred             hhhhhhcc
Confidence            99999876

>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton]

Probab=100.00  E-value=2.2e-53  Score=392.49  Aligned_cols=365  Identities=28%  Similarity=0.572  Sum_probs=311.5

Q ss_pred             CCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccC-cceeeccccCCccCCHHHH
Q 017089            6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG-ILTLKYPIEHGIVSNWDDM   84 (377)
Q Consensus         6 ~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~-~~~~~~p~~~g~i~d~~~~   84 (377)
                      ...|||||+||+.+|+|++|+..|+++|++.+.++++...    +....+||++...... -...++||++.++++|+.+
T Consensus        22 n~~piVIDNGS~~~RaGw~ge~eP~lvFrNvl~r~Rdrk~----~~s~t~vgnd~~~~~~~Rs~~rSPFd~nVvtNwel~   97 (645)
T KOG0681|consen   22 NTIPIVIDNGSYECRAGWAGEKEPRLVFRNVLTRPRDRKL----GASVTLVGNDILNFQGVRSSPRSPFDRNVVTNWELM   97 (645)
T ss_pred             CCCcEEEeCCceeEeecccCCCCccchhhhhhcccccccc----ccccccccchhhhhhhhhccCCCCCcCCccccHHHH
Confidence            3678999999999999999999999999999999986542    1223367776554322 2356899999999999999


Q ss_pred             HHHHHHhcccccccCC--CCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccc-cCC---ceEEEEeCC
Q 017089           85 EKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA-SGR---TTGIVLDSG  158 (377)
Q Consensus        85 ~~~~~~~~~~~L~~~~--~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~-~g~---~~~lVVDiG  158 (377)
                      |++++|+| .+|+.+.  -+||+++|++..+|...|..+.++|||.+|+|+|.+--+++.+.|. ++.   .+|+||++|
T Consensus        98 E~ilDY~F-~~LG~~~~~idhPIilTE~laNP~~~R~~m~elLFE~YgvP~V~yGIDslfS~~hN~~~~~~~~~liis~g  176 (645)
T KOG0681|consen   98 EQILDYIF-GKLGVDGQGIDHPIILTEALANPVYSRSEMVELLFETYGVPKVAYGIDSLFSFYHNYGKSSNKSGLIISMG  176 (645)
T ss_pred             HHHHHHHH-HhcCCCccCCCCCeeeehhccChHHHHHHHHHHHHHHcCCcceeechhhHHHHhhccCcccCcceEEEecC
Confidence            99999999 8899886  4899999999999999999999999999999999999999999883 333   369999999


Q ss_pred             CCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccC---
Q 017089          159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS---  235 (377)
Q Consensus       159 ~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~---  235 (377)
                      ++.|.|.||.||..+...++++++||.+...||..+++.++.-+.+...+..+++++..+|+++.|+.+++.+....   
T Consensus       177 ~~~T~vipvldG~~il~~~kRiN~GG~qa~dYL~~Lmq~Kyp~~~~~~t~sk~E~l~~eHcyis~DY~eei~~~l~~d~~  256 (645)
T KOG0681|consen  177 HSATHVIPVLDGRLILKDVKRINWGGYQAGDYLSRLMQLKYPFHLNAFTGSKAERLLHEHCYISPDYREEIIKILEMDYY  256 (645)
T ss_pred             CCcceeEEEecCchhhhcceeeccCcchHHHHHHHHHhccCccchhhcCHHHHHHHhhhhceeCcchHHHHHHHhhhhhh
Confidence            99999999999999999999999999999999999998776665555667788999999999988876643311100   


Q ss_pred             ----------------------------------------------------------------------CCcceEE---
Q 017089          236 ----------------------------------------------------------------------SAVEKSY---  242 (377)
Q Consensus       236 ----------------------------------------------------------------------~~~~~~~---  242 (377)
                                                                                            .+....|   
T Consensus       257 d~~~~~~qlP~~evl~~~e~~l~Ae~kqekRlq~~a~lkrv~k~~~re~~redeqql~~~~kaq~e~e~~~D~~q~~~ll  336 (645)
T KOG0681|consen  257 DENRNYFQLPYTEVLAEVELALTAEKKQEKRLQEQAALKRVEKINARENRREDEQQLESYNKAQGEQESNLDLEQKFPLL  336 (645)
T ss_pred             hccceEEecccccccchhhhhccHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHHhhhchhcCccHhhhchhh
Confidence                                                                                  0000000   


Q ss_pred             EcCC----------------------------------------------------------------------------
Q 017089          243 ELPD----------------------------------------------------------------------------  246 (377)
Q Consensus       243 ~~p~----------------------------------------------------------------------------  246 (377)
                      .+|+                                                                            
T Consensus       337 ~v~~eL~~d~lk~k~~qr~lkas~dar~rar~eke~Er~~k~~~~r~~~~~swl~e~r~k~~~ller~~~kk~lk~e~~~  416 (645)
T KOG0681|consen  337 NVPAELDEDQLKEKKKQRILKASTDARLRARVEKELERLNKLEEEREENLISWLEELREKLEKLLERISQKKRLKQELKD  416 (645)
T ss_pred             cchhhhCHHHHHHHHHHHHHHhhhhhhccccccchHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            0000                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q 017089          247 --------------------------------------------------------------------------------  246 (377)
Q Consensus       247 --------------------------------------------------------------------------------  246 (377)
                                                                                                      
T Consensus       417 r~s~~Sq~rmr~~~~La~~~~~rrk~~~~t~D~fg~~Dedw~vYe~lee~~~~~~~dl~~l~~~L~e~Dp~F~~~~~~~~  496 (645)
T KOG0681|consen  417 RKSHASQLRMRALARLAYEQVVRRKRKEATPDNFGARDEDWDVYEDLEEENKSILEDLKSLNHELLEFDPHFTQYVEGTT  496 (645)
T ss_pred             hhhhhhHhhhHHHHhhhHHHHHHHhcccCCccccccchhhHHHHHHhhhhhhhHHHHHHHHHHHHHhhCccccccccccc
Confidence                                                                                            


Q ss_pred             -------------CcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHH
Q 017089          247 -------------GQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIAD  313 (377)
Q Consensus       247 -------------~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~  313 (377)
                                   ...+.++.+++++||++|+|+++|.+++||.|++...+++.|.+.+..+.+||+||||+|.+||+++
T Consensus       497 d~~~~~~p~~~~e~~qlh~nVEriRvPEIiFqPsiiG~dQaGl~Ei~~~il~r~p~~eq~~lV~nVllTGG~s~~pGmke  576 (645)
T KOG0681|consen  497 DPRNGVLPGFTAEDYQLHLNVERIRVPEIIFQPSIIGIDQAGLAEIMDTILRRYPHDEQEKLVSNVLLTGGCSQLPGMKE  576 (645)
T ss_pred             CcccCcchhHHHhhhhhhhcceeeccceeeeccccccchhhhHHHHHHHHHHhCchhhhHhhhhheEeecccccCcCHHH
Confidence                         0145567799999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccc
Q 017089          314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRK  375 (377)
Q Consensus       314 rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k  375 (377)
                      ||.+||.++.|..++|.|..+.||.+++|.||+.+|...+|...++||+||+|+|+..++.-
T Consensus       577 Ri~kElt~mrP~gS~i~V~rasdP~LDAW~GA~~~a~n~~f~~~~~Tr~dy~E~G~e~~kEh  638 (645)
T KOG0681|consen  577 RIKKELTSMRPVGSSINVVRASDPVLDAWRGASAWAANPTFTLTQITRKDYEEKGEEYLKEH  638 (645)
T ss_pred             HHHHHhheecccCCceEEEecCCcchhhhhhhHHhhcCcccchhhhhHHhhhhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999877643

>KOG0678 consensus Actin-related protein Arp2/3 complex, subunit Arp3 [Cytoskeleton]

Probab=100.00  E-value=5.5e-52  Score=361.85  Aligned_cols=367  Identities=40%  Similarity=0.689  Sum_probs=312.4

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCc--------cccCCCcceeeccchhcccCcceeeccccCCcc
Q 017089            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV   78 (377)
Q Consensus         7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i   78 (377)
                      +.++|+|+|+.++|.||+|+..|++++|++++......+        .-+..+.++++|++++. .+.+.+.+|+++|.+
T Consensus         4 ~~p~V~d~Gtgytklg~agn~~p~~i~p~~ia~~~~~~~s~~~~~~~~~~~~dldf~ig~eal~-~~~ysl~ypiRhg~v   82 (415)
T KOG0678|consen    4 NLPCVIDNGTGYTKLGYAGNTEPQFIIPTAIAVKESAAVSSKATRRVKRGTEDLDFFIGDEALD-ATTYSLKYPIRHGQV   82 (415)
T ss_pred             CCceeeccCcceeeeeccccCCcccccceeEEeccccccccchhhhhhccccccceecccHHHh-hcccccccceecccc
Confidence            455999999999999999999999999999876432211        11234568899999988 557889999999999


Q ss_pred             CCHHHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccC--------Cc
Q 017089           79 SNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG--------RT  150 (377)
Q Consensus        79 ~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g--------~~  150 (377)
                      .||+.++++|...+.+.|..+|++|..++++|++++.++|+.+.++.||.++++.+++.-++++|+-+.-        .-
T Consensus        83 e~wd~mer~~~q~ifkylr~ePedh~fLlteppln~penreytaeImfEsfnvpglyiAVqavLALaaswts~~v~er~l  162 (415)
T KOG0678|consen   83 EDWDLMERFWEQCIFKYLRAEPEDHYFLLTEPPLNQPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERFL  162 (415)
T ss_pred             ccHHHHHHHHhhhhhhhhcCCcccceEEecCCCCCCchhhHHHHHhhhhhccCchHHHHHHHHHHHHHHHHHhhhhhhee
Confidence            9999999999999889999999999999999999999999999999999999999999999988866542        35


Q ss_pred             eEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHH
Q 017089          151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELE  230 (377)
Q Consensus       151 ~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~  230 (377)
                      +|+|||.|.+.|.|.||.+|+++-++.+..|+.|++++..+.++|++++..++.....+.++.+|+++||+.+|.-++..
T Consensus       163 tG~VidsGdgvThvipvaEgyVigScik~iPiagrdiT~fiQ~llRer~~~iP~e~sl~tak~iKe~ycy~cPdivkef~  242 (415)
T KOG0678|consen  163 TGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYTCPDIVKEFA  242 (415)
T ss_pred             eeEEEecCCCeeEEEEeecceEEeeeeccccccCCchhHHHHHHhhCCCCCCChHHhhhhhHHHHhhhcccCcHHHHHHH
Confidence            89999999999999999999999999999999999999999999998888888777889999999999999999887766


Q ss_pred             HhccCCCc-ceEE---EcCCC--cEEeeCCccccccccCCCCccCCCc-CCChHHHHHHHHhcCCHHHHHHhhcCccccc
Q 017089          231 TAKTSSAV-EKSY---ELPDG--QVITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSG  303 (377)
Q Consensus       231 ~~~~~~~~-~~~~---~~p~~--~~i~i~~~~~~~~E~lf~p~~~~~~-~~~l~~~I~~~i~~~~~~~~~~l~~nIil~G  303 (377)
                      ++...+.. .+.|   .+-.+  ..+.++.+||..+|++|.|.....+ ...|++.+...|+.||+|.|+.|++||++.|
T Consensus       243 k~d~ep~K~ikq~~~~~~i~~~~~~vDvgyerFlgpEiff~Pe~a~~d~~~~~~~~vd~~Iq~~pIdvrr~ly~nivlsg  322 (415)
T KOG0678|consen  243 KYDREPAKWIKQYTGINVITGKKFVVDVGYERFLGPEIFFHPEFANPDFLTPLSEVVDWVIQHCPIDVRRPLYKNIVLSG  322 (415)
T ss_pred             HhccCHHHHHHHHhccchhcCCceeecccHHhhcChhhhcCccccCCccCcchHHHhhhhhhhCCcccchhhhhHHhhcc
Confidence            55432211 0111   11122  2456788999999999999886543 5579999999999999999999999999999


Q ss_pred             CCcCCcChHHHHHHHHHhhCC--------------CCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCC
Q 017089          304 GSTMFPGIADRMSKEITALAP--------------SSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP  369 (377)
Q Consensus       304 G~s~i~gl~~rl~~eL~~~~~--------------~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~  369 (377)
                      |.+..++|.+|++++++.+..              ....+.++...-..+++|.|++++++...|-..+=||++|+|+|+
T Consensus       323 gst~fk~fgr~lqrD~kr~vd~rl~~s~~lsg~k~~~vdvqvish~~qr~avwfggs~lastpef~~~~~tk~~yee~g~  402 (415)
T KOG0678|consen  323 GSTMFKDFGRRLQRDLKRLVDTRLAESEGLSGIKSKPVDVQVLSHLLQRTAVWFGGSKLASTPEFVPACHTKEDYEEYGP  402 (415)
T ss_pred             chHHHHHhhhhccHHHHHHHHHHHHHhcccccCCCCCceeehhhhhhhhcceeccCccccCCcccccccCcchhhhhhCh
Confidence            999999999999988875431              112356666666789999999999999999999999999999999


Q ss_pred             ccccc
Q 017089          370 SIVHR  374 (377)
Q Consensus       370 ~~~~~  374 (377)
                      +|++.
T Consensus       403 si~r~  407 (415)
T KOG0678|consen  403 SICRT  407 (415)
T ss_pred             hhhhc
Confidence            99875

>KOG0797 consensus Actin-related protein [Cytoskeleton]

Probab=100.00  E-value=6.9e-40  Score=301.07  Aligned_cols=313  Identities=19%  Similarity=0.379  Sum_probs=241.0

Q ss_pred             CcceeeccccCCccCC----------HHHHHHHHHHhcccccccCC---CCCcEEEeeCCCCCHHhHHHHHhhccccCCC
Q 017089           65 GILTLKYPIEHGIVSN----------WDDMEKIWHHTFYNELRVAP---EEHPVLLTEAPLNPKANREKMTQIMFETFNT  131 (377)
Q Consensus        65 ~~~~~~~p~~~g~i~d----------~~~~~~~~~~~~~~~L~~~~---~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~  131 (377)
                      ..+.+++|+++|.+.-          .+++.++|+|++.+.|++++   ..+.+|+++|..+.+.+.+.++.++|-+++|
T Consensus       177 ~~y~l~~Pir~G~fNv~~~y~Slq~l~~dlt~il~yaL~e~L~Ip~~kl~qy~aVlVVpD~f~r~hveefl~ilL~eL~F  256 (618)
T KOG0797|consen  177 SPYCLYHPIRRGHFNVSPPYYSLQRLCEDLTAILDYALLEKLHIPHKKLFQYHAVLVVPDTFDRRHVEEFLTILLGELGF  256 (618)
T ss_pred             CcceeecccccceeccCCcchhHHHHHHHHHHHHHHHHHHhcCCChhHhcceeEEEEecchhhHHHHHHHHHHHHHHhcc
Confidence            3578899999997642          37789999999989999985   4789999999999999999999999999999


Q ss_pred             CeEEeeecccccccccCCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCc-----cchh
Q 017089          132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF-----TTTA  206 (377)
Q Consensus       132 ~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~-----~~~~  206 (377)
                      .++.++.+++||+|+.|.+++||||||+..|+|+||.||..++++...+++||.+|++.+..+|++.+..+     ....
T Consensus       257 ~~~~v~QESlaatfGaGlss~CVVdiGAQkTsIaCVEdGvs~~ntri~L~YGGdDitr~f~~ll~rs~FPy~d~~v~~~~  336 (618)
T KOG0797|consen  257 NSAVVHQESLAATFGAGLSSACVVDIGAQKTSIACVEDGVSLPNTRIILPYGGDDITRCFLWLLRRSGFPYQDCDVLAPI  336 (618)
T ss_pred             ceEEEEhhhhHHHhcCCccceeEEEccCcceeEEEeecCccccCceEEeccCCchHHHHHHHHHHhcCCCcccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999887654     3456


Q ss_pred             HHHHHHHHHHhccceecCHH-HHHHHhc--cCCC--cce--------------------------------EEEcCCCc-
Q 017089          207 EREIVRDMKEKLAYIALDYE-QELETAK--TSSA--VEK--------------------------------SYELPDGQ-  248 (377)
Q Consensus       207 ~~~~~~~ik~~~~~v~~~~~-~~~~~~~--~~~~--~~~--------------------------------~~~~p~~~-  248 (377)
                      ++..++++|+++|......- .....+.  .+..  ...                                .|..||.+ 
T Consensus       337 d~lLl~~LKe~Fc~l~~a~~~vQ~~~F~~R~pn~~~~kytfk~~DE~mlAPlaLF~P~lf~~~~tk~~~~q~~~q~d~~d  416 (618)
T KOG0797|consen  337 DWLLLNQLKEKFCHLRAAELGVQLTVFSYREPNPPTLKYTFKLGDEVMLAPLALFYPNLFVIEGTKSHKNQSFPQPDRED  416 (618)
T ss_pred             cHHHHHHHHHHhccccHhhhhhhhhhhhccCCCCcceeeeeeccchhhccchhhhhhhhhhccccccccccccCCCCccc
Confidence            78899999999998753211 1111110  0000  001                                12222210 


Q ss_pred             ----------------------EEeeC-------CccccccccCCCCccC-----------------------------C
Q 017089          249 ----------------------VITIG-------AERFRCPEVLFQPSMI-----------------------------G  270 (377)
Q Consensus       249 ----------------------~i~i~-------~~~~~~~E~lf~p~~~-----------------------------~  270 (377)
                                            ...++       ..|-..+|..-.+.+.                             -
T Consensus       417 ~fd~e~~~~~~~~~~~~~~g~~~l~ls~~i~~~~~~~~~l~~~~d~~Elg~t~~d~f~p~~~s~~gslaa~~i~n~~~~~  496 (618)
T KOG0797|consen  417 LFDYEYLLEDTWKQDFGGGGNDGLQLSDSIGFSNRIRDQLPEKPDKEELGVTLKDNFAPLEKSIVGSLAAASIMNKKGLY  496 (618)
T ss_pred             ccchhhhhhhcccccccccccccccccccccccccccccccccccchhhccccccccCCchhhhhhhhhhhhhhccccee
Confidence                                  00000       0011111111111100                             0


Q ss_pred             C----cCCChHHHHHHHHhcC-CHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCC----ceEEEECCC---CCc
Q 017089          271 M----EAAGIHETTYNSIMKC-DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSS----MKIKVVAPP---ERK  338 (377)
Q Consensus       271 ~----~~~~l~~~I~~~i~~~-~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~----~~v~v~~~~---~~~  338 (377)
                      .    -...+.+.|..+|..+ ..+.+++|.+.|.++||+...||+.+.|++.+....|..    ..|.|+.+|   ||+
T Consensus       497 ~~f~gl~l~ldqsii~sid~~~sdd~~rKl~sSil~Vgga~~~~g~~~~LEeRi~n~~pp~~~~I~~VsVip~prdMdp~  576 (618)
T KOG0797|consen  497 ESFYGLLLALDQSIISSIDSALSDDTKRKLFSSILLVGGAGLFPGLVAALEERILNAIPPGREAIDTVSVIPPPRDMDPQ  576 (618)
T ss_pred             ccccchhhccchhHHHhhhhhccchhhHhhhhHHHhhcccccchhHHHHHHHHHhccCCccccccCceeecCCCcCCCch
Confidence            0    1224556688888877 567899999999999999999999999999998766652    247787766   899


Q ss_pred             cccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          339 YSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       339 ~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      +-+|+||+|+|.++.-.++||++.||.-+|.++++.||.
T Consensus       577 ~VaWKGaaIla~l~~~~ELwI~~~dW~~~G~RvL~~k~~  615 (618)
T KOG0797|consen  577 FVAWKGAAILAILDFVRELWIENSDWQVHGVRVLQYKKY  615 (618)
T ss_pred             heEecchhhhhHHHHHHHHheechhHhhhhhhhhhhccc
Confidence            999999999999998899999999999999999999974

>PRK13930 rod shape-determining protein MreB; Provisional

Probab=100.00  E-value=7.4e-38  Score=294.56  Aligned_cols=308  Identities=19%  Similarity=0.250  Sum_probs=236.5

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcc----cCcceeeccccCCccCCHHHH
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWDDM   84 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~d~~~~   84 (377)
                      .++||+||+++|+|++++. +.+..||+++.....       ++..++|+++.+.    .....+.+|+++|.+.||+..
T Consensus        10 ~vgiDlGt~~t~i~~~~~~-~~~~~ps~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~pi~~G~i~d~~~~   81 (335)
T PRK13930         10 DIGIDLGTANTLVYVKGKG-IVLNEPSVVAIDTKT-------GKVLAVGEEAKEMLGRTPGNIEAIRPLKDGVIADFEAT   81 (335)
T ss_pred             ceEEEcCCCcEEEEECCCC-EEEecCCEEEEECCC-------CeEEEEcHHHHHhhhcCCCCeEEeecCCCCeEcCHHHH
Confidence            3999999999999998765 455679999875421       2346899998765    244678999999999999999


Q ss_pred             HHHHHHhccccccc-CCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCC
Q 017089           85 EKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSG  158 (377)
Q Consensus        85 ~~~~~~~~~~~L~~-~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG  158 (377)
                      +.+|++++.+.+.. .....++++++|..++...|+.+.+ +||.+|++.++++++|+||++++|.     .+++|||+|
T Consensus        82 e~ll~~~~~~~~~~~~~~~~~vvit~P~~~~~~~r~~~~~-~~e~~g~~~~~lv~ep~AAa~a~g~~~~~~~~~lVvDiG  160 (335)
T PRK13930         82 EAMLRYFIKKARGRRFFRKPRIVICVPSGITEVERRAVRE-AAEHAGAREVYLIEEPMAAAIGAGLPVTEPVGNMVVDIG  160 (335)
T ss_pred             HHHHHHHHHHHhhcccCCCCcEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEecccHHHHHHhcCCCcCCCCceEEEEeC
Confidence            99999999444442 2336789999999999998888777 5799999999999999999999987     578999999


Q ss_pred             CCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCc
Q 017089          159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAV  238 (377)
Q Consensus       159 ~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~  238 (377)
                      +++|+++++.+|.++  .....++||.++++++.+++.++ +.+.  ...+.++++|+++|++..+.+.+.  .... ..
T Consensus       161 ~gttdvs~v~~g~~~--~~~~~~lGG~~id~~l~~~l~~~-~~~~--~~~~~ae~~K~~~~~~~~~~~~~~--~~~~-~~  232 (335)
T PRK13930        161 GGTTEVAVISLGGIV--YSESIRVAGDEMDEAIVQYVRRK-YNLL--IGERTAEEIKIEIGSAYPLDEEES--MEVR-GR  232 (335)
T ss_pred             CCeEEEEEEEeCCEE--eecCcCchhHHHHHHHHHHHHHH-hCCC--CCHHHHHHHHHHhhcCcCCCCCce--EEEE-Cc
Confidence            999999999999887  45678999999999999999754 2221  134679999999998865532110  0000 00


Q ss_pred             ceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcC-cccccCCcCCcChHHHHHH
Q 017089          239 EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGN-IVLSGGSTMFPGIADRMSK  317 (377)
Q Consensus       239 ~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~n-Iil~GG~s~i~gl~~rl~~  317 (377)
                      ...+.+|+  .+.++.+++  .|++|.+      ..++.+.|.++|.+++.+.+..+++| |+||||+|++|||.+||++
T Consensus       233 ~~~~~~~~--~~~i~~~~~--~e~i~~~------~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipg~~~~l~~  302 (335)
T PRK13930        233 DLVTGLPK--TIEISSEEV--REALAEP------LQQIVEAVKSVLEKTPPELAADIIDRGIVLTGGGALLRGLDKLLSE  302 (335)
T ss_pred             cCCCCCCe--eEEECHHHH--HHHHHHH------HHHHHHHHHHHHHhCCHHHhhHHHhCCEEEECchhcchhHHHHHHH
Confidence            01111222  344454444  4777765      23588899999999999989999987 9999999999999999999


Q ss_pred             HHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       318 eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ++.        +++....+|..++-.||++++.-
T Consensus       303 ~~~--------~~v~~~~~p~~ava~Ga~~~~~~  328 (335)
T PRK13930        303 ETG--------LPVHIAEDPLTCVARGTGKALEN  328 (335)
T ss_pred             HHC--------CCceecCCHHHHHHHHHHHHHhC
Confidence            984        22333456788999999998754

>PRK13927 rod shape-determining protein MreB; Provisional

Probab=100.00  E-value=2.8e-36  Score=283.53  Aligned_cols=306  Identities=19%  Similarity=0.257  Sum_probs=229.0

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcc----cCcceeeccccCCccCCHHHH
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWDDM   84 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~d~~~~   84 (377)
                      .|+||+||+++|+|+++++. .+.+||+++.++..       +..+++|+++...    .....+.+|+++|.+.||+..
T Consensus         7 ~igIDlGt~~~~i~~~~~~~-~~~~ps~v~~~~~~-------~~~~~vG~~a~~~~~~~~~~~~~~~pi~~G~i~d~~~~   78 (334)
T PRK13927          7 DLGIDLGTANTLVYVKGKGI-VLNEPSVVAIRTDT-------KKVLAVGEEAKQMLGRTPGNIVAIRPMKDGVIADFDVT   78 (334)
T ss_pred             eeEEEcCcceEEEEECCCcE-EEecCCEEEEECCC-------CeEEEecHHHHHHhhcCCCCEEEEecCCCCeecCHHHH
Confidence            59999999999999998876 56789999987542       1246899998765    255678899999999999999


Q ss_pred             HHHHHHhcccccccCCCCC-cEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCC
Q 017089           85 EKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSG  158 (377)
Q Consensus        85 ~~~~~~~~~~~L~~~~~~~-~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG  158 (377)
                      +.+|++++.+.+.. +..+ .+++++|..++...| +.++.+|+.+|++.+.++++|+||++++|.     .+++|||+|
T Consensus        79 ~~ll~~~~~~~~~~-~~~~~~~vi~vP~~~~~~~r-~~~~~a~~~ag~~~~~li~ep~aaa~~~g~~~~~~~~~lvvDiG  156 (334)
T PRK13927         79 EKMLKYFIKKVHKN-FRPSPRVVICVPSGITEVER-RAVRESALGAGAREVYLIEEPMAAAIGAGLPVTEPTGSMVVDIG  156 (334)
T ss_pred             HHHHHHHHHHHhhc-cCCCCcEEEEeCCCCCHHHH-HHHHHHHHHcCCCeeccCCChHHHHHHcCCcccCCCeEEEEEeC
Confidence            99999999766666 5445 577777766555554 567777899999999999999999999987     467999999


Q ss_pred             CCceEEEEe-eCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCC
Q 017089          159 DGVSHTVPI-YEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSA  237 (377)
Q Consensus       159 ~~~t~i~~v-~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~  237 (377)
                      +++|+++++ .+|....+   ..++||+++|++|.+++.++ +.+.  .+.+.++++|+++|++..+.+..  ..... .
T Consensus       157 ggttdvs~v~~~~~~~~~---~~~lGG~~id~~l~~~l~~~-~~~~--~~~~~ae~iK~~~~~~~~~~~~~--~~~~~-~  227 (334)
T PRK13927        157 GGTTEVAVISLGGIVYSK---SVRVGGDKFDEAIINYVRRN-YNLL--IGERTAERIKIEIGSAYPGDEVL--EMEVR-G  227 (334)
T ss_pred             CCeEEEEEEecCCeEeeC---CcCChHHHHHHHHHHHHHHH-hCcC--cCHHHHHHHHHHhhccCCCCCCc--eEEEe-C
Confidence            999999999 66655433   35899999999999998643 2221  13467999999999875432100  00000 0


Q ss_pred             cceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhc-CcccccCCcCCcChHHHHH
Q 017089          238 VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIADRMS  316 (377)
Q Consensus       238 ~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~-nIil~GG~s~i~gl~~rl~  316 (377)
                      ....+.+|+  .+.++.+++  .|++|.|      ..++.+.|.++|.+++.+.++.+++ +|+||||+|++||+.+||+
T Consensus       228 ~~~~~~~~~--~~~i~~~~~--~e~i~~~------~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipgl~~~l~  297 (334)
T PRK13927        228 RDLVTGLPK--TITISSNEI--REALQEP------LSAIVEAVKVALEQTPPELAADIVDRGIVLTGGGALLRGLDKLLS  297 (334)
T ss_pred             cccCCCCCe--EEEECHHHH--HHHHHHH------HHHHHHHHHHHHHHCCchhhhhhhcCCEEEECchhhhhHHHHHHH
Confidence            000011121  345555555  3777665      2358899999999999888888887 4999999999999999999


Q ss_pred             HHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          317 KEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       317 ~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +++.        +++....+|..++-.||++++.-
T Consensus       298 ~~~~--------~~v~~~~~P~~ava~Ga~~~~~~  324 (334)
T PRK13927        298 EETG--------LPVHVAEDPLTCVARGTGKALEN  324 (334)
T ss_pred             HHHC--------CCcEecCCHHHHHHHHHHHHHhh
Confidence            9983        23334456789999999998754

>TIGR00904 mreB cell shape determining protein, MreB/Mrl family

Probab=100.00  E-value=1.6e-35  Score=277.99  Aligned_cols=311  Identities=16%  Similarity=0.214  Sum_probs=231.9

Q ss_pred             EEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcc----cCcceeeccccCCccCCHHHHH
Q 017089           10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWDDME   85 (377)
Q Consensus        10 vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~d~~~~~   85 (377)
                      +.||+||.++++...++ .-.+..||+++...+.+   +....-+.+|++|...    .....+++|+++|.+.||+..+
T Consensus         5 ~giDlGt~~s~i~~~~~-~~~~~~psvv~~~~~~~---~~~~~~~~vG~~A~~~~~~~~~~~~~~~pi~~G~i~d~~~~~   80 (333)
T TIGR00904         5 IGIDLGTANTLVYVKGR-GIVLNEPSVVAIRTDRD---AKTKSILAVGHEAKEMLGKTPGNIVAIRPMKDGVIADFEVTE   80 (333)
T ss_pred             eEEecCcceEEEEECCC-CEEEecCCEEEEecCCC---CCCCeEEEEhHHHHHhhhcCCCCEEEEecCCCCEEEcHHHHH
Confidence            99999999999865432 23345688888754321   0012336799998775    3567789999999999999999


Q ss_pred             HHHHHhcccccccCCC-CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCC
Q 017089           86 KIWHHTFYNELRVAPE-EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGD  159 (377)
Q Consensus        86 ~~~~~~~~~~L~~~~~-~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~  159 (377)
                      .+|++++.+.+..... ..++++++|+.++..+|+. ++.+|+.+|++.+.++++|+||++++|.     .+++|||+|+
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~-~~~~~~~ag~~~~~li~ep~aaa~~~g~~~~~~~~~lVvDiG~  159 (333)
T TIGR00904        81 KMIKYFIKQVHSRKSFFKPRIVICVPSGITPVERRA-VKESALSAGAREVYLIEEPMAAAIGAGLPVEEPTGSMVVDIGG  159 (333)
T ss_pred             HHHHHHHHHHhcccccCCCcEEEEeCCCCCHHHHHH-HHHHHHHcCCCeEEEecCHHHHHHhcCCcccCCceEEEEEcCC
Confidence            9999999666553222 2369999999999999988 5557799999999999999999999987     6899999999


Q ss_pred             CceEEEEe-eCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCc
Q 017089          160 GVSHTVPI-YEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAV  238 (377)
Q Consensus       160 ~~t~i~~v-~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~  238 (377)
                      ++|++++| .+|.....   ..++||+++++.|.+++.++. ..  ..+.+.++++|+++|++..+..++.. ... ...
T Consensus       160 gttdvs~v~~~~~~~~~---~~~lGG~did~~l~~~l~~~~-~~--~~~~~~ae~lK~~l~~~~~~~~~~~~-~~~-~~~  231 (333)
T TIGR00904       160 GTTEVAVISLGGIVVSR---SIRVGGDEFDEAIINYIRRTY-NL--LIGEQTAERIKIEIGSAYPLNDEPRK-MEV-RGR  231 (333)
T ss_pred             CeEEEEEEEeCCEEecC---CccchHHHHHHHHHHHHHHHh-cc--cCCHHHHHHHHHHHhccccccccccc-eee-cCc
Confidence            99999999 66655533   358999999999999886432 11  12356799999999987554211110 000 001


Q ss_pred             ceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhc-CcccccCCcCCcChHHHHHH
Q 017089          239 EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIADRMSK  317 (377)
Q Consensus       239 ~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~-nIil~GG~s~i~gl~~rl~~  317 (377)
                      ...+.+|++.  .++.+  .+.|++|.|      ..++.+.|.+++.+++.+.+..+++ +|+||||+|++||+.+||++
T Consensus       232 ~~~~~~~~~~--~i~~~--~~~e~i~~~------~~~i~~~i~~~l~~~~~~~~~~l~~~~IvL~GGss~ipgl~e~l~~  301 (333)
T TIGR00904       232 DLVTGLPRTI--EITSV--EVREALQEP------VNQIVEAVKRTLEKTPPELAADIVERGIVLTGGGALLRNLDKLLSK  301 (333)
T ss_pred             cccCCCCeEE--EECHH--HHHHHHHHH------HHHHHHHHHHHHHhCCchhhhhhccCCEEEECcccchhhHHHHHHH
Confidence            1123445443  33322  566888877      2358888999999999888888886 79999999999999999999


Q ss_pred             HHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       318 eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ++.        +.+....+|..++-.||++++..
T Consensus       302 ~~~--------~~v~~~~~P~~~va~Ga~~~~~~  327 (333)
T TIGR00904       302 ETG--------LPVIVADDPLLCVAKGTGKALED  327 (333)
T ss_pred             HHC--------CCceecCChHHHHHHHHHHHHhC
Confidence            993        23445567899999999998653

A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.

>PRK13929 rod-share determining protein MreBH; Provisional

Probab=100.00  E-value=3.5e-35  Score=275.08  Aligned_cols=302  Identities=18%  Similarity=0.322  Sum_probs=228.7

Q ss_pred             cEEEeCCCCceEEeeeCCCCCC-CCCCceeEecCCCCccccCCCcceeeccchhccc----CcceeeccccCCccCCHHH
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPR-AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~-~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~d~~~   83 (377)
                      .+.||+||.++++ |... .+. ...||+++.....       ..-++||++|..+.    ....+.+|+++|.+.||+.
T Consensus         6 ~~giDlGt~~~~i-~~~~-~~~~~~~ps~va~~~~~-------~~~~~vG~~A~~~~~~~p~~~~~~~pi~~G~I~d~d~   76 (335)
T PRK13929          6 EIGIDLGTANILV-YSKN-KGIILNEPSVVAVDTET-------KAVLAIGTEAKNMIGKTPGKIVAVRPMKDGVIADYDM   76 (335)
T ss_pred             eEEEEcccccEEE-EECC-CcEEecCCcEEEEECCC-------CeEEEeCHHHHHhhhcCCCcEEEEecCCCCccCCHHH
Confidence            5999999999998 4322 232 3468888764321       12257999997763    5567789999999999999


Q ss_pred             HHHHHHHhccc---ccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccC-----CceEEEE
Q 017089           84 MEKIWHHTFYN---ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG-----RTTGIVL  155 (377)
Q Consensus        84 ~~~~~~~~~~~---~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-----~~~~lVV  155 (377)
                      .+.+|++++.+   .++..+...++++++|+.++..+|+.+.+ +++.+|++.+.++++|+||++++|     ..+++||
T Consensus        77 ~~~~l~~~~~~~~~~l~~~~~~~~vvitvP~~~~~~~R~~l~~-a~~~ag~~~~~li~ep~Aaa~~~g~~~~~~~~~lvv  155 (335)
T PRK13929         77 TTDLLKQIMKKAGKNIGMTFRKPNVVVCTPSGSTAVERRAISD-AVKNCGAKNVHLIEEPVAAAIGADLPVDEPVANVVV  155 (335)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCeEEEEcCCCCCHHHHHHHHH-HHHHcCCCeeEeecCHHHHHHhcCCCcCCCceEEEE
Confidence            99999999863   45655556789999999999999999999 779999999999999999999997     4679999


Q ss_pred             eCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccC
Q 017089          156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS  235 (377)
Q Consensus       156 DiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~  235 (377)
                      |+|+++|+++++..|..+  .....++||++++++|.+++.+. +.+..  +...+|++|+++|++..+.+++.....  
T Consensus       156 DiG~gtt~v~vi~~~~~~--~~~~~~~GG~~id~~l~~~l~~~-~~~~~--~~~~AE~iK~~l~~~~~~~~~~~~~v~--  228 (335)
T PRK13929        156 DIGGGTTEVAIISFGGVV--SCHSIRIGGDQLDEDIVSFVRKK-YNLLI--GERTAEQVKMEIGYALIEHEPETMEVR--  228 (335)
T ss_pred             EeCCCeEEEEEEEeCCEE--EecCcCCHHHHHHHHHHHHHHHH-hCcCc--CHHHHHHHHHHHcCCCCCCCCceEEEe--
Confidence            999999999999555444  23346899999999999999753 23222  346799999999987544321100000  


Q ss_pred             CCcceEEEcCCCcEEeeCCcccc--ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhc-CcccccCCcCCcChH
Q 017089          236 SAVEKSYELPDGQVITIGAERFR--CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIA  312 (377)
Q Consensus       236 ~~~~~~~~~p~~~~i~i~~~~~~--~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~-nIil~GG~s~i~gl~  312 (377)
                       .....+.+|  ..+.++.+++.  +.|.+|+          +.+.|.++|.+++.+.+..+++ +|+||||+|++|||.
T Consensus       229 -g~~~~~~~p--~~i~i~~~~~~~~i~~~l~~----------i~~~i~~~L~~~~~~l~~~~~~~gIvLtGG~s~lpgl~  295 (335)
T PRK13929        229 -GRDLVTGLP--KTITLESKEIQGAMRESLLH----------ILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIK  295 (335)
T ss_pred             -CCccCCCCC--eEEEEcHHHHHHHHHHHHHH----------HHHHHHHHHHhCCcccchhhcCCCEEEEchhhhhhhHH
Confidence             000011222  35666666665  4566653          8999999999999999989998 699999999999999


Q ss_pred             HHHHHHHHhhCCCCceEEEECCCCCccccchhhhhh
Q 017089          313 DRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL  348 (377)
Q Consensus       313 ~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~  348 (377)
                      +|+++++.-        .+....+|..++-.|+..+
T Consensus       296 e~l~~~~~~--------~v~~~~~P~~~Va~Ga~~~  323 (335)
T PRK13929        296 EWLSEEIVV--------PVHVAANPLESVAIGTGRS  323 (335)
T ss_pred             HHHHHHHCC--------CceeCCCHHHHHHHHHHHH
Confidence            999999932        2333567889999998776

>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes

Probab=100.00  E-value=3.6e-33  Score=255.95  Aligned_cols=305  Identities=19%  Similarity=0.276  Sum_probs=219.7

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcc----cCcceeeccccCCccCCHHH
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~d~~~   83 (377)
                      +.+.||+||.+|++ |..+..=.+..||+++..+..       ..-..+|++|..+    .....+.+|+++|.|.|++.
T Consensus         2 ~~igIDLGT~~t~i-~~~~~Giv~~epSvVA~~~~~-------~~i~avG~~A~~m~gktp~~i~~~~Pl~~GvI~D~~~   73 (326)
T PF06723_consen    2 KDIGIDLGTSNTRI-YVKGKGIVLNEPSVVAYDKDT-------GKILAVGDEAKAMLGKTPDNIEVVRPLKDGVIADYEA   73 (326)
T ss_dssp             SEEEEEE-SSEEEE-EETTTEEEEEEES-EEEETTT---------EEEESHHHHTTTTS-GTTEEEE-SEETTEESSHHH
T ss_pred             CceEEecCcccEEE-EECCCCEEEecCcEEEEECCC-------CeEEEEhHHHHHHhhcCCCccEEEccccCCcccCHHH
Confidence            46899999999999 444444344568888876653       2335689999776    35678999999999999999


Q ss_pred             HHHHHHHhccccccc-CCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeC
Q 017089           84 MEKIWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDS  157 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~-~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi  157 (377)
                      .+.++++++++..+. ......++++.|...+..+|+.+.+.+ ..+|+..|+++++|+|||+++|.     ...+||||
T Consensus        74 ~~~~l~~~l~k~~~~~~~~~p~vvi~vP~~~T~verrA~~~a~-~~aGa~~V~li~ep~AaAiGaGl~i~~~~g~miVDI  152 (326)
T PF06723_consen   74 AEEMLRYFLKKALGRRSFFRPRVVICVPSGITEVERRALIDAA-RQAGARKVYLIEEPIAAAIGAGLDIFEPRGSMIVDI  152 (326)
T ss_dssp             HHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHH-HHTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEEEE
T ss_pred             HHHHHHHHHHHhccCCCCCCCeEEEEeCCCCCHHHHHHHHHHH-HHcCCCEEEEecchHHHHhcCCCCCCCCCceEEEEE
Confidence            999999999666654 345667999999999999999999998 56999999999999999999985     47899999


Q ss_pred             CCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCC
Q 017089          158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSA  237 (377)
Q Consensus       158 G~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~  237 (377)
                      |+++|+++.+..|.++  ....+++||+++++.+.+++++++ ++.  .....+|++|++++++....++.  ...    
T Consensus       153 G~GtTdiavislggiv--~s~si~~gG~~~DeaI~~~ir~~y-~l~--Ig~~tAE~iK~~~g~~~~~~~~~--~~~----  221 (326)
T PF06723_consen  153 GGGTTDIAVISLGGIV--ASRSIRIGGDDIDEAIIRYIREKY-NLL--IGERTAEKIKIEIGSASPPEEEE--SME----  221 (326)
T ss_dssp             -SS-EEEEEEETTEEE--EEEEES-SHHHHHHHHHHHHHHHH-SEE----HHHHHHHHHHH-BSS--HHHH--EEE----
T ss_pred             CCCeEEEEEEECCCEE--EEEEEEecCcchhHHHHHHHHHhh-Ccc--cCHHHHHHHHHhcceeeccCCCc--eEE----
Confidence            9999999999999998  667899999999999999998654 332  25688999999999876443222  110    


Q ss_pred             cceEEEcCCCcE--EeeC-CccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcC-cccccCCcCCcChHH
Q 017089          238 VEKSYELPDGQV--ITIG-AERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGN-IVLSGGSTMFPGIAD  313 (377)
Q Consensus       238 ~~~~~~~p~~~~--i~i~-~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~n-Iil~GG~s~i~gl~~  313 (377)
                       -.--.+-+|..  +.++ .+-..+.+..+.+         +.+.|.++|.++|+++..++++| |+||||+|+++||.+
T Consensus       222 -v~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~---------I~~~i~~~Le~~pPel~~DI~~~GI~LtGGga~l~Gl~~  291 (326)
T PF06723_consen  222 -VRGRDLITGLPKSIEITSSEVREAIEPPVDQ---------IVEAIKEVLEKTPPELAADILENGIVLTGGGALLRGLDE  291 (326)
T ss_dssp             -EEEEETTTTCEEEEEEEHHHHHHHHHHHHHH---------HHHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHH
T ss_pred             -EECccccCCCcEEEEEcHHHHHHHHHHHHHH---------HHHHHHHHHHhCCHHHHHHHHHCCEEEEChhhhhccHHH
Confidence             01112223322  2233 2333343444444         89999999999999999887765 999999999999999


Q ss_pred             HHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017089          314 RMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       314 rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +|++++        .++|...++|.+++-.|+..+..
T Consensus       292 ~i~~~~--------~~pV~va~~P~~~va~G~~~~l~  320 (326)
T PF06723_consen  292 YISEET--------GVPVRVADDPLTAVARGAGKLLE  320 (326)
T ss_dssp             HHHHHH--------SS-EEE-SSTTTHHHHHHHHTTC
T ss_pred             HHHHHH--------CCCEEEcCCHHHHHHHHHHHHHh
Confidence            999999        35566677889999999877654

In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.

>PRK13928 rod shape-determining protein Mbl; Provisional

Probab=99.98  E-value=1.3e-31  Score=251.76  Aligned_cols=306  Identities=18%  Similarity=0.273  Sum_probs=220.1

Q ss_pred             EEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhccc----CcceeeccccCCccCCHHHHH
Q 017089           10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDDME   85 (377)
Q Consensus        10 vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~d~~~~~   85 (377)
                      +.||+||.++++... +..-.+..||.++.....       +.-..+|+++....    ....+.+|+++|.+.||+..+
T Consensus         6 ~gIDlGt~~~~i~~~-~~~~v~~~psvv~~~~~~-------~~i~~vG~~A~~~~~~~p~~~~~~~pi~~G~i~d~~~~~   77 (336)
T PRK13928          6 IGIDLGTANVLVYVK-GKGIVLNEPSVVAIDKNT-------NKVLAVGEEARRMVGRTPGNIVAIRPLRDGVIADYDVTE   77 (336)
T ss_pred             eEEEcccccEEEEEC-CCCEEEccCCEEEEECCC-------CeEEEecHHHHHhhhcCCCCEEEEccCCCCeEecHHHHH
Confidence            999999999999655 333334568888765332       12347899987652    455678999999999999999


Q ss_pred             HHHHHhcccccccC-CCCCc-EEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCC
Q 017089           86 KIWHHTFYNELRVA-PEEHP-VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSG  158 (377)
Q Consensus        86 ~~~~~~~~~~L~~~-~~~~~-vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG  158 (377)
                      .+|++++ +.+... ...+| +++++|..++...|+. ++.+++.+|++.+.++++|+||++++|.     .+++|||+|
T Consensus        78 ~~l~~~~-~~~~~~~~~~~p~~vitvP~~~~~~~r~~-~~~a~~~ag~~~~~li~ep~Aaa~~~g~~~~~~~~~lVvDiG  155 (336)
T PRK13928         78 KMLKYFI-NKACGKRFFSKPRIMICIPTGITSVEKRA-VREAAEQAGAKKVYLIEEPLAAAIGAGLDISQPSGNMVVDIG  155 (336)
T ss_pred             HHHHHHH-HHHhccCCCCCCeEEEEeCCCCCHHHHHH-HHHHHHHcCCCceEecccHHHHHHHcCCcccCCCeEEEEEeC
Confidence            9999998 444332 34566 8889988877665555 5555699999999999999999999986     679999999


Q ss_pred             CCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCc
Q 017089          159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAV  238 (377)
Q Consensus       159 ~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~  238 (377)
                      +++|+++++..|..+.  ....++||+++++.+.+++..+. .+.  ...+.++++|++++.+..+..++  ..... ..
T Consensus       156 ggttdvsvv~~g~~~~--~~~~~lGG~did~~i~~~l~~~~-~~~--~~~~~ae~lK~~~~~~~~~~~~~--~~~v~-g~  227 (336)
T PRK13928        156 GGTTDIAVLSLGGIVT--SSSIKVAGDKFDEAIIRYIRKKY-KLL--IGERTAEEIKIKIGTAFPGAREE--EMEIR-GR  227 (336)
T ss_pred             CCeEEEEEEEeCCEEE--eCCcCCHHHHHHHHHHHHHHHHh-chh--cCHHHHHHHHHHhcccccccCCc--EEEEe-cc
Confidence            9999999999997763  34679999999999999986432 221  13457999999998764331100  00000 00


Q ss_pred             ceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhc-CcccccCCcCCcChHHHHHH
Q 017089          239 EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIADRMSK  317 (377)
Q Consensus       239 ~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~-nIil~GG~s~i~gl~~rl~~  317 (377)
                      .....+|.  .+.++.+++.  |+++.+      ...+.+.|.+++.+++.+.+...++ +|+||||+|++||+.++|++
T Consensus       228 ~~~~~~~~--~~~i~~~~~~--eii~~~------~~~i~~~i~~~l~~~~~~~~~~~i~~~IvL~GG~s~ipgi~e~l~~  297 (336)
T PRK13928        228 DLVTGLPK--TITVTSEEIR--EALKEP------VSAIVQAVKSVLERTPPELSADIIDRGIIMTGGGALLHGLDKLLAE  297 (336)
T ss_pred             cccCCCce--EEEECHHHHH--HHHHHH------HHHHHHHHHHHHHhCCccccHhhcCCCEEEECcccchhhHHHHHHH
Confidence            00001111  2344444433  444433      1237888899999998888888888 79999999999999999999


Q ss_pred             HHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       318 eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ++..        .+....+|..++-.||++++.-
T Consensus       298 ~~~~--------~v~~~~~P~~ava~Gaa~~~~~  323 (336)
T PRK13928        298 ETKV--------PVYIAEDPISCVALGTGKMLEN  323 (336)
T ss_pred             HHCC--------CceecCCHHHHHHHHHHHHHhc
Confidence            9932        2333457899999999998653

>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]

Probab=99.94  E-value=1e-26  Score=205.58  Aligned_cols=313  Identities=18%  Similarity=0.228  Sum_probs=226.7

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcc----cCcceeeccccCCccCCHH
Q 017089            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWD   82 (377)
Q Consensus         7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~d~~   82 (377)
                      .+.+.||+||.+|++- .-+..--...||.++......     ...-..+|++|..+    .+.....+|+++|+|.|++
T Consensus         6 s~diGIDLGTanTlV~-~k~kgIVl~ePSVVAi~~~~~-----~~~v~aVG~eAK~MlGrTP~ni~aiRPmkdGVIAd~~   79 (342)
T COG1077           6 SNDIGIDLGTANTLVY-VKGKGIVLNEPSVVAIESEGK-----TKVVLAVGEEAKQMLGRTPGNIVAIRPMKDGVIADFE   79 (342)
T ss_pred             cccceeeecccceEEE-EcCceEEecCceEEEEeecCC-----CceEEEehHHHHHHhccCCCCceEEeecCCcEeecHH
Confidence            4589999999999994 433433346688887755311     12346799999887    3566789999999999999


Q ss_pred             HHHHHHHHhcccccccC--CCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEE
Q 017089           83 DMEKIWHHTFYNELRVA--PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVL  155 (377)
Q Consensus        83 ~~~~~~~~~~~~~L~~~--~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVV  155 (377)
                      ..+.+++|.+++..+-.  ...-+++++.|.-.+.-.|+.+.+.+ +..+...|+++++|.+|+++.|.     +...||
T Consensus        80 ~te~ml~~fik~~~~~~~~~~~prI~i~vP~g~T~VErrAi~ea~-~~aGa~~V~lieEp~aAAIGaglpi~ep~G~mvv  158 (342)
T COG1077          80 VTELMLKYFIKKVHKNGSSFPKPRIVICVPSGITDVERRAIKEAA-ESAGAREVYLIEEPMAAAIGAGLPIMEPTGSMVV  158 (342)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCcEEEEecCCccHHHHHHHHHHH-HhccCceEEEeccHHHHHhcCCCcccCCCCCEEE
Confidence            99999999985444222  23445899999999999999999988 77999999999999999999986     358999


Q ss_pred             eCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccC
Q 017089          156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS  235 (377)
Q Consensus       156 DiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~  235 (377)
                      |||+++|+|+.+..|-++  ...+..+||+.+++.+.+++++++--..   ..+.++++|.+.+++..+...+..+... 
T Consensus       159 DIGgGTTevaVISlggiv--~~~Sirv~GD~~De~Ii~yvr~~~nl~I---Ge~taE~iK~eiG~a~~~~~~~~~~~eV-  232 (342)
T COG1077         159 DIGGGTTEVAVISLGGIV--SSSSVRVGGDKMDEAIIVYVRKKYNLLI---GERTAEKIKIEIGSAYPEEEDEELEMEV-  232 (342)
T ss_pred             EeCCCceeEEEEEecCEE--EEeeEEEecchhhHHHHHHHHHHhCeee---cHHHHHHHHHHhcccccccCCccceeeE-
Confidence            999999999999998888  5567899999999999999976432222   3467999999999886532211000000 


Q ss_pred             CCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcC-cccccCCcCCcChHHH
Q 017089          236 SAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGN-IVLSGGSTMFPGIADR  314 (377)
Q Consensus       236 ~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~n-Iil~GG~s~i~gl~~r  314 (377)
                      .......-+|.  .+.++.+.  +.|.|-.+      ...|.+.|...+.++|.++-.+..++ |++|||+|++.||.+.
T Consensus       233 ~Grdl~~GlPk--~i~i~s~e--v~eal~~~------v~~Iveair~~Le~tpPeL~~DI~ergivltGGGalLrglD~~  302 (342)
T COG1077         233 RGRDLVTGLPK--TITINSEE--IAEALEEP------LNGIVEAIRLVLEKTPPELAADIVERGIVLTGGGALLRGLDRL  302 (342)
T ss_pred             EeeecccCCCe--eEEEcHHH--HHHHHHHH------HHHHHHHHHHHHhhCCchhcccHhhCceEEecchHHhcCchHh
Confidence            00000001111  12222211  11222111      23488888899999999999999999 9999999999999999


Q ss_pred             HHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017089          315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       315 l~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +.++.        .+.++-.++|-..+-+|+.....
T Consensus       303 i~~et--------~~pv~ia~~pL~~Va~G~G~~le  330 (342)
T COG1077         303 LSEET--------GVPVIIADDPLTCVAKGTGKALE  330 (342)
T ss_pred             HHhcc--------CCeEEECCChHHHHHhccchhhh
Confidence            99887        45566667787777777655433

>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein

Probab=99.88  E-value=5.6e-22  Score=176.57  Aligned_cols=210  Identities=16%  Similarity=0.182  Sum_probs=159.3

Q ss_pred             eccccCCccCCHHHHHHHHHHhcccc-cccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccC
Q 017089           70 KYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG  148 (377)
Q Consensus        70 ~~p~~~g~i~d~~~~~~~~~~~~~~~-L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g  148 (377)
                      ..|+++|.|.|++..+.+++++.... -.....-..+++++|..++..+|+.+.+.+ +..|++.+.++++|+|++.+++
T Consensus        28 ~~~~~~g~I~d~~~~~~~l~~l~~~a~~~~g~~~~~vvisVP~~~~~~~r~a~~~a~-~~aGl~~~~li~ep~Aaa~~~~  106 (239)
T TIGR02529        28 ADVVRDGIVVDFLGAVEIVRRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVI-ESAGIEVLHVLDEPTAAAAVLQ  106 (239)
T ss_pred             cccccCCeEEEhHHHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCcccHHHHHHHH-HHcCCceEEEeehHHHHHHHhc
Confidence            57899999999999999999997321 111233467999999999999999888776 7799999999999999999988


Q ss_pred             CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHH
Q 017089          149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE  228 (377)
Q Consensus       149 ~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~  228 (377)
                      ....+|||+|+++|+++.+.+|.++  .....++||+++++.+.+.+.   .      +.+.+|++|.+++.-     ++
T Consensus       107 ~~~~~vvDiGggtt~i~i~~~G~i~--~~~~~~~GG~~it~~Ia~~~~---i------~~~~AE~~K~~~~~~-----~~  170 (239)
T TIGR02529       107 IKNGAVVDVGGGTTGISILKKGKVI--YSADEPTGGTHMSLVLAGAYG---I------SFEEAEEYKRGHKDE-----EE  170 (239)
T ss_pred             CCCcEEEEeCCCcEEEEEEECCeEE--EEEeeecchHHHHHHHHHHhC---C------CHHHHHHHHHhcCCH-----HH
Confidence            8888999999999999999999887  456789999999999876662   2      346788999876521     11


Q ss_pred             HHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCC
Q 017089          229 LETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF  308 (377)
Q Consensus       229 ~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i  308 (377)
                      ..                           ...+.+.         ..+.+.|.+++.+.+.       +.|+||||+|++
T Consensus       171 ~~---------------------------~~i~~~~---------~~i~~~i~~~l~~~~~-------~~v~LtGG~a~i  207 (239)
T TIGR02529       171 IF---------------------------PVVKPVY---------QKMASIVKRHIEGQGV-------KDLYLVGGACSF  207 (239)
T ss_pred             HH---------------------------HHHHHHH---------HHHHHHHHHHHHhCCC-------CEEEEECchhcc
Confidence            10                           0001111         1144455555554433       479999999999


Q ss_pred             cChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhh
Q 017089          309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI  347 (377)
Q Consensus       309 ~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi  347 (377)
                      ||+.++|++.+.        +++..+.+|.+++-.|+++
T Consensus       208 pgl~e~l~~~lg--------~~v~~~~~P~~~va~Gaa~  238 (239)
T TIGR02529       208 SGFADVFEKQLG--------LNVIKPQHPLYVTPLGIAM  238 (239)
T ss_pred             hhHHHHHHHHhC--------CCcccCCCCCeehhheeec
Confidence            999999999883        2334467889999999864

>PRK15080 ethanolamine utilization protein EutJ; Provisional

Probab=99.83  E-value=1.8e-19  Score=163.30  Aligned_cols=243  Identities=15%  Similarity=0.140  Sum_probs=173.7

Q ss_pred             CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHHH
Q 017089            5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM   84 (377)
Q Consensus         5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~   84 (377)
                      ...-.++||+||+++|+=.+ +..+.     .++                 +|+         ....+++.|.+.|++..
T Consensus        22 ~~~~~~~iDiGSssi~~vv~-~~~~~-----~~~-----------------~~~---------~~~~~vr~G~i~di~~a   69 (267)
T PRK15080         22 ESPLKVGVDLGTANIVLAVL-DEDGQ-----PVA-----------------GAL---------EWADVVRDGIVVDFIGA   69 (267)
T ss_pred             CCCEEEEEEccCceEEEEEE-cCCCC-----EEE-----------------EEe---------ccccccCCCEEeeHHHH
Confidence            45567999999999997554 32222     111                 221         23568899999999999


Q ss_pred             HHHHHHhccc---ccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCc
Q 017089           85 EKIWHHTFYN---ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  161 (377)
Q Consensus        85 ~~~~~~~~~~---~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~  161 (377)
                      .+.++++...   .++..  -..++++.|......++..+.+.+ +..|++...++.+|.+++.+++...++|||||+++
T Consensus        70 ~~~i~~~~~~ae~~~g~~--i~~v~~~vp~~~~~~~~~~~~~~~-~~aGl~~~~ii~e~~A~a~~~~~~~~~vvDIGggt  146 (267)
T PRK15080         70 VTIVRRLKATLEEKLGRE--LTHAATAIPPGTSEGDPRAIINVV-ESAGLEVTHVLDEPTAAAAVLGIDNGAVVDIGGGT  146 (267)
T ss_pred             HHHHHHHHHHHHHHhCCC--cCeEEEEeCCCCCchhHHHHHHHH-HHcCCceEEEechHHHHHHHhCCCCcEEEEeCCCc
Confidence            8888888631   33332  456788899888777788777554 88999999999999999998877778999999999


Q ss_pred             eEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceE
Q 017089          162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS  241 (377)
Q Consensus       162 t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~  241 (377)
                      |+++.+.+|.++  .....++||+++++.+.+.+.   .      +.+.+|++|.+...     .++..           
T Consensus       147 t~i~v~~~g~~~--~~~~~~~GG~~it~~Ia~~l~---i------~~~eAE~lK~~~~~-----~~~~~-----------  199 (267)
T PRK15080        147 TGISILKDGKVV--YSADEPTGGTHMSLVLAGAYG---I------SFEEAEQYKRDPKH-----HKEIF-----------  199 (267)
T ss_pred             EEEEEEECCeEE--EEecccCchHHHHHHHHHHhC---C------CHHHHHHHHhccCC-----HHHHH-----------
Confidence            999999999887  446789999999999987762   2      34668888876531     00000           


Q ss_pred             EEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHh
Q 017089          242 YELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITA  321 (377)
Q Consensus       242 ~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~  321 (377)
                                      .+.+.+++.         +.+.|.+.+.+.       -.+.|+||||+|++||+.+.+++.+..
T Consensus       200 ----------------~ii~~~~~~---------i~~~i~~~l~~~-------~~~~IvLtGG~s~lpgl~e~l~~~lg~  247 (267)
T PRK15080        200 ----------------PVVKPVVEK---------MASIVARHIEGQ-------DVEDIYLVGGTCCLPGFEEVFEKQTGL  247 (267)
T ss_pred             ----------------HHHHHHHHH---------HHHHHHHHHhcC-------CCCEEEEECCcccchhHHHHHHHHhCC
Confidence                            000111111         334444444432       346899999999999999999999832


Q ss_pred             hCCCCceEEEECCCCCccccchhhhhhh
Q 017089          322 LAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       322 ~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                              .+..+++|.++.-.|+++|+
T Consensus       248 --------~v~~~~~P~~~~a~Gaa~~~  267 (267)
T PRK15080        248 --------PVHKPQHPLFVTPLGIALSC  267 (267)
T ss_pred             --------CcccCCCchHHHHHHHHhhC
Confidence                    22336788999999998874

>TIGR01991 HscA Fe-S protein assembly chaperone HscA

Probab=99.82  E-value=5.7e-20  Score=184.46  Aligned_cols=297  Identities=21%  Similarity=0.225  Sum_probs=182.4

Q ss_pred             cEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhccc------Ccceee----
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR------GILTLK----   70 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~------~~~~~~----   70 (377)
                      +|.||+||+++.+++..+..|.        ..+||+++...+         ....||..|....      ....++    
T Consensus         1 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~---------~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG   71 (599)
T TIGR01991         1 AVGIDLGTTNSLVASVRSGVPEVLPDAEGRVLLPSVVRYLKD---------GGVEVGKEALAAAAEDPKNTISSVKRLMG   71 (599)
T ss_pred             CEEEEEccccEEEEEEECCEEEEEECCCCCcccCeEEEEeCC---------CCEEecHHHHHhhhhChhhhHHHHHHHhC
Confidence            4899999999999997654443        245666655322         2456777664320      000000    


Q ss_pred             -----------ccc--------------cCCccCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHH
Q 017089           71 -----------YPI--------------EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMT  122 (377)
Q Consensus        71 -----------~p~--------------~~g~i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~  122 (377)
                                 +|+              ..+.+...+....+++++..   ..++.  .-..+|+++|..++..+|+.+.
T Consensus        72 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ei~a~iL~~lk~~a~~~lg~--~v~~~VItVPa~f~~~qR~a~~  149 (599)
T TIGR01991        72 RSIEDIKTFSILPYRFVDGPGEMVRLRTVQGTVTPVEVSAEILKKLKQRAEESLGG--DLVGAVITVPAYFDDAQRQATK  149 (599)
T ss_pred             CCccchhhcccCCEEEEEcCCCceEEEeCCCEEcHHHHHHHHHHHHHHHHHHHhCC--CcceEEEEECCCCCHHHHHHHH
Confidence                       122              12233334445555555531   23332  2457999999999999999988


Q ss_pred             hhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHHHH
Q 017089          123 QIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKI  194 (377)
Q Consensus       123 ~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~~~  194 (377)
                      +.+ +.+|++.+.++++|+||+++++.     .+.+|+|+|+++++|+.+.  +|.. +..+.....+||.++++.|.++
T Consensus       150 ~Aa-~~AGl~v~~li~EPtAAAlay~~~~~~~~~vlV~DlGgGT~DvSi~~~~~~~~~vla~~gd~~lGG~d~D~~l~~~  228 (599)
T TIGR01991       150 DAA-RLAGLNVLRLLNEPTAAAVAYGLDKASEGIYAVYDLGGGTFDVSILKLTKGVFEVLATGGDSALGGDDFDHALAKW  228 (599)
T ss_pred             HHH-HHcCCCceEEecCHHHHHHHHhhccCCCCEEEEEEcCCCeEEEEEEEEcCCeEEEEEEcCCCCCCHHHHHHHHHHH
Confidence            887 88999999999999999998863     4689999999999999775  3322 1112234589999999999999


Q ss_pred             HHHc-CCCccchhH-----HHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEe--eCCcccc-ccccCCC
Q 017089          195 LTER-GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVIT--IGAERFR-CPEVLFQ  265 (377)
Q Consensus       195 l~~~-~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~--i~~~~~~-~~E~lf~  265 (377)
                      +.++ +.+......     ...++..|+.++.-              ......+.. +|..+.  ++.+.|. +.+.+++
T Consensus       229 l~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~--------------~~~~i~i~~-~g~~~~~~itr~efe~l~~~ll~  293 (599)
T TIGR01991       229 ILKQLGISADLNPEDQRLLLQAARAAKEALTDA--------------ESVEVDFTL-DGKDFKGKLTRDEFEALIQPLVQ  293 (599)
T ss_pred             HHHhhCCCCCCCHHHHHHHHHHHHHHHHhCCCC--------------ceEEEEEEE-CCcEEEEEEeHHHHHHHHHHHHH
Confidence            8754 333211111     12344555544321              111222222 333333  3333331 2222222


Q ss_pred             CccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhh
Q 017089          266 PSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG  345 (377)
Q Consensus       266 p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Ga  345 (377)
                      .         +.+.|.+++....  +...-++.|+|+||+|++|++++.+++.+..        .+....+|+.++-.||
T Consensus       294 ~---------i~~~i~~~L~~a~--~~~~~id~ViLvGGssriP~V~~~l~~~f~~--------~~~~~~npdeaVA~GA  354 (599)
T TIGR01991       294 K---------TLSICRRALRDAG--LSVEEIKGVVLVGGSTRMPLVRRAVAELFGQ--------EPLTDIDPDQVVALGA  354 (599)
T ss_pred             H---------HHHHHHHHHHHcC--CChhhCCEEEEECCcCCChHHHHHHHHHhCC--------CCCCCCCCcHHHHHHH
Confidence            2         4444555554432  2344568899999999999999999877632        1233568899999999


Q ss_pred             hhhhcc
Q 017089          346 SILASL  351 (377)
Q Consensus       346 si~a~l  351 (377)
                      +++|..
T Consensus       355 ai~a~~  360 (599)
T TIGR01991       355 AIQADL  360 (599)
T ss_pred             HHHHHH
Confidence            999875

The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.

>CHL00094 dnaK heat shock protein 70

Probab=99.82  E-value=1.1e-19  Score=183.61  Aligned_cols=297  Identities=19%  Similarity=0.217  Sum_probs=181.4

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhcc------cCcceeec--
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKY--   71 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~--   71 (377)
                      ..|.||+||+++++++..+..|.        ..+||+++...         +...++|+.|...      .....+++  
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~---------~~~~~vG~~A~~~~~~~p~~ti~~~Krli   73 (621)
T CHL00094          3 KVVGIDLGTTNSVVAVMEGGKPTVIPNAEGFRTTPSIVAYTK---------KGDLLVGQIAKRQAVINPENTFYSVKRFI   73 (621)
T ss_pred             ceEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEcC---------CCCEEECHHHHHhHHhCccceehhhHHhc
Confidence            58999999999999998665554        23455554422         2234566655331      00000111  


Q ss_pred             --------------cc----------------cCCccCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017089           72 --------------PI----------------EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR  118 (377)
Q Consensus        72 --------------p~----------------~~g~i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~  118 (377)
                                    |+                ....+...+....+++++..   ..++  ..-..+|+++|..++..+|
T Consensus        74 G~~~~~~~~~~~~~~~~v~~~~~g~i~~~~~~~~~~~s~eei~a~iL~~l~~~ae~~lg--~~v~~~VItVPa~f~~~qR  151 (621)
T CHL00094         74 GRKFSEISEEAKQVSYKVKTDSNGNIKIECPALNKDFSPEEISAQVLRKLVEDASKYLG--ETVTQAVITVPAYFNDSQR  151 (621)
T ss_pred             CCChHHHHhhhhcCCeEEEECCCCCEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence                          11                11122334455566666542   1232  2235699999999999999


Q ss_pred             HHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCCccc---ccceEEecccHHHHHHH
Q 017089          119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYAL---PHAILRLDLAGRDLTDA  190 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g~~~---~~~~~~~~~GG~~l~~~  190 (377)
                      +.+.+.+ +..|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+..+...   ..+....++||.++++.
T Consensus       152 ~a~~~Aa-~~AGl~v~~li~EptAAAlay~~~~~~~~~vlV~DlGgGT~DvSv~~~~~~~~~vla~~gd~~lGG~d~D~~  230 (621)
T CHL00094        152 QATKDAG-KIAGLEVLRIINEPTAASLAYGLDKKNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDKK  230 (621)
T ss_pred             HHHHHHH-HHcCCceEEEeccHHHHHHHhccccCCCCEEEEEEcCCCeEEEEEEEEcCCEEEEEEEecCCCcChHHHHHH
Confidence            9988877 78999999999999999998874     468999999999999988654222   12233468999999999


Q ss_pred             HHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC------CC-cEE--e
Q 017089          191 LMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG-QVI--T  251 (377)
Q Consensus       191 l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------~~-~~i--~  251 (377)
                      |.+++.++     +.++....     -...++++|+.++...                ...+.+|      +| ..+  .
T Consensus       231 l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~----------------~~~i~i~~~~~~~~g~~~~~~~  294 (621)
T CHL00094        231 IVNWLIKEFKKKEGIDLSKDRQALQRLTEAAEKAKIELSNLT----------------QTEINLPFITATQTGPKHIEKT  294 (621)
T ss_pred             HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCC----------------ceEEEEeecccCCCCCeeEEEE
Confidence            99887543     22222110     1234666676665311                1111111      01 122  2


Q ss_pred             eCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEE
Q 017089          252 IGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIK  330 (377)
Q Consensus       252 i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~  330 (377)
                      +..++|. ..+.++..         +.+.|.+++.+.  .+...-++.|+|+||+|++|++++.+++.+..        +
T Consensus       295 itR~~fe~l~~~l~~~---------~~~~i~~~L~~a--~~~~~~i~~ViLvGGssriP~v~~~l~~~fg~--------~  355 (621)
T CHL00094        295 LTRAKFEELCSDLINR---------CRIPVENALKDA--KLDKSDIDEVVLVGGSTRIPAIQELVKKLLGK--------K  355 (621)
T ss_pred             EcHHHHHHHHHHHHHH---------HHHHHHHHHHHc--CCChhhCcEEEEECCccCChHHHHHHHHHhCC--------C
Confidence            3333222 11212111         333444555443  23344568899999999999999999877632        2


Q ss_pred             EECCCCCccccchhhhhhhcc
Q 017089          331 VVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       331 v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +....+|+.++..||+++|..
T Consensus       356 ~~~~~~pdeava~GAA~~aa~  376 (621)
T CHL00094        356 PNQSVNPDEVVAIGAAVQAGV  376 (621)
T ss_pred             cCcCCCchhHHHhhhHHHHHH
Confidence            334457889999999999874

>PTZ00400 DnaK-type molecular chaperone; Provisional

Probab=99.81  E-value=2e-19  Score=182.26  Aligned_cols=216  Identities=18%  Similarity=0.228  Sum_probs=143.3

Q ss_pred             CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEee--CCcc-c
Q 017089          102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-L  173 (377)
Q Consensus       102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~--~g~~-~  173 (377)
                      -..+|+++|..++..+|+.+.+.+ +..|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+.  +|.. +
T Consensus       174 v~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~v~~li~EptAAAlay~~~~~~~~~vlV~DlGgGT~DvSv~~~~~g~~~v  252 (663)
T PTZ00400        174 VKQAVITVPAYFNDSQRQATKDAG-KIAGLDVLRIINEPTAAALAFGMDKNDGKTIAVYDLGGGTFDISILEILGGVFEV  252 (663)
T ss_pred             CceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEeCchHHHHHHhccccCCCcEEEEEeCCCCeEEEEEEEecCCeeEE
Confidence            457999999999999999988877 88999999999999999999875     4789999999999999774  4533 2


Q ss_pred             ccceEEecccHHHHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEE-
Q 017089          174 PHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY-  242 (377)
Q Consensus       174 ~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~-  242 (377)
                      .......++||.++++.|.+++..+     +.++....     -...+++.|+.++.-.              .....+ 
T Consensus       253 ~a~~gd~~LGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~~--------------~~~i~i~  318 (663)
T PTZ00400        253 KATNGNTSLGGEDFDQRILNYLIAEFKKQQGIDLKKDKLALQRLREAAETAKIELSSKT--------------QTEINLP  318 (663)
T ss_pred             EecccCCCcCHHHHHHHHHHHHHHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHcCCCC--------------ceEEEEE
Confidence            2223346899999999999888643     22221110     0223566666654210              011111 


Q ss_pred             -EcCC--C-c--EEeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHH
Q 017089          243 -ELPD--G-Q--VITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM  315 (377)
Q Consensus       243 -~~p~--~-~--~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl  315 (377)
                       ...|  | .  .+.++.+.|. ..+.+|..         +.+.|.+++.+..  +.+.-++.|+|+||+|++|++++.|
T Consensus       319 ~~~~d~~g~~~~~~~itR~efe~l~~~l~~~---------~~~~i~~~L~~a~--~~~~~i~~ViLvGGssriP~v~~~l  387 (663)
T PTZ00400        319 FITADQSGPKHLQIKLSRAKLEELTHDLLKK---------TIEPCEKCIKDAG--VKKDELNDVILVGGMTRMPKVSETV  387 (663)
T ss_pred             eeccCCCCceEEEEEECHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CCHHHCcEEEEECCccCChHHHHHH
Confidence             1111  1 1  2333333332 22223322         4555556665542  2344578999999999999999998


Q ss_pred             HHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          316 SKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       316 ~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ++.+..        .+....+|+.++-.||+++|..
T Consensus       388 ~~~f~~--------~~~~~~npdeaVA~GAAi~aa~  415 (663)
T PTZ00400        388 KKIFGK--------EPSKGVNPDEAVAMGAAIQAGV  415 (663)
T ss_pred             HHHhCC--------CcccCCCCccceeeccHHHHHh
Confidence            877632        2233557899999999999864

>PRK00290 dnaK molecular chaperone DnaK; Provisional

Probab=99.81  E-value=1.1e-19  Score=183.89  Aligned_cols=297  Identities=18%  Similarity=0.220  Sum_probs=180.3

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhccc------Ccceee---
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR------GILTLK---   70 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~------~~~~~~---   70 (377)
                      .+|.||+||+++++++..+..|.        ..+||+++...         +...++|+.|....      ....++   
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~---------~~~~~vG~~A~~~~~~~p~~~i~~~Kr~i   73 (627)
T PRK00290          3 KIIGIDLGTTNSCVAVMEGGEPKVIENAEGARTTPSVVAFTK---------DGERLVGQPAKRQAVTNPENTIFSIKRLM   73 (627)
T ss_pred             cEEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEeC---------CCCEEEcHHHHHhhhhCchhhHHHHHHHh
Confidence            47999999999999998655443        34456555432         22456776654320      001111   


Q ss_pred             -------------cccc-------------CCccCC-HHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHH
Q 017089           71 -------------YPIE-------------HGIVSN-WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREK  120 (377)
Q Consensus        71 -------------~p~~-------------~g~i~d-~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~  120 (377)
                                   +|++             .|.... .+....+++++..   ..++.  .-..+++++|..++..+|+.
T Consensus        74 G~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~--~v~~~VItVPa~f~~~qR~a  151 (627)
T PRK00290         74 GRRDEEVQKDIKLVPYKIVKADNGDAWVEIDGKKYTPQEISAMILQKLKKDAEDYLGE--KVTEAVITVPAYFNDAQRQA  151 (627)
T ss_pred             CCCchHHHHHhhcCCeEEEEcCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCC--CCceEEEEECCCCCHHHHHH
Confidence                         1110             122122 2334445554421   23332  23579999999999999999


Q ss_pred             HHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCCcc---cccceEEecccHHHHHHHHH
Q 017089          121 MTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYA---LPHAILRLDLAGRDLTDALM  192 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g~~---~~~~~~~~~~GG~~l~~~l~  192 (377)
                      +.+.+ +.+|++.+.++++|+||+++++.     .+.+|+|+|+++++++.+.-+..   +..+....++||.++++.|.
T Consensus       152 ~~~Aa-~~AGl~v~~li~EptAAAl~y~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~vla~~gd~~lGG~d~D~~l~  230 (627)
T PRK00290        152 TKDAG-KIAGLEVLRIINEPTAAALAYGLDKKGDEKILVYDLGGGTFDVSILEIGDGVFEVLSTNGDTHLGGDDFDQRII  230 (627)
T ss_pred             HHHHH-HHcCCceEEEecchHHHHHHhhhccCCCCEEEEEECCCCeEEEEEEEEeCCeEEEEEecCCCCcChHHHHHHHH
Confidence            88777 88999999999999999998864     56999999999999988754321   11222346899999999999


Q ss_pred             HHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEc----CC--C-c--EEeeC
Q 017089          193 KILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL----PD--G-Q--VITIG  253 (377)
Q Consensus       193 ~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~----p~--~-~--~i~i~  253 (377)
                      +++.++     +.++....     -...+++.|+.++.-.                ...+.+    .|  | .  .+.++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~~----------------~~~i~i~~~~~d~~g~~~~~~~it  294 (627)
T PRK00290        231 DYLADEFKKENGIDLRKDKMALQRLKEAAEKAKIELSSAQ----------------QTEINLPFITADASGPKHLEIKLT  294 (627)
T ss_pred             HHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------eEEEEEeecccCCCCCeEEEEEEC
Confidence            887543     22221110     0224555666554210                111111    11  1 1  23333


Q ss_pred             Ccccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEE
Q 017089          254 AERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVV  332 (377)
Q Consensus       254 ~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~  332 (377)
                      .+.|. ..+.++..         +.+.|.+++.....  ...-++.|+|+||+|++|.+++++++.+..        .+.
T Consensus       295 R~~fe~l~~~l~~~---------~~~~i~~~l~~a~~--~~~~id~ViLvGGssriP~v~~~l~~~fg~--------~~~  355 (627)
T PRK00290        295 RAKFEELTEDLVER---------TIEPCKQALKDAGL--SVSDIDEVILVGGSTRMPAVQELVKEFFGK--------EPN  355 (627)
T ss_pred             HHHHHHHHHHHHHH---------HHHHHHHHHHHcCC--ChhhCcEEEEECCcCCChHHHHHHHHHhCC--------CCC
Confidence            33332 22222222         44555555554432  234468899999999999999999877632        233


Q ss_pred             CCCCCccccchhhhhhhcc
Q 017089          333 APPERKYSVWIGGSILASL  351 (377)
Q Consensus       333 ~~~~~~~~~w~Gasi~a~l  351 (377)
                      ...+|+.++..||+++|..
T Consensus       356 ~~~npdeava~GAa~~aa~  374 (627)
T PRK00290        356 KGVNPDEVVAIGAAIQGGV  374 (627)
T ss_pred             cCcCChHHHHHhHHHHHHH
Confidence            4557899999999999864

>PLN03184 chloroplast Hsp70; Provisional

Probab=99.80  E-value=2.4e-19  Score=181.71  Aligned_cols=299  Identities=16%  Similarity=0.181  Sum_probs=181.8

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhcc------cCcceee---
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLK---   70 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~---   70 (377)
                      .+|.||+||+++++++..+..|.        ..+||+++...         +...++|+.|...      +..+.++   
T Consensus        40 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~---------~~~~~vG~~A~~~~~~~p~~ti~~~Krli  110 (673)
T PLN03184         40 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTK---------NGDRLVGQIAKRQAVVNPENTFFSVKRFI  110 (673)
T ss_pred             CEEEEEeCcCcEEEEEEECCeEEEEECCCCCeecceEEEEcC---------CCCEEECHHHHHhhhhCchhhhHHHHHhh
Confidence            47999999999999998665554        23455554422         2235566655432      0000010   


Q ss_pred             -------------ccc----------------cCCccCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017089           71 -------------YPI----------------EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR  118 (377)
Q Consensus        71 -------------~p~----------------~~g~i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~  118 (377)
                                   +|+                ....+...+....+++++..   ..++  ..-..+||++|..++..+|
T Consensus       111 G~~~~d~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~speei~a~iL~~lk~~ae~~lg--~~v~~~VITVPa~f~~~qR  188 (673)
T PLN03184        111 GRKMSEVDEESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLN--DKVTKAVITVPAYFNDSQR  188 (673)
T ss_pred             CCCcchhhhhhhcCCeEEEecCCCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence                         011                11223334555666666542   1232  2246799999999999999


Q ss_pred             HHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCCccc---ccceEEecccHHHHHHH
Q 017089          119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYAL---PHAILRLDLAGRDLTDA  190 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g~~~---~~~~~~~~~GG~~l~~~  190 (377)
                      +.+.+.+ +..|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+.-+...   ..+....++||.++++.
T Consensus       189 ~a~~~Aa-~~AGl~v~~li~EPtAAAlayg~~~~~~~~vlV~DlGgGT~DvSi~~~~~~~~eVla~~gd~~LGG~dfD~~  267 (673)
T PLN03184        189 TATKDAG-RIAGLEVLRIINEPTAASLAYGFEKKSNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKR  267 (673)
T ss_pred             HHHHHHH-HHCCCCeEEEeCcHHHHHHHhhcccCCCCEEEEEECCCCeEEEEEEEecCCEEEEEEecCCCccCHHHHHHH
Confidence            9988777 88999999999999999998864     478999999999999887533211   11223468999999999


Q ss_pred             HHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEE--Ec--CCC-cEE--eeC
Q 017089          191 LMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY--EL--PDG-QVI--TIG  253 (377)
Q Consensus       191 l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~--p~~-~~i--~i~  253 (377)
                      |.+++..+     +.+.....     -...+|+.|+.++...              .....+  ..  .++ ..+  .++
T Consensus       268 L~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~--------------~~~i~i~~~~~~~~g~~~~~~~it  333 (673)
T PLN03184        268 IVDWLASNFKKDEGIDLLKDKQALQRLTEAAEKAKIELSSLT--------------QTSISLPFITATADGPKHIDTTLT  333 (673)
T ss_pred             HHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHHHhcCCCC--------------cceEEEEeeeccCCCCceEEEEEC
Confidence            99888643     22221110     0234556666655321              011111  10  111 222  333


Q ss_pred             Ccccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEE
Q 017089          254 AERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVV  332 (377)
Q Consensus       254 ~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~  332 (377)
                      .+.|. ..+.+++.         +.+.|.+++.....  ...-++.|+|+||+|++|.++++|++.+..        .+.
T Consensus       334 R~~fe~l~~~l~~r---------~~~~i~~~L~~a~~--~~~dId~ViLvGGssriP~V~~~i~~~fg~--------~~~  394 (673)
T PLN03184        334 RAKFEELCSDLLDR---------CKTPVENALRDAKL--SFKDIDEVILVGGSTRIPAVQELVKKLTGK--------DPN  394 (673)
T ss_pred             HHHHHHHHHHHHHH---------HHHHHHHHHHHcCC--ChhHccEEEEECCccccHHHHHHHHHHhCC--------Ccc
Confidence            33332 22222222         44455555554432  234568999999999999999998877732        122


Q ss_pred             CCCCCccccchhhhhhhcc
Q 017089          333 APPERKYSVWIGGSILASL  351 (377)
Q Consensus       333 ~~~~~~~~~w~Gasi~a~l  351 (377)
                      ...+|+.++-.||+++|..
T Consensus       395 ~~~npdeaVA~GAAi~aa~  413 (673)
T PLN03184        395 VTVNPDEVVALGAAVQAGV  413 (673)
T ss_pred             cccCcchHHHHHHHHHHHH
Confidence            3447789999999999874

>PRK01433 hscA chaperone protein HscA; Provisional

Probab=99.80  E-value=4.9e-19  Score=176.75  Aligned_cols=226  Identities=16%  Similarity=0.183  Sum_probs=149.6

Q ss_pred             HHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceE
Q 017089           81 WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTG  152 (377)
Q Consensus        81 ~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~  152 (377)
                      .+....+++++-.   ..++  ..-..+|+++|..++..+|+.+.+.+ +..|++.+.++++|+||++++|.     .+.
T Consensus       119 eei~a~iL~~lk~~ae~~lg--~~v~~aVITVPa~f~~~qR~a~~~Aa-~~AGl~v~~li~EPtAAAlay~~~~~~~~~v  195 (595)
T PRK01433        119 PEIAAEIFIYLKNQAEEQLK--TNITKAVITVPAHFNDAARGEVMLAA-KIAGFEVLRLIAEPTAAAYAYGLNKNQKGCY  195 (595)
T ss_pred             HHHHHHHHHHHHHHHHHHhC--CCcceEEEEECCCCCHHHHHHHHHHH-HHcCCCEEEEecCcHHHHHHHhcccCCCCEE
Confidence            3444555555531   2233  22357999999999999999988876 88999999999999999999874     357


Q ss_pred             EEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHH
Q 017089          153 IVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL  229 (377)
Q Consensus       153 lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~  229 (377)
                      +|+|+|+++++|+.+.  +|.. +........+||.++++.|.+++..+...-......+.+++.|+.++.-.       
T Consensus       196 lV~DlGGGT~DvSi~~~~~~~~~V~at~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~ekaK~~LS~~~-------  268 (595)
T PRK01433        196 LVYDLGGGTFDVSILNIQEGIFQVIATNGDNMLGGNDIDVVITQYLCNKFDLPNSIDTLQLAKKAKETLTYKD-------  268 (595)
T ss_pred             EEEECCCCcEEEEEEEEeCCeEEEEEEcCCcccChHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCc-------
Confidence            9999999999998774  4422 11222345799999999999998754211111112334666666554210       


Q ss_pred             HHhccCCCcceEEEcCCCcEEeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCC
Q 017089          230 ETAKTSSAVEKSYELPDGQVITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF  308 (377)
Q Consensus       230 ~~~~~~~~~~~~~~~p~~~~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i  308 (377)
                                 .+..   ..+.++.+.|. ..+.+|+.         +.+.|.+++....    ..-++.|+|+||+|++
T Consensus       269 -----------~~~~---~~~~itr~efe~l~~~l~~~---------~~~~i~~~L~~a~----~~~Id~ViLvGGssri  321 (595)
T PRK01433        269 -----------SFNN---DNISINKQTLEQLILPLVER---------TINIAQECLEQAG----NPNIDGVILVGGATRI  321 (595)
T ss_pred             -----------cccc---ceEEEcHHHHHHHHHHHHHH---------HHHHHHHHHhhcC----cccCcEEEEECCcccC
Confidence                       0111   14445444432 22333322         4455555555443    2336889999999999


Q ss_pred             cChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       309 ~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      |.+++.+++.+.        .++..+.+|+.++-.||+++|..
T Consensus       322 P~v~~~l~~~f~--------~~~~~~~npdeaVA~GAAi~a~~  356 (595)
T PRK01433        322 PLIKDELYKAFK--------VDILSDIDPDKAVVWGAALQAEN  356 (595)
T ss_pred             hhHHHHHHHHhC--------CCceecCCchHHHHHHHHHHHHH
Confidence            999888887662        12344568899999999999875

>TIGR02350 prok_dnaK chaperone protein DnaK

Probab=99.80  E-value=1.5e-19  Score=182.40  Aligned_cols=296  Identities=18%  Similarity=0.226  Sum_probs=179.1

Q ss_pred             cEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhccc------Ccceeec---
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR------GILTLKY---   71 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~------~~~~~~~---   71 (377)
                      +|.||+||+++++++..+..|.        ..+||+++...         +...++|+.|....      ....+++   
T Consensus         2 viGIDlGtt~s~va~~~~g~~~ii~n~~~~~~~PS~V~~~~---------~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG   72 (595)
T TIGR02350         2 IIGIDLGTTNSCVAVMEGGEPVVIPNAEGARTTPSVVAFTK---------NGERLVGQPAKRQAVTNPENTIYSIKRFMG   72 (595)
T ss_pred             EEEEEeCcccEEEEEEECCEEEEEECCCCCcccCeEEEEeC---------CCCEEECHHHHHhhhhCchhhhHHHHHHhC
Confidence            6899999999999998655554        23455554422         22456777664320      0111111   


Q ss_pred             -------------ccc------------CCccCC-HHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHH
Q 017089           72 -------------PIE------------HGIVSN-WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMT  122 (377)
Q Consensus        72 -------------p~~------------~g~i~d-~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~  122 (377)
                                   |+.            .|.... .+....+++++..   ..++.  .-..+++++|..++..+|+.+.
T Consensus        73 ~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~peel~a~~L~~l~~~a~~~~~~--~v~~~VItVPa~f~~~qR~a~~  150 (595)
T TIGR02350        73 RRFDEVTEEAKRVPYKVVGDGGDVRVKVDGKEYTPQEISAMILQKLKKDAEAYLGE--KVTEAVITVPAYFNDAQRQATK  150 (595)
T ss_pred             CCchHHHHHhhcCCeeEEcCCCceEEEECCEEecHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHHH
Confidence                         110            111112 2333445555421   22332  2356999999999999999988


Q ss_pred             hhccccCCCCeEEeeecccccccccCC------ceEEEEeCCCCceEEEEeeCC--cc-cccceEEecccHHHHHHHHHH
Q 017089          123 QIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEG--YA-LPHAILRLDLAGRDLTDALMK  193 (377)
Q Consensus       123 ~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~~v~~g--~~-~~~~~~~~~~GG~~l~~~l~~  193 (377)
                      +.+ +.+|++.+.++++|+||+++++.      .+.+|+|+|+++++++.+.-+  .. +..+.....+||.++++.|.+
T Consensus       151 ~Aa-~~AGl~v~~li~EptAAAl~y~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~v~~~~gd~~lGG~d~D~~l~~  229 (595)
T TIGR02350       151 DAG-KIAGLEVLRIINEPTAAALAYGLDKSKKDEKILVFDLGGGTFDVSILEIGDGVFEVLSTAGDTHLGGDDFDQRIID  229 (595)
T ss_pred             HHH-HHcCCceEEEecchHHHHHHHhhcccCCCcEEEEEECCCCeEEEEEEEecCCeEEEEEecCCcccCchhHHHHHHH
Confidence            876 88999999999999999998763      468999999999999887432  11 112223457999999999998


Q ss_pred             HHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC----C--C-c--EEeeCC
Q 017089          194 ILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP----D--G-Q--VITIGA  254 (377)
Q Consensus       194 ~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p----~--~-~--~i~i~~  254 (377)
                      ++..+     +.++....     -...+++.|+.++...                ...+.+|    +  | .  .+.++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~----------------~~~i~i~~~~~~~~g~~~~~~~itr  293 (595)
T TIGR02350       230 WLADEFKKEEGIDLSKDKMALQRLKEAAEKAKIELSSVL----------------STEINLPFITADASGPKHLEMTLTR  293 (595)
T ss_pred             HHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEeeecccCCCCCeeEEEEEeH
Confidence            87532     22221110     0234566666654211                1111111    1  1 1  233333


Q ss_pred             cccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEEC
Q 017089          255 ERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVA  333 (377)
Q Consensus       255 ~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~  333 (377)
                      +.|. ..+.++..         +.+.|.+++.+..  +.+.-++.|+|+||+|++|.+.+.+++.+..        ++..
T Consensus       294 ~~fe~l~~~l~~~---------~~~~i~~~l~~a~--~~~~~i~~V~LvGGssriP~v~~~i~~~f~~--------~~~~  354 (595)
T TIGR02350       294 AKFEELTADLVER---------TKEPVRQALKDAG--LSASDIDEVILVGGSTRIPAVQELVKDFFGK--------EPNK  354 (595)
T ss_pred             HHHHHHHHHHHHH---------HHHHHHHHHHHcC--CCHhHCcEEEEECCcccChHHHHHHHHHhCC--------cccC
Confidence            3332 22222222         4445555554442  2234568899999999999999998876631        3344


Q ss_pred             CCCCccccchhhhhhhcc
Q 017089          334 PPERKYSVWIGGSILASL  351 (377)
Q Consensus       334 ~~~~~~~~w~Gasi~a~l  351 (377)
                      ..+|+.++..||+++|..
T Consensus       355 ~~~pdeava~GAa~~aa~  372 (595)
T TIGR02350       355 SVNPDEVVAIGAAIQGGV  372 (595)
T ss_pred             CcCcHHHHHHHHHHHHHH
Confidence            568899999999999864

Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.

>PRK13410 molecular chaperone DnaK; Provisional

Probab=99.79  E-value=5.4e-19  Score=178.70  Aligned_cols=297  Identities=18%  Similarity=0.204  Sum_probs=178.1

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhcc------cCcceeec--
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKY--   71 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~--   71 (377)
                      .+|.||+||+++++++..+..|.        ..+||+++...         ....+||..|...      +....+++  
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~---------~~~~~vG~~A~~~~~~~p~~ti~~~KRli   73 (668)
T PRK13410          3 RIVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFTK---------DGELLVGQLARRQLVLNPQNTFYNLKRFI   73 (668)
T ss_pred             cEEEEEeCCCcEEEEEEECCeEEEEECCCCCccCceEEEEeC---------CCCEEECHHHHHhhHhCccceehHHhhhh
Confidence            57999999999999998655443        34566665532         2235677665432      00111111  


Q ss_pred             --------------ccc-----CC----------cc-CCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017089           72 --------------PIE-----HG----------IV-SNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR  118 (377)
Q Consensus        72 --------------p~~-----~g----------~i-~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~  118 (377)
                                    |+.     +|          .. .-.+....+++++..   ..++.  .-..+||++|..++..+|
T Consensus        74 G~~~~~~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~speel~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qR  151 (668)
T PRK13410         74 GRRYDELDPESKRVPYTIRRNEQGNVRIKCPRLEREFAPEELSAMILRKLADDASRYLGE--PVTGAVITVPAYFNDSQR  151 (668)
T ss_pred             CCCchhhHHhhccCCeEEEECCCCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCC--CcceEEEEECCCCCHHHH
Confidence                          110     11          11 112333444444431   23332  234699999999999999


Q ss_pred             HHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHH
Q 017089          119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDA  190 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~  190 (377)
                      +.+.+.+ +.+|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+.  +|.. +..+.....+||.++++.
T Consensus       152 ~a~~~Aa-~~AGl~v~~li~EPtAAAlayg~~~~~~~~vlV~DlGgGT~Dvsv~~~~~g~~~V~at~gd~~lGG~dfD~~  230 (668)
T PRK13410        152 QATRDAG-RIAGLEVERILNEPTAAALAYGLDRSSSQTVLVFDLGGGTFDVSLLEVGNGVFEVKATSGDTQLGGNDFDKR  230 (668)
T ss_pred             HHHHHHH-HHcCCCeEEEecchHHHHHHhccccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEeecCCCCChhHHHHH
Confidence            9988777 88999999999999999999874     4689999999999998775  3322 122223458999999999


Q ss_pred             HHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC----C--C-cE--Ee
Q 017089          191 LMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP----D--G-QV--IT  251 (377)
Q Consensus       191 l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p----~--~-~~--i~  251 (377)
                      |.+++..+     +.++....     -...+++.|+.++...                ...+.+|    +  + ..  ..
T Consensus       231 l~~~l~~~f~~~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~~----------------~~~i~i~~~~~~~~g~~~~~~~  294 (668)
T PRK13410        231 IVDWLAEQFLEKEGIDLRRDRQALQRLTEAAEKAKIELSGVS----------------VTDISLPFITATEDGPKHIETR  294 (668)
T ss_pred             HHHHHHHHHHhhhCCCcccCHHHHHHHHHHHHHHHHhcCCCC----------------ceEEEEeeeecCCCCCeeEEEE
Confidence            99887543     22221110     0123555666554211                1111111    1  1 12  22


Q ss_pred             eCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEE
Q 017089          252 IGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIK  330 (377)
Q Consensus       252 i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~  330 (377)
                      ++.+.|. ..+.++..         +.+.|.+++...  .+.+.-++.|+|+||+|++|.+.+.+++.+..        .
T Consensus       295 itR~~FE~l~~~l~~r---------~~~~i~~~L~~a--g~~~~dId~VvLVGGssRiP~V~~~l~~~fg~--------~  355 (668)
T PRK13410        295 LDRKQFESLCGDLLDR---------LLRPVKRALKDA--GLSPEDIDEVVLVGGSTRMPMVQQLVRTLIPR--------E  355 (668)
T ss_pred             ECHHHHHHHHHHHHHH---------HHHHHHHHHHHc--CCChhhCcEEEEECCccccHHHHHHHHHHcCC--------C
Confidence            3333321 22222222         444444455432  23345667899999999999888888765531        2


Q ss_pred             EECCCCCccccchhhhhhhcc
Q 017089          331 VVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       331 v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +....+|+.++-.||+++|..
T Consensus       356 ~~~~~npdeaVA~GAAi~aa~  376 (668)
T PRK13410        356 PNQNVNPDEVVAVGAAIQAGI  376 (668)
T ss_pred             cccCCCCchHHHHhHHHHHHh
Confidence            233457889999999999875

>PRK13411 molecular chaperone DnaK; Provisional

Probab=99.79  E-value=5.4e-19  Score=178.99  Aligned_cols=219  Identities=16%  Similarity=0.237  Sum_probs=139.9

Q ss_pred             CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC------ceEEEEeCCCCceEEEEee--CCcc-
Q 017089          102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIY--EGYA-  172 (377)
Q Consensus       102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~~v~--~g~~-  172 (377)
                      -..+||++|..++..+|+.+.+.+ +..|++.+.++++|.||++++|.      .+.+|+|+|+++++|+.+.  +|.. 
T Consensus       133 v~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~v~~li~EPtAAAl~y~~~~~~~~~~vlV~DlGgGT~dvsi~~~~~~~~~  211 (653)
T PRK13411        133 VTQAVITVPAYFTDAQRQATKDAG-TIAGLEVLRIINEPTAAALAYGLDKQDQEQLILVFDLGGGTFDVSILQLGDGVFE  211 (653)
T ss_pred             cceEEEEECCCCCcHHHHHHHHHH-HHcCCCeEEEecchHHHHHHhcccccCCCCEEEEEEcCCCeEEEEEEEEeCCEEE
Confidence            357999999999999999988876 88999999999999999998864      3589999999999998764  2322 


Q ss_pred             cccceEEecccHHHHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEE
Q 017089          173 LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY  242 (377)
Q Consensus       173 ~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~  242 (377)
                      +........+||.++++.|.+++.++     +.++....     -...+++.|+.++.-..            ......+
T Consensus       212 V~at~gd~~LGG~dfD~~l~~~l~~~f~~~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~~------------~~i~i~~  279 (653)
T PRK13411        212 VKATAGNNHLGGDDFDNCIVDWLVENFQQQEGIDLSQDKMALQRLREAAEKAKIELSSMLT------------TSINLPF  279 (653)
T ss_pred             EEEEecCCCcCHHHHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCc------------eEEEEee
Confidence            12222345899999999998887543     22221110     02335555555542100            0001111


Q ss_pred             EcCC---Cc--EEeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHH
Q 017089          243 ELPD---GQ--VITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS  316 (377)
Q Consensus       243 ~~p~---~~--~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~  316 (377)
                      ...+   +.  .+.++.+.|. ..+.++..         +.+.|.+++.+..  +...-++.|+|+||+|++|.++++|+
T Consensus       280 ~~~d~~~~~~~~~~itR~~fe~l~~~l~~~---------~~~~i~~~L~~a~--~~~~~id~ViLvGGssriP~v~~~l~  348 (653)
T PRK13411        280 ITADETGPKHLEMELTRAKFEELTKDLVEA---------TIEPMQQALKDAG--LKPEDIDRVILVGGSTRIPAVQEAIQ  348 (653)
T ss_pred             eccCCCCCeeEEEEEcHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CCHHHCcEEEEECCCCCcchHHHHHH
Confidence            1111   11  2233333332 12222222         4445555555442  34455689999999999999999988


Q ss_pred             HHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          317 KEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       317 ~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.+...       ++....+|+.++-.||+++|..
T Consensus       349 ~~f~~~-------~~~~~~npdeaVA~GAAi~aa~  376 (653)
T PRK13411        349 KFFGGK-------QPDRSVNPDEAVALGAAIQAGV  376 (653)
T ss_pred             HHcCCc-------CcCCCCCchHHHHHHHHHHHHh
Confidence            766321       2334557889999999999864

>PRK05183 hscA chaperone protein HscA; Provisional

Probab=99.79  E-value=4.6e-19  Score=178.35  Aligned_cols=295  Identities=19%  Similarity=0.167  Sum_probs=177.5

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhccc------Cccee----
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR------GILTL----   69 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~------~~~~~----   69 (377)
                      .+|.||+||+++.+++..+..|.        ..+||+++..          .....+|.+|....      ....+    
T Consensus        20 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~f~----------~~~~~vG~~A~~~~~~~p~~ti~~~Krli   89 (616)
T PRK05183         20 LAVGIDLGTTNSLVATVRSGQAEVLPDEQGRVLLPSVVRYL----------EDGIEVGYEARANAAQDPKNTISSVKRFM   89 (616)
T ss_pred             eEEEEEeccccEEEEEEECCEEEEEEcCCCCeecCeEEEEc----------CCCEEEcHHHHHhhHhCchhhHHHHHHHh
Confidence            57999999999999997555443        2345555442          22356776654310      00000    


Q ss_pred             ------------eccc--------------cCCccCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHH
Q 017089           70 ------------KYPI--------------EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREK  120 (377)
Q Consensus        70 ------------~~p~--------------~~g~i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~  120 (377)
                                  ..|+              ..|.+...+....+++++..   +.++.  .-..+|+++|..++..+|+.
T Consensus        90 G~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qR~a  167 (616)
T PRK05183         90 GRSLADIQQRYPHLPYQFVASENGMPLIRTAQGLKSPVEVSAEILKALRQRAEETLGG--ELDGAVITVPAYFDDAQRQA  167 (616)
T ss_pred             CCCchhhhhhhhcCCeEEEecCCCceEEEecCCeEcHHHHHHHHHHHHHHHHHHHhCC--CcceEEEEECCCCCHHHHHH
Confidence                        0111              11223333444555555531   23332  34579999999999999999


Q ss_pred             HHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHH
Q 017089          121 MTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALM  192 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~  192 (377)
                      +.+.+ +.+|++.+.++++|+||+++++.     .+.+|+|+|+++++|+.+.  +|.. +..+.....+||.++++.|.
T Consensus       168 ~~~Aa-~~AGl~v~~li~EPtAAAlay~~~~~~~~~vlV~DlGGGT~DvSv~~~~~~~~evlat~gd~~lGG~d~D~~l~  246 (616)
T PRK05183        168 TKDAA-RLAGLNVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDSALGGDDFDHLLA  246 (616)
T ss_pred             HHHHH-HHcCCCeEEEecchHHHHHHhhcccCCCCEEEEEECCCCeEEEEEEEeeCCEEEEEEecCCCCcCHHHHHHHHH
Confidence            87776 88999999999999999988764     4679999999999998875  3321 12222346899999999999


Q ss_pred             HHHHHc-CCCccchhH-----HHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCcccc-ccccCCC
Q 017089          193 KILTER-GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFR-CPEVLFQ  265 (377)
Q Consensus       193 ~~l~~~-~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~-~~E~lf~  265 (377)
                      +++.++ +.+......     ...++..|+.++.-                ....+.+++-. -.++.+.|. ..+.++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~----------------~~~~i~i~~~~-~~itr~efe~l~~~l~~  309 (616)
T PRK05183        247 DWILEQAGLSPRLDPEDQRLLLDAARAAKEALSDA----------------DSVEVSVALWQ-GEITREQFNALIAPLVK  309 (616)
T ss_pred             HHHHHHcCCCcCCCHHHHHHHHHHHHHHHHhcCCC----------------ceEEEEEecCC-CeEcHHHHHHHHHHHHH
Confidence            988754 222211100     12344555544321                11222222110 012222221 1122222


Q ss_pred             CccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhh
Q 017089          266 PSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGG  345 (377)
Q Consensus       266 p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Ga  345 (377)
                      .         +.+.|.+++....  +...-++.|+|+||+|++|.+++.|++.+...        +..+.+|+.++-.||
T Consensus       310 ~---------~~~~i~~~L~~a~--~~~~~i~~ViLvGGssriP~v~~~l~~~fg~~--------~~~~~npdeaVA~GA  370 (616)
T PRK05183        310 R---------TLLACRRALRDAG--VEADEVKEVVMVGGSTRVPLVREAVGEFFGRT--------PLTSIDPDKVVAIGA  370 (616)
T ss_pred             H---------HHHHHHHHHHHcC--CCcccCCEEEEECCcccChHHHHHHHHHhccC--------cCcCCCchHHHHHHH
Confidence            1         3444444554432  22334678999999999999999988766321        223568899999999


Q ss_pred             hhhhcc
Q 017089          346 SILASL  351 (377)
Q Consensus       346 si~a~l  351 (377)
                      +++|..
T Consensus       371 Ai~a~~  376 (616)
T PRK05183        371 AIQADI  376 (616)
T ss_pred             HHHHHH
Confidence            999874

>PTZ00186 heat shock 70 kDa precursor protein; Provisional

Probab=99.77  E-value=2.4e-18  Score=173.35  Aligned_cols=218  Identities=17%  Similarity=0.186  Sum_probs=142.3

Q ss_pred             CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEee--CCccc-
Q 017089          102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYAL-  173 (377)
Q Consensus       102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~--~g~~~-  173 (377)
                      -..+|+++|..++..+|+.+.+.+ +.+|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+.  +|..- 
T Consensus       160 v~~aVITVPayF~~~qR~at~~Aa-~~AGl~v~rlInEPtAAAlayg~~~~~~~~vlV~DlGGGT~DvSil~~~~g~~~V  238 (657)
T PTZ00186        160 VSNAVVTCPAYFNDAQRQATKDAG-TIAGLNVIRVVNEPTAAALAYGMDKTKDSLIAVYDLGGGTFDISVLEIAGGVFEV  238 (657)
T ss_pred             cceEEEEECCCCChHHHHHHHHHH-HHcCCCeEEEEcChHHHHHHHhccCCCCCEEEEEECCCCeEEEEEEEEeCCEEEE
Confidence            357999999999999999988777 88999999999999999999874     4789999999999999875  55432 


Q ss_pred             ccceEEecccHHHHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEE
Q 017089          174 PHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE  243 (377)
Q Consensus       174 ~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~  243 (377)
                      ..+....++||.++++.|.+++.++     +.++....     -...+++.|+.++....            ......+.
T Consensus       239 ~at~Gd~~LGG~DfD~~l~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~------------~~i~i~~i  306 (657)
T PTZ00186        239 KATNGDTHLGGEDFDLALSDYILEEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAME------------TEVNLPFI  306 (657)
T ss_pred             EEecCCCCCCchhHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCc------------eEEEEeee
Confidence            2222356899999999999887642     22221110     12346666666653210            00011111


Q ss_pred             cC--CC---cEEeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHH
Q 017089          244 LP--DG---QVITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK  317 (377)
Q Consensus       244 ~p--~~---~~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~  317 (377)
                      ..  +|   ..+.++.+.|. ..+.++..         +.+.+.+++....  +...-++.|+|+||+|+||.+++.+++
T Consensus       307 ~~~~~g~~~~~~~ItR~efe~l~~~l~~r---------~~~~v~~~L~~a~--~~~~dId~VvLVGGssriP~V~~~l~~  375 (657)
T PTZ00186        307 TANADGAQHIQMHISRSKFEGITQRLIER---------SIAPCKQCMKDAG--VELKEINDVVLVGGMTRMPKVVEEVKK  375 (657)
T ss_pred             ccCCCCCcceEEEecHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CChhhCCEEEEECCcccChHHHHHHHH
Confidence            11  11   12334433332 22223222         3444445554332  234556889999999999999999887


Q ss_pred             HHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          318 EITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       318 eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+...        .....+|+.++-.||+++|..
T Consensus       376 ~fg~~--------~~~~~nPdeaVA~GAAi~a~~  401 (657)
T PTZ00186        376 FFQKD--------PFRGVNPDEAVALGAATLGGV  401 (657)
T ss_pred             HhCCC--------ccccCCCchHHHHhHHHHHHH
Confidence            76321        123457899999999999874

>PTZ00009 heat shock 70 kDa protein; Provisional

Probab=99.77  E-value=2.8e-18  Score=173.95  Aligned_cols=215  Identities=16%  Similarity=0.214  Sum_probs=142.0

Q ss_pred             CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-------ceEEEEeCCCCceEEEEee--CCcc
Q 017089          102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA  172 (377)
Q Consensus       102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~i~~v~--~g~~  172 (377)
                      -..++|++|..++..+|+.+.+.+ +.+|++.+.++++|+||+++++.       .+.+|+|+|+++++|+.+.  +|..
T Consensus       140 v~~~VItVPa~f~~~qR~a~~~Aa-~~AGl~v~~li~EptAAAl~y~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~  218 (653)
T PTZ00009        140 VKDAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLTIEDGIF  218 (653)
T ss_pred             cceeEEEeCCCCCHHHHHHHHHHH-HHcCCceeEEecchHHHHHHHhhhccCCCCCEEEEEECCCCeEEEEEEEEeCCeE
Confidence            357999999999999999988777 88999999999999999998863       4789999999999998774  4432


Q ss_pred             c-ccceEEecccHHHHHHHHHHHHHHc------CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcce
Q 017089          173 L-PHAILRLDLAGRDLTDALMKILTER------GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEK  240 (377)
Q Consensus       173 ~-~~~~~~~~~GG~~l~~~l~~~l~~~------~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~  240 (377)
                      - ..+.....+||.++++.|.+++.++      +.++....     -...+++.|+.++..                ...
T Consensus       219 ~v~a~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~----------------~~~  282 (653)
T PTZ00009        219 EVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSS----------------TQA  282 (653)
T ss_pred             EEEEecCCCCCChHHHHHHHHHHHHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHhCCCC----------------ceE
Confidence            1 1122245899999999999888642      12221100     023355566555421                112


Q ss_pred             EEEcC---CCcEE--eeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHH
Q 017089          241 SYELP---DGQVI--TIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR  314 (377)
Q Consensus       241 ~~~~p---~~~~i--~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~r  314 (377)
                      .+.++   ++..+  .++.+.|. ..+.+|..         +.+.|.+++.....+  ..-++.|+|+||+|++|.+++.
T Consensus       283 ~i~i~~~~~~~d~~~~itR~~fe~l~~~l~~~---------~~~~i~~~L~~a~~~--~~~i~~ViLvGGssriP~v~~~  351 (653)
T PTZ00009        283 TIEIDSLFEGIDYNVTISRARFEELCGDYFRN---------TLQPVEKVLKDAGMD--KRSVHEVVLVGGSTRIPKVQSL  351 (653)
T ss_pred             EEEEEeccCCceEEEEECHHHHHHHHHHHHHH---------HHHHHHHHHHHcCCC--HHHCcEEEEECCCCCChhHHHH
Confidence            22222   33333  33433332 22333322         445566666655332  3456889999999999999988


Q ss_pred             HHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       315 l~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      |++.+...       ++....+|+.++-.||+++|..
T Consensus       352 i~~~f~~~-------~~~~~~npdeaVA~GAa~~aa~  381 (653)
T PTZ00009        352 IKDFFNGK-------EPCKSINPDEAVAYGAAVQAAI  381 (653)
T ss_pred             HHHHhCCC-------CCCCCCCcchHHhhhhhhhHHH
Confidence            88766321       2333457889999999999764

>PRK11678 putative chaperone; Provisional

Probab=99.68  E-value=2.4e-16  Score=152.34  Aligned_cols=180  Identities=17%  Similarity=0.193  Sum_probs=112.2

Q ss_pred             cEEEeCCCCceEEeeeCCCCC--------CCCCCceeEecCCCCc-------------------------------cccC
Q 017089            9 PLVCDNGTGMVKAGFAGDDAP--------RAVFPSIVGRPRHTGV-------------------------------MVGM   49 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P--------~~~~p~~~~~~~~~~~-------------------------------~~~~   49 (377)
                      .+.||+||+++-+++..+..|        ...+||.++.+.....                               -...
T Consensus         2 ~iGID~GTtNs~va~~~~~~~~li~~~~~~~~~pS~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (450)
T PRK11678          2 FIGFDYGTANCSVAVMRDGKPRLLPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDERQALLRRAIRYNREEDIDV   81 (450)
T ss_pred             eEEEecCccceeeEEeeCCceEEEEcCCCCCcCCeeeeccCchhhhhhhhhhcccCcccchhhhhhhhhhhhcccccccc
Confidence            489999999999999865433        3466777765321100                               0001


Q ss_pred             CCcceeeccchhccc----Ccc----eeec-----cccCCccCCHH-HHHHHHHHhcc---cccccCCCCCcEEEeeCCC
Q 017089           50 GQKDAYVGDEAQSKR----GIL----TLKY-----PIEHGIVSNWD-DMEKIWHHTFY---NELRVAPEEHPVLLTEAPL  112 (377)
Q Consensus        50 ~~~~~~vg~~~~~~~----~~~----~~~~-----p~~~g~i~d~~-~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~  112 (377)
                      +.....+|.++.+..    +.-    .+++     ++..+.+...+ ....+|+++-.   ..++  ..-..+||+.|..
T Consensus        82 ~~~~~~~G~~A~~~~~~~p~~~r~i~s~Kr~lg~~~~~~~~~~~~e~l~a~iL~~lk~~ae~~~g--~~v~~~VItvPa~  159 (450)
T PRK11678         82 TAQSVFFGLAALAQYLEDPEEVYFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIKQQAEAQLQ--AAITQAVIGRPVN  159 (450)
T ss_pred             cccccchhHHHHHhhccCCCCceEEecchhhhccCCCCccceeCHHHHHHHHHHHHHHHHHHHhC--CCCCcEEEEECCc
Confidence            234567888875541    111    1121     23323333333 23444444421   1222  2235799999998


Q ss_pred             CC-----HHhHHH--HHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCC----------
Q 017089          113 NP-----KANREK--MTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEG----------  170 (377)
Q Consensus       113 ~~-----~~~~~~--l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g----------  170 (377)
                      +.     ..+|+.  .+.-+.+..|++.+.++++|+||+++++.     .+.+|+|+|+++++++.+.-+          
T Consensus       160 F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl~y~~~~~~~~~vlV~D~GGGT~D~Svv~~~~~~~~~~~r~  239 (450)
T PRK11678        160 FQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDFEATLTEEKRVLVVDIGGGTTDCSMLLMGPSWRGRADRS  239 (450)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHhccccCCCCeEEEEEeCCCeEEEEEEEecCcccccCCcc
Confidence            86     556543  24444588999999999999999999873     578999999999999887422          


Q ss_pred             -cccccceEEecccHHHHHHHHH
Q 017089          171 -YALPHAILRLDLAGRDLTDALM  192 (377)
Q Consensus       171 -~~~~~~~~~~~~GG~~l~~~l~  192 (377)
                       .++.++  -..+||.++++.|.
T Consensus       240 ~~vla~~--G~~lGG~DfD~~L~  260 (450)
T PRK11678        240 ASLLGHS--GQRIGGNDLDIALA  260 (450)
T ss_pred             eeEEecC--CCCCChHHHHHHHH
Confidence             122111  13799999999996

>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.67  E-value=8.5e-16  Score=152.80  Aligned_cols=311  Identities=18%  Similarity=0.179  Sum_probs=180.1

Q ss_pred             CCCcEEEeCCCCceEEeeeCCC-CCCCCCCceeEecCCCCccccCCCcceeeccchhcc------cCcceeeccccCC--
Q 017089            6 DIQPLVCDNGTGMVKAGFAGDD-APRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPIEHG--   76 (377)
Q Consensus         6 ~~~~vviD~Gs~~~k~G~~~~~-~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~~~g--   76 (377)
                      ...+|.||+||+++.+++.... .|. ++++..+.+..+.++....+...++|..+.+.      ...+.+++.+..+  
T Consensus         4 ~~~~iGIDlGTTNS~vA~~~~~~~~~-vi~n~~g~r~~PSvv~f~~~~~~~vG~~A~~q~~~~p~~t~~~~kr~~G~~~~   82 (579)
T COG0443           4 AKKAIGIDLGTTNSVVAVMRGGGLPK-VIENAEGERLTPSVVAFSKNGEVLVGQAAKRQAVDNPENTIFSIKRKIGRGSN   82 (579)
T ss_pred             CceEEEEEcCCCcEEEEEEeCCCCce-EecCCCCCcccceEEEECCCCCEEecHHHHHHhhhCCcceEEEEehhcCCCCC
Confidence            4568999999999999998755 344 33444433322222222222357888877653      1233444444322  


Q ss_pred             ----------ccCCH-HHHHHHHHHhc---ccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccc
Q 017089           77 ----------IVSNW-DDMEKIWHHTF---YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL  142 (377)
Q Consensus        77 ----------~i~d~-~~~~~~~~~~~---~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~  142 (377)
                                ..... +....++.++-   ...|+  ..-..+++++|.+++..+|..+.+.+ +..|++.+.++++|+|
T Consensus        83 ~~~~~~~~~~~~~~~eeisa~~L~~lk~~ae~~lg--~~v~~~VItVPayF~d~qR~at~~A~-~iaGl~vlrlinEPtA  159 (579)
T COG0443          83 GLKISVEVDGKKYTPEEISAMILTKLKEDAEAYLG--EKVTDAVITVPAYFNDAQRQATKDAA-RIAGLNVLRLINEPTA  159 (579)
T ss_pred             CCcceeeeCCeeeCHHHHHHHHHHHHHHHHHHhhC--CCcceEEEEeCCCCCHHHHHHHHHHH-HHcCCCeEEEecchHH
Confidence                      11122 23344444432   12232  23567999999999999998877776 7899999999999999


Q ss_pred             cccccCC-----ceEEEEeCCCCceEEEEeeC--Ccc-cccceEEecccHHHHHHHHHHHHHHc----C-CCccchh-H-
Q 017089          143 SLYASGR-----TTGIVLDSGDGVSHTVPIYE--GYA-LPHAILRLDLAGRDLTDALMKILTER----G-YSFTTTA-E-  207 (377)
Q Consensus       143 a~~~~g~-----~~~lVVDiG~~~t~i~~v~~--g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~----~-~~~~~~~-~-  207 (377)
                      |++++|.     .+-+|+|+|+++++++.|-=  |.. +........+||++++..|..++..+    + .++.... . 
T Consensus       160 AAlayg~~~~~~~~vlV~DlGGGTfDvSll~~~~g~~ev~at~gd~~LGGddfD~~l~~~~~~~f~~~~~~d~~~~~~~~  239 (579)
T COG0443         160 AALAYGLDKGKEKTVLVYDLGGGTFDVSLLEIGDGVFEVLATGGDNHLGGDDFDNALIDYLVMEFKGKGGIDLRSDKAAL  239 (579)
T ss_pred             HHHHhHhccCCCcEEEEEEcCCCCEEEEEEEEcCCEEEEeecCCCcccCchhHHHHHHHHHHHHhhccCCccccccHHHH
Confidence            9999985     47899999999999998754  322 22334466899999999999887643    1 2222211 1 


Q ss_pred             ---HHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEee--CCccccccccCCCCccCCCcCCChHHHHHH
Q 017089          208 ---REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAERFRCPEVLFQPSMIGMEAAGIHETTYN  282 (377)
Q Consensus       208 ---~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i--~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~  282 (377)
                         .+.++..|..++....              ....+..-++. +.+  .-.|-.+ |-+..+.     ...+.+.+..
T Consensus       240 ~rL~~~ae~aK~~LS~~~~--------------~~i~~~~~~~~-~~~~~~ltR~~~-E~l~~dl-----l~r~~~~~~~  298 (579)
T COG0443         240 QRLREAAEKAKIELSSATQ--------------TSINLPSIGGD-IDLLKELTRAKF-EELILDL-----LERTIEPVEQ  298 (579)
T ss_pred             HHHHHHHHHHHHHcccccc--------------cccchhhcccc-chhhhhhhHHHH-HHHHHHH-----HHHHHHHHHH
Confidence               1345555555543211              11111111111 111  0011111 1111110     0001122222


Q ss_pred             HHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          283 SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       283 ~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +++  +..+...-++-|+++||.++||-+.+.+.+.+.    .    ......+|+.++-.||++.|..
T Consensus       299 al~--~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~----~----~~~~~inpdeava~GAa~qa~~  357 (579)
T COG0443         299 ALK--DAGLEKSDIDLVILVGGSTRIPAVQELVKEFFG----K----EPEKSINPDEAVALGAAIQAAV  357 (579)
T ss_pred             HHH--HcCCChhhCceEEEccceeccHHHHHHHHHHhC----c----cccccCCccHHHHHHHHHHHHh
Confidence            222  222334566779999999999966666655553    1    3344567889999999998875

>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins

Probab=99.67  E-value=8.7e-17  Score=163.26  Aligned_cols=234  Identities=20%  Similarity=0.235  Sum_probs=143.9

Q ss_pred             HHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC------ceE
Q 017089           82 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTG  152 (377)
Q Consensus        82 ~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~  152 (377)
                      +....+++++..   +.++..  -..+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||+++++.      .+.
T Consensus       114 ~~~~~~l~~l~~~a~~~~~~~--~~~~vitVPa~~~~~qr~~~~~Aa-~~agl~~~~li~Ep~Aaa~~y~~~~~~~~~~v  190 (602)
T PF00012_consen  114 ELSAMILKYLKEMAEKYLGEK--VTDVVITVPAYFTDEQRQALRDAA-ELAGLNVLRLINEPTAAALAYGLERSDKGKTV  190 (602)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSB--EEEEEEEE-TT--HHHHHHHHHHH-HHTT-EEEEEEEHHHHHHHHTTTTSSSSEEEE
T ss_pred             cccccchhhhcccchhhcccc--cccceeeechhhhhhhhhcccccc-cccccccceeecccccccccccccccccccce
Confidence            445555555531   122221  246999999999999999988887 88999999999999999987753      478


Q ss_pred             EEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhcc
Q 017089          153 IVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLA  219 (377)
Q Consensus       153 lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~  219 (377)
                      +|+|+|+++++++.+.  +|.. +........+||.++++.|.+++.++     +.+.....     -...++..|+.++
T Consensus       191 lv~D~Gggt~dvs~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~d~~~~~~~~~~L~~~~e~~K~~Ls  270 (602)
T PF00012_consen  191 LVVDFGGGTFDVSVVEFSNGQFEVLATAGDNNLGGRDFDEALAEYLLEKFKKKYKIDLRENPRAMARLLEAAEKAKEQLS  270 (602)
T ss_dssp             EEEEEESSEEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSS-GTCSHHHHHHHHHHHHHHHHHTT
T ss_pred             eccccccceEeeeehhcccccccccccccccccccceecceeeccccccccccccccccccccccccccccccccccccc
Confidence            9999999999998774  4432 22233456899999999999988643     22222110     0223455555544


Q ss_pred             ceecCHHHHHHHhccCCCcceEEE----cCCCcEEee--CCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHH
Q 017089          220 YIALDYEQELETAKTSSAVEKSYE----LPDGQVITI--GAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIR  292 (377)
Q Consensus       220 ~v~~~~~~~~~~~~~~~~~~~~~~----~p~~~~i~i--~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~  292 (377)
                      ..              ......+.    .+++..+.+  ..+.|. ..+.+++.         +.+.|.+++.....  .
T Consensus       271 ~~--------------~~~~~~~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~---------~~~~i~~~l~~~~~--~  325 (602)
T PF00012_consen  271 SN--------------DNTEITISIESLYDDGEDFSITITREEFEELCEPLLER---------IIEPIEKALKDAGL--K  325 (602)
T ss_dssp             TS--------------SSSEEEEEEEEEETTTEEEEEEEEHHHHHHHTHHHHHH---------THHHHHHHHHHTT----
T ss_pred             cc--------------cccccccccccccccccccccccccceecccccccccc---------cccccccccccccc--c
Confidence            31              01112221    122443333  333332 22223222         55666666665432  2


Q ss_pred             HHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          293 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       293 ~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ..-++.|+|+||+|++|-+.+.|++.+.    .    .+..+.+|..++-.||+++|..
T Consensus       326 ~~~i~~V~lvGG~sr~p~v~~~l~~~f~----~----~~~~~~~p~~aVA~GAa~~a~~  376 (602)
T PF00012_consen  326 KEDIDSVLLVGGSSRIPYVQEALKELFG----K----KISKSVNPDEAVARGAALYAAI  376 (602)
T ss_dssp             GGGESEEEEESGGGGSHHHHHHHHHHTT----S----EEB-SS-TTTHHHHHHHHHHHH
T ss_pred             ccccceeEEecCcccchhhhhhhhhccc----c----ccccccccccccccccccchhh
Confidence            4456789999999999988777766553    1    3445668899999999999864

Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....

>PRK09472 ftsA cell division protein FtsA; Reviewed

Probab=99.62  E-value=1.3e-14  Score=140.25  Aligned_cols=202  Identities=18%  Similarity=0.200  Sum_probs=133.9

Q ss_pred             CHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHH
Q 017089          114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~  188 (377)
                      +....+.+.+ +++..|+....++.+|+|+++++..     ...+|||||+++|+++.+.+|.++  ....+++||++++
T Consensus       164 ~~~~~~~~~~-a~~~aGl~v~~iv~ep~Aaa~a~l~~~e~~~gv~vvDiGggtTdisv~~~G~l~--~~~~i~~GG~~it  240 (420)
T PRK09472        164 HNDMAKNIVK-AVERCGLKVDQLIFAGLASSYAVLTEDERELGVCVVDIGGGTMDIAVYTGGALR--HTKVIPYAGNVVT  240 (420)
T ss_pred             chHHHHHHHH-HHHHcCCeEeeEEehhhHHHHHhcChhhhhcCeEEEEeCCCceEEEEEECCEEE--EEeeeechHHHHH
Confidence            3445566666 5588999999999999999998753     358999999999999999999888  6778999999999


Q ss_pred             HHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCC--C-cEEeeCCccccccccCCC
Q 017089          189 DALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QVITIGAERFRCPEVLFQ  265 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~--~-~~i~i~~~~~~~~E~lf~  265 (377)
                      +.+...|.         ...+.+|++|.+++....+..          .....+.++.  + ....++  +....+++..
T Consensus       241 ~dIa~~l~---------i~~~~AE~lK~~~g~~~~~~~----------~~~~~i~v~~~~~~~~~~i~--~~~l~~ii~~  299 (420)
T PRK09472        241 SDIAYAFG---------TPPSDAEAIKVRHGCALGSIV----------GKDESVEVPSVGGRPPRSLQ--RQTLAEVIEP  299 (420)
T ss_pred             HHHHHHhC---------cCHHHHHHHHHhcceeccccC----------CCCceeEecCCCCCCCeEEc--HHHHHHHHHH
Confidence            99987762         135779999998876532210          0011122221  1 111111  1111122111


Q ss_pred             CccCCCcCCChHHHHHHHHhcCCHHHHH-----HhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC------
Q 017089          266 PSMIGMEAAGIHETTYNSIMKCDVDIRK-----DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP------  334 (377)
Q Consensus       266 p~~~~~~~~~l~~~I~~~i~~~~~~~~~-----~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~------  334 (377)
                      .      ...+.+.|.+++..++..++.     .+.+.|+||||+|+|||+.+.+++.+..      ++++..|      
T Consensus       300 r------~~ei~~~i~~~l~~~~~~l~~~g~~~~~~~givLtGG~a~lpgi~e~~~~~f~~------~vri~~P~~~~g~  367 (420)
T PRK09472        300 R------YTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHT------QVRIGAPLNITGL  367 (420)
T ss_pred             H------HHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEeCchhccccHHHHHHHHhCC------CeEEeCCcccCCC
Confidence            0      111334555555555444432     3556799999999999999999988842      3444332      


Q ss_pred             ----CCCccccchhhhhhhcc
Q 017089          335 ----PERKYSVWIGGSILASL  351 (377)
Q Consensus       335 ----~~~~~~~w~Gasi~a~l  351 (377)
                          .+|.|++-.|...|+..
T Consensus       368 ~~~~~~P~~ata~Gl~~~~~~  388 (420)
T PRK09472        368 TDYAQEPYYSTAVGLLHYGKE  388 (420)
T ss_pred             hhhcCCcHHHHHHHHHHHhhh
Confidence                36889999999888764

>TIGR01174 ftsA cell division protein FtsA

Probab=99.61  E-value=1.5e-14  Score=137.91  Aligned_cols=181  Identities=17%  Similarity=0.226  Sum_probs=117.9

Q ss_pred             CHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHH
Q 017089          114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~  188 (377)
                      ++...+.+.+.+ +.+|+..+.++.+|+|+++++..     ...+|||+|+++|+++.+.+|.+.  .....++||++++
T Consensus       156 ~~~~v~~~~~~~-~~aGl~~~~i~~~~~A~a~a~~~~~~~~~~~~vvDiG~gtt~i~i~~~g~~~--~~~~i~~GG~~it  232 (371)
T TIGR01174       156 SSTILRNLVKCV-ERCGLEVDNIVLSGLASAIAVLTEDEKELGVCLIDIGGGTTDIAVYTGGSIR--YTKVIPIGGNHIT  232 (371)
T ss_pred             EHHHHHHHHHHH-HHcCCCeeeEEEhhhhhhhhhcCcchhcCCEEEEEeCCCcEEEEEEECCEEE--EEeeecchHHHHH
Confidence            556666666655 88999999999999999987642     367999999999999999999876  4567899999999


Q ss_pred             HHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCC---CcEEeeCCcccc-ccccCC
Q 017089          189 DALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD---GQVITIGAERFR-CPEVLF  264 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~---~~~i~i~~~~~~-~~E~lf  264 (377)
                      +.+.+.+.         ...+.+|++|.+++....+..          .....+.++.   +....++.+.+. +.+..+
T Consensus       233 ~~i~~~l~---------~~~~~AE~lK~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~is~~~l~~ii~~~~  293 (371)
T TIGR01174       233 KDIAKALR---------TPLEEAERIKIKYGCASIPLE----------GPDENIEIPSVGERPPRSLSRKELAEIIEARA  293 (371)
T ss_pred             HHHHHHhC---------CCHHHHHHHHHHeeEecccCC----------CCCCEEEeccCCCCCCeEEcHHHHHHHHHHHH
Confidence            99987652         135779999999987532210          0011122211   111222211111 111111


Q ss_pred             CCccCCCcCCChHHHHH-HHHhcCCHHHHHHhhcC-cccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC
Q 017089          265 QPSMIGMEAAGIHETTY-NSIMKCDVDIRKDLYGN-IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP  334 (377)
Q Consensus       265 ~p~~~~~~~~~l~~~I~-~~i~~~~~~~~~~l~~n-Iil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~  334 (377)
                      +         .+.+.|. +.+.+...+  . -+.+ |+||||+|++||+.+++++.+..      ++++..|
T Consensus       294 ~---------ei~~~i~~~~L~~~~~~--~-~i~~gIvLtGG~S~ipgi~~~l~~~~~~------~vr~~~P  347 (371)
T TIGR01174       294 E---------EILEIVKQKELRKSGFK--E-ELNGGIVLTGGGAQLEGIVELAEKVFDN------PVRIGLP  347 (371)
T ss_pred             H---------HHHHHHHHHHHHhcCCc--c-cCCCEEEEeChHHcccCHHHHHHHHhCC------CeEEECC
Confidence            1         1444444 555444322  2 2344 99999999999999999998843      4555543

This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.

>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]

Probab=99.57  E-value=3.8e-14  Score=133.87  Aligned_cols=201  Identities=19%  Similarity=0.259  Sum_probs=134.8

Q ss_pred             CHHhHHHHHhhccccCCCCeEEeeecccccccccC-----CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHH
Q 017089          114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-----~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~  188 (377)
                      +....++|.+.+ |+.+.....++-+|+|++.+.=     .-++++||+|+++|+|+.+.+|.+.  +...+|+||+++|
T Consensus       163 ~~~~~~Nl~k~v-~r~gl~v~~i~l~plAsa~a~L~~dEkelGv~lIDiG~GTTdIai~~~G~l~--~~~~ipvgG~~vT  239 (418)
T COG0849         163 PKNILENLEKCV-ERAGLKVDNIVLEPLASALAVLTEDEKELGVALIDIGGGTTDIAIYKNGALR--YTGVIPVGGDHVT  239 (418)
T ss_pred             chHHHHHHHHHH-HHhCCCeeeEEEehhhhhhhccCcccHhcCeEEEEeCCCcEEEEEEECCEEE--EEeeEeeCccHHH
Confidence            455566666665 8899999999999999987763     3589999999999999999999998  6677999999999


Q ss_pred             HHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCC--CcEEeeCCccccccccCCCC
Q 017089          189 DALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--GQVITIGAERFRCPEVLFQP  266 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~--~~~i~i~~~~~~~~E~lf~p  266 (377)
                      +.+...|.         .+.+.+|++|.+++....+..          .....+++|.  +.. ...-.+....++.-. 
T Consensus       240 ~DIa~~l~---------t~~~~AE~iK~~~g~a~~~~~----------~~~~~i~v~~vg~~~-~~~~t~~~ls~II~a-  298 (418)
T COG0849         240 KDIAKGLK---------TPFEEAERIKIKYGSALISLA----------DDEETIEVPSVGSDI-PRQVTRSELSEIIEA-  298 (418)
T ss_pred             HHHHHHhC---------CCHHHHHHHHHHcCccccCcC----------CCcceEecccCCCcc-cchhhHHHHHHHHHh-
Confidence            99998882         256789999999987543321          1112222211  111 000011111111100 


Q ss_pred             ccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC----------CC
Q 017089          267 SMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP----------PE  336 (377)
Q Consensus       267 ~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~----------~~  336 (377)
                           ....+.+++...|++.-..  ..+...|+||||.+++||+.+-.++-+..      ++|+..|          .+
T Consensus       299 -----R~~Ei~~lV~~~l~~~g~~--~~~~~gvVlTGG~a~l~Gi~elA~~if~~------~vRig~P~~~~Gl~d~~~~  365 (418)
T COG0849         299 -----RVEEILELVKAELRKSGLP--NHLPGGVVLTGGGAQLPGIVELAERIFGR------PVRLGVPLNIVGLTDIARN  365 (418)
T ss_pred             -----hHHHHHHHHHHHHHHcCcc--ccCCCeEEEECchhcCccHHHHHHHhcCC------ceEeCCCccccCchhhccC
Confidence                 0111334445555444222  56778899999999999999877766642      3444443          35


Q ss_pred             Cccccchhhhhhhcc
Q 017089          337 RKYSVWIGGSILASL  351 (377)
Q Consensus       337 ~~~~~w~Gasi~a~l  351 (377)
                      |.|++-.|.-.++..
T Consensus       366 p~fs~avGl~~~~~~  380 (418)
T COG0849         366 PAFSTAVGLLLYGAL  380 (418)
T ss_pred             chhhhhHHHHHHHhh
Confidence            899999999888875

>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=99.41  E-value=8.3e-12  Score=113.71  Aligned_cols=215  Identities=19%  Similarity=0.229  Sum_probs=127.7

Q ss_pred             CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC------ceEEEEeCCCCceEEEE--eeCCcc-
Q 017089          102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVP--IYEGYA-  172 (377)
Q Consensus       102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~~--v~~g~~-  172 (377)
                      -...++++|.+++..+|+...+. ---.|...+.++++|.+|++++|.      .+-+|.|+|+++.+|+.  |-+|.. 
T Consensus       172 v~~AVvTvPAYFNDAQrQATKDA-GtIAgLnV~RIiNePTaAAIAYGLDKk~gEknilVfDLGGGTFDVSlLtIdnGVFe  250 (663)
T KOG0100|consen  172 VTHAVVTVPAYFNDAQRQATKDA-GTIAGLNVVRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDNGVFE  250 (663)
T ss_pred             ccceEEecchhcchHHHhhhccc-ceeccceEEEeecCccHHHHHhcccccCCcceEEEEEcCCceEEEEEEEEcCceEE
Confidence            35689999999999999875544 366889999999999999999985      58899999999977764  456643 


Q ss_pred             cccceEEecccHHHHHHHHHHHHHH-----cCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCC
Q 017089          173 LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDG  247 (377)
Q Consensus       173 ~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~  247 (377)
                      +.......++||.++++++.+++-+     .|.++..  +...+.++++..-         ..+...++......++   
T Consensus       251 VlaTnGDThLGGEDFD~rvm~~fiklykkK~gkDv~k--dnkA~~KLrRe~E---------kAKRaLSsqhq~riEI---  316 (663)
T KOG0100|consen  251 VLATNGDTHLGGEDFDQRVMEYFIKLYKKKHGKDVRK--DNKAVQKLRREVE---------KAKRALSSQHQVRIEI---  316 (663)
T ss_pred             EEecCCCcccCccchHHHHHHHHHHHHhhhcCCccch--hhHHHHHHHHHHH---------HHHhhhccccceEEee---
Confidence            1222335689999999998877642     2333332  4444555544311         1111111111122222   


Q ss_pred             cEEeeCCccccccccCCCCccCCCc---------CCChHHHHHHHHhcC--CHHHHHHhhcCcccccCCcCCcChHHHHH
Q 017089          248 QVITIGAERFRCPEVLFQPSMIGME---------AAGIHETTYNSIMKC--DVDIRKDLYGNIVLSGGSTMFPGIADRMS  316 (377)
Q Consensus       248 ~~i~i~~~~~~~~E~lf~p~~~~~~---------~~~l~~~I~~~i~~~--~~~~~~~l~~nIil~GG~s~i~gl~~rl~  316 (377)
                                   |.||....++..         ...|-..-+.-+++.  +.++++.-++.|||+||+++||    ++|
T Consensus       317 -------------eS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIP----KvQ  379 (663)
T KOG0100|consen  317 -------------ESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIP----KVQ  379 (663)
T ss_pred             -------------eeccccccccchhhhhHHHHhhhHHHHHhhHHHHHHHhhcCcccccCceEEEecCcccCh----hHH
Confidence                         444444222110         001111111222222  5567777788999999999999    555


Q ss_pred             HHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          317 KEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       317 ~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +-|...+.-...-+   --+|+-++-.||++-|-.
T Consensus       380 qllk~fF~GKepsk---GinPdEAVAYGAAVQaGv  411 (663)
T KOG0100|consen  380 QLLKDFFNGKEPSK---GINPDEAVAYGAAVQAGV  411 (663)
T ss_pred             HHHHHHhCCCCccC---CCChHHHHHhhhhhhhcc
Confidence            55555542210111   125677777787776543

>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=99.39  E-value=7.7e-12  Score=121.92  Aligned_cols=216  Identities=16%  Similarity=0.208  Sum_probs=134.0

Q ss_pred             CcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-------ceEEEEeCCCCceEEEEee--CCcc-
Q 017089          103 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA-  172 (377)
Q Consensus       103 ~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~i~~v~--~g~~-  172 (377)
                      ..+++++|..++..+|+.+-+.. ..+|++.+.++++|.||++++|.       .+-+|.|+|+++.+|+++.  +|.. 
T Consensus       144 ~~aviTVPa~F~~~Qr~at~~A~-~iaGl~vlrii~EPtAaalAygl~k~~~~~~~VlI~DlGggtfdvs~l~i~gG~~~  222 (620)
T KOG0101|consen  144 KKAVVTVPAYFNDSQRAATKDAA-LIAGLNVLRIINEPTAAALAYGLDKKVLGERNVLIFDLGGGTFDVSVLSLEGGIFE  222 (620)
T ss_pred             eeEEEEecCCcCHHHHHHHHHHH-HhcCCceeeeecchHHHHHHhhccccccceeeEEEEEcCCCceeeeeEEeccchhh
Confidence            45899999999999999877776 77999999999999999999873       4679999999999888774  4422 


Q ss_pred             cccceEEecccHHHHHHHHHHHHHHc-----CCCccchh----H-HHHHHHHHHhccceecCHHHHHHHhccCCCcceEE
Q 017089          173 LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA----E-REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY  242 (377)
Q Consensus       173 ~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~----~-~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~  242 (377)
                      +.......++||.++++.|.+++...     +.+.....    . ...+|..|+.+.....              .....
T Consensus       223 vkat~gd~~lGGedf~~~l~~h~~~ef~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~~~--------------~~i~v  288 (620)
T KOG0101|consen  223 VKATAGDTHLGGEDFDNKLVNHFAAEFKRKAGKDIGGNARALRRLRTACERAKRTLSSSTQ--------------ASIEI  288 (620)
T ss_pred             hhhhcccccccchhhhHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHhhhccccc--------------ceecc
Confidence            23333457999999999998887432     11111100    0 1123344443321100              00000


Q ss_pred             -EcCCCcEEeeC--Ccccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHH
Q 017089          243 -ELPDGQVITIG--AERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKE  318 (377)
Q Consensus       243 -~~p~~~~i~i~--~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~e  318 (377)
                       .|-+|..+...  ..||. .+.-||..         ..+.+..++...-  +-+..++.||||||++++|.+..-+++-
T Consensus       289 dsL~~g~d~~~~itrarfe~l~~dlf~~---------~~~~v~~~L~da~--~dk~~i~~vvlVGGstriPk~~~ll~d~  357 (620)
T KOG0101|consen  289 DSLYEGIDFYTSITRARFEELNADLFRS---------TLEPVEKALKDAK--LDKSDIDEVVLVGGSTRIPKVQKLLEDF  357 (620)
T ss_pred             chhhccccccceeehhhhhhhhhHHHHH---------HHHHHHHHHHhhc--cCccCCceeEEecCcccchHHHHHHHHH
Confidence             12233333222  22222 22334332         3444444554332  2344567899999999999777666655


Q ss_pred             HHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          319 ITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       319 L~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +..       -++..+-+|+.++-.||++.|..
T Consensus       358 f~~-------k~~~~sinpDeavA~GAavqaa~  383 (620)
T KOG0101|consen  358 FNG-------KELNKSINPDEAVAYGAAVQAAI  383 (620)
T ss_pred             hcc-------cccccCCCHHHHHHhhHHHHhhh
Confidence            522       12334457899999999999886

>TIGR01175 pilM type IV pilus assembly protein PilM

Probab=99.27  E-value=1.7e-10  Score=109.22  Aligned_cols=155  Identities=17%  Similarity=0.200  Sum_probs=107.1

Q ss_pred             CHHhHHHHHhhccccCCCCeEEeeeccccccccc----------C-Cc-eEEEEeCCCCceEEEEeeCCcccccceEEec
Q 017089          114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS----------G-RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLD  181 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~----------g-~~-~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~  181 (377)
                      ++...+.+.+.+ +.+|+.-..+..+++|.+-+.          . .. +.++||+|+++|+++.+.+|.++  ....++
T Consensus       141 ~~~~v~~~~~~~-~~aGl~~~~id~~~~Al~~~~~~~~~~~~~~~~~~~~~~lvdiG~~~t~l~i~~~g~~~--~~r~i~  217 (348)
T TIGR01175       141 RKEVVDSRLHAL-KLAGLEPKVVDVESFALLRAWRLLGEQLASRTYRLTDAALVDIGATSSTLNLLHPGRML--FTREVP  217 (348)
T ss_pred             cHHHHHHHHHHH-HHcCCceEEEecHHHHHHHHHHHHHhhCccccccCceEEEEEECCCcEEEEEEECCeEE--EEEEee
Confidence            677778877775 889999888888888764322          1 22 48999999999999999999988  778899


Q ss_pred             ccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccc
Q 017089          182 LAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPE  261 (377)
Q Consensus       182 ~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E  261 (377)
                      +||.++++.+.+.+   +.      +.+.++++|.+.+.... ...+                              ..+
T Consensus       218 ~G~~~i~~~i~~~~---~~------~~~~Ae~~k~~~~~~~~-~~~~------------------------------~~~  257 (348)
T TIGR01175       218 FGTRQLTSELSRAY---GL------NPEEAGEAKQQGGLPLL-YDPE------------------------------VLR  257 (348)
T ss_pred             chHHHHHHHHHHHc---CC------CHHHHHHHHhcCCCCCc-hhHH------------------------------HHH
Confidence            99999999998665   22      34668888887653211 0000                              000


Q ss_pred             cCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHH
Q 017089          262 VLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT  320 (377)
Q Consensus       262 ~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~  320 (377)
                      ..++         .+..-|.+++.-+-........+.|+||||++.++||.+.|+++|.
T Consensus       258 ~~~~---------~l~~eI~~~l~~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~~~l~  307 (348)
T TIGR01175       258 RFKG---------ELVDEIRRSLQFFTAQSGTNSLDGLVLAGGGATLSGLDAAIYQRLG  307 (348)
T ss_pred             HHHH---------HHHHHHHHHHHhhcCCCCCcccceEEEECccccchhHHHHHHHHHC
Confidence            0111         1444455555433211222346789999999999999999999994

This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.

>PRK13917 plasmid segregation protein ParM; Provisional

Probab=99.25  E-value=1.9e-10  Score=108.15  Aligned_cols=185  Identities=14%  Similarity=0.148  Sum_probs=107.5

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCC-------------ccccCCCcc---eeeccchhcccCcceeec
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG-------------VMVGMGQKD---AYVGDEAQSKRGILTLKY   71 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~-------------~~~~~~~~~---~~vg~~~~~~~~~~~~~~   71 (377)
                      .++.||+|-.+||+-....   ...+|+.++......             ..+..++..   +++|+++......  ...
T Consensus         3 ~v~~iDiG~g~tK~~~~~~---~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~v~v~g~~~~~y~~G~~~~~~~~~--~~~   77 (344)
T PRK13917          3 YVMALDFGNGFVKGKINDE---KFVIPSRYGRKTNENNQLSGFVDNKLDVSEFIINGNEDEVLLFGNDLDKTTNT--GKD   77 (344)
T ss_pred             eEEEEeccCCeEEEEecCC---CEEcceeccCCCCccccccccCCCCCcceEEEecCcccccEEEcchhhhcccc--cCC
Confidence            4899999999999866421   124466554322111             111122333   7788775332110  001


Q ss_pred             ccc-CCccCCHHHHHHHHHHhcccccccC--CCCCcEEE--eeCCCCCHHh-HHHHHhhcccc-----------CCCCeE
Q 017089           72 PIE-HGIVSNWDDMEKIWHHTFYNELRVA--PEEHPVLL--TEAPLNPKAN-REKMTQIMFET-----------FNTPAM  134 (377)
Q Consensus        72 p~~-~g~i~d~~~~~~~~~~~~~~~L~~~--~~~~~vvl--~~~~~~~~~~-~~~l~~~lfe~-----------~~~~~v  134 (377)
                      +.. ++.. .-+..+.++..++...+...  .+...++|  -.|...-... ++.+.+.+-..           ..+..|
T Consensus        78 ~~~~~~~y-~~~~y~~L~~~Al~~~~~~~~~~~~~~v~l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V  156 (344)
T PRK13917         78 TYSTNDRY-DIKQFKTLVKCALAGLAARTVPEEVVEVVVATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGV  156 (344)
T ss_pred             cccccccc-cchhHHHHHHHHHHHhhhhhcCCCcceeEEEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEE
Confidence            110 1111 12356666666642222221  12223333  4555442222 34555443221           346678


Q ss_pred             EeeecccccccccCC-------------ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHc
Q 017089          135 YVAIQAVLSLYASGR-------------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER  198 (377)
Q Consensus       135 ~~~~~~~~a~~~~g~-------------~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~  198 (377)
                      .++++|++|.+....             ...+|||||+.+|+++.+.++.+........+.|..++.+.+.+.+..+
T Consensus       157 ~V~pQ~~ga~~~~~~~~~g~~~~~~~~~~~ilvIDIG~~TtD~~v~~~~~~~~~~s~s~~~G~~~~~~~I~~~i~~~  233 (344)
T PRK13917        157 KVVAQPMGTLLDLYLDNDGVVADKAFEEGKVSVIDFGSGTTDLDTIQNLKRVEEESFVIPKGTIDVYKRIASHISKK  233 (344)
T ss_pred             EEecccHHHHHHHHhcccCcccchhcccCcEEEEEcCCCcEEEEEEeCcEEcccccccccchHHHHHHHHHHHHHhh
Confidence            999999988764421             3569999999999999999999987777779999999999999999543

>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=99.23  E-value=6.2e-11  Score=115.49  Aligned_cols=219  Identities=16%  Similarity=0.180  Sum_probs=129.2

Q ss_pred             CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC----------ceEEEEeCCCCceEEEEeeCCc
Q 017089          102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVSHTVPIYEGY  171 (377)
Q Consensus       102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~----------~~~lVVDiG~~~t~i~~v~~g~  171 (377)
                      -..+++++|+++.+.+|+.+++.+ .-+|...++++++..++|+.+|.          +.-++.|+|+++|+++.|..-.
T Consensus       158 Ikd~ViTVP~~F~qaeR~all~Aa-~iagl~vLqLind~~a~Al~ygv~rRk~i~~~~q~~i~YDMGs~sT~Ativsy~~  236 (902)
T KOG0104|consen  158 IKDMVITVPPFFNQAERRALLQAA-QIAGLNVLQLINDGTAVALNYGVFRRKEINETPQHYIFYDMGSGSTSATIVSYQL  236 (902)
T ss_pred             hhheEEeCCcccCHHHHHHHHHHH-HhcCchhhhhhccchHHHhhhhhhccccCCCCceEEEEEecCCCceeEEEEEEEe
Confidence            456999999999999999999998 88999999999999999999874          4679999999999999885322


Q ss_pred             cccc-------------ceEEecccHHHHHHHHHHHHHHcCC-------Cccchh-----HHHHHHHHHHhccceecCHH
Q 017089          172 ALPH-------------AILRLDLAGRDLTDALMKILTERGY-------SFTTTA-----EREIVRDMKEKLAYIALDYE  226 (377)
Q Consensus       172 ~~~~-------------~~~~~~~GG~~l~~~l~~~l~~~~~-------~~~~~~-----~~~~~~~ik~~~~~v~~~~~  226 (377)
                      +-..             ..-...+||..++..|..+|...-.       +..+..     -...++++|.=++.-+ +.-
T Consensus       237 v~~k~~g~~~p~i~~~gvGfd~tLGG~e~~~rLr~~l~~~F~~~~k~~~dv~~nprAmaKl~keA~R~K~vLSANs-ea~  315 (902)
T KOG0104|consen  237 VKTKEQGGKQPQIQVLGVGFDRTLGGLEMTMRLRDHLANEFNEQHKTKKDVHTNPRAMAKLNKEAERLKQVLSANS-EAF  315 (902)
T ss_pred             eccccccCccceEEEEeeccCCccchHHHHHHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHHHHHHHhhcch-hhH
Confidence            1111             1113378999999999999864311       111100     0223444444332110 000


Q ss_pred             HHHHHhccCCCcceEEEcCCCcEEeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCC
Q 017089          227 QELETAKTSSAVEKSYELPDGQVITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGS  305 (377)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~  305 (377)
                      ..++.+-    ....|.+      .|..+.|. .++=|+.         .+.+-|.+++.+...  --.-++.|||.||+
T Consensus       316 aqIEsL~----ddiDFr~------kvTRe~fEelc~Dl~~---------r~~~Pi~dAl~~a~l--~ldeIn~ViL~Gg~  374 (902)
T KOG0104|consen  316 AQIESLI----DDIDFRL------KVTREEFEELCADLEE---------RIVEPINDALKKAQL--SLDEINQVILFGGA  374 (902)
T ss_pred             HHHHHHh----hcccccc------ceeHHHHHHHHHHHHH---------hhhhhHHHHHHhcCC--ChhhhheeEEecCc
Confidence            0111110    1122222      12222221 1222221         244555555554321  11245789999999


Q ss_pred             cCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017089          306 TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       306 s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      |++|-+.+-|++-+...       ++...-+.+-++-.||...|.
T Consensus       375 TRVP~VQe~l~k~v~~~-------ei~knlNaDEA~vmGav~~aA  412 (902)
T KOG0104|consen  375 TRVPKVQETLIKAVGKE-------ELGKNLNADEAAVMGAVYQAA  412 (902)
T ss_pred             ccCchHHHHHHHHHhHH-------HHhcccChhHHHHHHHHHHHH
Confidence            99997777766555422       122222446677777766654

>TIGR03739 PRTRC_D PRTRC system protein D

Probab=99.19  E-value=3.6e-10  Score=105.48  Aligned_cols=183  Identities=12%  Similarity=0.059  Sum_probs=114.9

Q ss_pred             EeCCCCceEEeeeCC-CCC-CCCCCceeEecCCCC------------ccccCCCcceeeccchhcccCcceeeccccCCc
Q 017089           12 CDNGTGMVKAGFAGD-DAP-RAVFPSIVGRPRHTG------------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI   77 (377)
Q Consensus        12 iD~Gs~~~k~G~~~~-~~P-~~~~p~~~~~~~~~~------------~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~   77 (377)
                      ||+|-.++|+-+... ..+ ...+||.++......            .....++..++||+.+...... ...+-+.+..
T Consensus         2 iDvGyg~~K~~~~~~~~~~~~~~fPS~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~y~VG~~a~~~~~~-~~~~~~~~~~   80 (320)
T TIGR03739         2 VDVGYGNTKFVSQVRGTDIRCASFPSVAPPSSRESPAWPGGSEARKTVCVPVGGLFYEVGPDVSLAADT-NRARQLHDEY   80 (320)
T ss_pred             ccccCCceEEEecCCCCceeeEEcccccccccccccccccccCCCceEEEEECCEEEEeccchhhcccC-ccceeccccc
Confidence            899999999876532 232 246777764422111            1112345677888776332110 0111122222


Q ss_pred             cCCHHHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhcccc--------CCCCeEEeeeccccccccc--
Q 017089           78 VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET--------FNTPAMYVAIQAVLSLYAS--  147 (377)
Q Consensus        78 i~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~--------~~~~~v~~~~~~~~a~~~~--  147 (377)
                      ..+ +....++.+++.. ... .....+++-.|...-..+++.+.+.+-..        ..+..|.++|+|+.|.+..  
T Consensus        81 ~~~-~~~~~L~~~Al~~-~~~-~~~~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~  157 (320)
T TIGR03739        81 TET-PEYMALLRGALAL-SKV-REIDQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVA  157 (320)
T ss_pred             cCC-HHHHHHHHHHHHH-hcC-CCCCEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHh
Confidence            222 3455555555522 222 12224666677776667778887776432        4678899999999886643  


Q ss_pred             -------CCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHc
Q 017089          148 -------GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER  198 (377)
Q Consensus       148 -------g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~  198 (377)
                             ...+.+|||+|+.+|+++.+.++.+......+.+.|...+.+.+.+.+.++
T Consensus       158 ~~~~~~~~~~~~lVIDIG~~TtD~~~~~~~~~~~~~s~s~~~G~~~~~~~I~~~i~~~  215 (320)
T TIGR03739       158 QHGKLLTGKEQSLIIDPGYFTFDWLVARGMRLVQKRSGSVNGGMSDIYRLLAAEISKD  215 (320)
T ss_pred             cCCCcccCcCcEEEEecCCCeeeeehccCCEEcccccCCchhHHHHHHHHHHHHHHhh
Confidence                   234679999999999999888888877666678999999999999998654

A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.

>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A

Probab=99.17  E-value=6.2e-10  Score=104.91  Aligned_cols=185  Identities=21%  Similarity=0.297  Sum_probs=109.1

Q ss_pred             CHHHHHHHHHHhcccccccCCCC-----------------CcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccc
Q 017089           80 NWDDMEKIWHHTFYNELRVAPEE-----------------HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL  142 (377)
Q Consensus        80 d~~~~~~~~~~~~~~~L~~~~~~-----------------~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~  142 (377)
                      +.+.++..+++=..+.+..+.++                 ..|+++.   .++...+.+++++ +.+|..-..+=-++.|
T Consensus        86 ~~~el~~~I~~Ea~~~iP~~~~e~~~D~~vl~~~~~~~~~~~Vll~A---a~k~~v~~~~~~~-~~aGL~~~~vDv~~~A  161 (340)
T PF11104_consen   86 PEKELEEAIRWEAEQYIPFPLEEVVFDYQVLGESEDGEEKMEVLLVA---APKEIVESYVELF-EEAGLKPVAVDVEAFA  161 (340)
T ss_dssp             -HHHHHHHHHHHHGGG-SS----EEEEEEESS-GS-TTSEEEEEEEE---EEHHHHHHHHHHH-HHTT-EEEEEEEHHHH
T ss_pred             CHHHHHHHHHHHHHhhCCCChhHeEEEEEEeccCCCCCCceEEEEEE---EcHHHHHHHHHHH-HHcCCceEEEeehHHH
Confidence            44667777776655666554322                 2344442   2566777777665 7788876555444433


Q ss_pred             --ccccc---------CCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHH
Q 017089          143 --SLYAS---------GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV  211 (377)
Q Consensus       143 --a~~~~---------g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~  211 (377)
                        -++..         ...+.++||||++.|.++.+.+|.++  ..+.+++||+++++.+.+.+         ..+.+.+
T Consensus       162 l~r~~~~~~~~~~~~~~~~~~~lvdiG~~~t~~~i~~~g~~~--f~R~i~~G~~~l~~~i~~~~---------~i~~~~A  230 (340)
T PF11104_consen  162 LARLFEFLEPQLPDEEDAETVALVDIGASSTTVIIFQNGKPI--FSRSIPIGGNDLTEAIAREL---------GIDFEEA  230 (340)
T ss_dssp             GGGGGHHHHHTST----T-EEEEEEE-SS-EEEEEEETTEEE--EEEEES-SHHHHHHHHHHHT---------T--HHHH
T ss_pred             HHHHHHHHHHhCCcccccceEEEEEecCCeEEEEEEECCEEE--EEEEEeeCHHHHHHHHHHhc---------CCCHHHH
Confidence              33332         12356999999999999999999998  77889999999999998776         1245667


Q ss_pred             HHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHH
Q 017089          212 RDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDI  291 (377)
Q Consensus       212 ~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~  291 (377)
                      +.+|.+... +.+...+                              +-+.+++.         |.+-|.++++-+-...
T Consensus       231 e~~k~~~~l-~~~~~~~------------------------------~l~~~~~~---------l~~EI~rsl~~y~~~~  270 (340)
T PF11104_consen  231 EELKRSGGL-PEEYDQD------------------------------ALRPFLEE---------LAREIRRSLDFYQSQS  270 (340)
T ss_dssp             HHHHHHT-------HHH------------------------------HHHHHHHH---------HHHHHHHHHHHHHHH-
T ss_pred             HHHHhcCCC-CcchHHH------------------------------HHHHHHHH---------HHHHHHHHHHHHHhcC
Confidence            777765432 1111000                              00111111         5566666666544444


Q ss_pred             HHHhhcCcccccCCcCCcChHHHHHHHH
Q 017089          292 RKDLYGNIVLSGGSTMFPGIADRMSKEI  319 (377)
Q Consensus       292 ~~~l~~nIil~GG~s~i~gl~~rl~~eL  319 (377)
                      ...-++.|+||||+|+++||.+.|+++|
T Consensus       271 ~~~~i~~I~L~Ggga~l~gL~~~l~~~l  298 (340)
T PF11104_consen  271 GGESIERIYLSGGGARLPGLAEYLSEEL  298 (340)
T ss_dssp             -----SEEEEESGGGGSTTHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccchhhHHHHHHHHH
Confidence            4556788999999999999999999999

>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]

Probab=99.13  E-value=1.2e-11  Score=102.42  Aligned_cols=237  Identities=18%  Similarity=0.187  Sum_probs=148.0

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCC-CCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHH
Q 017089            4 TEDIQPLVCDNGTGMVKAGFAGDD-APRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD   82 (377)
Q Consensus         4 ~~~~~~vviD~Gs~~~k~G~~~~~-~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~   82 (377)
                      +++.-.|.+|+|+..+..-.-..+ .|-..                                 .++.-+-+++|.+.|+-
T Consensus        26 d~sk~~vGVDLGT~~iV~~vlD~d~~Pvag---------------------------------~~~~advVRDGiVvdf~   72 (277)
T COG4820          26 DESKLWVGVDLGTCDIVSMVLDRDGQPVAG---------------------------------CLDWADVVRDGIVVDFF   72 (277)
T ss_pred             ccCceEEEeecccceEEEEEEcCCCCeEEE---------------------------------EehhhhhhccceEEehh
Confidence            444667899999999886544322 34211                                 01112334677777753


Q ss_pred             ----HHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCC
Q 017089           83 ----DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG  158 (377)
Q Consensus        83 ----~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG  158 (377)
                          .++++.+.+ .+.|++...  ..--..||-......+....+ +|..|....+.+++|.|+++-.+.+++-|||+|
T Consensus        73 eaveiVrrlkd~l-Ek~lGi~~t--ha~taiPPGt~~~~~ri~iNV-iESAGlevl~vlDEPTAaa~vL~l~dg~VVDiG  148 (277)
T COG4820          73 EAVEIVRRLKDTL-EKQLGIRFT--HAATAIPPGTEQGDPRISINV-IESAGLEVLHVLDEPTAAADVLQLDDGGVVDIG  148 (277)
T ss_pred             hHHHHHHHHHHHH-HHhhCeEee--eccccCCCCccCCCceEEEEe-ecccCceeeeecCCchhHHHHhccCCCcEEEeC
Confidence                334444444 466766532  222333444433333333333 499999999999999999999999999999999


Q ss_pred             CCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCc
Q 017089          159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAV  238 (377)
Q Consensus       159 ~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~  238 (377)
                      +++|-|+.+-+|.++  .....+.||.+++--|.-   .+++      +.+.+|++|+..-.-                 
T Consensus       149 GGTTGIsi~kkGkVi--y~ADEpTGGtHmtLvlAG---~ygi------~~EeAE~~Kr~~k~~-----------------  200 (277)
T COG4820         149 GGTTGISIVKKGKVI--YSADEPTGGTHMTLVLAG---NYGI------SLEEAEQYKRGHKKG-----------------  200 (277)
T ss_pred             CCcceeEEEEcCcEE--EeccCCCCceeEEEEEec---ccCc------CHhHHHHhhhccccc-----------------
Confidence            999999999999998  445678899887655431   1222      345677777643110                 


Q ss_pred             ceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHH
Q 017089          239 EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKE  318 (377)
Q Consensus       239 ~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~e  318 (377)
                               +      |-|-.-...++         .+.+.+.+-|...++       ..+.|+||.+..||+++-++++
T Consensus       201 ---------~------Eif~~v~PV~e---------KMAeIv~~hie~~~i-------~dl~lvGGac~~~g~e~~Fe~~  249 (277)
T COG4820         201 ---------E------EIFPVVKPVYE---------KMAEIVARHIEGQGI-------TDLWLVGGACMQPGVEELFEKQ  249 (277)
T ss_pred             ---------h------hcccchhHHHH---------HHHHHHHHHhccCCC-------cceEEecccccCccHHHHHHHH
Confidence                     0      00100011111         155666666665554       4689999999999999999999


Q ss_pred             HHhhCCCCceEEEECCCCCccccchh
Q 017089          319 ITALAPSSMKIKVVAPPERKYSVWIG  344 (377)
Q Consensus       319 L~~~~~~~~~v~v~~~~~~~~~~w~G  344 (377)
                      |        ...|+.|..|.|-.=+|
T Consensus       250 l--------~l~v~~P~~p~y~TPLg  267 (277)
T COG4820         250 L--------ALQVHLPQHPLYMTPLG  267 (277)
T ss_pred             h--------ccccccCCCcceechhh
Confidence            8        23555554454444344

>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=99.09  E-value=2e-09  Score=104.67  Aligned_cols=232  Identities=13%  Similarity=0.149  Sum_probs=139.1

Q ss_pred             CCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC------------ceEEEEeCCCCceEEEEee
Q 017089          101 EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVSHTVPIY  168 (377)
Q Consensus       101 ~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~~~lVVDiG~~~t~i~~v~  168 (377)
                      .-..++|.+|.++...+|..+++++ ...|+.-+.++++..|+++++|.            .+...||+||+.++++...
T Consensus       136 ~v~DcvIavP~~FTd~qRravldAA-~iagLn~lrLmnd~TA~Al~ygiyKtDLP~~~ekpr~v~fvD~GHS~~q~si~a  214 (727)
T KOG0103|consen  136 PVSDCVIAVPSYFTDSQRRAVLDAA-RIAGLNPLRLMNDTTATALAYGIYKTDLPENEEKPRNVVFVDIGHSSYQVSIAA  214 (727)
T ss_pred             CCCCeeEeccccccHHHHHHHHhHH-hhcCccceeeeecchHhHhhcccccccCCCcccCcceEEEEecccccceeeeee
Confidence            3467999999999999999999998 88999999999999999999984            3588999999998877553


Q ss_pred             --CCccc-ccceEEecccHHHHHHHHHHHHHHc---CCCccc--hhH-----HHHHHHHHHhccceecCHHHHHHHhccC
Q 017089          169 --EGYAL-PHAILRLDLAGRDLTDALMKILTER---GYSFTT--TAE-----REIVRDMKEKLAYIALDYEQELETAKTS  235 (377)
Q Consensus       169 --~g~~~-~~~~~~~~~GG~~l~~~l~~~l~~~---~~~~~~--~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~  235 (377)
                        .|..- ..+...-.+||+++++.|.+++...   .+.+.-  ...     ...++++|+.+..- .            
T Consensus       215 F~kG~lkvl~ta~D~~lGgr~fDe~L~~hfa~efk~kykidv~sn~kA~lRL~~~~EKlKK~lSAN-~------------  281 (727)
T KOG0103|consen  215 FTKGKLKVLATAFDRKLGGRDFDEALIDHFAKEFKTKYKIDVRSNAKAKLRLLAECEKLKKVLSAN-T------------  281 (727)
T ss_pred             eccCcceeeeeecccccccchHHHHHHHHHHHHhccccccchhhchhHHHHHHHHHHHHHHHhhcC-c------------
Confidence              44322 2222344899999999999998653   222211  111     23456666655421 0            


Q ss_pred             CCcceEEEc---CCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHH---------HHHhhcCccccc
Q 017089          236 SAVEKSYEL---PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDI---------RKDLYGNIVLSG  303 (377)
Q Consensus       236 ~~~~~~~~~---p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~---------~~~l~~nIil~G  303 (377)
                         ..+..+   =+...+.-.-.|-.                 .-+++...+.++...+         ...-++-|=++|
T Consensus       282 ---~~plNIEcfM~d~dvs~~i~ReE-----------------fEel~~plL~rv~~p~~~~l~d~~l~~edi~~VEiVG  341 (727)
T KOG0103|consen  282 ---ELPLNIECFMNDKDVSSKIKREE-----------------FEELSAPLLERVEVPLLKALADAKLKVEDIHAVEIVG  341 (727)
T ss_pred             ---CCCcchhheeecchhhhhccHHH-----------------HHHHHHHHHHhhhHHHHHHHHHhcCccccceeEEEec
Confidence               000100   00000000001111                 1122222222222211         222334688999


Q ss_pred             CCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhccc--ccccccccHHHHhhcCCccccc
Q 017089          304 GSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLS--TFQQMWIAKAEYDESGPSIVHR  374 (377)
Q Consensus       304 G~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~--~~~~~~itr~~y~e~G~~~~~~  374 (377)
                      |+|+||-+++.|.+-...-+.    .    .-+.+.++-+|+++-...-  .|.-.|.+.+|-..+-.++-|+
T Consensus       342 g~sripaike~Is~~Fgke~s----~----TlN~dEavarG~ALqcAIlSP~frVRef~v~Di~pysIs~~w~  406 (727)
T KOG0103|consen  342 GLSRIPAIKEMISDFFGKELS----R----TLNQDEAVARGAALQCAILSPTFRVREFSVEDIVPYSISLRWV  406 (727)
T ss_pred             CcccchHHHHHHHHHhCCccc----c----cccHHHHHHHhHHHHHHhcCccccceecceecccceeEEEEec
Confidence            999999888888764433221    1    2244677888887776643  4666666666655555544443

>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]

Probab=98.89  E-value=3.7e-08  Score=88.45  Aligned_cols=118  Identities=19%  Similarity=0.240  Sum_probs=82.1

Q ss_pred             EEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHH
Q 017089          152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET  231 (377)
Q Consensus       152 ~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~  231 (377)
                      ..|+|||++.|.++.+.+|+++  ..+..++||+++++.+.+..         ..+...++++|...... .++..+.-.
T Consensus       195 vav~~Igat~s~l~vi~~gk~l--y~r~~~~g~~Qlt~~i~r~~---------~L~~~~a~~~k~~~~~P-~~y~~~vl~  262 (354)
T COG4972         195 VAVFDIGATSSELLVIQDGKIL--YTREVPVGTDQLTQEIQRAY---------SLTEEKAEEIKRGGTLP-TDYGSEVLR  262 (354)
T ss_pred             heeeeecccceEEEEEECCeee--eEeeccCcHHHHHHHHHHHh---------CCChhHhHHHHhCCCCC-CchhHHHHH
Confidence            4699999999999999999999  77889999999999988666         11345577777765532 232221100


Q ss_pred             hccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcCh
Q 017089          232 AKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI  311 (377)
Q Consensus       232 ~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl  311 (377)
                                                        |     ....|.+-|.++|+-+-.----.-+..|+|.||++.+.|+
T Consensus       263 ----------------------------------~-----f~~~l~~ei~Rslqfy~~~s~~~~id~i~LaGggA~l~gL  303 (354)
T COG4972         263 ----------------------------------P-----FLGELTQEIRRSLQFYLSQSEMVDIDQILLAGGGASLEGL  303 (354)
T ss_pred             ----------------------------------H-----HHHHHHHHHHHHHHHHHhccccceeeEEEEecCCcchhhH
Confidence                                              0     0112566666677643111122345689999999999999


Q ss_pred             HHHHHHHHH
Q 017089          312 ADRMSKEIT  320 (377)
Q Consensus       312 ~~rl~~eL~  320 (377)
                      .+.+++.|.
T Consensus       304 ~~~i~qrl~  312 (354)
T COG4972         304 AAAIQQRLS  312 (354)
T ss_pred             HHHHHHHhC
Confidence            999999984

>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=98.72  E-value=5.9e-07  Score=85.42  Aligned_cols=211  Identities=18%  Similarity=0.260  Sum_probs=127.9

Q ss_pred             CcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCc-----eEEEEeCCCCceEEEE--eeCCcccc-
Q 017089          103 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVP--IYEGYALP-  174 (377)
Q Consensus       103 ~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~-----~~lVVDiG~~~t~i~~--v~~g~~~~-  174 (377)
                      ...++++|.+++..+|+..-... .-+|...+..+++|.+|++++|..     .-.|.|+|+++.+|+.  |.+|.-.. 
T Consensus       161 ~~avvtvpAyfndsqRqaTkdag-~iagl~vlrvineptaaalaygld~k~~g~iaV~dLgggtfdisilei~~gvfevk  239 (640)
T KOG0102|consen  161 KNAVITVPAYFNDSQRQATKDAG-QIAGLNVLRVINEPTAAALAYGLDKKEDGVIAVFDLGGGTFDISILEIEDGVFEVK  239 (640)
T ss_pred             hheeeccHHHHhHHHHHHhHhhh-hhccceeeccCCccchhHHhhcccccCCCceEEEEcCCceeeeeeehhccceeEEE
Confidence            45899999999999998765554 789999999999999999999863     5689999999977764  46775432 


Q ss_pred             cceEEecccHHHHHHHHHHHHHHc-----CCCccchhHHHHHHHHHH-------hccceecCHHHHHHHhccCCCcceEE
Q 017089          175 HAILRLDLAGRDLTDALMKILTER-----GYSFTTTAEREIVRDMKE-------KLAYIALDYEQELETAKTSSAVEKSY  242 (377)
Q Consensus       175 ~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~~~~~~~ik~-------~~~~v~~~~~~~~~~~~~~~~~~~~~  242 (377)
                      ........||.+++..+..++-..     ++++.  .+...+..+++       .++...            ......+|
T Consensus       240 sTngdtflggedfd~~~~~~~v~~fk~~~gidl~--kd~~a~qrl~eaaEkaKielSs~~------------~tei~lp~  305 (640)
T KOG0102|consen  240 STNGDTHLGGEDFDNALVRFIVSEFKKEEGIDLT--KDRMALQRLREAAEKAKIELSSRQ------------QTEINLPF  305 (640)
T ss_pred             eccCccccChhHHHHHHHHHHHHhhhcccCcchh--hhHHHHHHHHHHHHhhhhhhhhcc------------cceeccce
Confidence            233456789999999998877432     32222  23333333332       222110            01112233


Q ss_pred             EcCCC---cEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHH-----HhhcCcccccCCcCCcChHHH
Q 017089          243 ELPDG---QVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK-----DLYGNIVLSGGSTMFPGIADR  314 (377)
Q Consensus       243 ~~p~~---~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~-----~l~~nIil~GG~s~i~gl~~r  314 (377)
                      .-.|.   .-+.+...|-.+.|+             +..+|.+.|.-|..++|.     .-++.|+++||.+++|-..+.
T Consensus       306 iTada~gpkh~~i~~tr~efe~~-------------v~~lI~Rti~p~~~aL~dA~~~~~di~EV~lvggmtrmpkv~s~  372 (640)
T KOG0102|consen  306 ITADASGPKHLNIELTRGEFEEL-------------VPSLIARTIEPCKKALRDASLSSSDINEVILVGGMTRMPKVQST  372 (640)
T ss_pred             eeccCCCCeeEEEeecHHHHHHh-------------hHHHHHhhhhHHHHHHHhccCChhhhhhhhhhcchhhcHHHHHH
Confidence            32232   333444444444333             455666666655444443     455679999999999965555


Q ss_pred             HHHHHHhhCCCCceEEEECCCCCccccchhhhhhh
Q 017089          315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       315 l~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      ++ |+-..-|..       .-+|+-++-.||++-+
T Consensus       373 V~-e~fgk~p~~-------~vnPdeava~GAaiqg  399 (640)
T KOG0102|consen  373 VK-ELFGKGPSK-------GVNPDEAVAGGAAIQG  399 (640)
T ss_pred             HH-HHhCCCCCC-------CcCCcchhccchhhcc
Confidence            54 232222221       1245556666655543

>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []

Probab=98.43  E-value=6.9e-07  Score=83.31  Aligned_cols=70  Identities=19%  Similarity=0.200  Sum_probs=50.6

Q ss_pred             cCCCCeEEeeeccccccccc-----CCceEEEEeCCCCceEEEEeeCCcccc-cceEEecccHHHHHHHHHHHHHH
Q 017089          128 TFNTPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALP-HAILRLDLAGRDLTDALMKILTE  197 (377)
Q Consensus       128 ~~~~~~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~i~~v~~g~~~~-~~~~~~~~GG~~l~~~l~~~l~~  197 (377)
                      .+.+..|.+.|++++|.|..     .....+|||||+.+|+++.|.++.... .+....++|-..+.+.+.+.|..
T Consensus       137 ~i~I~~V~V~PQ~~~A~~~~~~~~~~~~~~lVVDIGG~T~Dv~~v~~~~~~~~~~~~~~~~Gvs~~~~~I~~~l~~  212 (318)
T PF06406_consen  137 TITIKDVEVFPQSVGAVFDALMDLDEDESVLVVDIGGRTTDVAVVRGGLPDISKCSGTPEIGVSDLYDAIAQALRS  212 (318)
T ss_dssp             --EEEEEEEEESSHHHHHHHHHTS-TTSEEEEEEE-SS-EEEEEEEGGG--EEEEEEETTSSTHHHHHHHHHHTT-
T ss_pred             eEEEeeEEEEcccHHHHHHHHHhhcccCcEEEEEcCCCeEEeeeecCCccccchhccCCchhHHHHHHHHHHHHHH
Confidence            34477999999999998764     236789999999999999998765443 33345688999999999988855

They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.

>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional

Probab=98.28  E-value=3.1e-06  Score=80.58  Aligned_cols=163  Identities=16%  Similarity=0.180  Sum_probs=100.0

Q ss_pred             CCCCCCCCcEEEeCCCCceEEeeeC----CCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCC
Q 017089            1 MADTEDIQPLVCDNGTGMVKAGFAG----DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG   76 (377)
Q Consensus         1 ~~~~~~~~~vviD~Gs~~~k~G~~~----~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g   76 (377)
                      ||+ ++-..|.||+||+||.+=|+.    +..+....|.+.-                 +..+..-+..  -...|+...
T Consensus         1 ~~~-~~i~SVGIDIGTsTTqlvfSrl~l~n~a~~~~vpr~~I-----------------~dkev~yrS~--i~fTPl~~~   60 (475)
T PRK10719          1 MMT-EELLSVGIDIGTTTTQVIFSRLELENRASVFQVPRIEI-----------------IDKEIIYRSP--IYFTPLLKQ   60 (475)
T ss_pred             CCc-cEEEEEEEeccCceEEEEEEEEEEecccccccCceEEE-----------------eeeEEEEecC--ceecCCCCC
Confidence            454 667789999999999998873    2223233332211                 1111111111  135688888


Q ss_pred             ccCCHHHHHHHHHHhcccccccCCC--CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEee-----------eccccc
Q 017089           77 IVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-----------IQAVLS  143 (377)
Q Consensus        77 ~i~d~~~~~~~~~~~~~~~L~~~~~--~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~-----------~~~~~a  143 (377)
                      ...|-++++.+++.-| +.-++.++  +..+.++.-.....++.++.++.    ++...=-|+           -.++++
T Consensus        61 ~~ID~~~i~~~V~~ey-~~Agi~~~die~~ahIITg~~~~~~Nl~~~v~~----~~~~~gdfVVA~AG~~le~iva~~AS  135 (475)
T PRK10719         61 GEIDEAAIKELIEEEY-QKAGIAPESIDSGAVIITGETARKENAREVVMA----LSGSAGDFVVATAGPDLESIIAGKGA  135 (475)
T ss_pred             ccccHHHHHHHHHHHH-HHcCCCHHHccccEEEEEechhHHHHHHHHHHH----hcccccceeeeccCccHHHhhhHHHh
Confidence            8889999999999887 66777654  34455554444444444444443    221111111           113333


Q ss_pred             cccc----CCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHH
Q 017089          144 LYAS----GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDA  190 (377)
Q Consensus       144 ~~~~----g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~  190 (377)
                      +.+.    .....++||||+++|+++.+.+|.++  +...+++||++++..
T Consensus       136 g~avLseEke~gVa~IDIGgGTT~iaVf~~G~l~--~T~~l~vGG~~IT~D  184 (475)
T PRK10719        136 GAQTLSEERNTRVLNIDIGGGTANYALFDAGKVI--DTACLNVGGRLIETD  184 (475)
T ss_pred             hHHHhhhhccCceEEEEeCCCceEEEEEECCEEE--EEEEEecccceEEEC
Confidence            2221    12578999999999999999999988  667799999987765

>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative

Probab=98.27  E-value=2.3e-05  Score=70.47  Aligned_cols=43  Identities=30%  Similarity=0.611  Sum_probs=35.9

Q ss_pred             CcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhh
Q 017089          298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL  348 (377)
Q Consensus       298 nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~  348 (377)
                      .|+++||.++.+++.+.+.+.|        ...+..++++.+..-+||+++
T Consensus       206 ~Vvl~GGva~n~~l~~~l~~~l--------g~~v~~~~~~~~~~AlGaAl~  248 (248)
T TIGR00241       206 PIVFTGGVSKNKGLVKALEKKL--------GMKVITPPEPQIVGAVGAALL  248 (248)
T ss_pred             CEEEECccccCHHHHHHHHHHh--------CCcEEcCCCccHHHHHHHHhC
Confidence            7999999999999999999888        235666777888888898764

This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.

>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit

Probab=98.06  E-value=1e-05  Score=73.12  Aligned_cols=48  Identities=17%  Similarity=0.375  Sum_probs=39.6

Q ss_pred             hhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEE-CCCCCccccchhhhhhhc
Q 017089          295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVV-APPERKYSVWIGGSILAS  350 (377)
Q Consensus       295 l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~-~~~~~~~~~w~Gasi~a~  350 (377)
                      +-..|+++||.++-+|+.+.|++.|..        ++. .+++|++..-+||+++|.
T Consensus       239 i~~~v~~~GGva~N~~l~~al~~~Lg~--------~v~~~p~~p~~~GAlGAAL~A~  287 (293)
T TIGR03192       239 VEEGFFITGGIAKNPGVVKRIERILGI--------KAVDTKIDSQIAGALGAALFGY  287 (293)
T ss_pred             CCCCEEEECcccccHHHHHHHHHHhCC--------CceeCCCCccHHHHHHHHHHHH
Confidence            446799999999999999999998832        333 366789999999999984

Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.

>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]

Probab=98.04  E-value=6.2e-05  Score=69.34  Aligned_cols=45  Identities=27%  Similarity=0.436  Sum_probs=40.7

Q ss_pred             cccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          299 IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       299 Iil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ||++||.++..++.+.+.+.|        ..+|+.||++++.--.||+++|+-
T Consensus       346 iv~~GGva~n~av~~ale~~l--------g~~V~vP~~~ql~GAiGAAL~a~~  390 (396)
T COG1924         346 IVLQGGVALNKAVVRALEDLL--------GRKVIVPPYAQLMGAIGAALIAKE  390 (396)
T ss_pred             EEEECcchhhHHHHHHHHHHh--------CCeeecCCccchhhHHHHHHHHhh
Confidence            999999999999999999888        457888999999999999998864

>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15

Probab=97.98  E-value=1.3e-05  Score=75.34  Aligned_cols=47  Identities=28%  Similarity=0.545  Sum_probs=40.5

Q ss_pred             hcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017089          296 YGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       296 ~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      -+.|+++||.++.+|+.+.|++.|.        .+++-|++|++..-+||+++|+
T Consensus       356 ~~~VvftGGva~N~gvv~ale~~Lg--------~~iivPe~pq~~GAiGAAL~A~  402 (404)
T TIGR03286       356 REPVILVGGTSLIEGLVKALGDLLG--------IEVVVPEYSQYIGAVGAALLAS  402 (404)
T ss_pred             CCcEEEECChhhhHHHHHHHHHHhC--------CcEEECCcccHHHHHHHHHHhc
Confidence            3459999999999999999998883        3566688999999999999985

Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.

>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D

Probab=97.92  E-value=3.5e-05  Score=68.80  Aligned_cols=50  Identities=20%  Similarity=0.446  Sum_probs=41.0

Q ss_pred             cCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhh
Q 017089          297 GNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       297 ~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      .+|+++||.++-+++.+.|+++|...   ...+.+..+++|++..-+||++++
T Consensus       213 ~~v~~~GGva~n~~~~~~le~~l~~~---~~~~~v~~~~~~q~~gAlGAAl~~  262 (262)
T TIGR02261       213 GTVLCTGGLALDAGLLEALKDAIQEA---KMAVAAENHPDAIYAGAIGAALWG  262 (262)
T ss_pred             CcEEEECcccccHHHHHHHHHHhccC---CcceEecCCCcchHHHHHHHHHcC
Confidence            36999999999999999999999543   124556667889999999999875

This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.

>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon

Probab=97.58  E-value=0.00026  Score=67.70  Aligned_cols=174  Identities=17%  Similarity=0.248  Sum_probs=110.4

Q ss_pred             CCcEEEeCCCCceEEeeeC----CCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHH
Q 017089            7 IQPLVCDNGTGMVKAGFAG----DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD   82 (377)
Q Consensus         7 ~~~vviD~Gs~~~k~G~~~----~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~   82 (377)
                      ...|.||+||+||.+=|+.    +..+....|...-                 ++.+..-+..  -...|+......|-+
T Consensus         3 i~SVGIDIGTSTTQlvfSrl~l~n~a~~~~vPri~I-----------------~dkeViYrS~--I~fTPl~~~~~ID~~   63 (473)
T PF06277_consen    3 ILSVGIDIGTSTTQLVFSRLTLENRASGFSVPRIEI-----------------VDKEVIYRSP--IYFTPLLSQTEIDAE   63 (473)
T ss_pred             eEEEEEeecCCceeEEEEEeEEEeccCCCccceEEE-----------------eccEEEecCC--ccccCCCCCCccCHH
Confidence            4579999999999998874    2223333333321                 1111111111  134688888888999


Q ss_pred             HHHHHHHHhcccccccCCC--CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEe---eecccccccccCC--------
Q 017089           83 DMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV---AIQAVLSLYASGR--------  149 (377)
Q Consensus        83 ~~~~~~~~~~~~~L~~~~~--~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~---~~~~~~a~~~~g~--------  149 (377)
                      +++++++.-| +.-++.++  +.-.|++.---..+++-+.+++.|-+.+|==.|.-   --+++.|..++|.        
T Consensus        64 al~~iv~~eY-~~Agi~p~~I~TGAVIITGETArKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~S~~~~  142 (473)
T PF06277_consen   64 ALKEIVEEEY-RKAGITPEDIDTGAVIITGETARKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAALSKEHH  142 (473)
T ss_pred             HHHHHHHHHH-HHcCCCHHHCccccEEEecchhhhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHHhhhhC
Confidence            9999999997 77777765  34444444444456666666766655554211111   1256667777663        


Q ss_pred             ceEEEEeCCCCceEEEEeeCCcccccceEEecccHH-----------HHHHHHHHHHHHcCCCc
Q 017089          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR-----------DLTDALMKILTERGYSF  202 (377)
Q Consensus       150 ~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~-----------~l~~~l~~~l~~~~~~~  202 (377)
                      ...+=+|||+++|.++.+.+|.++  ...-+++||+           .+...++.++.+.+.++
T Consensus       143 ~~V~NiDIGGGTtN~avf~~G~v~--~T~cl~IGGRLi~~d~~g~i~yis~~~~~l~~~~~~~~  204 (473)
T PF06277_consen  143 TVVANIDIGGGTTNIAVFDNGEVI--DTACLDIGGRLIEFDPDGRITYISPPIQRLLEELGLEL  204 (473)
T ss_pred             CeEEEEEeCCCceeEEEEECCEEE--EEEEEeeccEEEEEcCCCcEEEECHHHHHHHHHhCCCC
Confidence            355668999999999999999999  5566899996           33445556666555543

The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.

>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A

Probab=96.18  E-value=0.0039  Score=58.53  Aligned_cols=52  Identities=17%  Similarity=0.286  Sum_probs=42.8

Q ss_pred             hhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhh
Q 017089          295 LYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       295 l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      +-..|+++||.++-+++.+.|++.|....+   ..+|+.+++|++..-+||+++|
T Consensus       381 i~~~VvftGGvA~N~gvv~aLe~~L~~~~~---~~~V~Vp~~pq~~GALGAAL~a  432 (432)
T TIGR02259       381 ITDQFTFTGGVAKNEAAVKELRKLIKENYG---EVQINIDPDSIYTGALGASEFA  432 (432)
T ss_pred             CCCCEEEECCccccHHHHHHHHHHHccccC---CCeEecCCCccHHHHHHHHHhC
Confidence            346799999999999999999999965432   2466678899999999999875

This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).

>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional

Probab=95.88  E-value=0.02  Score=56.78  Aligned_cols=82  Identities=18%  Similarity=0.215  Sum_probs=53.4

Q ss_pred             EEeeCCCCCHHhHHHHHhhccccCCCCeEEeee---ccccccccc-----CCceEEEEeCCCCceEEEEeeCCcccccce
Q 017089          106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAI---QAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALPHAI  177 (377)
Q Consensus       106 vl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~~-----g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~  177 (377)
                      ++.....-...+++.+++.+.+..|++- .+++   ++.++.++.     ...+++|+|||+++|.++.+-+|.+.  ..
T Consensus        81 ~vATsAvReA~N~~~fl~~i~~~tGl~i-evIsG~eEA~l~~~gv~~~l~~~~~~lviDIGGGStEl~~~~~~~~~--~~  157 (496)
T PRK11031         81 VVATATLRLAVNADEFLAKAQEILGCPV-QVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQAT--SL  157 (496)
T ss_pred             EEEeHHHHcCcCHHHHHHHHHHHHCCCe-EEeCHHHHHHHHHHhhhhccCCCCCEEEEEecCCeeeEEEecCCcee--ee
Confidence            3333444456677778877777777652 2222   222222111     12358999999999999999888877  56


Q ss_pred             EEecccHHHHHHH
Q 017089          178 LRLDLAGRDLTDA  190 (377)
Q Consensus       178 ~~~~~GG~~l~~~  190 (377)
                      ..+|+|.-.+++.
T Consensus       158 ~Sl~lG~vrl~e~  170 (496)
T PRK11031        158 FSLSMGCVTWLER  170 (496)
T ss_pred             eEEeccchHHHHH
Confidence            7899998765544

>TIGR03706 exo_poly_only exopolyphosphatase

Probab=95.78  E-value=0.028  Score=52.08  Aligned_cols=83  Identities=17%  Similarity=0.116  Sum_probs=54.8

Q ss_pred             EEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccccc---c----cCCceEEEEeCCCCceEEEEeeCCcccccceE
Q 017089          106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY---A----SGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL  178 (377)
Q Consensus       106 vl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~---~----~g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~  178 (377)
                      ++....+-...+++.+++.+.+..|++ +.++...-=|.|   +    ....+++|+|+|+++|.++.+.+|.+.  ...
T Consensus        75 ~vaTsa~R~A~N~~~~~~~i~~~tgi~-i~visg~eEa~l~~~gv~~~~~~~~~~v~DiGGGSte~~~~~~~~~~--~~~  151 (300)
T TIGR03706        75 AVATAALRDAKNGPEFLREAEAILGLP-IEVISGEEEARLIYLGVAHTLPIADGLVVDIGGGSTELILGKDFEPG--EGV  151 (300)
T ss_pred             EEEcHHHHcCCCHHHHHHHHHHHHCCC-eEEeChHHHHHHHHHHHHhCCCCCCcEEEEecCCeEEEEEecCCCEe--EEE
Confidence            333344445567777887777767754 334443222222   1    122457999999999999999888876  667


Q ss_pred             EecccHHHHHHHH
Q 017089          179 RLDLAGRDLTDAL  191 (377)
Q Consensus       179 ~~~~GG~~l~~~l  191 (377)
                      .+|+|.-.+++.+
T Consensus       152 Sl~lG~vrl~e~f  164 (300)
T TIGR03706       152 SLPLGCVRLTEQF  164 (300)
T ss_pred             EEccceEEhHHhh
Confidence            8999987777665

It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.

>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis

Probab=95.75  E-value=0.0057  Score=55.74  Aligned_cols=48  Identities=25%  Similarity=0.443  Sum_probs=35.3

Q ss_pred             cccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhh
Q 017089          299 IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       299 Iil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      |+++||..+-+.+.+.|++.|.+..+..   .+..+.+|.+.+..||.++|
T Consensus       224 v~l~GGv~~~~~~~~~l~~~l~~~~~~~---~~~~~~~~~~~~a~GAallA  271 (271)
T PF01869_consen  224 VVLSGGVFKNSPLVKALRDALKEKLPKV---PIIIPVEPQYDPAYGAALLA  271 (271)
T ss_dssp             EEEESGGGGCHHHHHHHGGGS-HHHHCC---TCECECCGSSHHHHHHHHHH
T ss_pred             EEEECCccCchHHHHHHHHHHHHhcCCC---ceEECCCCCccHHHHHHHhC
Confidence            9999999998877777766666555442   23344567999999999886

The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.

>PRK13317 pantothenate kinase; Provisional

Probab=95.57  E-value=0.09  Score=47.92  Aligned_cols=71  Identities=21%  Similarity=0.184  Sum_probs=48.8

Q ss_pred             ChHHHHHHHHhcCCHH-HHHHhhcCccccc-CCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017089          275 GIHETTYNSIMKCDVD-IRKDLYGNIVLSG-GSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       275 ~l~~~I~~~i~~~~~~-~~~~l~~nIil~G-G~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +|..+|.+.|..+-.- .|..-.++|+++| |.++.|++.+.|.+.++-.     ..++.-+++|++..-+||++++.
T Consensus       201 sl~~~v~~~I~~lA~~~ar~~~~~~Ivf~G~gla~n~~l~~~l~~~l~~~-----~~~~~~p~~~~~~gAlGAaL~a~  273 (277)
T PRK13317        201 GVIGLVGEVITTLSIQAAREKNIENIVYIGSTLTNNPLLQEIIESYTKLR-----NCTPIFLENGGYSGAIGALLLAT  273 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEECcccccCHHHHHHHHHHHhcC-----CceEEecCCCchhHHHHHHHHhh
Confidence            4444444444433211 1333447999999 7999999999999877421     34666688899999999998875

>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]

Probab=95.52  E-value=0.013  Score=52.17  Aligned_cols=94  Identities=20%  Similarity=0.274  Sum_probs=63.4

Q ss_pred             CHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHH
Q 017089          114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~  188 (377)
                      .+-.-+.+.+.+-++++++.-.---++-+|..+.-.     .---|+|+|+++|+.+.|-....+  ....+.=.|+.++
T Consensus        93 ~~l~M~~iA~~l~~~lgv~V~igGvEAemAi~GALTTPGt~~PlaIlDmG~GSTDAsii~~~g~v--~~iHlAGAG~mVT  170 (332)
T PF08841_consen   93 DKLQMQMIADELEEELGVPVEIGGVEAEMAILGALTTPGTDKPLAILDMGGGSTDASIINRDGEV--TAIHLAGAGNMVT  170 (332)
T ss_dssp             SS-TCHHHHHHHHHHHTSEEEEECEHHHHHHHHHTTSTT--SSEEEEEE-SSEEEEEEE-TTS-E--EEEEEE-SHHHHH
T ss_pred             ccccHHHHHHHHHHHHCCceEEccccHHHHHhcccCCCCCCCCeEEEecCCCcccHHHhCCCCcE--EEEEecCCchhhH
Confidence            334446677777788999888777888888776533     235788999999999888654444  3345566788888


Q ss_pred             HHHHHHHHHcCCCccchhHHHHHHHHHHh
Q 017089          189 DALMKILTERGYSFTTTAEREIVRDMKEK  217 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~  217 (377)
                      -.+..-|   |.     .+.+.+|+||+.
T Consensus       171 mlI~sEL---Gl-----~d~~lAE~IKky  191 (332)
T PF08841_consen  171 MLINSEL---GL-----EDRELAEDIKKY  191 (332)
T ss_dssp             HHHHHHC---T------S-HHHHHHHHHS
T ss_pred             HHHHHhh---CC-----CCHHHHHHhhhc
Confidence            8887666   22     267889999974

This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.

>PRK10854 exopolyphosphatase; Provisional

Probab=94.65  E-value=0.045  Score=54.61  Aligned_cols=81  Identities=12%  Similarity=0.113  Sum_probs=50.9

Q ss_pred             EEeeCCCCCHHhHHHHHhhccccCCCCeEEeee---ccccccccc-----CCceEEEEeCCCCceEEEEeeCCcccccce
Q 017089          106 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAI---QAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALPHAI  177 (377)
Q Consensus       106 vl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~~-----g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~  177 (377)
                      ++....+-...++..+++.+.+..|++- .+++   ++-+..++.     ...+++|||||+++|.++.+-+|.+.  ..
T Consensus        86 ~vATsAlReA~N~~~fl~~i~~~tGl~i-~vIsG~EEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~  162 (513)
T PRK10854         86 IVGTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LV  162 (513)
T ss_pred             EEehHHHHcCcCHHHHHHHHHHHHCCCe-EEeCHHHHHHHHHhhhhcccCCCCCeEEEEeCCCeEEEEEecCCCee--Ee
Confidence            3333444455677778887777777652 2332   222221111     12468999999999999999888765  44


Q ss_pred             EEecccHHHHHH
Q 017089          178 LRLDLAGRDLTD  189 (377)
Q Consensus       178 ~~~~~GG~~l~~  189 (377)
                      ...++|.-.+++
T Consensus       163 ~S~~lG~vrl~e  174 (513)
T PRK10854        163 ESRRMGCVSFAQ  174 (513)
T ss_pred             EEEecceeeHHh
Confidence            556888755555

>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]

Probab=94.21  E-value=0.041  Score=54.11  Aligned_cols=79  Identities=19%  Similarity=0.190  Sum_probs=49.4

Q ss_pred             CCCCHHhHHHHHhhccccCCCCe--EEeeeccccccccc----C-CceEEEEeCCCCceEEEEeeCCcccccceEEeccc
Q 017089          111 PLNPKANREKMTQIMFETFNTPA--MYVAIQAVLSLYAS----G-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA  183 (377)
Q Consensus       111 ~~~~~~~~~~l~~~lfe~~~~~~--v~~~~~~~~a~~~~----g-~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~G  183 (377)
                      .+-...+...+++.+-+.+|++.  +.=-.++-++.++.    + ...++|+|||+++|.++-+-+..+.  ....+|+|
T Consensus        83 A~R~A~N~~eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~~~~~~lv~DIGGGStEl~~g~~~~~~--~~~Sl~~G  160 (492)
T COG0248          83 ALRDAPNGDEFLARVEKELGLPIEVISGEEEARLIYLGVASTLPRKGDGLVIDIGGGSTELVLGDNFEIG--LLISLPLG  160 (492)
T ss_pred             HHHcCCCHHHHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCCCCCCEEEEEecCCeEEEEEecCCccc--eeEEeecc
Confidence            33344555666666666677662  22223333333322    3 5689999999999999988777666  55678888


Q ss_pred             HHHHHHHH
Q 017089          184 GRDLTDAL  191 (377)
Q Consensus       184 G~~l~~~l  191 (377)
                      .-.+++.+
T Consensus       161 ~v~lt~~~  168 (492)
T COG0248         161 CVRLTERF  168 (492)
T ss_pred             eEEeehhh
Confidence            65444443

>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T

Probab=94.00  E-value=0.22  Score=39.18  Aligned_cols=58  Identities=19%  Similarity=0.265  Sum_probs=41.6

Q ss_pred             EEEeCCCCceEEEEeeCCcccccceEEeccc--------HHHHH--HHHHHHHHHcCCCccchhHHHHHHHH-HHhccce
Q 017089          153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA--------GRDLT--DALMKILTERGYSFTTTAEREIVRDM-KEKLAYI  221 (377)
Q Consensus       153 lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~G--------G~~l~--~~l~~~l~~~~~~~~~~~~~~~~~~i-k~~~~~v  221 (377)
                      ++||||++.|.++....+...  ....+++|        +.+++  +.+.+-++.         ..+.+|++ |.++..+
T Consensus         2 ~~iDiGs~~~~~~i~~~~~~~--~~~vl~~g~~~s~gi~~g~Itd~~~i~~~i~~---------a~~~AE~~~k~~i~~v   70 (120)
T PF14450_consen    2 VVIDIGSSKTKVAIAEDGSDG--YIRVLGVGEVPSKGIKGGHITDIEDISKAIKI---------AIEEAERLAKCEIGSV   70 (120)
T ss_dssp             EEEEE-SSSEEEEEEETTEEE--EEEEES----------HHHHH--HHHHHHHT-----------HHHHHHH-HHHH--S
T ss_pred             EEEEcCCCcEEEEEEEeCCCC--cEEEEEEecccccccCCCEEEEHHHHHHHHHH---------HHHHHHHHhCCeeeEE
Confidence            689999999999999888766  56778999        99999  888877732         34668887 7776644

>PRK09557 fructokinase; Reviewed

Probab=93.68  E-value=2.2  Score=39.33  Aligned_cols=52  Identities=13%  Similarity=0.035  Sum_probs=35.6

Q ss_pred             HHhhccccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017089          121 MTQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~  174 (377)
                      +.+.+-+.+++| |.+.++.-|++++.       +..+.+.+.+| ..+-...|.+|+++.
T Consensus        88 l~~~l~~~~~~p-v~~~NDa~aaA~aE~~~g~~~~~~~~~~l~ig-tGiG~giv~~G~l~~  146 (301)
T PRK09557         88 LDKDLSARLNRE-VRLANDANCLAVSEAVDGAAAGKQTVFAVIIG-TGCGAGVAINGRVHI  146 (301)
T ss_pred             HHHHHHHHHCCC-EEEccchhHHHHHHHHhcccCCCCcEEEEEEc-cceEEEEEECCEEEe
Confidence            333444556787 77889888887653       23677788887 446677778888764

>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase)

Probab=93.59  E-value=2  Score=39.91  Aligned_cols=52  Identities=17%  Similarity=0.170  Sum_probs=38.1

Q ss_pred             HHhhccccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017089          121 MTQIMFETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~  174 (377)
                      +.+.+-+.+++| |.+.++.-+++++.       +..+.++|.+|.+. -...|.+|+++.
T Consensus        89 l~~~l~~~~~~p-v~v~NDa~~~alaE~~~g~~~~~~~~~~v~igtGi-G~giv~~G~~~~  147 (318)
T TIGR00744        89 LKEKVEARVGLP-VVVENDANAAALGEYKKGAGKGARDVICITLGTGL-GGGIIINGEIRH  147 (318)
T ss_pred             HHHHHHHHHCCC-EEEechHHHHHHHHHHhcccCCCCcEEEEEeCCcc-EEEEEECCEEee
Confidence            444454667877 77899988887732       45789999999764 777788998764

This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.

>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type

Probab=93.28  E-value=0.88  Score=41.42  Aligned_cols=68  Identities=16%  Similarity=0.024  Sum_probs=44.3

Q ss_pred             ChHHHHHHHHhcCCH-HHHHHhhcCcccccC-CcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhh
Q 017089          275 GIHETTYNSIMKCDV-DIRKDLYGNIVLSGG-STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI  347 (377)
Q Consensus       275 ~l~~~I~~~i~~~~~-~~~~~l~~nIil~GG-~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi  347 (377)
                      +|.++|.+.|..+.. .-+..-.++|+++|| .+..|.+.+++.+.+.-     +..++.-+.+..+..-+||.+
T Consensus       209 SLl~mV~~nIg~lA~~~a~~~~~~~IvF~Gg~L~~~~~l~~~~~~~~~~-----~~~~~ifp~h~~y~gAlGAaL  278 (279)
T TIGR00555       209 SLLGLIGNNIGQIAYLCALRYNIDRIVFIGSFLRNNQLLMKVLSYATNF-----WSKKALFLEHEGYSGAIGALL  278 (279)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCeEEEECCcccCCHHHHHHHHHHHhh-----cCceEEEECCcchHHHhhhcc
Confidence            455555555543321 113444788999999 78899999999877642     235666666677877788764

This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).

>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]

Probab=93.23  E-value=0.87  Score=41.81  Aligned_cols=161  Identities=19%  Similarity=0.218  Sum_probs=83.8

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCC----CCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccC
Q 017089            4 TEDIQPLVCDNGTGMVKAGFAGDDA----PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVS   79 (377)
Q Consensus         4 ~~~~~~vviD~Gs~~~k~G~~~~~~----P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~   79 (377)
                      +++...|.||+|+++|.+=|+--+.    .....|......+           +..+       + ..-+..|+...--.
T Consensus         2 te~ilSVGIDiGTsTTQvifS~lel~Nmas~~~VPri~ii~k-----------di~~-------r-S~i~FTPv~~q~~i   62 (473)
T COG4819           2 TEQILSVGIDIGTSTTQVIFSKLELVNMASVSQVPRIEIIKK-----------DISW-------R-SPIFFTPVDKQGGI   62 (473)
T ss_pred             cceeeeeeeeccCceeeeeeeeeEEeecccccccceEEEEec-----------ceee-------e-cceeeeeecccCCc
Confidence            5677889999999999998874221    1111111111100           0000       0 11234566665556


Q ss_pred             CHHHHHHHHHHhcccccccCCCC--C-cEEEeeCCCCCHHhHHHHHhhccccCCCCeEEee---ecccccccccCC----
Q 017089           80 NWDDMEKIWHHTFYNELRVAPEE--H-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA---IQAVLSLYASGR----  149 (377)
Q Consensus        80 d~~~~~~~~~~~~~~~L~~~~~~--~-~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~---~~~~~a~~~~g~----  149 (377)
                      |.++++.+...=| ..-++.++.  . .++++-...-.+.-|. .+..+-..+|-=.|.-.   -+++.|--+.|.    
T Consensus        63 d~~alk~~v~eeY-~~AGi~pesi~sGAvIITGEtArk~NA~~-vl~alSg~aGDFVVAtAGPdLESiIAGkGaGA~t~S  140 (473)
T COG4819          63 DEAALKKLVLEEY-QAAGIAPESIDSGAVIITGETARKRNARP-VLMALSGSAGDFVVATAGPDLESIIAGKGAGAQTLS  140 (473)
T ss_pred             cHHHHHHHHHHHH-HHcCCChhccccccEEEeccccccccchH-HHHHhhhcccceEEEecCCCHHHHhccCCccccchh
Confidence            7788888876665 556666542  3 3555543332222222 23233222321111111   122223223331    


Q ss_pred             --ceE--EEEeCCCCceEEEEeeCCcccccceEEecccHHHH
Q 017089          150 --TTG--IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL  187 (377)
Q Consensus       150 --~~~--lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l  187 (377)
                        .++  +=+|||+++|..+-+-.|++.  ...-+++||+.+
T Consensus       141 eqr~t~v~NlDIGGGTtN~slFD~Gkv~--dTaCLdiGGRLi  180 (473)
T COG4819         141 EQRLTRVLNLDIGGGTTNYSLFDAGKVS--DTACLDIGGRLI  180 (473)
T ss_pred             hhhceEEEEEeccCCccceeeecccccc--cceeeecCcEEE
Confidence              223  447999999999999889888  334478899744

>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3

Probab=91.52  E-value=0.13  Score=47.37  Aligned_cols=28  Identities=25%  Similarity=0.355  Sum_probs=21.9

Q ss_pred             ccCCceEEEEeCCCCceEEEEeeCCccc
Q 017089          146 ASGRTTGIVLDSGDGVSHTVPIYEGYAL  173 (377)
Q Consensus       146 ~~g~~~~lVVDiG~~~t~i~~v~~g~~~  173 (377)
                      ..+..+++++|||+++|+|++|.||.+.
T Consensus        73 ~~g~~~~i~vDmGGTTtDi~~i~~G~p~  100 (290)
T PF01968_consen   73 LTGLENAIVVDMGGTTTDIALIKDGRPE  100 (290)
T ss_dssp             -HT-SSEEEEEE-SS-EEEEEEETTEE-
T ss_pred             cCCCCCEEEEeCCCCEEEEEEEECCeee
Confidence            4578899999999999999999999986

5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.

>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3

Probab=89.88  E-value=0.49  Score=43.37  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=53.5

Q ss_pred             EeeCCCCCHHhHHHHHhhccccCCCCeEEeee---cccccc----ccc-CCceEEEEeCCCCceEEEEeeCCcccccceE
Q 017089          107 LTEAPLNPKANREKMTQIMFETFNTPAMYVAI---QAVLSL----YAS-GRTTGIVLDSGDGVSHTVPIYEGYALPHAIL  178 (377)
Q Consensus       107 l~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~----~~~-g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~  178 (377)
                      +....+-...++..+++.+.+..|++- .++.   ++.++.    .+. ...+++|+|+|+++|.++.+.+|.+.  ...
T Consensus        62 vATsA~R~A~N~~~~~~~i~~~tGi~i-~iIsgeeEa~l~~~gv~~~l~~~~~~lviDIGGGStEl~~~~~~~~~--~~~  138 (285)
T PF02541_consen   62 VATSALREAKNSDEFLDRIKKETGIDI-EIISGEEEARLSFLGVLSSLPPDKNGLVIDIGGGSTELILFENGKVV--FSQ  138 (285)
T ss_dssp             EEEHHHHHSTTHHHHHHHHHHHHSS-E-EEE-HHHHHHHHHHHHHHHSTTTSSEEEEEEESSEEEEEEEETTEEE--EEE
T ss_pred             EhhHHHHhCcCHHHHHHHHHHHhCCce-EEecHHHHHHHHHHHHHhhccccCCEEEEEECCCceEEEEEECCeee--Eee
Confidence            333444345666777777777777653 2333   222221    122 56789999999999999999999888  667


Q ss_pred             EecccHHHHHHHH
Q 017089          179 RLDLAGRDLTDAL  191 (377)
Q Consensus       179 ~~~~GG~~l~~~l  191 (377)
                      .+|+|.-.+++.+
T Consensus       139 Sl~lG~vrl~e~~  151 (285)
T PF02541_consen  139 SLPLGAVRLTERF  151 (285)
T ss_dssp             EES--HHHHHHHH
T ss_pred             eeehHHHHHHHHH
Confidence            8999987776665

6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.

>COG2441 Predicted butyrate kinase [Energy production and conversion]

Probab=89.74  E-value=0.26  Score=43.96  Aligned_cols=156  Identities=17%  Similarity=0.206  Sum_probs=82.7

Q ss_pred             ceEEEEeCCCCceEEEEeeCCcccccceEEe----cccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhcc------
Q 017089          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRL----DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLA------  219 (377)
Q Consensus       150 ~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~----~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~------  219 (377)
                      -+-+.|.+|...|.++.|.+|+++..-..+.    ..||-.++..+...|...            ++++-+.+-      
T Consensus       163 ~nfIavE~G~aytaavaV~nGkIVDGmgGttgf~gylg~g~MD~ElAYaLa~~------------~~~fsK~~lf~gGa~  230 (374)
T COG2441         163 VNFIAVEIGFAYTAAVAVKNGKIVDGMGGTTGFTGYLGGGAMDGELAYALANY------------LERFSKSLLFEGGAA  230 (374)
T ss_pred             hhhHHHhhhccceeEEEEECCEEEeccCCccCcccccccccccHHHHHHHHHh------------hhhccHhheeccccc
Confidence            4568899999999999999999985433333    556666666666666422            111111111      


Q ss_pred             cee-cCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcC
Q 017089          220 YIA-LDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGN  298 (377)
Q Consensus       220 ~v~-~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~n  298 (377)
                      ++. .+-.++..+........                     |. +         .-+.|.|.+.+...-.+.++.   -
T Consensus       231 ~i~gv~sp~ef~~~ake~enl---------------------e~-~---------~~l~e~vvK~v~tllps~~pd---~  276 (374)
T COG2441         231 YIAGVDSPEEFVKLAKEDENL---------------------ET-Y---------NALIEGVVKDVFTLLPSTYPD---A  276 (374)
T ss_pred             ccccCCCHHHHHHHhhcccch---------------------HH-H---------HHHHHHHHHHHHHhccccCcc---e
Confidence            110 01011111111100000                     00 0         015566666665553333333   3


Q ss_pred             cccccCCcCCcChHHHHHHHHHhhCCCC-c--eEEEECCCCCccccchhhhhhhcc
Q 017089          299 IVLSGGSTMFPGIADRMSKEITALAPSS-M--KIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       299 Iil~GG~s~i~gl~~rl~~eL~~~~~~~-~--~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      |.+.|=.++||-|-.-+++.|+..+... .  .++.....-..-.+-.||+++|+-
T Consensus       277 iylSGrf~~~~~~~~dv~~~l~d~~s~~g~~~evr~le~~~K~KeaA~GaAiiAna  332 (374)
T COG2441         277 IYLSGRFSRIPRFFSDVKEKLRDAFSSYGFGIEVRKLESRAKAKEAAEGAAIIANA  332 (374)
T ss_pred             EEEeeecccccchhhHHHHHHHHHHhhcCccceeehhhhhhhhhhhccchhhhhhh
Confidence            9999999999988777776666544321 1  233333222233467788888874

>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein

Probab=87.77  E-value=0.38  Score=44.59  Aligned_cols=28  Identities=18%  Similarity=0.356  Sum_probs=25.1

Q ss_pred             cCCceEEEEeCCCCceEEEEeeCCcccc
Q 017089          147 SGRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       147 ~g~~~~lVVDiG~~~t~i~~v~~g~~~~  174 (377)
                      ....+++.+|||+++|+|+||.+|.+..
T Consensus       125 ~~~~~~I~~DmGGTTtDi~~i~~G~p~~  152 (318)
T TIGR03123       125 KRIPECLFVDMGSTTTDIIPIIDGEVAA  152 (318)
T ss_pred             hcCCCEEEEEcCccceeeEEecCCEeee
Confidence            3468899999999999999999999873

This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.

>PRK13321 pantothenate kinase; Reviewed

Probab=86.94  E-value=2  Score=38.78  Aligned_cols=19  Identities=32%  Similarity=0.407  Sum_probs=16.4

Q ss_pred             cEEEeCCCCceEEeeeCCC
Q 017089            9 PLVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~   27 (377)
                      .+.||+|.+++|+|+..++
T Consensus         2 iL~IDIGnT~ik~gl~~~~   20 (256)
T PRK13321          2 LLLIDVGNTNIKLGVFDGD   20 (256)
T ss_pred             EEEEEECCCeEEEEEEECC
Confidence            4789999999999998654

>PF03309 Pan_kinase: Type III pantothenate kinase; InterPro: IPR004619 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway

Probab=86.28  E-value=6.2  Score=34.19  Aligned_cols=18  Identities=28%  Similarity=0.348  Sum_probs=15.1

Q ss_pred             EEEeCCCCceEEeeeCCC
Q 017089           10 LVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus        10 vviD~Gs~~~k~G~~~~~   27 (377)
                      ++||+|.+++|+|+..++
T Consensus         2 L~iDiGNT~ik~~~~~~~   19 (206)
T PF03309_consen    2 LLIDIGNTRIKWALFDGD   19 (206)
T ss_dssp             EEEEE-SSEEEEEEEETT
T ss_pred             EEEEECCCeEEEEEEECC
Confidence            789999999999999665

CoA is a ubiquitous and essential cofactor in all living organsims. Pantothenate kinase catalyses the first and rate limiting step in the CoA biosynthetic pathway, which involves transferring a phosphoryl group from ATP to pantothenate, also known as vitamin B5. Three distinct types of pantothenate kinase enzymes have been identified: type I PanK enzymes are typified by the E. coli CoaA protein, type II enzymes are primarily found in eukaryotic organisms whilst type III enzymes have a wider phylogenic distribution and are not feedback inhibited by CoA []. This entry represents the type III pantothenate kinase family, such as that found in Helicobacter pylori. PanK III enzymes have a much wider phylogenic distribution than PanK I, and differs significantly in biochemical activity. PanK III enzymes are are not feedback inhibited by CoA concentration (which is also the case for PanK II enzymes), and PanK III enzymes have an unusually high Km for ATP []. ; GO: 0045893 positive regulation of transcription, DNA-dependent; PDB: 2GTD_E 3BF1_F 3BEX_D 3BF3_F 2NRH_B 2H3G_X 3DJC_J 2F9T_A 2F9W_A.

>PRK13324 pantothenate kinase; Reviewed

Probab=85.90  E-value=8.6  Score=34.68  Aligned_cols=18  Identities=28%  Similarity=0.379  Sum_probs=15.7

Q ss_pred             cEEEeCCCCceEEeeeCC
Q 017089            9 PLVCDNGTGMVKAGFAGD   26 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~   26 (377)
                      .+.||+|.+++|.|+..+
T Consensus         2 iL~iDiGNT~ik~gl~~~   19 (258)
T PRK13324          2 LLVMDMGNSHIHIGVFDG   19 (258)
T ss_pred             EEEEEeCCCceEEEEEEC
Confidence            478999999999998854

>COG1521 Pantothenate kinase type III (Bvg accessory factor family protein) [Transcription]

Probab=85.33  E-value=10  Score=33.94  Aligned_cols=18  Identities=17%  Similarity=0.137  Sum_probs=15.7

Q ss_pred             cEEEeCCCCceEEeeeCC
Q 017089            9 PLVCDNGTGMVKAGFAGD   26 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~   26 (377)
                      -++||+|.++++.|...+
T Consensus         2 ~L~iDiGNT~~~~a~~~~   19 (251)
T COG1521           2 LLLIDIGNTRIVFALYEG   19 (251)
T ss_pred             eEEEEeCCCeEEEEEecC
Confidence            479999999999998863

>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]

Probab=84.59  E-value=0.67  Score=41.01  Aligned_cols=24  Identities=29%  Similarity=0.584  Sum_probs=21.7

Q ss_pred             CceEEEEeCCCCceEEEEeeCCcc
Q 017089          149 RTTGIVLDSGDGVSHTVPIYEGYA  172 (377)
Q Consensus       149 ~~~~lVVDiG~~~t~i~~v~~g~~  172 (377)
                      ..+|+.||+|+++|+|+||.+|..
T Consensus       129 ~dsci~VD~GSTTtDIIPi~~ge~  152 (330)
T COG1548         129 KDSCILVDMGSTTTDIIPIKDGEA  152 (330)
T ss_pred             CCceEEEecCCcccceEeecchhh
Confidence            367999999999999999999973

>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length

Probab=84.46  E-value=2.5  Score=39.37  Aligned_cols=50  Identities=22%  Similarity=0.359  Sum_probs=37.3

Q ss_pred             CcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCC---CCccccchhhhhhhcc
Q 017089          298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASL  351 (377)
Q Consensus       298 nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~---~~~~~~w~Gasi~a~l  351 (377)
                      -|+|+|-.+.+|.|.+.+.+.|...++    +++....   -..-.+-.|++++|+-
T Consensus       263 ~IilSGr~~~~~~~~~~l~~~l~~~~~----~~v~~l~~~~~~aKeaA~GaAiIA~g  315 (343)
T PF07318_consen  263 EIILSGRFSRIPEFRKKLEDRLEDYFP----VKVRKLEGLARKAKEAAQGAAIIANG  315 (343)
T ss_pred             EEEEeccccccHHHHHHHHHHHHhhcc----cceeecccccccchhhhhhHHHHhhh
Confidence            399999999999999999999998876    2332221   1123478899999873

The function of this family is unknown.

>PRK13329 pantothenate kinase; Reviewed

Probab=80.38  E-value=14  Score=33.20  Aligned_cols=17  Identities=29%  Similarity=0.274  Sum_probs=15.7

Q ss_pred             cEEEeCCCCceEEeeeC
Q 017089            9 PLVCDNGTGMVKAGFAG   25 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~   25 (377)
                      .++||+|.+.+|.++..
T Consensus         3 ~LliD~GNTriKw~~~~   19 (249)
T PRK13329          3 FLAIDVGNTRLKWGLYD   19 (249)
T ss_pred             EEEEEcCcchheeeEec
Confidence            89999999999999875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	377
1nlv_A	375	Crystal Structure Of Dictyostelium Discoideum Actin		0.0
3chw_A	375	Complex Of Dictyostelium Discoideum Actin With Prof		0.0
3ci5_A	375	Complex Of Phosphorylated Dictyostelium Discoideum		0.0
1dej_A	375	Crystal Structure Of A DictyosteliumTETRAHYMENA CHI		0.0
4efh_A	375	Acanthamoeba Actin Complex With Spir Domain D Lengt		0.0
1c0g_A	375	Crystal Structure Of 1:1 Complex Between Gelsolin S		0.0
3a5l_C	375	Crystal Structure Of A Dictyostelium P109a Mg2+-Act		0.0
3a5m_C	375	Crystal Structure Of A Dictyostelium P109i Mg2+-Act		0.0
3u4l_A	375	Cryocooled Bovine Profilin:actin Crystal Structure		0.0
3byh_A	374	Model Of Actin-Fimbrin Abd2 Complex Length = 374		0.0
2oan_A	375	Structure Of Oxidized Beta-Actin Length = 375		0.0
2hf3_A	374	Crystal Structure Of Monomeric Actin In The Adp Bou		0.0
3eks_A	375	Crystal Structure Of Monomeric Actin Bound To Cytoc		0.0
1d4x_A	375	Crystal Structure Of Caenorhabditis Elegans Mg-Atp		0.0
2btf_A	375	The Structure Of Crystalline Profilin-Beta-Actin Le		0.0
1ijj_A	377	The X-Ray Crystal Structure Of The Complex Between		0.0
1kxp_A	375	Crystal Structure Of Human Vitamin D-binding Protei		0.0
4b1v_A	376	Structure Of The Phactr1 Rpel-N Domain Bound To G-A		0.0
1eqy_A	377	Complex Between Rabbit Muscle Alpha-Actin: Human Ge		0.0
1t44_A	370	Structural Basis Of Actin Sequestration By Thymosin		0.0
1c0f_A	368	Crystal Structure Of Dictyostelium Caatp-Actin In C		0.0
3g37_O	376	Cryo-Em Structure Of Actin Filament In The Presence		0.0
1qz5_A	375	Structure Of Rabbit Actin In Complex With Kabiramid		0.0
3w3d_A	374	Crystal Structure Of Smooth Muscle G Actin Dnase I		0.0
2gwj_A	371	Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form		0.0
1lcu_A	371	Polylysine Induces An Antiparallel Actin Dimer That		0.0
2w49_D	372	Isometrically Contracting Insect Asynchronous Fligh		0.0
3b63_L	365	Actin Filament Model In The Extended Form Of Acroms		0.0
3m6g_A	371	Crystal Structure Of Actin In Complex With Lobophor		0.0
1atn_A	373	Atomic Structure Of The Actin:dnase I Complex Lengt		0.0
3b63_E	365	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_B	364	Actin Filament Model In The Extended Form Of Acroms		0.0
1yag_A	375	Structure Of The Yeast Actin-human Gelsolin Segment		0.0
1yvn_A	375	The Yeast Actin Val 159 Asn Mutant Complex With Hum		0.0
3b63_D	357	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_C	365	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_F	357	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_A	365	Actin Filament Model In The Extended Form Of Acroms		0.0
3mn5_A	359	Structures Of Actin-Bound Wh2 Domains Of Spire And		0.0
2p9k_B	394	Crystal Structure Of Bovine Arp23 COMPLEX CO-Crysta		1e-103
1k8k_B	394	Crystal Structure Of Arp23 COMPLEX Length = 394		1e-103
1k8k_A	418	Crystal Structure Of Arp23 COMPLEX Length = 418		9e-62
3dwl_A	427	Crystal Structure Of Fission Yeast Arp2/3 Complex L		1e-60
3qb0_A	498	Crystal Structure Of Actin-Related Protein Arp4 Fro		3e-20
4i6m_A	477	Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex		9e-14
4fo0_A	593	Human Actin-Related Protein Arp8 In Its Atp-Bound S		6e-07
4i6m_B	439	Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex		8e-06

>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin Complexed With Ca Atp And Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/375 (91%), Positives = 364/375 (97%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+EQE+ TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin And The Last Poly-Pro Of Human Vasp Length = 375

Iteration: 1
 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/375 (90%), Positives = 363/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 375

Iteration: 1
 Score =  724 bits (1870), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/375 (90%), Positives = 362/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+ VGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSXVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/375 (90%), Positives = 361/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++  K SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYKESSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKH 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D Length = 375

Iteration: 1
 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/373 (90%), Positives = 360/373 (96%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +++Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DEVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SSA+EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSSALEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFR PE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLSGG
Sbjct: 243 PDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TMFPGIADRM KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment 1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228kT229AA230YE360H) Length = 375

Iteration: 1
 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/375 (90%), Positives = 361/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++   +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKH 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/375 (89%), Positives = 359/375 (95%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAALNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTA   IVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/375 (89%), Positives = 359/375 (95%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAILNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTA   IVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4 A Length = 375

Iteration: 1
 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/373 (89%), Positives = 356/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex Length = 374

Iteration: 1
 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/373 (89%), Positives = 356/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 2   DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 61
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 62  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 121
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 122 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 181
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 182 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 241
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG
Sbjct: 242 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGG 301
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 302 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 361
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 362 DESGPSIVHRKCF 374

>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin Length = 375

Iteration: 1
 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/373 (89%), Positives = 356/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESXGIHETTFNSIMKCDVDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound State Length = 374

Iteration: 1
 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/373 (89%), Positives = 354/373 (94%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 2   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 61
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 62  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 121
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 122 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 181
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTT EREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 182 RDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 241
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
            DGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 242 KDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 301
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 302 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 361
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 362 DESGPSIVHRKCF 374

>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin D Length = 375

Iteration: 1
 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/373 (89%), Positives = 354/373 (94%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTT EREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
            DGQVITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 243 KDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 375

Iteration: 1
 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/373 (88%), Positives = 357/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVIT+G ERFRCPE +FQPS +GME+AGIHET+YNSIMKCD+DIRKDLY N VLSGG
Sbjct: 243 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin Length = 375

Iteration: 1
 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/373 (89%), Positives = 355/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit Skeletal Muscle Actin And Latrunculin A At 2.85 A Resolution Length = 377

Iteration: 1
 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/377 (87%), Positives = 354/377 (93%)
Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA
Sbjct: 1   MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60
Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180
Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V
Sbjct: 241 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300
Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           +SGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI 
Sbjct: 301 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT 360
Query: 361 KAEYDESGPSIVHRKCF 377
           K EYDE+GPSIVHRKCF
Sbjct: 361 KQEYDEAGPSIVHRKCF 377

>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In Complex With Skeletal Actin Length = 375

Iteration: 1
 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/375 (87%), Positives = 353/375 (94%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 361 EYDEAGPSIVHRKCF 375

>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin Length = 376

Iteration: 1
 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/376 (87%), Positives = 353/376 (93%)
Query: 2   ADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
            D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1   CDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 62  SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
           SKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKM 120
Query: 122 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 181
           TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 180
Query: 182 LAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS 241
           LAGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 240
Query: 242 YELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
           YELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+
Sbjct: 241 YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVM 300
Query: 302 SGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK 361
           SGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITK 360
Query: 362 AEYDESGPSIVHRKCF 377
            EYDE+GPSIVHRKCF
Sbjct: 361 QEYDEAGPSIVHRKCF 376

>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 377

Iteration: 1
 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/377 (87%), Positives = 353/377 (93%)
Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA
Sbjct: 1   MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60
Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
           QSKRGILTLKYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180
Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V
Sbjct: 241 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300
Query: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           +SGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI 
Sbjct: 301 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT 360
Query: 361 KAEYDESGPSIVHRKCF 377
           K EYDE+GPSIVHRKCF
Sbjct: 361 KQEYDEAGPSIVHRKCF 377

>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 370

Iteration: 1
 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/368 (88%), Positives = 350/368 (95%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 63  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 122
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 123 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 183 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 243 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 302
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 303 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 362
Query: 370 SIVHRKCF 377
           SIVHRKCF
Sbjct: 363 SIVHRKCF 370

>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 368

Iteration: 1
 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/375 (88%), Positives = 356/375 (94%), Gaps = 7/375 (1%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTG       KD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTG-------KDSYVGDEAQS 53
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 54  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 113
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 114 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 173
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 174 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 233
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 234 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 293
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 294 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 353
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 354 EYDESGPSIVHRKCF 368

>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of Phosphate Length = 376

Iteration: 1
 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/375 (87%), Positives = 352/375 (93%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 2   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 62  KRGILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 121
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 181
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 241
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 242 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 301
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 361
Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 362 EYDEAGPSIVHRKCF 376

>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C Length = 375

Iteration: 1
 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/375 (87%), Positives = 352/375 (93%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 361 EYDEAGPSIVHRKCF 375

>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex Length = 374

Iteration: 1
 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/373 (87%), Positives = 351/373 (94%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           E+   LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 2   EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 61
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
           GILTLKYPIE GI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQI
Sbjct: 62  GILTLKYPIEXGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQI 121
Query: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAG
Sbjct: 122 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAG 181
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYEL
Sbjct: 182 RDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYEL 241
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG
Sbjct: 242 PDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGG 301
Query: 305 STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           +TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 302 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 361
Query: 365 DESGPSIVHRKCF 377
           DE+GPSIVHRKCF
Sbjct: 362 DEAGPSIVHRKCF 374

>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form Length = 371

Iteration: 1
 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/368 (88%), Positives = 349/368 (94%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 4   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 63
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 64  KYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 123
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 124 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 183
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 184 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 243
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 244 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 303
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 304 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 363
Query: 370 SIVHRKCF 377
           SIVHRKCF
Sbjct: 364 SIVHRKCF 371

>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That Nucleates Filament Assembly: Crystal Structure At 3.5 A Resolution Length = 371

Iteration: 1
 Score =  700 bits (1807), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/368 (88%), Positives = 348/368 (94%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMV MGQ D+YVGDEAQSKRGILTL
Sbjct: 4   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQGDSYVGDEAQSKRGILTL 63
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 64  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 123
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 124 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 183
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 184 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 243
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 244 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 303
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 304 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 363
Query: 370 SIVHRKCF 377
           SIVHRKCF
Sbjct: 364 SIVHRKCF 371

>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 372

Iteration: 1
 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/372 (87%), Positives = 350/372 (94%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360
Query: 363 EYDESGPSIVHR 374
           EYDE+GPSIVHR
Sbjct: 361 EYDEAGPSIVHR 372

>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/363 (90%), Positives = 348/363 (95%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF
Sbjct: 63  KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 122
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           NTPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 123 NTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYELPDGQV
Sbjct: 183 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS +GME+ GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+P
Sbjct: 243 ITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYP 302
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP
Sbjct: 303 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 362
Query: 370 SIV 372
           SIV
Sbjct: 363 SIV 365

>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide Length = 371

Iteration: 1
 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/371 (87%), Positives = 349/371 (94%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360
Query: 363 EYDESGPSIVH 373
           EYDE+GPSIVH
Sbjct: 361 EYDEAGPSIVH 371

>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex Length = 373

Iteration: 1
 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/372 (87%), Positives = 349/372 (93%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 2   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 62  KRGILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 121
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 181
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 241
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 242 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 301
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 361
Query: 363 EYDESGPSIVHR 374
           EYDE+GPSIVHR
Sbjct: 362 EYDEAGPSIVHR 373

>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/363 (88%), Positives = 345/363 (95%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 63  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 122
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 123 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 183 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 243 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 302
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 303 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 362
Query: 370 SIV 372
           SIV
Sbjct: 363 SIV 365

>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 364

Iteration: 1
 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/363 (88%), Positives = 344/363 (94%), Gaps = 1/363 (0%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 63  KYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 121
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 122 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 181
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 182 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 241
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 242 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 301
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 302 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 361
Query: 370 SIV 372
           SIV
Sbjct: 362 SIV 364

>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 375

Iteration: 1
 Score =  684 bits (1765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/372 (83%), Positives = 351/372 (94%)
Query: 6   DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65
           ++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKD+YVGDEAQSKRG
Sbjct: 4   EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 63
Query: 66  ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 125
           ILTL+YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPK+NREKMTQIM
Sbjct: 64  ILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIM 123
Query: 126 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 185
           FETFN PA YV+IQAVLSLY+SGRTTGIVLDSGDGV+H VPIY G++LPHAILR+DLAGR
Sbjct: 124 FETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGR 183
Query: 186 DLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP 245
           DLTD LMKIL+ERGYSF+TTAEREIVRD+KEKL Y+ALD+EQE++TA  SS++EKSYELP
Sbjct: 184 DLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELP 243
Query: 246 DGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGS 305
           DGQVITIG ERFR PE LF PS++G+E+AGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+
Sbjct: 244 DGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGT 303
Query: 306 TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYD 365
           TMFPGIA+RM KEITALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWI+K EYD
Sbjct: 304 TMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYD 363
Query: 366 ESGPSIVHRKCF 377
           ESGPSIVH KCF
Sbjct: 364 ESGPSIVHHKCF 375

>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/372 (83%), Positives = 350/372 (94%)
Query: 6   DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65
           ++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKD+YVGDEAQSKRG
Sbjct: 4   EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 63
Query: 66  ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 125
           ILTL+YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPK+NREKMTQIM
Sbjct: 64  ILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIM 123
Query: 126 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 185
           FETFN PA YV+IQAVLSLY+SGRTTGIVLDSGDG +H VPIY G++LPHAILR+DLAGR
Sbjct: 124 FETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGR 183
Query: 186 DLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP 245
           DLTD LMKIL+ERGYSF+TTAEREIVRD+KEKL Y+ALD+EQE++TA  SS++EKSYELP
Sbjct: 184 DLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELP 243
Query: 246 DGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGS 305
           DGQVITIG ERFR PE LF PS++G+E+AGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+
Sbjct: 244 DGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGT 303
Query: 306 TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYD 365
           TMFPGIA+RM KEITALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWI+K EYD
Sbjct: 304 TMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYD 363
Query: 366 ESGPSIVHRKCF 377
           ESGPSIVH KCF
Sbjct: 364 ESGPSIVHHKCF 375

>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357

Iteration: 1
 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/357 (88%), Positives = 338/357 (94%), Gaps = 1/357 (0%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 2   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 61
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 62  KYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 120
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 121 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 180
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 181 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 240
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 241 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 300
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
           GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE
Sbjct: 301 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDE 357

>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/363 (84%), Positives = 345/363 (95%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           +YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPK+NREKMTQIMFETF
Sbjct: 63  RYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETF 122
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PA YV+IQAVLSLY+SGRTTGIVLDSGDGV+H VPIY G++LPHAILR+DLAGRDLTD
Sbjct: 123 NVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKIL+ERGYSF+TTAEREIVRD+KEKL Y+ALD+EQE++TA  SS++EKSYELPDGQV
Sbjct: 183 YLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFR PE LF PS++G+E+AGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+TMFP
Sbjct: 243 ITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFP 302
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIA+RM KEITALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWI+K EYDESGP
Sbjct: 303 GIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGP 362
Query: 370 SIV 372
           SIV
Sbjct: 363 SIV 365

>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357

Iteration: 1
 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/355 (88%), Positives = 336/355 (94%), Gaps = 1/355 (0%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 4   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 63
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 64  KYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 122
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 123 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 183 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 243 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 302
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY 364
           GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EY
Sbjct: 303 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEY 357

>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/363 (84%), Positives = 344/363 (94%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           +YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPK+NREKMTQIMFETF
Sbjct: 63  RYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETF 122
Query: 130 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PA YV+IQAVLSLY+SGRTTGIVLDSGDG +H VPIY G++LPHAILR+DLAGRDLTD
Sbjct: 123 NVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKIL+ERGYSF+TTAEREIVRD+KEKL Y+ALD+EQE++TA  SS++EKSYELPDGQV
Sbjct: 183 YLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFR PE LF PS++G+E+AGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+TMFP
Sbjct: 243 ITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFP 302
Query: 310 GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP 369
           GIA+RM KEITALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWI+K EYDESGP
Sbjct: 303 GIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGP 362
Query: 370 SIV 372
           SIV
Sbjct: 363 SIV 365

>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The Implication For Filament Nucleation Length = 359

Iteration: 1
 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/375 (83%), Positives = 338/375 (90%), Gaps = 16/375 (4%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGR                VGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGR----------------VGDEAQS 44
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 45  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 104
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 105 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 164
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 165 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 224
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 225 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 284
Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 285 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 344
Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 345 EYDEAGPSIVHRKCF 359

>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized With Atp And Crosslinked With Glutaraldehyde Length = 394

Iteration: 1
 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/387 (45%), Positives = 255/387 (65%), Gaps = 15/387 (3%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
           D++  + +VCDNGTG VK G+AG + P  +FPS+VGRP  R T  +  +  KD  VGDEA
Sbjct: 2   DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPSLVGRPIIRSTTKVGNIEIKDLMVGDEA 61
Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 119
              R +L + YP+E+GIV NWDDM+ +W +TF  E L +      +LLTE P+NP  NRE
Sbjct: 62  SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNRE 121
Query: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
           K+ ++MFET+    +YVAIQAVL+LYA G  TG+V+DSGDGV+H  P+YEG++LPH   R
Sbjct: 122 KIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRR 181
Query: 180 LDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 239
           LD+AGRD+T  L+K+L  RGY+F  +A+ E VR +KEKL Y+  + EQE + A  ++ + 
Sbjct: 182 LDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241
Query: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299
           +SY LPDG++I +G ERF  PE LFQP +I +E  G+ E  +N+I   D+D R + Y +I
Sbjct: 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 300 VLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSIL 348
           VLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++L
Sbjct: 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVL 361
Query: 349 ASLSTFQ-QMWIAKAEYDESGPSIVHR 374
           A +   +   W+ + EY E G  ++ +
Sbjct: 362 ADIMKDKDNFWMTRQEYQEKGVRVLEK 388

>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX Length = 394

Iteration: 1
 Score =  370 bits (951), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/387 (45%), Positives = 255/387 (65%), Gaps = 15/387 (3%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
           D++  + +VCDNGTG VK G+AG + P  +FP++VGRP  R T  +  +  KD  VGDEA
Sbjct: 2   DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEA 61
Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 119
              R +L + YP+E+GIV NWDDM+ +W +TF  E L +      +LLTE P+NP  NRE
Sbjct: 62  SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNRE 121
Query: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
           K+ ++MFET+    +YVAIQAVL+LYA G  TG+V+DSGDGV+H  P+YEG++LPH   R
Sbjct: 122 KIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRR 181
Query: 180 LDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 239
           LD+AGRD+T  L+K+L  RGY+F  +A+ E VR +KEKL Y+  + EQE + A  ++ + 
Sbjct: 182 LDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241
Query: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299
           +SY LPDG++I +G ERF  PE LFQP +I +E  G+ E  +N+I   D+D R + Y +I
Sbjct: 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 300 VLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSIL 348
           VLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++L
Sbjct: 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVL 361
Query: 349 ASLSTFQ-QMWIAKAEYDESGPSIVHR 374
           A +   +   W+ + EY E G  ++ +
Sbjct: 362 ADIMKDKDNFWMTRQEYQEKGVRVLEK 388

>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418

Iteration: 1
 Score =  234 bits (596), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 150/407 (36%), Positives = 209/407 (51%), Gaps = 41/407 (10%)
Query: 11  VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
           V D GTG  K G+AG+  P+ + PS         VG      VM G+   D ++GDEA  
Sbjct: 9   VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIE 68
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           K    T K+PI HGIV +WD ME+      +  LR  PE+H  LLTE PLN   NRE   
Sbjct: 69  KPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTA 127
Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALP 174
           +IMFE+FN P +Y+A+QAVL+L AS  +        TG V+DSGDGV+H +P+ EGY + 
Sbjct: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIG 187
Query: 175 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKT 234
             I  + +AGRD+T  + ++L +R          E  + +KE+ +Y+  D  +E     T
Sbjct: 188 SCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDT 247
Query: 235 S-SAVEKSYELPDG-----QVITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKC 287
             S   K Y   +        I +G ERF  PE+ F P     +    I E     I  C
Sbjct: 248 DGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNC 307
Query: 288 DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT----------------ALAPSSMKIKV 331
            +D+R+ LY NIVLSGGSTMF     R+ +++                  L P  + ++V
Sbjct: 308 PIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQV 367
Query: 332 VAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIV-HRKCF 377
           +    ++Y+VW GGS+LAS   F Q+   K +Y+E GPSI  H   F
Sbjct: 368 ITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVF 414

>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427

Iteration: 1
 Score =  229 bits (585), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 215/419 (51%), Gaps = 59/419 (14%)
Query: 9   PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------MGQK------- 52
           P++ DNGTG  K G+AG+DAP  VFP+++   R  G   G         M  K       
Sbjct: 7   PIIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSS 65
Query: 53  -------DAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
                  D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR  PE+H 
Sbjct: 66  KRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHY 125
Query: 105 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLD 156
            LLTE PLNP  NRE   +IMFE+FN   +Y+A+QAVL+L AS  +        TG V+D
Sbjct: 126 FLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVD 185
Query: 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY--SFTTTAEREIVRDM 214
           SGDGV+H +P+ EGY +  +I  + LAGRD+T  +  +L +R    S   TAER     +
Sbjct: 186 SGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----I 240
Query: 215 KEKLAYIALDYEQELET--AKTSSAVEKSYELPDGQVITI--GAERFRCPEVLFQPSMIG 270
           KE+  Y+  D  +E      +    ++ + E   G   TI  G ERF  PE+ F P +  
Sbjct: 241 KEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIAS 300
Query: 271 ME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKE----------- 318
            +    + E   N +    +D+RK LY NIVLSGGST+F    +R+ ++           
Sbjct: 301 SDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHR 360
Query: 319 ---ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374
              ++      + + V++   ++ +VW GGS+LA    F      KA+Y+E G SI  R
Sbjct: 361 SEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARR 419

>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S. Cerevisiae Complexed With Atp Length = 498

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 265 QPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAP 324
           +P     E  G+ +  Y+SIM  DVD+R  L  N+VL+GG++  PG++DR+  E+  + P
Sbjct: 383 KPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP 442
Query: 325 SSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIAKAEYDESG 368
            S+K +++      ER+Y  W+GGSIL SL TF Q+W+ K EY+E G
Sbjct: 443 -SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVG 488

>pdb|4I6M|A Chain A, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of Swi/snf Chromatin Remodeler Length = 477

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILT 68
           +V  NG+    AGF+  + P+ + PS  + R    G    +      +   A+ + G   
Sbjct: 8   VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNXIDAAAEKRNGDEV 67
Query: 69  LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR---EKMTQIM 125
                  G+  NWD +E  W + +  +L+V+PEE P+++T    N K +    E+  ++ 
Sbjct: 68  YTLVDSQGLPYNWDALEXQWRYLYDTQLKVSPEELPLVITXPATNGKPDXAILERYYELA 127
Query: 126 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           F+  N P   + I+ +    + G+++  V+D G    +  PI +G  + +A++R    G
Sbjct: 128 FDKLNVPVFQIVIEPLAIALSXGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGG 186

>pdb|4FO0|A Chain A, Human Actin-Related Protein Arp8 In Its Atp-Bound State Length = 593

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 263 LFQPSMIGMEAAGIHETTYNSIMKCDVD-IRKDLYGNIVLSGGSTMFPGIADRMSKEITA 321
           LF+   +G++ A +H     SI  C  D  +K +Y +I++ GG  MF    + +   I  
Sbjct: 472 LFEGKALGLDKAILH-----SIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILN 526
Query: 322 LAPSSMK-----IKVVAPPER---KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVH 373
             P S +     + V+  P+    +   W GG++LA L T Q++WI + E+   G  ++ 
Sbjct: 527 KMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLR 586
Query: 374 RK 375
            +
Sbjct: 587 ER 588

>pdb|4I6M|B Chain B, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of Swi/snf Chromatin Remodeler Length = 439

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 104 PVLLTEAPLNPKANREKMTQIMFETF------NTPAMYVAIQAVLSLYASGRTTGIVLDS 157
           P+LL       +++ E +TQ +FE+         PA   A  + +SL         ++D 
Sbjct: 110 PLLLITHHSWSQSDLEIITQYVFESLEINNLIQLPASLAATYSXISL-----QNCCIIDV 164
Query: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL----TERGYSFTTTAEREIVRD 213
           G   +  +PI +   L H +  +   G+ + D+L K+L     ++  S   +   E++ D
Sbjct: 165 GTHHTDIIPIVDYAQLDHLVSSIPXGGQSINDSLKKLLPQWDDDQIESLKKSPIFEVLSD 224
Query: 214 MKEKLAYIALDYEQELE---TAKTSSAVEKSYELPDGQVITIGAERFR-CPEVLFQPS-M 268
             +KL+      E E E   T K S     ++    G  I +G +RF+ C  ++   S  
Sbjct: 225 DAKKLSSFDFGNENEDEDEGTLKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKNISNR 284
Query: 269 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM 315
           +G+    I           D++  K ++ NI++ GG+T   G  + +
Sbjct: 285 VGLTLDNID----------DINKAKAVWENIIIVGGTTSISGFKEAL 321

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	377
2fxu_A	375	Alpha-actin-1, actin, alpha skeletal muscle; actin	0.0
1k8k_B	394	ARP2, actin-like protein 2; beta-propeller, struct	0.0
1k8k_A	418	ARP3, actin-like protein 3, actin-2; beta-propelle	0.0
3dwl_A	427	Actin-related protein 3; propellor, actin-binding,	0.0
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	1e-160
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	2e-89
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375

 Score =  761 bits (1968), Expect = 0.0
 Identities = 328/375 (87%), Positives = 353/375 (94%)

Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120

Query: 123 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180

Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240

Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300

Query: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
           GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360

Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 361 EYDEAGPSIVHRKCF 375

>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394

 Score =  729 bits (1884), Expect = 0.0
 Identities = 176/389 (45%), Positives = 253/389 (65%), Gaps = 15/389 (3%)

Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR--HTGVMVGMGQKDAYVGDEA 60
           D++  + +VCDNGTG VK G+AG + P  +FP++VGRP    T  +  +  KD  VGDEA
Sbjct: 2   DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEA 61

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 119
              R +L + YP+E+GIV NWDDM+ +W +TF  E L +      +LLTE P+NP  NRE
Sbjct: 62  SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNRE 121

Query: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
           K+ ++MFET+    +YVAIQAVL+LYA G  TG+V+DSGDGV+H  P+YEG++LPH   R
Sbjct: 122 KIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRR 181

Query: 180 LDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 239
           LD+AGRD+T  L+K+L  RGY+F  +A+ E VR +KEKL Y+  + EQE + A  ++ + 
Sbjct: 182 LDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241

Query: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNI 299
           +SY LPDG++I +G ERF  PE LFQP +I +E  G+ E  +N+I   D+D R + Y +I
Sbjct: 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301

Query: 300 VLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSIL 348
           VLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++L
Sbjct: 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVL 361

Query: 349 ASLST-FQQMWIAKAEYDESGPSIVHRKC 376
           A +       W+ + EY E G  ++ +  
Sbjct: 362 ADIMKDKDNFWMTRQEYQEKGVRVLEKLG 390

>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418

 Score =  726 bits (1876), Expect = 0.0
 Identities = 148/417 (35%), Positives = 209/417 (50%), Gaps = 43/417 (10%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGR--------PRHTGVMVGMGQK 52
           MA    +   V D GTG  K G+AG+  P+ + PS +               VM G+   
Sbjct: 1   MAG--RLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDL 58

Query: 53  DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
           D ++GDEA  K      K+PI HGIV +WD ME+      +  LR  PE+H  LLTE PL
Sbjct: 59  DFFIGDEAIEKPT-YATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPL 117

Query: 113 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHT 164
           N   NRE   +IMFE+FN P +Y+A+QAVL+L AS  +        TG V+DSGDGV+H 
Sbjct: 118 NTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHV 177

Query: 165 VPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALD 224
           +P+ EGY +   I  + +AGRD+T  + ++L +R          E  + +KE+ +Y+  D
Sbjct: 178 IPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD 237

Query: 225 YEQELETAKT-SSAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSMIGME-AAGIH 277
             +E     T  S   K Y   +        I +G ERF  PE+ F P     +    I 
Sbjct: 238 LVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPIS 297

Query: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT----------------A 321
           E     I  C +D+R+ LY NIVLSGGSTMF     R+ +++                  
Sbjct: 298 EVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGR 357

Query: 322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRK-CF 377
           L P  + ++V+    ++Y+VW GGS+LAS   F Q+   K +Y+E GPSI      F
Sbjct: 358 LKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVF 414

>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427

 Score =  680 bits (1756), Expect = 0.0
 Identities = 138/426 (32%), Positives = 205/426 (48%), Gaps = 55/426 (12%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR------------------- 41
           MA      P++ DNGTG  K G+AG+DAP  VFP+++                       
Sbjct: 1   MAS--FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASK 58

Query: 42  ---HTGVMVGMGQKDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
              H          D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR
Sbjct: 59  GSGHLSSKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLR 118

Query: 98  VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT------- 150
             PE+H  LLTE PLNP  NRE   +IMFE+FN   +Y+A+QAVL+L AS  +       
Sbjct: 119 CEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRS 178

Query: 151 -TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAERE 209
            TG V+DSGDGV+H +P+ EGY +  +I  + LAGRD+T  +  +L +R    ++    +
Sbjct: 179 LTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSS---LK 235

Query: 210 IVRDMKEKLAYIALDYEQELETAKTSSAVEKS----YELPDGQVITIGAERFRCPEVLFQ 265
               +KE+  Y+  D  +E                         I +G ERF  PE+ F 
Sbjct: 236 TAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFN 295

Query: 266 PSMIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAP 324
           P +   +    + E   N +    +D+RK LY NIVLSGGST+F    +R+ +++  +  
Sbjct: 296 PEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVD 355

Query: 325 SSM--------------KIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPS 370
             +               + V++   ++ +VW GGS+LA    F      KA+Y+E G S
Sbjct: 356 ERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGAS 415

Query: 371 IVHRKC 376
           I  R  
Sbjct: 416 IARRYQ 421

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498

 Score =  457 bits (1178), Expect = e-160
 Identities = 82/366 (22%), Positives = 136/366 (37%), Gaps = 37/366 (10%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           +   +++  +V D G+     G++G D P+++ PS+ G+          G K  +     
Sbjct: 17  VYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTA-----DEGNKKIFSEQSI 71

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANRE 119
              R    LK  IE+G+V +WD  ++ W     NEL +      P LLTE   N   NR+
Sbjct: 72  GIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRK 131

Query: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
           K  +++ E     A Y+A  +    +A+GR   +V+D G       PI +G  L  +  R
Sbjct: 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRR 191

Query: 180 LDLAGRDLTDALMKILTERGY-------------------------SFTTTAEREIVRDM 214
             +AG+ +   + K L  +                            +     R   ++ 
Sbjct: 192 NFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQEC 251

Query: 215 KEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSMIGMEA 273
           KE L +I      E    + SS  ++S E P  + I    E R+   E LF P    + A
Sbjct: 252 KETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPA 311

Query: 274 AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKI--KV 331
              +    NS +                SG +     +     KE  A++ S+       
Sbjct: 312 ---NWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSA 368

Query: 332 VAPPER 337
             P E 
Sbjct: 369 DTPNET 374

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498

 Score =  277 bits (709), Expect = 2e-89
 Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 12/223 (5%)

Query: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL-MKILTERGYSFTTTAEREIVRDMKEK 217
                       Y     +                  + +   +     +R     + + 
Sbjct: 283 WNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKS 342

Query: 218 LAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIH 277
              +    E+E E              P         E  + P    +P     E  G+ 
Sbjct: 343 DKKVTPTEEKEQEA-------VSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLA 395

Query: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP-- 335
           +  Y+SIM  DVD+R  L  N+VL+GG++  PG++DR+  E+  + P S+K +++     
Sbjct: 396 DLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHT 454

Query: 336 -ERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
            ER+Y  W+GGSIL SL TF Q+W+ K EY+E G   +    F
Sbjct: 455 IERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 2e-05
 Identities = 32/224 (14%), Positives = 73/224 (32%), Gaps = 58/224 (25%)

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           +   +D+ D    IL++        ++  +      +L +  L  ++E+        +  
Sbjct: 32  NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG--TLRLFWTLLSKQEEMVQKFVEEVLRI 89

Query: 241 SYE-LPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNS---IMKCDV------- 289
           +Y+ L             +      QPSM+        +  YN      K +V       
Sbjct: 90  NYKFL---------MSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL 138

Query: 290 DIRKDLY-----GNIVLSGGSTMFPGIADRMSKEITALAPS---SMKIKVVAPPERKYSV 341
            +R+ L       N+++ G   +  G      K  T +A     S K++        + +
Sbjct: 139 KLRQALLELRPAKNVLIDG---V-LGSG----K--TWVALDVCLSYKVQCKMD----FKI 184

Query: 342 -WIG-------GSILASLST----FQQMWIAKAEYDESGPSIVH 373
            W+         ++L  L          W +++++  +    +H
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	377
3dwl_A	427	Actin-related protein 3; propellor, actin-binding,	100.0
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	100.0
2fxu_A	375	Alpha-actin-1, actin, alpha skeletal muscle; actin	100.0
1k8k_B	394	ARP2, actin-like protein 2; beta-propeller, struct	100.0
4fo0_A	593	Actin-related protein 8; chromatin remodeling, nuc	100.0
1k8k_A	418	ARP3, actin-like protein 3, actin-2; beta-propelle	100.0
4am6_A	655	Actin-like protein ARP8; nuclear protein, chromati	100.0
1jce_A	344	ROD shape-determining protein MREB; MBL, actin, HS	100.0
2v7y_A	509	Chaperone protein DNAK; HSP70, heat shock protein,	99.93
1dkg_D	383	Molecular chaperone DNAK; HSP70, GRPE, nucleotide	99.91
3h1q_A	272	Ethanolamine utilization protein EUTJ; ethanolamin	99.91
3qfu_A	394	78 kDa glucose-regulated protein homolog; HSP70, K	99.91
3i33_A	404	Heat shock-related 70 kDa protein 2; protein-ADP c	99.88
2kho_A	605	Heat shock protein 70; molecular chaperone, HSP70,	99.85
1yuw_A	554	Heat shock cognate 71 kDa protein; chaperone; 2.60	99.85
3d2f_A	675	Heat shock protein homolog SSE1; nucleotide exchan	99.83
4gni_A	409	Putative heat shock protein; HSP70-type ATPase, AT	99.82
4b9q_A	605	Chaperone protein DNAK; HET: ATP; 2.40A {Escherich	99.78
2ych_A	377	Competence protein PILM; cell cycle, type IV pilus	99.74
2fsj_A	346	Hypothetical protein TA0583; actin homologs, archa	99.72
4a2a_A	419	Cell division protein FTSA, putative; cell cycle,	99.67
2zgy_A	320	Plasmid segregation protein PARM; plasmid partitio	99.55
4apw_A	329	ALP12; actin-like protein; 19.70A {Clostridium tet	99.46
3js6_A	355	Uncharacterized PARM protein; partition, segregati	99.42
2d0o_A	610	DIOL dehydratase-reactivating factor large subunit	98.9
1nbw_A	607	Glycerol dehydratase reactivase alpha subunit; mol	98.88
4ehu_A	276	Activator of 2-hydroxyisocaproyl-COA dehydratase;	98.51
1hux_A	270	Activator of (R)-2-hydroxyglutaryl-COA dehydratase	97.54
1t6c_A	315	Exopolyphosphatase; alpha/beta protein, actin-like	96.58
2ews_A	287	Pantothenate kinase; PANK, structural genomics, st	96.33
2gup_A	292	ROK family protein; sugar kinase, streptococcus pn	96.19
3cer_A	343	Possible exopolyphosphatase-like protein; NESG, BL	96.04
3mdq_A	315	Exopolyphosphatase; structural genomics, joint cen	95.85
1u6z_A	513	Exopolyphosphatase; alpha/beta protein, askha (ace	95.68
3vgl_A	321	Glucokinase; ROK family, transferase; HET: BGC ANP	95.57
3hi0_A	508	Putative exopolyphosphatase; 17739545, structural	95.37
4db3_A	327	Glcnac kinase, N-acetyl-D-glucosamine kinase; stru	95.2
3r8e_A	321	Hypothetical sugar kinase; ribonuclease H-like mot	95.16
2i7n_A	360	Pantothenate kinase 1; PANK, transferase; HET: ACO	94.82
2qm1_A	326	Glucokinase; alpha-beta structure, putative helix-	93.86
3cet_A	334	Conserved archaeal protein; Q6M145, MRR63, NESG, X	92.97
3djc_A	266	Type III pantothenate kinase; structural genomics,	92.19
2h3g_X	268	Biosynthetic protein; pantothenate kinase, anthrax	90.61
3bex_A	249	Type III pantothenate kinase; actin-like fold, ATP	89.37
3zx3_A	452	Ectonucleoside triphosphate diphosphohydrolase 1;	87.76
1zbs_A	291	Hypothetical protein PG1100; alpha-beta protein.,	84.31
1zc6_A	305	Probable N-acetylglucosamine kinase; NESG, Q7NU07_	81.42

>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.3e-81  Score=603.85  Aligned_cols=369  Identities=37%  Similarity=0.678  Sum_probs=321.6

Q ss_pred             CCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCC----------------------CccccCCCcceeeccchhcc
Q 017089            6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT----------------------GVMVGMGQKDAYVGDEAQSK   63 (377)
Q Consensus         6 ~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~----------------------~~~~~~~~~~~~vg~~~~~~   63 (377)
                      +.++||||+||+++|+||||++.|+++|||+++++++.                      ..+.+..+.+.+||+++...
T Consensus         4 ~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~   83 (427)
T 3dwl_A            4 FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKK   83 (427)
T ss_dssp             CCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHT
T ss_pred             CCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhC
Confidence            67899999999999999999999999999999998753                      11224455688999999877


Q ss_pred             cC-cceeeccccCCccCCHHHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccc
Q 017089           64 RG-ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL  142 (377)
Q Consensus        64 ~~-~~~~~~p~~~g~i~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~  142 (377)
                      +. ...+++|+++|.|.|||+++++|+|+|.+.|++++.++|+++++|+++++..|+++++++||.+++++++++.+++|
T Consensus        84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vl  163 (427)
T 3dwl_A           84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVL  163 (427)
T ss_dssp             HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHH
T ss_pred             cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHH
Confidence            64 67899999999999999999999999988999999999999999999999999999999999999999999999999


Q ss_pred             cccccC--------CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHH
Q 017089          143 SLYASG--------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDM  214 (377)
Q Consensus       143 a~~~~g--------~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~i  214 (377)
                      |+|++|        .++|+|||+|++.|+|+||++|+++.++.+++++||++++++|.++|+++++.   ..+.+.++++
T Consensus       164 a~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~I  240 (427)
T 3dwl_A          164 ALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERI  240 (427)
T ss_dssp             HHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHH
T ss_pred             HHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHH
Confidence            999998        68999999999999999999999999999999999999999999999887765   3466889999


Q ss_pred             HHhccceecCHHHHHHHhccCCCcceEEEc--CCCc--EEeeCCccccccccCCCCccCCCc-CCChHHHHHHHHhcCCH
Q 017089          215 KEKLAYIALDYEQELETAKTSSAVEKSYEL--PDGQ--VITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKCDV  289 (377)
Q Consensus       215 k~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--p~~~--~i~i~~~~~~~~E~lf~p~~~~~~-~~~l~~~I~~~i~~~~~  289 (377)
                      |+++|||+.|++++++.........+.|.+  |||.  .+.++.+||++||+||+|++++.+ ..+|+++|.++|.+||+
T Consensus       241 Ke~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~  320 (427)
T 3dwl_A          241 KEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPI  320 (427)
T ss_dssp             HHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCH
T ss_pred             HHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCH
Confidence            999999999998888765443333556777  8887  788999999999999999999988 48999999999999999


Q ss_pred             HHHHHhhcCcccccCCcCCcChHHHHHHHHHhhC--------------CCCceEEEECCCCCccccchhhhhhhcccccc
Q 017089          290 DIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ  355 (377)
Q Consensus       290 ~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~--------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~  355 (377)
                      |+|+.|++|||||||+|++|||.+||++||+.+.              |...+++|..+++|.+++|+||||+|++++|+
T Consensus       321 dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f~  400 (427)
T 3dwl_A          321 DVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFG  400 (427)
T ss_dssp             HHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTHH
T ss_pred             HHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccchh
Confidence            9999999999999999999999999999999886              45668999999999999999999999999999


Q ss_pred             cccccHHHHhhcCCcccccccC
Q 017089          356 QMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       356 ~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ++||||+||+|+|+++++|+++
T Consensus       401 ~~witk~EYeE~G~~iv~~~~~  422 (427)
T 3dwl_A          401 SYCHTKADYEEYGASIARRYQI  422 (427)
T ss_dssp             HHSEEHHHHHHSCGGGGSCCCC
T ss_pred             heeEEHHHHhhhChHhheeccc
Confidence            9999999999999999999974

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-79  Score=593.37  Aligned_cols=366  Identities=31%  Similarity=0.569  Sum_probs=331.4

Q ss_pred             CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccc-hhcccCcceeeccccCCccCCH
Q 017089            3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE-AQSKRGILTLKYPIEHGIVSNW   81 (377)
Q Consensus         3 ~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~~~~~~~~p~~~g~i~d~   81 (377)
                      .+++..+||||+||.+||+||+|++.|++++||+++++++..      ++..+||++ +...++...+++|+++|.|.||
T Consensus        19 ggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dw   92 (498)
T 3qb0_A           19 GGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDW   92 (498)
T ss_dssp             CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEESCH
T ss_pred             CCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEccH
Confidence            467889999999999999999999999999999999987542      456789997 5555777899999999999999


Q ss_pred             HHHHHHHHHhcccccccCCCCC-cEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCC
Q 017089           82 DDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG  160 (377)
Q Consensus        82 ~~~~~~~~~~~~~~L~~~~~~~-~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~  160 (377)
                      |+++.+|+|+|.+.|++.+.++ |+++++|++++...|+++++++||.+++++++++++++||+|++|.++|+|||+|++
T Consensus        93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g  172 (498)
T 3qb0_A           93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD  172 (498)
T ss_dssp             HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred             HHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence            9999999999988899999999 999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHc------------------CCCccch------h-HHHHHHHHH
Q 017089          161 VSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER------------------GYSFTTT------A-EREIVRDMK  215 (377)
Q Consensus       161 ~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~------------------~~~~~~~------~-~~~~~~~ik  215 (377)
                      .|+|+||++|.++.+++.++++||++++++|.++|+++                  ++.+...      . +.++++++|
T Consensus       173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK  252 (498)
T 3qb0_A          173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK  252 (498)
T ss_dssp             CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred             cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999864                  3333221      2 345899999


Q ss_pred             HhccceecC--HHHHHHHhccCCCcceEEEcCCCcEEeeCCc-cccccccCCCCccCCC---------------------
Q 017089          216 EKLAYIALD--YEQELETAKTSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSMIGM---------------------  271 (377)
Q Consensus       216 ~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~-~~~~~E~lf~p~~~~~---------------------  271 (377)
                      +++|+|+.+  ++++....  .....+.|++|||+.|.++.| ||++||.||+|++++.                     
T Consensus       253 E~~c~Va~~~~~~~~~~~~--~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~  330 (498)
T 3qb0_A          253 ETLCHICPTKTLEETKTEL--SSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP  330 (498)
T ss_dssp             HHTCCCCSSCHHHHHHHHH--HTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred             HhhEEecCCccHhHHhhhc--cCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence            999999987  55443222  234578999999999999999 9999999999987643                     


Q ss_pred             -----------------------------------------------------------cCCChHHHHHHHHhcCCHHHH
Q 017089          272 -----------------------------------------------------------EAAGIHETTYNSIMKCDVDIR  292 (377)
Q Consensus       272 -----------------------------------------------------------~~~~l~~~I~~~i~~~~~~~~  292 (377)
                                                                                 +..||+++|.++|++||.|.|
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r  410 (498)
T 3qb0_A          331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR  410 (498)
T ss_dssp             CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence                                                                       567999999999999999999


Q ss_pred             HHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC---CCCccccchhhhhhhcccccccccccHHHHhhcCC
Q 017089          293 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWIAKAEYDESGP  369 (377)
Q Consensus       293 ~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~---~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~  369 (377)
                      +.|++||||+||+|++|||.+||++||+.+.| ..+++|.++   ++|.+++|+||||+|++.+|+++||||+||+|+|+
T Consensus       411 ~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~  489 (498)
T 3qb0_A          411 ATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGV  489 (498)
T ss_dssp             HHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCC
T ss_pred             HHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCc
Confidence            99999999999999999999999999999999 789999988   78999999999999999999999999999999999


Q ss_pred             -cccccccC
Q 017089          370 -SIVHRKCF  377 (377)
Q Consensus       370 -~~~~~k~~  377 (377)
                       .||+|||.
T Consensus       490 ~~iv~~kc~  498 (498)
T 3qb0_A          490 ERLLNDRFR  498 (498)
T ss_dssp             HHHHHHTTC
T ss_pred             HhhccccCc
Confidence             99999994

>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...

Probab=100.00  E-value=3.1e-77  Score=568.92  Aligned_cols=374  Identities=87%  Similarity=1.392  Sum_probs=342.5

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHH
Q 017089            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         4 ~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~   83 (377)
                      +++.++||||+||+++|+||++++.|++++||+++++++...+.+.+..+++||+++...++...+++|+++|.+.||+.
T Consensus         2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~   81 (375)
T 2fxu_A            2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD   81 (375)
T ss_dssp             --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred             CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence            46789999999999999999999999999999999988776555555677899999988888889999999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceE
Q 017089           84 MEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH  163 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~  163 (377)
                      ++.+|+|+|.+.|+.+++++++++++|+.++..+|+++++++||.+++++++++++|+||+|++|.++++|||+|+++|+
T Consensus        82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~  161 (375)
T 2fxu_A           82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH  161 (375)
T ss_dssp             HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred             HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence            99999999988899988899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEE
Q 017089          164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE  243 (377)
Q Consensus       164 i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~  243 (377)
                      |+||++|.++.++..++++||++++++|.++|..+++++....+.+.++++|+++|+++.++.++++...........|.
T Consensus       162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~  241 (375)
T 2fxu_A          162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE  241 (375)
T ss_dssp             EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred             EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence            99999999998888899999999999999999988888876667889999999999999998887766554445678999


Q ss_pred             cCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhC
Q 017089          244 LPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALA  323 (377)
Q Consensus       244 ~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~  323 (377)
                      +|||+.+.++.+||.++|.||+|++++.+..+|.++|.++|.+||.++|+.+++|||||||+|++|||.+||++||..+.
T Consensus       242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~  321 (375)
T 2fxu_A          242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA  321 (375)
T ss_dssp             CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence            99999999999999999999999999989999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      |...++++..+++|.+++|+||+++|++..|++.||||+||+|+|+++++||||
T Consensus       322 p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~  375 (375)
T 2fxu_A          322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF  375 (375)
T ss_dssp             CTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred             CCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence            988889999999999999999999999999999999999999999999999997

>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*

Probab=100.00  E-value=2.1e-76  Score=566.01  Aligned_cols=372  Identities=47%  Similarity=0.887  Sum_probs=164.8

Q ss_pred             CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcc-c-cCCCcceeeccchhcccCcceeeccccCCccCC
Q 017089            3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM-V-GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN   80 (377)
Q Consensus         3 ~~~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~-~-~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d   80 (377)
                      .+.+.++||||+||+++|+||++++.|++++||+++++++...+ . +....++++|+++...++...+++|+++|.+.|
T Consensus         2 ~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~d   81 (394)
T 1k8k_B            2 DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRN   81 (394)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEec
Confidence            35577899999999999999999999999999999988765432 1 223467889999988877788999999999999


Q ss_pred             HHHHHHHHHHhc-ccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCC
Q 017089           81 WDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD  159 (377)
Q Consensus        81 ~~~~~~~~~~~~-~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~  159 (377)
                      |+.++.+|+|+| ++.|+.+++++++++++|+.++...|+++++++||.+++++++++++|+||+|++|.++++|||+|+
T Consensus        82 wd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~  161 (394)
T 1k8k_B           82 WDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGD  161 (394)
T ss_dssp             ------------------------------------------------------------------------CCEEEECS
T ss_pred             HHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCC
Confidence            999999999999 8899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcc
Q 017089          160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE  239 (377)
Q Consensus       160 ~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~  239 (377)
                      ++|+|+||++|.++.++..++++||++++++|.++|..+++++....+.+.++++|+++|+++.++..+++.........
T Consensus       162 g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~  241 (394)
T 1k8k_B          162 GVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV  241 (394)
T ss_dssp             SCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred             CceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence            99999999999999988899999999999999999999888887666789999999999999999877765544344456


Q ss_pred             eEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHH
Q 017089          240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI  319 (377)
Q Consensus       240 ~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL  319 (377)
                      ..|.+|||+.+.++.+||.++|+||+|++++.+..+|+++|.++|.+||.+.|+.+++|||||||+|++|||.+||++||
T Consensus       242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el  321 (394)
T 1k8k_B          242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL  321 (394)
T ss_dssp             EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred             eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhC-----------CCCceEEEECCCCCccccchhhhhhhcccccc-cccccHHHHhhcCCccccc
Q 017089          320 TALA-----------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWIAKAEYDESGPSIVHR  374 (377)
Q Consensus       320 ~~~~-----------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~-~~~itr~~y~e~G~~~~~~  374 (377)
                      ..+.           |...+++|..+++|.+++|+|||++|++++|+ ++||||+||+|+|+++++|
T Consensus       322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~  388 (394)
T 1k8k_B          322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK  388 (394)
T ss_dssp             HHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred             HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence            9987           77778999999999999999999999999999 9999999999999999987

>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.1e-72  Score=568.97  Aligned_cols=370  Identities=21%  Similarity=0.387  Sum_probs=294.0

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcc----------------------------------------
Q 017089            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM----------------------------------------   46 (377)
Q Consensus         7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~----------------------------------------   46 (377)
                      +++||||+||.++|+|||||+.|+. +|++++++......                                        
T Consensus        15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (593)
T 4fo0_A           15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN   93 (593)
T ss_dssp             GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred             CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence            4589999999999999999999974 69999987532110                                        


Q ss_pred             ---------------------------------ccCCCcceeeccchhc--ccCcceeeccccCC-----------ccCC
Q 017089           47 ---------------------------------VGMGQKDAYVGDEAQS--KRGILTLKYPIEHG-----------IVSN   80 (377)
Q Consensus        47 ---------------------------------~~~~~~~~~vg~~~~~--~~~~~~~~~p~~~g-----------~i~d   80 (377)
                                                       ......+++||++|+.  ..+.+.+++|+++|           .+.+
T Consensus        94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~  173 (593)
T 4fo0_A           94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV  173 (593)
T ss_dssp             SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred             ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence                                             0112356899999975  35678999999999           4679


Q ss_pred             HHHHHHHHHHhcccccccCCCC---CcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeC
Q 017089           81 WDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS  157 (377)
Q Consensus        81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDi  157 (377)
                      |+++|.+|+|+|.+.|++.+++   ||+||++|+++++..|+++++++||.|++++++++++++||+|++|++||||||+
T Consensus       174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi  253 (593)
T 4fo0_A          174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV  253 (593)
T ss_dssp             HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence            9999999999998899998765   9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCcc-----chhHHHHHHHHHHhccceecCHHHHHH--
Q 017089          158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT-----TTAEREIVRDMKEKLAYIALDYEQELE--  230 (377)
Q Consensus       158 G~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~-----~~~~~~~~~~ik~~~~~v~~~~~~~~~--  230 (377)
                      |++.|+|+||+||+++.++..++++||++++++|.++|+.+++.+.     ...+++.++++|+++|+++.++..+..  
T Consensus       254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~  333 (593)
T 4fo0_A          254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE  333 (593)
T ss_dssp             CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred             CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence            9999999999999999999999999999999999999999887654     345788999999999999876421100  


Q ss_pred             ----------------------H-----h------------------------------------------ccCCCcceE
Q 017089          231 ----------------------T-----A------------------------------------------KTSSAVEKS  241 (377)
Q Consensus       231 ----------------------~-----~------------------------------------------~~~~~~~~~  241 (377)
                                            .     +                                          .........
T Consensus       334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (593)
T 4fo0_A          334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS  413 (593)
T ss_dssp             EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred             hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence                                  0     0                                          000112346


Q ss_pred             EEcCCCcEEeeCCccccccccCCCCccC--------------------------------CCcCCChHHHHHHHHhcCC-
Q 017089          242 YELPDGQVITIGAERFRCPEVLFQPSMI--------------------------------GMEAAGIHETTYNSIMKCD-  288 (377)
Q Consensus       242 ~~~p~~~~i~i~~~~~~~~E~lf~p~~~--------------------------------~~~~~~l~~~I~~~i~~~~-  288 (377)
                      +..|+|..+.++.+++.++|.||.|+..                                +.+..+|+++|.++|.+|+ 
T Consensus       414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~  493 (593)
T 4fo0_A          414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS  493 (593)
T ss_dssp             ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred             ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence            7789999999999999999999998642                                1235689999999999997 


Q ss_pred             HHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCc-----eEEEECCC---CCccccchhhhhhhccccccccccc
Q 017089          289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSM-----KIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIA  360 (377)
Q Consensus       289 ~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~-----~v~v~~~~---~~~~~~w~Gasi~a~l~~~~~~~it  360 (377)
                      .|.|+.|++|||||||+|++|||.+||++||+.++|...     +++|+.+|   ||.+++|+||||+|++++|+++|||
T Consensus       494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wIt  573 (593)
T 4fo0_A          494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIY  573 (593)
T ss_dssp             HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEE
T ss_pred             HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeEC
Confidence            699999999999999999999999999999999998643     58999887   8999999999999999999999999


Q ss_pred             HHHHhhcCCcccccccC
Q 017089          361 KAEYDESGPSIVHRKCF  377 (377)
Q Consensus       361 r~~y~e~G~~~~~~k~~  377 (377)
                      |+||+|+|+++|++||.
T Consensus       574 k~EYeE~G~~il~~kc~  590 (593)
T 4fo0_A          574 QREWQRFGVRMLRERAA  590 (593)
T ss_dssp             HHHHHHHTTHHHHHHCS
T ss_pred             HHHHHhhCcHHHhhcCC
Confidence            99999999999999995

>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A

Probab=100.00  E-value=4.6e-71  Score=534.32  Aligned_cols=370  Identities=39%  Similarity=0.686  Sum_probs=332.0

Q ss_pred             CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCc--------cccCCCcceeeccchhcccCcceeeccccCC
Q 017089            5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHG   76 (377)
Q Consensus         5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g   76 (377)
                      .+.++||||+||+++|+||++++.|++++||+++++++...        +.+....+++||+++...++ ..+++|+++|
T Consensus         3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~-~~~~~pi~~G   81 (418)
T 1k8k_A            3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPT-YATKWPIRHG   81 (418)
T ss_dssp             CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTT-SEEECCEETT
T ss_pred             CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCC-CEEeccccCC
Confidence            46689999999999999999999999999999998876421        22223346899999987764 7899999999


Q ss_pred             ccCCHHHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccc---------c
Q 017089           77 IVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA---------S  147 (377)
Q Consensus        77 ~i~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~---------~  147 (377)
                      .+.||+.++.+|+|+|.+.|+++++++++++++|+.++..+|+.+.+++||.+|+++++++++|+||+|+         .
T Consensus        82 ~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~  161 (418)
T 1k8k_A           82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER  161 (418)
T ss_dssp             EESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred             EECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence            9999999999999999778998888999999999999999999999999999999999999999999998         5


Q ss_pred             CCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHH
Q 017089          148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQ  227 (377)
Q Consensus       148 g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~  227 (377)
                      +. +++|||+|+++|+|+||++|.++.++...+++||++++++|.++|.+++..+....+.+.++++|+++|++..++.+
T Consensus       162 ~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~  240 (418)
T 1k8k_A          162 TL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK  240 (418)
T ss_dssp             CC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred             CC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence            56 89999999999999999999999888899999999999999999998888776666788999999999999998877


Q ss_pred             HHHHhccC-CCcceEEEcCCCc-----EEeeCCccccccccCCCCccCCCcC-CChHHHHHHHHhcCCHHHHHHhhcCcc
Q 017089          228 ELETAKTS-SAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSMIGMEA-AGIHETTYNSIMKCDVDIRKDLYGNIV  300 (377)
Q Consensus       228 ~~~~~~~~-~~~~~~~~~p~~~-----~i~i~~~~~~~~E~lf~p~~~~~~~-~~l~~~I~~~i~~~~~~~~~~l~~nIi  300 (377)
                      ++++.... ......|.+||+.     .+.++.+||.++|+||+|++.+.+. .+|.++|.++|.+||.+.|+.+++|||
T Consensus       241 e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~Iv  320 (418)
T 1k8k_A          241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIV  320 (418)
T ss_dssp             HHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEE
T ss_pred             HHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceE
Confidence            76544321 1234689999998     8999999999999999999887764 799999999999999999999999999


Q ss_pred             cccCCcCCcChHHHHHHHHHhhC----------------CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHH
Q 017089          301 LSGGSTMFPGIADRMSKEITALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY  364 (377)
Q Consensus       301 l~GG~s~i~gl~~rl~~eL~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y  364 (377)
                      ||||+|++|||.+||++||....                |...++++..+++|.+++|+|||++|++++|++.||||+||
T Consensus       321 L~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey  400 (418)
T 1k8k_A          321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDY  400 (418)
T ss_dssp             EESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHH
T ss_pred             EeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHH
Confidence            99999999999999999999875                56677999999999999999999999999999999999999


Q ss_pred             hhcCCccccccc
Q 017089          365 DESGPSIVHRKC  376 (377)
Q Consensus       365 ~e~G~~~~~~k~  376 (377)
                      +|+|+++++|||
T Consensus       401 ~e~G~~~~~~~~  412 (418)
T 1k8k_A          401 EEIGPSICRHNP  412 (418)
T ss_dssp             HHHCGGGGGCCC
T ss_pred             hhhCHHHHhhhc
Confidence            999999999976

>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*

Probab=100.00  E-value=1.3e-59  Score=457.66  Aligned_cols=362  Identities=22%  Similarity=0.413  Sum_probs=303.0

Q ss_pred             CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCC---------Cc------------------------------
Q 017089            5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT---------GV------------------------------   45 (377)
Q Consensus         5 ~~~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~---------~~------------------------------   45 (377)
                      +..++|||++||.++|+|+|.|..|. .+|++++++...         +.                              
T Consensus        38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k  116 (655)
T 4am6_A           38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYK  116 (655)
T ss_dssp             CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcC
Confidence            45788999999999999999999998 669999865311         00                              


Q ss_pred             ---------------------c----------ccCC-Ccceeeccchhcc-cCcceeeccccCCccC----C-------H
Q 017089           46 ---------------------M----------VGMG-QKDAYVGDEAQSK-RGILTLKYPIEHGIVS----N-------W   81 (377)
Q Consensus        46 ---------------------~----------~~~~-~~~~~vg~~~~~~-~~~~~~~~p~~~g~i~----d-------~   81 (377)
                                           .          .|.+ ..+++||++|..+ ++.+.+++|+++|.+.    |       |
T Consensus       117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~W  196 (655)
T 4am6_A          117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELI  196 (655)
T ss_dssp             CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred             CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccH
Confidence                                 0          0001 2477899999874 6778999999999998    8       9


Q ss_pred             HHHHHHHHHhccc-ccccCCC---CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccC-CceEEEEe
Q 017089           82 DDMEKIWHHTFYN-ELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG-RTTGIVLD  156 (377)
Q Consensus        82 ~~~~~~~~~~~~~-~L~~~~~---~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~~~lVVD  156 (377)
                      ++++.+|+|+|.+ .|++.++   ++|+++++|+++++..|+++++++||.|++++++++.+++||+|++| .++|||||
T Consensus       197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVD  276 (655)
T 4am6_A          197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVN  276 (655)
T ss_dssp             HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEE
T ss_pred             HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEc
Confidence            9999999999973 8999886   89999999999999999999999999999999999999999999999 69999999


Q ss_pred             CCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCC-----CccchhHHHHHHHHHHhccce-ecCHHHHHH
Q 017089          157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY-----SFTTTAEREIVRDMKEKLAYI-ALDYEQELE  230 (377)
Q Consensus       157 iG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~ik~~~~~v-~~~~~~~~~  230 (377)
                      +|++.|+|+||++|+++.+++.++++||++++++|.++|.++|+     ++....+.+++++||+++||| ..|..    
T Consensus       277 iG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~----  352 (655)
T 4am6_A          277 IGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA----  352 (655)
T ss_dssp             ECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC----
T ss_pred             CCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh----
Confidence            99999999999999999999999999999999999999999987     557778899999999999999 44431    


Q ss_pred             HhccCCCcceEE--EcCCC----cEEeeCCccccccccCCCCccCC----------------------------------
Q 017089          231 TAKTSSAVEKSY--ELPDG----QVITIGAERFRCPEVLFQPSMIG----------------------------------  270 (377)
Q Consensus       231 ~~~~~~~~~~~~--~~p~~----~~i~i~~~~~~~~E~lf~p~~~~----------------------------------  270 (377)
                            .....|  ..|++    ..+.++.|||++||+||.|++++                                  
T Consensus       353 ------~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~  426 (655)
T 4am6_A          353 ------VQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLS  426 (655)
T ss_dssp             ------SEEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHH
T ss_pred             ------hhhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccchh
Confidence                  112222  33554    36889999999999999997531                                  


Q ss_pred             ---------------------------------------------CcCCChHHHHHHHHhc-C---CHHHHHHhhcCccc
Q 017089          271 ---------------------------------------------MEAAGIHETTYNSIMK-C---DVDIRKDLYGNIVL  301 (377)
Q Consensus       271 ---------------------------------------------~~~~~l~~~I~~~i~~-~---~~~~~~~l~~nIil  301 (377)
                                                                   ....+|..+|.++|.. |   +....+++++||+|
T Consensus       427 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nili  506 (655)
T 4am6_A          427 QFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILI  506 (655)
T ss_dssp             HHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEE
T ss_pred             HHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEE
Confidence                                                         0024889999999973 2   44445599999999


Q ss_pred             ccCCcCCcChHHHHHHHHHhhCC---------------------------------------------------------
Q 017089          302 SGGSTMFPGIADRMSKEITALAP---------------------------------------------------------  324 (377)
Q Consensus       302 ~GG~s~i~gl~~rl~~eL~~~~~---------------------------------------------------------  324 (377)
                      |||+|+||||...|.+.+.-.-|                                                         
T Consensus       507 vGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  586 (655)
T 4am6_A          507 VGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQH  586 (655)
T ss_dssp             ESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHH
T ss_pred             EcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhh
Confidence            99999999998777666543211                                                         


Q ss_pred             ----------CCceEEEECCCCC---ccccchhhhhhhcccccccccccHHHHhhcCCcccccccC
Q 017089          325 ----------SSMKIKVVAPPER---KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF  377 (377)
Q Consensus       325 ----------~~~~v~v~~~~~~---~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                                .-.+|+|..+|.+   .+.+|+|||++|+++.|+++||||+||+|+|+++|++||+
T Consensus       587 ~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~  652 (655)
T 4am6_A          587 QNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI  652 (655)
T ss_dssp             HHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred             hhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence                      0124889998854   8999999999999999999999999999999999999984

>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A

Probab=100.00  E-value=1.6e-36  Score=285.36  Aligned_cols=307  Identities=15%  Similarity=0.212  Sum_probs=238.6

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhccc----CcceeeccccCCccCCHHH
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~d~~~   83 (377)
                      .+|+||+||+++++|+.++. |.+.+||+++.+.+.       +..+++|++|....    ....+.+|+++|.+.+|+.
T Consensus         4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~   75 (344)
T 1jce_A            4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV   75 (344)
T ss_dssp             CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred             ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHH
Confidence            68999999999999998765 666789999876531       23457999987652    3445689999999999999


Q ss_pred             HHHHHHHhcccccccC-CCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeC
Q 017089           84 MEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDS  157 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~-~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi  157 (377)
                      .+++|.+++.+..... ....++++++|+.++..+|+.+.+. ++.+|++.+.++++|+||+++++.     .+.+|||+
T Consensus        76 ~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDi  154 (344)
T 1jce_A           76 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDI  154 (344)
T ss_dssp             HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEE
T ss_pred             HHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEe
Confidence            9999999984332222 4468899999999999999998885 599999999999999999999986     68999999


Q ss_pred             CCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHc-CCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCC
Q 017089          158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER-GYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS  236 (377)
Q Consensus       158 G~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~-~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~  236 (377)
                      |+++|+++++..|.++  .....++||+++++.|.+++.++ +..+    ..+.++++|++++....+...+        
T Consensus       155 Gggttdvsv~~~~~~~--~~~~~~lGG~~id~~l~~~l~~~~~~~~----~~~~ae~~K~~l~~~~~~~~~~--------  220 (344)
T 1jce_A          155 GGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRVAI----GERTAERVKIEIGNVFPSKEND--------  220 (344)
T ss_dssp             CSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCEEC----CHHHHHHHHHHHCBCSCCHHHH--------
T ss_pred             CCCeEEEEEEEcCCEE--eeCCCCccChhHHHHHHHHHHHHhCccc----CHHHHHHHHHHHhccCccccCC--------
Confidence            9999999999999877  45678999999999999999754 2222    3567999999999875443211        


Q ss_pred             CcceEEEc-----CCCc--EEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhh-cCcccccCCcCC
Q 017089          237 AVEKSYEL-----PDGQ--VITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLY-GNIVLSGGSTMF  308 (377)
Q Consensus       237 ~~~~~~~~-----p~~~--~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~-~nIil~GG~s~i  308 (377)
                        ...+.+     .+|.  .+.++.+++.   .+|+|.+     ..+.+.|.++|.+++.+.+..++ ++|+||||+|++
T Consensus       221 --~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~  290 (344)
T 1jce_A          221 --ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLL  290 (344)
T ss_dssp             --HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCS
T ss_pred             --cceEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccc
Confidence              112222     2554  3455544443   2444421     23788889999999988888888 799999999999


Q ss_pred             cChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc-ccccc
Q 017089          309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQ  355 (377)
Q Consensus       309 ~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~-l~~~~  355 (377)
                      |||.++|++++..        ++..+++|.+++|.||++++. ++.|+
T Consensus       291 p~l~~~l~~~~~~--------~v~~~~~p~~ava~Gaa~~a~~~~~~~  330 (344)
T 1jce_A          291 RGLDTLLQKETGI--------SVIRSEEPLTAVAKGAGMVLDKVNILK  330 (344)
T ss_dssp             BTHHHHHHHHHSS--------CEEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred             hHHHHHHHHHHCC--------CccccCChHHHHHHHHHHHHhChHHHH
Confidence            9999999999931        234467889999999999998 45553

>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}

Probab=99.93  E-value=9.4e-27  Score=229.39  Aligned_cols=297  Identities=16%  Similarity=0.213  Sum_probs=202.1

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCC--------CCceeEecCCCCccccCCCcceeeccchhccc--C---cceeec---
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--G---ILTLKY---   71 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~~--------~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~---~~~~~~---   71 (377)
                      .+|+||+||+++++|++.+..|.++        +||+++..          +...++|++|....  +   ...+++   
T Consensus         3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg   72 (509)
T 2v7y_A            3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG   72 (509)
T ss_dssp             CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred             CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence            5899999999999999987767655        67777762          23467898876541  1   112222   


Q ss_pred             -ccc---CCccCCH-HHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccc
Q 017089           72 -PIE---HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS  143 (377)
Q Consensus        72 -p~~---~g~i~d~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a  143 (377)
                       |++   +|...+. +....+++++..   +.++  .....+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||
T Consensus        73 ~p~~~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~~~~~VitvPa~~~~~qr~a~~~a~-~~AGl~~~~li~Ep~AA  149 (509)
T 2v7y_A           73 TDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLG--EPVTRAVITVPAYFNDAQRQATKDAG-RIAGLEVERIINEPTAA  149 (509)
T ss_dssp             SCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHH
T ss_pred             CCcEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEecCHHHH
Confidence             565   5642222 223344444321   1122  33468999999999999999988875 88999999999999999


Q ss_pred             ccccCC-----ceEEEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHHHHHHHc-----CCCccchh----
Q 017089          144 LYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA----  206 (377)
Q Consensus       144 ~~~~g~-----~~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~----  206 (377)
                      +++++.     .+.+|+|+|+++++++.+.  +|.. +.......++||.++++.|.+++.++     +.++....    
T Consensus       150 Alay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~  229 (509)
T 2v7y_A          150 ALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQ  229 (509)
T ss_dssp             HHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHH
T ss_pred             HHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence            999886     4799999999999999876  3532 22223456899999999999988653     44443211    


Q ss_pred             -HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC------CC---cEEeeCCccccccccCCCCccCCCcCCCh
Q 017089          207 -EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG---QVITIGAERFRCPEVLFQPSMIGMEAAGI  276 (377)
Q Consensus       207 -~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------~~---~~i~i~~~~~~~~E~lf~p~~~~~~~~~l  276 (377)
                       -.+.++++|+.++...                ...+.+|      +|   ..+.++.+.+.   -+|+|-+     ..+
T Consensus       230 ~l~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~fe---~l~~~~~-----~~i  285 (509)
T 2v7y_A          230 RLKDAAEKAKKELSGVT----------------QTQISLPFISANENGPLHLEMTLTRAKFE---ELSAHLV-----ERT  285 (509)
T ss_dssp             HHHHHHHHHHHHTTTCS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHHH---HHTHHHH-----HTT
T ss_pred             HHHHHHHHHHHhcCCCC----------------cEEEEEeccccCCCCCeeEEEEEEHHHHH---HHHHHHH-----HHH
Confidence             1356788888877531                1122222      23   12344443332   3333311     226


Q ss_pred             HHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          277 HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       277 ~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+.|.++|..+.  +....+++|+|+||+|++|++.++|++.+..        ++..+.+|+.++|.||+++|..
T Consensus       286 ~~~i~~~L~~a~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~  350 (509)
T 2v7y_A          286 MGPVRQALQDAG--LTPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV  350 (509)
T ss_dssp             HHHHHHHHHHHT--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcC--CChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence            777777777654  2345678999999999999999999998842        2345678999999999999864

>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1

Probab=99.91  E-value=8e-25  Score=208.58  Aligned_cols=304  Identities=15%  Similarity=0.159  Sum_probs=196.8

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCC--------CCceeEecCCCCccccCCCcceeeccchhccc--Ccce----e----
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--GILT----L----   69 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~~--------~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~----~----   69 (377)
                      ..|.||+||+++.+++..+..|.++        +||+++...+         ...++|.++....  +...    +    
T Consensus         3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~---------~~~~~G~~A~~~~~~~~~~~~~~~k~~l   73 (383)
T 1dkg_D            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI   73 (383)
T ss_dssp             CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTT---------SCEEESHHHHTTSTTCGGGEEECGGGTT
T ss_pred             cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECC---------CCEEECHHHHHhhhhCccceeehhHHhh
Confidence            4799999999999998865444433        5777665332         2244665543220  0000    0    


Q ss_pred             --------------ecccc-------------CCc-cCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017089           70 --------------KYPIE-------------HGI-VSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR  118 (377)
Q Consensus        70 --------------~~p~~-------------~g~-i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~  118 (377)
                                    .+|++             .|. +...+....+++++..   ..++  .....+++++|..++..+|
T Consensus        74 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r  151 (383)
T 1dkg_D           74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR  151 (383)
T ss_dssp             TCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHH
T ss_pred             CCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence                          02322             232 2223444555555531   1222  2346799999999999999


Q ss_pred             HHHHhhccccCCCCeEEeeecccccccccCCc------eEEEEeCCCCceEEEEeeCC------ccc-ccceEEecccHH
Q 017089          119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEG------YAL-PHAILRLDLAGR  185 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~i~~v~~g------~~~-~~~~~~~~~GG~  185 (377)
                      +.+.+.+ +.+|++.+.++++|+||+++++..      +.+|||+|+++|+++.+..+      ... .......++||.
T Consensus       152 ~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~  230 (383)
T 1dkg_D          152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE  230 (383)
T ss_dssp             HHHHHHH-HHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHH
T ss_pred             HHHHHHH-HHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHH
Confidence            9988875 889999999999999999988653      78999999999999988754      221 112345699999


Q ss_pred             HHHHHHHHHHHHc-----CCCccch-----hHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCC-c--EEee
Q 017089          186 DLTDALMKILTER-----GYSFTTT-----AEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDG-Q--VITI  252 (377)
Q Consensus       186 ~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~-~--~i~i  252 (377)
                      ++++.|.+++.++     +.++...     ...+.++++|++++.....          .-..+..+..++| .  .+.+
T Consensus       231 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~----------~i~i~~~~~~~~G~~~~~~~i  300 (383)
T 1dkg_D          231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT----------DVNLPYITADATGPKHMNIKV  300 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEE----------EEEEEEEEEETTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCce----------EEEEecccccCCCCeeEEEEE
Confidence            9999999988654     4443321     1145688888888753200          0000111223344 2  2344


Q ss_pred             CCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEE
Q 017089          253 GAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVV  332 (377)
Q Consensus       253 ~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~  332 (377)
                      +.+.+.   .+|+|.+     ..+.+.|.++|.++..  .+..+++|+||||+|++|++.++|++++..        ++.
T Consensus       301 t~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~  362 (383)
T 1dkg_D          301 TRAKLE---SLVEDLV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPR  362 (383)
T ss_dssp             EHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCB
T ss_pred             eHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCC
Confidence            444432   3344411     2267777778877652  345568999999999999999999999842        344


Q ss_pred             CCCCCccccchhhhhhhcc
Q 017089          333 APPERKYSVWIGGSILASL  351 (377)
Q Consensus       333 ~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+.+|.+++|.||+++|..
T Consensus       363 ~~~~p~~ava~Gaa~~a~~  381 (383)
T 1dkg_D          363 KDVNPDEAVAIGAAVQGGV  381 (383)
T ss_dssp             CSSCTTTHHHHHHHHHTTT
T ss_pred             CCcChHHHHHHHHHHHHHh
Confidence            5678999999999999875

>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}

Probab=99.91  E-value=3.2e-24  Score=194.85  Aligned_cols=244  Identities=16%  Similarity=0.149  Sum_probs=179.8

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHHHHH
Q 017089            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK   86 (377)
Q Consensus         7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~~~   86 (377)
                      .-.++||+||.++|+.+..++. .     .++                 .+         .....|+++|.+.||+..+.
T Consensus        28 ~~~~gIDiGS~s~k~vi~~~~~-~-----~l~-----------------~~---------~~~~~~l~~g~i~d~~~~~~   75 (272)
T 3h1q_A           28 PYKVGVDLGTADIVLVVTDQEG-I-----PVA-----------------GA---------LKWASVVKDGLVVDYIGAIQ   75 (272)
T ss_dssp             CCEEEEECCSSEEEEEEECTTC-C-----EEE-----------------EE---------EEECCCCBTTBCTTHHHHHH
T ss_pred             CEEEEEEcccceEEEEEECCCC-c-----EEE-----------------EE---------eecccccCCCEEEcHHHHHH
Confidence            4579999999999998853221 1     111                 11         11236889999999999999


Q ss_pred             HHHHhccccccc-CCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceEEEEeCCCCceEEE
Q 017089           87 IWHHTFYNELRV-APEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV  165 (377)
Q Consensus        87 ~~~~~~~~~L~~-~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~  165 (377)
                      +|++++...... ......++++.|..+....++. ++.+++.+|++...+..++.|++++++..+++|||+|+++|+++
T Consensus        76 ~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~-~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~  154 (272)
T 3h1q_A           76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAEA-CGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIA  154 (272)
T ss_dssp             HHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTH-HHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred             HHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHH-HHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEE
Confidence            999997543333 2234567788887776666655 55567999999999999999999999999999999999999999


Q ss_pred             EeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC
Q 017089          166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP  245 (377)
Q Consensus       166 ~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p  245 (377)
                      ++.+|.++  .....++||.++++.+.+.+.         .+.+.++++|++++.-     ++....             
T Consensus       155 ~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~~-----~~~~~~-------------  205 (272)
T 3h1q_A          155 VIEKGKIT--ATFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSRH-----REIMRV-------------  205 (272)
T ss_dssp             EEETTEEE--EECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTTH-----HHHHHH-------------
T ss_pred             EEECCEEE--EEecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCCH-----HHHHHH-------------
Confidence            99999887  446789999999999998883         1356788999887621     111100             


Q ss_pred             CCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCC
Q 017089          246 DGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS  325 (377)
Q Consensus       246 ~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~  325 (377)
                                    .+.+++         .+.+.|.+.+.+++      ..++|+|+||+|++|||.++|++++.     
T Consensus       206 --------------~~~~~~---------~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~-----  251 (272)
T 3h1q_A          206 --------------VRPVIE---------KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLG-----  251 (272)
T ss_dssp             --------------HHHHHH---------HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHS-----
T ss_pred             --------------HHHHHH---------HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhC-----
Confidence                          011111         15666667776665      24699999999999999999999983     


Q ss_pred             CceEEEECCCCCccccchhhhhhh
Q 017089          326 SMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       326 ~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                         .++..+++|+++.|.||+++|
T Consensus       252 ---~~v~~~~~p~~a~a~Gaal~a  272 (272)
T 3h1q_A          252 ---KEVQVPIHPLLVTPLGIALFG  272 (272)
T ss_dssp             ---SCCBCCSSGGGHHHHHHHTTC
T ss_pred             ---CCccccCChHHHHHHHHHhcC
Confidence               234456789999999999875

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...

Probab=99.88  E-value=4.4e-23  Score=197.90  Aligned_cols=302  Identities=17%  Similarity=0.174  Sum_probs=186.4

Q ss_pred             CCCcEEEeCCCCceEEeeeCCCCCCC--------CCCceeEecCCCCccccCCCcceeeccchhcc--cCcceeeccccC
Q 017089            6 DIQPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK--RGILTLKYPIEH   75 (377)
Q Consensus         6 ~~~~vviD~Gs~~~k~G~~~~~~P~~--------~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~--~~~~~~~~p~~~   75 (377)
                      .+.+|.||+||+++++++..+..|..        .+||+++..          ....++|.+|...  .......+++++
T Consensus        22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~Kr   91 (404)
T 3i33_A           22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT----------DTERLIGDAAKNQVAMNPTNTIFDAKR   91 (404)
T ss_dssp             -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEEC----------SSCEEETHHHHHTTTTCSTTEECCGGG
T ss_pred             cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEEC----------CCCEEecHHHHHhhHhChhhhHHHHHH
Confidence            45689999999999999987655442        234544432          2356788877543  111222222222


Q ss_pred             Cc---------------------------------------cCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCC
Q 017089           76 GI---------------------------------------VSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLN  113 (377)
Q Consensus        76 g~---------------------------------------i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~  113 (377)
                      ..                                       +...+....+++++..   ..++  .....+++++|..+
T Consensus        92 ~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~--~~~~~~vitvPa~~  169 (404)
T 3i33_A           92 LIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLG--GKVHSAVITVPAYF  169 (404)
T ss_dssp             TTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEEEECTTC
T ss_pred             HhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhc--cCCCcEEEEECCCC
Confidence            11                                       1112333444444421   1222  23467999999999


Q ss_pred             CHHhHHHHHhhccccCCCCeEEeeecccccccccCC---------ceEEEEeCCCCceEEEEee--CCcc-cccceEEec
Q 017089          114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLD  181 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~---------~~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~  181 (377)
                      +..+|+.+.+.+ +.+|++.+.++++|.||+++++.         .+.+|+|+|+++|+++.+.  +|.. +.......+
T Consensus       170 ~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~  248 (404)
T 3i33_A          170 NDSQRQATKDAG-TITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH  248 (404)
T ss_dssp             CHHHHHHHHHHH-HHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETT
T ss_pred             CHHHHHHHHHHH-HHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCC
Confidence            999999887774 88999999999999999998864         3459999999999999875  3322 222234579


Q ss_pred             ccHHHHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEc---CCCc
Q 017089          182 LAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQ  248 (377)
Q Consensus       182 ~GG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---p~~~  248 (377)
                      +||.++++.+.+++.++     +..+....     -...+++.|+.++..                ....+.+   .++.
T Consensus       249 lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~g~  312 (404)
T 3i33_A          249 LGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSS----------------TQASIEIDSLYEGV  312 (404)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTS----------------SEEEEEEEEEETTE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcC----------------cceEEEEeeccCCc
Confidence            99999999999888432     22222110     023455566555421                1112222   1333


Q ss_pred             EEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCce
Q 017089          249 VITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK  328 (377)
Q Consensus       249 ~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~  328 (377)
                      .+.+.-.|..+ |-++.|-     ...+.+.|.++|..+..  ....++.|+||||+|++|++.++|++.+...      
T Consensus       313 ~~~~~i~r~~~-~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~------  378 (404)
T 3i33_A          313 DFYTSITRARF-EELNADL-----FRGTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK------  378 (404)
T ss_dssp             EEEEEEEHHHH-HHHTHHH-----HHHTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTTC------
T ss_pred             eeEEEEcHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHHHHHHHHHcCCC------
Confidence            33222122222 2233330     11255666666665432  2345688999999999999999999887322      


Q ss_pred             EEEECCCCCccccchhhhhhhcc
Q 017089          329 IKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       329 v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                       ++..+.+|+.+++.||+++|..
T Consensus       379 -~v~~~~~p~~ava~Gaa~~a~~  400 (404)
T 3i33_A          379 -ELNKSINPDEAVAYGAAVQAAI  400 (404)
T ss_dssp             -CCBCSSCTTTHHHHHHHHHHHH
T ss_pred             -CCCCCcCHHHHHHHHHHHHHHH
Confidence             3445678999999999999875

>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}

Probab=99.85  E-value=3.1e-21  Score=193.41  Aligned_cols=297  Identities=17%  Similarity=0.204  Sum_probs=190.3

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCC--------CCCceeEecCCCCccccCCCcceeeccchhcc-----c-Ccceee---
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK-----R-GILTLK---   70 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~--------~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~-----~-~~~~~~---   70 (377)
                      ..|.||+||+++.+++..+..|.+        .+||+++...+         ...++|.+|...     . ..+.++   
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~t~~~~Kr~i   73 (605)
T 2kho_A            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI   73 (605)
T ss_dssp             -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTT---------SCEEESHHHHTTTTTCGGGEEECGGGTT
T ss_pred             CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECC---------CcEEECHHHHHHhhhCCCCEeehhhHhh
Confidence            489999999999999886544432        25666665322         234566655332     0 000000   


Q ss_pred             ---------------cccc-------------CCccCC-HHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017089           71 ---------------YPIE-------------HGIVSN-WDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR  118 (377)
Q Consensus        71 ---------------~p~~-------------~g~i~d-~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~  118 (377)
                                     +|++             .|.... .+....+++++..   ..++  ..-..+++++|..++..+|
T Consensus        74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~v~~~VitVPa~f~d~qr  151 (605)
T 2kho_A           74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR  151 (605)
T ss_dssp             TCBSSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHC--SCCCEEEEEECTTCCHHHH
T ss_pred             CCCCCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCcEEEEEECCCCCHHHH
Confidence                           1322             232222 2334445555431   2233  2345799999999999999


Q ss_pred             HHHHhhccccCCCCeEEeeecccccccccCC------ceEEEEeCCCCceEEEEeeC------Ccc-cccceEEecccHH
Q 017089          119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYE------GYA-LPHAILRLDLAGR  185 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~~v~~------g~~-~~~~~~~~~~GG~  185 (377)
                      +.+.+.+ +.+|++.+.++++|.||++++|.      .+.+|+|+|+++++|+.+..      |.. +.......++||.
T Consensus       152 ~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~  230 (605)
T 2kho_A          152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE  230 (605)
T ss_dssp             HHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGG
T ss_pred             HHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHH
Confidence            9988776 88999999999999999998864      35799999999999998863      432 1122334689999


Q ss_pred             HHHHHHHHHHHHc-----CCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcC------CC-c
Q 017089          186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG-Q  248 (377)
Q Consensus       186 ~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------~~-~  248 (377)
                      ++++.|.+++.++     +.++....     -...++++|+.++...                ...+.+|      +| .
T Consensus       231 d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~  294 (605)
T 2kho_A          231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ----------------QTDVNLPYITADATGPK  294 (605)
T ss_dssp             GTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------EEEEEEEEEEEETTEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEecccccCCCCce
Confidence            9999999888653     44432211     1345777777776421                1122221      23 1


Q ss_pred             E--EeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCC
Q 017089          249 V--ITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS  325 (377)
Q Consensus       249 ~--i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~  325 (377)
                      .  +.++.+.|. +.+.+|..         +.+.|.++|..+..  ....++.|+||||+|++|++.+++++.+..    
T Consensus       295 ~~~~~itr~~fe~l~~~~~~~---------i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg~----  359 (605)
T 2kho_A          295 HMNIKVTRAKLESLVEDLVNR---------SIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK----  359 (605)
T ss_dssp             EEEEEEEHHHHHTTCCSTTGG---------GTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHSS----
T ss_pred             EEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHHHhcCC----
Confidence            1  233333332 22333332         77788888877642  234568999999999999999999988832    


Q ss_pred             CceEEEECCCCCccccchhhhhhhcc
Q 017089          326 SMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       326 ~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                          .+..+.+|+.+++.||+++|..
T Consensus       360 ----~~~~~~npd~aVA~GAa~~a~~  381 (605)
T 2kho_A          360 ----EPRKDVNPDEAVAIGAAVQGGV  381 (605)
T ss_dssp             ----CCBCSSCTTTHHHHHHHHHHTT
T ss_pred             ----CcCcCCCcchHHHHHHHHHHHH
Confidence                2345678899999999999874

>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*

Probab=99.85  E-value=7.7e-21  Score=188.78  Aligned_cols=216  Identities=17%  Similarity=0.211  Sum_probs=147.8

Q ss_pred             CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC-------ceEEEEeCCCCceEEEEee--CCcc
Q 017089          102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA  172 (377)
Q Consensus       102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~i~~v~--~g~~  172 (377)
                      -..+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||+++++.       .+.+|+|+|+++++++.+.  +|..
T Consensus       139 v~~~VitVPa~f~~~qr~a~~~A~-~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~  217 (554)
T 1yuw_A          139 VTNAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIF  217 (554)
T ss_dssp             CCEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcE
Confidence            357999999999999999988765 88999999999999999998863       4689999999999999887  6643


Q ss_pred             -cccceEEecccHHHHHHHHHHHHHH-----cCCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCCCcceE
Q 017089          173 -LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS  241 (377)
Q Consensus       173 -~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~  241 (377)
                       +.......++||.++++.|.+++..     .+.++....     -...++++|+.++...                ...
T Consensus       218 ~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~----------------~~~  281 (554)
T 1yuw_A          218 EVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST----------------QAS  281 (554)
T ss_dssp             EEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS----------------EEE
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc----------------eEE
Confidence             2223445799999999999988853     233332211     1245677777766421                122


Q ss_pred             EEcC---CCcEE--eeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHH
Q 017089          242 YELP---DGQVI--TIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS  316 (377)
Q Consensus       242 ~~~p---~~~~i--~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~  316 (377)
                      +.++   +|..+  .++.+.+   |-++.|-     ...+.+.|.+++..+.  +.+..++.|+||||+|++|++.++|+
T Consensus       282 i~i~~~~~g~~~~~~ltr~~~---e~l~~~~-----~~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~  351 (554)
T 1yuw_A          282 IEIDSLYEGIDFYTSITRARF---EELNADL-----FRGTLDPVEKALRDAK--LDKSQIHDIVLVGGSTRIPKIQKLLQ  351 (554)
T ss_dssp             EEETTCSSSCCEEEEEEHHHH---HHHTHHH-----HHHTTHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred             EEEeeccCCceEEEEEEHHHH---HHHHHHH-----HHHHHHHHHHHHHHcC--CChhhCcEEEEECCcccChHHHHHHH
Confidence            3332   23222  2222222   1222220     0114556666666542  22345689999999999999999998


Q ss_pred             HHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          317 KEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       317 ~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.+...       ++..+.+|..+++.||+++|..
T Consensus       352 ~~f~~~-------~v~~~~np~~aVA~Gaa~~a~~  379 (554)
T 1yuw_A          352 DFFNGK-------ELNKSINPDEAVAYGAAVQAAI  379 (554)
T ss_dssp             HHTTTC-------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred             HHcCCC-------ccccCCCchhHHHHHHHHHHHH
Confidence            877432       3345678999999999999863

>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*

Probab=99.83  E-value=8e-21  Score=192.02  Aligned_cols=214  Identities=10%  Similarity=0.166  Sum_probs=147.5

Q ss_pred             CCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC------------ceEEEEeCCCCceEEEEee-
Q 017089          102 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVSHTVPIY-  168 (377)
Q Consensus       102 ~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~~~lVVDiG~~~t~i~~v~-  168 (377)
                      -..+++++|..++..+|+.+.+.+ +.+|++.+.++++|+||++++|.            .+.+|+|+|+++++|+.+. 
T Consensus       138 v~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~  216 (675)
T 3d2f_A          138 ITDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAF  216 (675)
T ss_dssp             CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEE
T ss_pred             cceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEe
Confidence            357999999999999999988876 88999999999999999987642            4689999999999999886 


Q ss_pred             -CCcc-cccceEEecccHHHHHHHHHHHHHH-----cCCCccchh-----HHHHHHHHHHhccceecCHHHHHHHhccCC
Q 017089          169 -EGYA-LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSS  236 (377)
Q Consensus       169 -~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~  236 (377)
                       +|.. +.......++||.++++.|.+++..     .+.++....     -...++++|+.++...              
T Consensus       217 ~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~--------------  282 (675)
T 3d2f_A          217 KKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT--------------  282 (675)
T ss_dssp             ETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS--------------
T ss_pred             cCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC--------------
Confidence             6654 2223335799999999999998853     233332110     1345677777665321              


Q ss_pred             CcceEEEcC---CCc--EEeeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcC
Q 017089          237 AVEKSYELP---DGQ--VITIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPG  310 (377)
Q Consensus       237 ~~~~~~~~p---~~~--~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~g  310 (377)
                        ...+.++   ++.  .+.++.+.|. +.+.++..         +.+.|.++|.....  ...-++.|+||||+|++|+
T Consensus       283 --~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~---------i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~  349 (675)
T 3d2f_A          283 --NAPFSVESVMNDVDVSSQLSREELEELVKPLLER---------VTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPT  349 (675)
T ss_dssp             --EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTT---------TTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHH
T ss_pred             --ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHhCC--ChhhCcEEEEECCCccChH
Confidence              1122222   122  2233333321 22223322         66667777765421  1234689999999999999


Q ss_pred             hHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          311 IADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       311 l~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.++|++.+..        .+..+.+|..++..||+++|..
T Consensus       350 v~~~l~~~fg~--------~~~~~~nPdeaVA~GAa~~a~~  382 (675)
T 3d2f_A          350 LKQSISEAFGK--------PLSTTLNQDEAIAKGAAFICAI  382 (675)
T ss_dssp             HHHHHHHHHTS--------CEECCSCTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCC--------CccccCCcchHHHHHHHHHHHH
Confidence            99999988831        3445678999999999999863

>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}

Probab=99.82  E-value=1.1e-20  Score=181.47  Aligned_cols=238  Identities=13%  Similarity=0.148  Sum_probs=150.4

Q ss_pred             HHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCc--------
Q 017089           82 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------  150 (377)
Q Consensus        82 ~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~--------  150 (377)
                      +....+++++..   ..++  .....+++++|..++..+|+.+.+.+ +.+|+..+.++++|.||+++++..        
T Consensus       129 ev~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~  205 (409)
T 4gni_A          129 EIATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDK  205 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCE
T ss_pred             HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCC
Confidence            344555555532   2232  34467999999999999999887776 889999999999999999998754        


Q ss_pred             eEEEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHHHHHHHc-----C--CCccchh-----HHHHHHHHH
Q 017089          151 TGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----G--YSFTTTA-----EREIVRDMK  215 (377)
Q Consensus       151 ~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~--~~~~~~~-----~~~~~~~ik  215 (377)
                      +.+|+|+|+++|+++.+.  +|.. +.......++||.++++.|.+++..+     +  .+.....     -...++.+|
T Consensus       206 ~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K  285 (409)
T 4gni_A          206 IIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTK  285 (409)
T ss_dssp             EEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHH
T ss_pred             EEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHH
Confidence            589999999999999863  3321 11122347999999999999888643     1  1111100     012455666


Q ss_pred             HhccceecCHHHHHHHhccCCCcceEEEc---CCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHH
Q 017089          216 EKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIR  292 (377)
Q Consensus       216 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~  292 (377)
                      +.++..                ....+.+   .++....+.-.|..+ |-+++|-     ...+.+.|.+.|.+..  ..
T Consensus       286 ~~ls~~----------------~~~~i~i~~~~~~~~~~~~itr~~~-~~~~~~~-----~~~i~~~i~~~l~~~~--~~  341 (409)
T 4gni_A          286 RALSRS----------------TNASFSVESLIDGLDFASTINRLRY-ETIARTV-----FEGFNRLVESAVKKAG--LD  341 (409)
T ss_dssp             HHHHHS----------------SEEEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHHHHHHHHHHHHTT--CC
T ss_pred             HhCCCC----------------CceEEEeecccCCcceEEEeeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcC--CC
Confidence            554421                0111222   123322222122222 2233331     1114555555555442  22


Q ss_pred             HHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEE------ECCCCCccccchhhhhhhccc
Q 017089          293 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKV------VAPPERKYSVWIGGSILASLS  352 (377)
Q Consensus       293 ~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v------~~~~~~~~~~w~Gasi~a~l~  352 (377)
                      ...++.|+||||+|++|++.++|++.+..      .++|      ....+|+.++-.||+++|...
T Consensus       342 ~~~i~~V~LvGG~s~~p~v~~~l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~  401 (409)
T 4gni_A          342 PLDVDEVIMSGGTSNTPRIAANFRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLI  401 (409)
T ss_dssp             GGGCCEEEEESGGGGCHHHHHHHHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred             HHHCCEEEEECCccccHHHHHHHHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence            34568899999999999999999877732      2355      344689999999999998874

>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D

Probab=99.78  E-value=1.7e-19  Score=180.77  Aligned_cols=301  Identities=17%  Similarity=0.197  Sum_probs=180.4

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceeEecCCCCccccCCCcceeeccchhccc--C----cceeec--
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--G----ILTLKY--   71 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~--------~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~----~~~~~~--   71 (377)
                      .+|.||+||+++.+++..+..|.        ..+||+++...+         ...++|.+|....  +    .+.+++  
T Consensus         3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~ti~~~Krll   73 (605)
T 4b9q_A            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GCTLVGQPAKRQAVTNPQNTLFAIKRLI   73 (605)
T ss_dssp             CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTT---------SCEEESHHHHHTTTTCGGGEECCGGGTT
T ss_pred             cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCC---------CcEEecHHHHHHHHhCCCcEehhhHHhh
Confidence            57999999999999997544332        344666655322         2355676654320  0    011111  


Q ss_pred             ----------------cc-----c--------CCc-cCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH
Q 017089           72 ----------------PI-----E--------HGI-VSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR  118 (377)
Q Consensus        72 ----------------p~-----~--------~g~-i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~  118 (377)
                                      |+     .        .|. +...+....+++++..   ..|+.  .-..+++++|..++..+|
T Consensus        74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr  151 (605)
T 4b9q_A           74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQR  151 (605)
T ss_dssp             TCBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHH
T ss_pred             CCCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHH
Confidence                            11     0        111 2223444555555531   23332  345799999999999999


Q ss_pred             HHHHhhccccCCCCeEEeeecccccccccCC------ceEEEEeCCCCceEEEEeeCCc----c---cccceEEecccHH
Q 017089          119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEGY----A---LPHAILRLDLAGR  185 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~i~~v~~g~----~---~~~~~~~~~~GG~  185 (377)
                      +.+.+.+ +.+|++.+.++++|.||++++|.      .+.+|+|+|+++++++.+.-+.    .   +.......++||.
T Consensus       152 ~a~~~Aa-~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~  230 (605)
T 4b9q_A          152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGE  230 (605)
T ss_dssp             HHHHHHH-HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHH
T ss_pred             HHHHHHH-HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChH
Confidence            9877776 88999999999999999998863      4679999999999999886433    1   1112234688999


Q ss_pred             HHHHHHHHHHHHc-----CCCccchhH-----HHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCC--C-cE--E
Q 017089          186 DLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QV--I  250 (377)
Q Consensus       186 ~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~--~-~~--i  250 (377)
                      ++++.+.+++..+     +.+......     ...+++.|+.++....            ......+...+  | ..  +
T Consensus       231 d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~------------~~i~~~~~~~~~~g~~~~~~  298 (605)
T 4b9q_A          231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ------------TDVNLPYITADATGPKHMNI  298 (605)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSE------------EEEEEEEEEECSSSEEEEEE
T ss_pred             HHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCC------------eEEEEeeeccCCCCCeeEEE
Confidence            9999999888642     333221111     3446666666553210            00011111111  1 11  2


Q ss_pred             eeCCcccc-ccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceE
Q 017089          251 TIGAERFR-CPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKI  329 (377)
Q Consensus       251 ~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v  329 (377)
                      .++...+. +.+.++..         +.+.|.+++.....  ...-++.|+||||+|++|++.+++++.+..        
T Consensus       299 ~itr~~~e~l~~~~~~~---------i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~~~l~~~fg~--------  359 (605)
T 4b9q_A          299 KVTRAKLESLVEDLVNR---------SIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------  359 (605)
T ss_dssp             EEEHHHHHHHHHHHHHH---------TTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------
T ss_pred             EEeHHHHHHHHHHHHHH---------HHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHHHHHHHHhcc--------
Confidence            22222221 11112211         44445555554321  223457899999999999999999988832        


Q ss_pred             EEECCCCCccccchhhhhhhcc
Q 017089          330 KVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       330 ~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+..+.+|+.++-.||+++|..
T Consensus       360 ~~~~~~nPdeaVA~GAai~a~~  381 (605)
T 4b9q_A          360 EPRKDVNPDEAVAIGAAVQGGV  381 (605)
T ss_dssp             CCCSSSCTTTHHHHHHHHHHHH
T ss_pred             CcCCCcChhHHHHHhHHHHHHH
Confidence            2334568899999999999874

>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}

Probab=99.74  E-value=1e-17  Score=159.00  Aligned_cols=172  Identities=16%  Similarity=0.219  Sum_probs=109.1

Q ss_pred             HHHHHhhccccCCCCeEEeeecccccccccC-------CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHH
Q 017089          118 REKMTQIMFETFNTPAMYVAIQAVLSLYASG-------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDA  190 (377)
Q Consensus       118 ~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-------~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~  190 (377)
                      .+.+.+.+ +.+|++...+..+|+|++.+++       ..+.+|||+|+++|+++.+.+|.++  .....++||.++++.
T Consensus       153 v~~~~~~~-~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~--~~~~~~~GG~~i~~~  229 (377)
T 2ych_A          153 VAGVLEAL-RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL--AVRVLTLSGKDFTEA  229 (377)
T ss_dssp             HHHHHHHH-HHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHH
T ss_pred             HHHHHHHH-HHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE--EEEeeechHHHHHHH
Confidence            35555544 8899999999999999998874       2457999999999999999999887  457789999999999


Q ss_pred             HHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCC
Q 017089          191 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIG  270 (377)
Q Consensus       191 l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~  270 (377)
                      +.+.+   +.      +.+.++++|+++++...+..++.          ..+.+++ ..+.++.+.  +.|++ +|    
T Consensus       230 i~~~~---~~------~~~~aE~~K~~~~~~~~~~~~~~----------~~i~~~~-~~~~i~~~~--~~~~i-~~----  282 (377)
T 2ych_A          230 IARSF---NL------DLLAAEEVKRTYGMATLPTEDEE----------LLLDFDA-ERERYSPGR--IYDAI-RP----  282 (377)
T ss_dssp             HHHHT---TC------CHHHHHHHHHHTC------------------------------------C--HHHHH-HH----
T ss_pred             HHHHh---CC------CHHHHHHHHhhcccccccccccc----------ccccccc-ccccCCHHH--HHHHH-HH----
Confidence            98743   22      24679999999987643211110          0111221 112222111  11111 11    


Q ss_pred             CcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHH
Q 017089          271 MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT  320 (377)
Q Consensus       271 ~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~  320 (377)
                       ....+.+.|.+++..++...+....++|+||||+|++||+.+++++.+.
T Consensus       283 -~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~  331 (377)
T 2ych_A          283 -VLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG  331 (377)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred             -HHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence             0112555566666555444556678899999999999999999999994

>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*

Probab=99.72  E-value=2.4e-18  Score=161.10  Aligned_cols=177  Identities=15%  Similarity=0.127  Sum_probs=125.6

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcccc------C--------CCcceeeccchhcccCcceeecccc
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG------M--------GQKDAYVGDEAQSKRGILTLKYPIE   74 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~------~--------~~~~~~vg~~~~~~~~~~~~~~p~~   74 (377)
                      .+.||+|+.++|+-. ++ .-.+.+||.++.........+      .        .+..+.||++|.         +|++
T Consensus        23 ~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l~   91 (346)
T 2fsj_A           23 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQG   91 (346)
T ss_dssp             EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCSS
T ss_pred             EEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------cccC
Confidence            689999999999853 32 234567888876554321000      0        124556776653         8999


Q ss_pred             CCccCCHHHHHHHHHHhccccc-ccCCCCCcEE--EeeCCCCCHHhHHHHHhhcccc-------------CCCCeEEeee
Q 017089           75 HGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVL--LTEAPLNPKANREKMTQIMFET-------------FNTPAMYVAI  138 (377)
Q Consensus        75 ~g~i~d~~~~~~~~~~~~~~~L-~~~~~~~~vv--l~~~~~~~~~~~~~l~~~lfe~-------------~~~~~v~~~~  138 (377)
                      .+.+.+ +..+.++.+.+.+.. ........++  ++.|......+|+.+.+.+...             +.+..+.+++
T Consensus        92 ~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~  170 (346)
T 2fsj_A           92 DGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRP  170 (346)
T ss_dssp             TTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEE
T ss_pred             CCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEc
Confidence            999988 666666666664332 1112335689  9999988888888888876442             1256799999


Q ss_pred             ccccccccc--C-----C-ceEEEEeCCCCceEEEEee--CCcccccceEEecccHHHHHHHHHHHHHH
Q 017089          139 QAVLSLYAS--G-----R-TTGIVLDSGDGVSHTVPIY--EGYALPHAILRLDLAGRDLTDALMKILTE  197 (377)
Q Consensus       139 ~~~~a~~~~--g-----~-~~~lVVDiG~~~t~i~~v~--~g~~~~~~~~~~~~GG~~l~~~l~~~l~~  197 (377)
                      +|++|++++  +     . .+.+|||+|+++|+++.+.  +|.++.......++||+++++.+.+.+++
T Consensus       171 Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~  239 (346)
T 2fsj_A          171 QGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAK  239 (346)
T ss_dssp             TTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHH
Confidence            999999974  2     1 4569999999999999998  77766554678899999999999887754

>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*

Probab=99.67  E-value=3.4e-16  Score=149.82  Aligned_cols=200  Identities=11%  Similarity=0.136  Sum_probs=131.4

Q ss_pred             HHhHHHHHhhccccCCCCeEEeeecccccccccCC-----ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHH
Q 017089          115 KANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD  189 (377)
Q Consensus       115 ~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~  189 (377)
                      +...+.+.+.+ +..|+....++.+|+||++++..     .+.+|||+|+++|+++.+.+|.+.  .....++||+++|+
T Consensus       167 ~~~v~n~~~~~-~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~--~~~~i~~GG~~it~  243 (419)
T 4a2a_A          167 LKVYEMFYNFL-QDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVIK  243 (419)
T ss_dssp             HHHHHHHHHHH-HTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE--EEEEESCCHHHHHH
T ss_pred             HHHHHHHHHHH-HHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE--EEEecccHHHHHHH
Confidence            44555666555 88999999999999999988765     368999999999999999999887  55678999999999


Q ss_pred             HHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCC--C-cEEeeCCccc-cccccCCC
Q 017089          190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QVITIGAERF-RCPEVLFQ  265 (377)
Q Consensus       190 ~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~--~-~~i~i~~~~~-~~~E~lf~  265 (377)
                      .+...+.         ...+.+|++|.+++....+.           .....+.+|.  + ....++...+ .+.+..++
T Consensus       244 dIa~~l~---------~~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~ve  303 (419)
T 4a2a_A          244 DVSAVLD---------TSFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLR  303 (419)
T ss_dssp             HHHHHHT---------CCHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHC---------CCHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHHH
Confidence            9998762         14577999999987643211           0111222221  1 1122221111 11111111


Q ss_pred             CccCCCcCCChHHHHHHHHhcCCH----HHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEEC-----C--
Q 017089          266 PSMIGMEAAGIHETTYNSIMKCDV----DIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVA-----P--  334 (377)
Q Consensus       266 p~~~~~~~~~l~~~I~~~i~~~~~----~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~-----~--  334 (377)
                               .+.+.|.+.|+....    .......+.|+||||+|++||+.+.+++.+.      .++++..     |  
T Consensus       304 ---------ei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g------~~vri~~~~~~~p~~  368 (419)
T 4a2a_A          304 ---------EIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK------SPVRTGCYANSDRPS  368 (419)
T ss_dssp             ---------HHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT------SCEEECCGGGSSSCC
T ss_pred             ---------HHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC------CCeEEEecCCCCchh
Confidence                     145555666655432    1145677889999999999999999999983      2456655     3  


Q ss_pred             --------CCCccccchhhhhhhccc
Q 017089          335 --------PERKYSVWIGGSILASLS  352 (377)
Q Consensus       335 --------~~~~~~~w~Gasi~a~l~  352 (377)
                              .+|.|+.-.|-.+++...
T Consensus       369 ~~~~~~~~~~P~~~t~~Gl~~~~~~~  394 (419)
T 4a2a_A          369 IINADEVANDPSFAAAFGNVFAVSEN  394 (419)
T ss_dssp             CBTCHHHHTCGGGHHHHHTTCC----
T ss_pred             ccCcccccCCchHHHHHHHHHHHhhc
Confidence                    367888888888877553

>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A

Probab=99.55  E-value=5.4e-15  Score=137.00  Aligned_cols=288  Identities=11%  Similarity=0.090  Sum_probs=152.2

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCcc--------ccCCCcceeeccchhcccCcceeeccccCCccCC
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM--------VGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN   80 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~--------~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d   80 (377)
                      .+.||+|++++|+.+..++.....+|+...........        ...++..+.+|..+..      .......+....
T Consensus         2 ~igiD~G~sntK~~~~~~~g~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~g~~y~vg~~a~~------~~~t~~~~~~~~   75 (320)
T 2zgy_A            2 LVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPD------AVVTTNIAWQYS   75 (320)
T ss_dssp             EEEEEECSSEEEEEEECSSSCEEEEEEECCEESSCCCCSSSCCCCEEEETTEEEEECTTCBS------CCCSCCSGGGGS
T ss_pred             eEEEecCCccceEEEecCCCEEEEEecCceeecccccccCCCceeEEEECCEEEEEcccccc------cccCcCCCccch
Confidence            58999999999998854443333343322111111000        0112234455544311      111222222223


Q ss_pred             HHHHHHHHHHhcccccccCCCCCcEEEeeCCC-CCH-------H-hHHH---HHhhc----cccCCCCeEEeeecccccc
Q 017089           81 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL-NPK-------A-NREK---MTQIM----FETFNTPAMYVAIQAVLSL  144 (377)
Q Consensus        81 ~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~-~~~-------~-~~~~---l~~~l----fe~~~~~~v~~~~~~~~a~  144 (377)
                      ...+..+. +.+.+ .+....+..+++..|.. +..       . ..+.   +++.+    .+.+++..+.++++|++|+
T Consensus        76 ~~~l~~i~-~aL~~-~~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~  153 (320)
T 2zgy_A           76 DVNVVAVH-HALLT-SGLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAG  153 (320)
T ss_dssp             HHHHHHHH-HHHHH-HSCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHH
T ss_pred             HHHHHHHH-HHHHH-cCCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHH
Confidence            33333333 23211 22222234578888855 221       1 1122   22222    3456678999999999999


Q ss_pred             cccC-----CceEEEEeCCCCceEEEEeeCCcc-cccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHH-HHh
Q 017089          145 YASG-----RTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDM-KEK  217 (377)
Q Consensus       145 ~~~g-----~~~~lVVDiG~~~t~i~~v~~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~i-k~~  217 (377)
                      ++++     ..+.+|||||+++|+++.+.+|.+ +.......++||.++++.+.+.+.+++.++    ....++++ |.+
T Consensus       154 ~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~i----~~~~ae~~lk~~  229 (320)
T 2zgy_A          154 YEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTKG----SSYLADDIIIHR  229 (320)
T ss_dssp             HHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSBGG----GHHHHHHHHHTT
T ss_pred             HhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCCCC----CHHHHHHHHHHh
Confidence            8763     357899999999999999999876 433456779999999999999986543222    33456666 554


Q ss_pred             ccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhc
Q 017089          218 LAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG  297 (377)
Q Consensus       218 ~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~  297 (377)
                      ....   +...  ..          ..|.        ......+. +.+     ....+.+.|.+.+++.      ...+
T Consensus       230 ~~~~---~~~~--~i----------~~~~--------~~~~~~~~-i~~-----~~~~~~~~i~~~i~~~------~~~~  274 (320)
T 2zgy_A          230 KDNN---YLKQ--RI----------NDEN--------KISIVTEA-MNE-----ALRKLEQRVLNTLNEF------SGYT  274 (320)
T ss_dssp             TCHH---HHHH--HS----------SSSC--------THHHHHHH-HHH-----HHHHHHHHHHHHHTTC------CCCC
T ss_pred             hhhh---cccc--ee----------cCch--------hhHHHHHH-HHH-----HHHHHHHHHHHHHHhh------cCCC
Confidence            2100   0000  00          0000        00000000 000     0001333444444432      2347


Q ss_pred             CcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017089          298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       298 nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      .|+||||+|.+  +.+.++    +.++.. .-++..+++|+++.-+|+.++++
T Consensus       275 ~vvl~GGga~l--l~~~l~----~~~~~~-~~~~~~~~~P~~a~A~G~~~~~~  320 (320)
T 2zgy_A          275 HVMVIGGGAEL--ICDAVK----KHTQIR-DERFFKTNNSQYDLVNGMYLIGN  320 (320)
T ss_dssp             EEEEESTTHHH--HHHHHH----HTSCCC-GGGEECCSCGGGHHHHHHHHHHC
T ss_pred             eEEEECChHHH--HHHHHH----HHhCCC-CCceeeCCCcHHHHHHHHHHhcC
Confidence            89999999987  554444    444321 00345577899999999998864

>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}

Probab=99.46  E-value=1.2e-14  Score=134.85  Aligned_cols=288  Identities=14%  Similarity=0.123  Sum_probs=161.6

Q ss_pred             CCCCCCcEEEeCCCCceEEeee--C---CCCCCCCCCceeEecCCC-------CccccCCCcceeeccchhcccCcceee
Q 017089            3 DTEDIQPLVCDNGTGMVKAGFA--G---DDAPRAVFPSIVGRPRHT-------GVMVGMGQKDAYVGDEAQSKRGILTLK   70 (377)
Q Consensus         3 ~~~~~~~vviD~Gs~~~k~G~~--~---~~~P~~~~p~~~~~~~~~-------~~~~~~~~~~~~vg~~~~~~~~~~~~~   70 (377)
                      .+.+.-.|.||+|-.++|+-..  +   ++.-+..|||.++...+.       ...+..++..++||+.+...       
T Consensus         3 ~~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~-------   75 (329)
T 4apw_A            3 NITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED-------   75 (329)
T ss_dssp             --CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC-------
T ss_pred             CccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc-------
Confidence            3445567899999999998653  2   122335688887754432       11233456778888865321       


Q ss_pred             ccccCCccCCHHHHHHHHHHhcccccccC-CCCCcEEEeeCCCCCH--HhHHHHHhhcccc-------------CCCCeE
Q 017089           71 YPIEHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPVLLTEAPLNPK--ANREKMTQIMFET-------------FNTPAM  134 (377)
Q Consensus        71 ~p~~~g~i~d~~~~~~~~~~~~~~~L~~~-~~~~~vvl~~~~~~~~--~~~~~l~~~lfe~-------------~~~~~v  134 (377)
                       -+....  +-+..+.++..++-..+... ...-.+++..|.....  .+++.+.+.+-..             +.+..+
T Consensus        76 -~~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v  152 (329)
T 4apw_A           76 -SSETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDI  152 (329)
T ss_dssp             -SGGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEE
T ss_pred             -cccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEE
Confidence             011112  11234444445542334322 1223466666654432  2455555554321             224578


Q ss_pred             Eeeeccccccccc----CCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHH-c-CCCccchhHH
Q 017089          135 YVAIQAVLSLYAS----GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE-R-GYSFTTTAER  208 (377)
Q Consensus       135 ~~~~~~~~a~~~~----g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~-~-~~~~~~~~~~  208 (377)
                      .+.|++..|.+..    ...+.+|||||+++|+++.+.+|.++.......++||.++++.+.+.+++ + +..+..    
T Consensus       153 ~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~~----  228 (329)
T 4apw_A          153 TIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTDLNNGNLITN----  228 (329)
T ss_dssp             EEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTTS----
T ss_pred             EEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHhhccCCCCCH----
Confidence            9999999998875    23578999999999999999999988766678999999999999988754 2 222211    


Q ss_pred             HHHHHHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCC
Q 017089          209 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCD  288 (377)
Q Consensus       209 ~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~  288 (377)
                      ..++++|+. +.+..                      .+....+.  ...+.+.+          ..+.+.|.+.+.+. 
T Consensus       229 ~~~e~i~~~-g~~~~----------------------g~~~~~~~--~~~i~~~~----------~e~~~~I~~~i~~~-  272 (329)
T 4apw_A          229 EQAESALNN-GYMKK----------------------GGEIDTES--STVIKKVK----------EKFLKDAIKLIEKR-  272 (329)
T ss_dssp             BTTTTCSSS-CSSCE----------------------ECTTCCST--THHHHHHH----------HHHHHHHHHHHHHH-
T ss_pred             HHHHHHHhc-CCccc----------------------CCcchhHH--HHHHHHHH----------HHHHHHHHHHHHHc-
Confidence            123333332 11000                      00000000  00000000          01233334444322 


Q ss_pred             HHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       289 ~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                       ...+.+.+.|+||||+|.+  +.+.+++++    +.    ++...++|.++.-.|+-.++..
T Consensus       273 -~~~~~~~~~IvltGGGA~l--~~~~l~~~~----~~----~v~v~~~P~~a~a~G~~~~~~~  324 (329)
T 4apw_A          273 -GFKLDQLDSLIFIGGTTQK--LKEQISKTY----PN----NSIITNNSQWTTCEGLYKVAVA  324 (329)
T ss_dssp             -TCCTTSCSEEEEESTTHHH--HHHHHHHHS----TT----CEECCSSGGGHHHHHHHHHHHH
T ss_pred             -CCCHHHccEEEEECChHHH--HHHHHHHHc----CC----CCEecCCChhhHHHHHHHHHhh
Confidence             0112346889999999999  445555554    32    2445678999999999887654

>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}

Probab=99.42  E-value=7.4e-14  Score=130.75  Aligned_cols=185  Identities=13%  Similarity=0.156  Sum_probs=118.2

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCc---------------cccCCCcc-eeeccchhcccCcceeec
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------------MVGMGQKD-AYVGDEAQSKRGILTLKY   71 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~---------------~~~~~~~~-~~vg~~~~~~~~~~~~~~   71 (377)
                      -.|.||+|-.++|+ ..++  -.+.+||.++...+...               .+..++.. ++||+.+......  ..+
T Consensus         5 ~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~--~~~   79 (355)
T 3js6_A            5 YVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT--GKD   79 (355)
T ss_dssp             EEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC--CEE
T ss_pred             EEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc--ccc
Confidence            47899999999996 4443  24678998876433211               11123445 8899877543111  112


Q ss_pred             cc-cCCccCCHHHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhH-HHHHhhcccc-----------CCCCeEE
Q 017089           72 PI-EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANR-EKMTQIMFET-----------FNTPAMY  135 (377)
Q Consensus        72 p~-~~g~i~d~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~-~~l~~~lfe~-----------~~~~~v~  135 (377)
                      .+ ......+-+ .+.++..++.   ..+.....+-.+++..|......++ +.+.+.+...           +.+..|.
T Consensus        80 ~~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~  158 (355)
T 3js6_A           80 TASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVK  158 (355)
T ss_dssp             CCCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEE
T ss_pred             ccccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEE
Confidence            22 233444432 2222222221   1111111123577778877666665 4677666432           2236899


Q ss_pred             eeecccccccccC-----------CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHc
Q 017089          136 VAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER  198 (377)
Q Consensus       136 ~~~~~~~a~~~~g-----------~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~  198 (377)
                      ++++|.+|+++++           ..+.+|||||+.+|+++.+.+|.++......+++||..+++.+.+.+.++
T Consensus       159 v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~  232 (355)
T 3js6_A          159 IVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK  232 (355)
T ss_dssp             EEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred             EEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence            9999999999874           35679999999999999999998887777789999999999999998654

>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A

Probab=98.90  E-value=1.9e-09  Score=102.79  Aligned_cols=180  Identities=12%  Similarity=0.113  Sum_probs=106.7

Q ss_pred             ecccccccccC-----CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHH
Q 017089          138 IQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR  212 (377)
Q Consensus       138 ~~~~~a~~~~g-----~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~  212 (377)
                      -+|.||.+++=     ....++||+|+++|+++.+.+|..+  +...+++||+++|..+..-|.        ..+...+|
T Consensus       390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~gG~~VT~DIA~~Lg--------t~d~~~AE  459 (610)
T 2d0o_A          390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMIIARELG--------LEDRYLAE  459 (610)
T ss_dssp             EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHHHHHHHT--------CCCHHHHH
T ss_pred             ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence            67777776652     2468999999999999999999888  667799999999999998882        12478899


Q ss_pred             HHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEee--CCc-cccccc-cCCCCcc-CCCcCCC--hHH--HHHHH
Q 017089          213 DMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPSM-IGMEAAG--IHE--TTYNS  283 (377)
Q Consensus       213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i--~~~-~~~~~E-~lf~p~~-~~~~~~~--l~~--~I~~~  283 (377)
                      +||. |+.+..+.           .+   ....+...+++  ... ...++. .+..|+. ... .+.  +.+  ++.+.
T Consensus       460 rIK~-YG~A~ve~-----------lf---~~~dede~Iev~~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEElelVR~~  523 (610)
T 2d0o_A          460 EIKK-YPLAKVES-----------LF---HLRHEDGSVQFFSTPLPPAVFARVCVVKADELVPL-PGDLALEKVRAIRRS  523 (610)
T ss_dssp             HHHH-SCEEEECS-----------SS---EEEETTSCEEECSSCCCGGGTTCEEEECSSCEEEC-CTTCCHHHHHHHHHH
T ss_pred             Hhcc-cCceeecc-----------cc---cccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHHHHHHHHH
Confidence            9999 88764331           00   00001111222  000 000111 0000010 011 111  333  33333


Q ss_pred             HhcC---CHHHHH----------HhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC-----CCCccccchhh
Q 017089          284 IMKC---DVDIRK----------DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP-----PERKYSVWIGG  345 (377)
Q Consensus       284 i~~~---~~~~~~----------~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~-----~~~~~~~w~Ga  345 (377)
                      +++.   ...+|.          ..+..||||||+|+++|+.+-.++.|..+     .+++-.+     ..|.|++-.|-
T Consensus       524 ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y-----~VRiGrP~~~gv~gP~fAtAvGL  598 (610)
T 2d0o_A          524 AKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY-----RLVAGRGNIRGSEGPRNAVATGL  598 (610)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS-----SCEEEECCGGGTSTTSCHHHHHH
T ss_pred             HhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCCcHHHHHHH
Confidence            2111   001111          11256999999999999999999888652     4555444     36788888886


Q ss_pred             hhh
Q 017089          346 SIL  348 (377)
Q Consensus       346 si~  348 (377)
                      .+|
T Consensus       599 lly  601 (610)
T 2d0o_A          599 ILS  601 (610)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6

Probab=98.88  E-value=2.3e-09  Score=102.46  Aligned_cols=181  Identities=12%  Similarity=0.119  Sum_probs=105.7

Q ss_pred             ecccccccccC-----CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHH
Q 017089          138 IQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR  212 (377)
Q Consensus       138 ~~~~~a~~~~g-----~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~  212 (377)
                      .+|.||.+++=     ....++||+|+++|+++.+.+|..+  +...+++||+++|..+..-|.        ..+...+|
T Consensus       392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~Lg--------~~d~~~AE  461 (607)
T 1nbw_A          392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTELG--------LEDLSLAE  461 (607)
T ss_dssp             CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHHT--------CSCHHHHH
T ss_pred             ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence            56666666552     2468999999999999999999888  667799999999999998882        22478899


Q ss_pred             HHHHhccceecCHHHHHHHhccCCCcceEEEcCCCcEEee--CCc-cccccc-cCCCCcc-CCC-cCCChHH--HHHHHH
Q 017089          213 DMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPSM-IGM-EAAGIHE--TTYNSI  284 (377)
Q Consensus       213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~i--~~~-~~~~~E-~lf~p~~-~~~-~~~~l~~--~I~~~i  284 (377)
                      ++|. |+.+..+.           .+   ....+...+++  ... ...++. .+..|+. ... .-.++.+  ++.+.+
T Consensus       462 rIK~-YG~A~~e~-----------lf---~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L~~I~~R~~vEElelVR~~a  526 (607)
T 1nbw_A          462 AIKK-YPLAKVES-----------LF---SIRHENGAVEFFREALSPAVFAKVVYIKEGELVPIDNASPLEKIRLVRRQA  526 (607)
T ss_dssp             HHHH-SCEEEECS-----------SS---EEEETTSCEEECSSCCCGGGTTCEEEEETTEEEEECCSSCHHHHHHHHHHH
T ss_pred             Hhcc-cCceeecc-----------cc---cccCCCCeEEEecCCCCcceeeeeecccccceeeeCCCcchHHHHHHHHHH
Confidence            9999 88764331           00   00001111222  000 000101 0000000 001 0011333  333332


Q ss_pred             hcC---CHHHHH----------HhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECC-----CCCccccchhhh
Q 017089          285 MKC---DVDIRK----------DLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAP-----PERKYSVWIGGS  346 (377)
Q Consensus       285 ~~~---~~~~~~----------~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~-----~~~~~~~w~Gas  346 (377)
                      ++.   ...+|.          ..+..||||||+|+++|+.+-.++.|..+     .+++-.+     ..|.|++-.|-.
T Consensus       527 k~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGLl  601 (607)
T 1nbw_A          527 KEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGLL  601 (607)
T ss_dssp             HHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHHH
T ss_pred             hhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHHH
Confidence            111   011111          11256999999999999999999999763     3455443     367888888865


Q ss_pred             hh
Q 017089          347 IL  348 (377)
Q Consensus       347 i~  348 (377)
                      +|
T Consensus       602 ly  603 (607)
T 1nbw_A          602 LA  603 (607)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A

Probab=98.51  E-value=5e-08  Score=87.98  Aligned_cols=52  Identities=25%  Similarity=0.413  Sum_probs=42.5

Q ss_pred             HHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          292 RKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       292 ~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +....+.|+++||.|+.|+++++|++.+        ..++..|++|++..-.||+++|.-
T Consensus       203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~--------g~~~~~p~~p~~~~A~GAAl~A~~  254 (276)
T 4ehu_A          203 RIGVQRNVVMVGGVARNSGIVRAMAREI--------NTEIIVPDIPQLTGALGAALYAFD  254 (276)
T ss_dssp             HHCCCSSEEEESGGGGCHHHHHHHHHHH--------TSCEECCSSGGGHHHHHHHHHHHH
T ss_pred             hcccCCeEEEecCccchHHHHHHHHHHH--------CCCeeeCCCcchHHHHHHHHHHHH
Confidence            3345578999999999999999998877        235677889999988999999853

>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5

Probab=97.54  E-value=0.00015  Score=64.87  Aligned_cols=47  Identities=17%  Similarity=0.388  Sum_probs=38.9

Q ss_pred             cCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          297 GNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       297 ~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.|+++||.++-|++.+.+.+.|..        +|..++++++..-.||+++|..
T Consensus       210 ~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~  256 (270)
T 1hux_A          210 KDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK  256 (270)
T ss_dssp             SSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred             CeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence            6799999999999999999988832        4555667788889999999865

>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*

Probab=96.58  E-value=0.0022  Score=58.44  Aligned_cols=75  Identities=16%  Similarity=0.105  Sum_probs=53.6

Q ss_pred             CHHhHHHHHhhccccCCCCeEEeeeccccccc-------ccC-CceEEEEeCCCCceEEEEeeCCcccccceEEecccHH
Q 017089          114 PKANREKMTQIMFETFNTPAMYVAIQAVLSLY-------ASG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR  185 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~-------~~g-~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~  185 (377)
                      ...+++.+++.+.+..|++ +.++...-=|.|       +.+ ..+++|||||+++|.++-+.++.+.  ....+|+|+-
T Consensus        95 ~A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v  171 (315)
T 1t6c_A           95 RAKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIV  171 (315)
T ss_dssp             TSTTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHH
T ss_pred             cCcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHH
Confidence            3456677777777778876 344443222222       123 5679999999999999999888876  5678999998


Q ss_pred             HHHHHH
Q 017089          186 DLTDAL  191 (377)
Q Consensus       186 ~l~~~l  191 (377)
                      .+++.+
T Consensus       172 ~l~e~~  177 (315)
T 1t6c_A          172 NLTETF  177 (315)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            888776

>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14

Probab=96.33  E-value=0.02  Score=51.19  Aligned_cols=51  Identities=18%  Similarity=0.011  Sum_probs=41.3

Q ss_pred             hhcCcccccC-CcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017089          295 LYGNIVLSGG-STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       295 l~~nIil~GG-~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      -+++|+++|| .+..|++.++|.+.+.-.     ..++.-++++++..-+||+++++
T Consensus       236 ~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~~  287 (287)
T 2ews_A          236 KTENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLEK  287 (287)
T ss_dssp             TCCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTCC
T ss_pred             CCCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhCC
Confidence            3457999999 999999999999766442     34677788899999999998763

>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10

Probab=96.19  E-value=0.011  Score=53.17  Aligned_cols=51  Identities=12%  Similarity=0.096  Sum_probs=40.0

Q ss_pred             HHhhccccCCCCeEEeeeccccccccc-----CCceEEEEeCCCCceEEEEeeCCcccc
Q 017089          121 MTQIMFETFNTPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~i~~v~~g~~~~  174 (377)
                      +.+.+ +.+++| |.+.++.-+++++.     +..+.++|-+|.+ +-...|.+|+++.
T Consensus        87 l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~  142 (292)
T 2gup_A           87 WYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHR  142 (292)
T ss_dssp             HHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEEC
T ss_pred             HHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEe
Confidence            55666 778887 78999999988873     5678999999976 6677778887654

>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}

Probab=96.04  E-value=0.0021  Score=59.29  Aligned_cols=75  Identities=17%  Similarity=0.168  Sum_probs=49.1

Q ss_pred             HhHHHHHhhccccCCCCeEEeee---cccccccc------c--CCceEEEEeCCCCceEEEEeeC--Cccc--ccceEEe
Q 017089          116 ANREKMTQIMFETFNTPAMYVAI---QAVLSLYA------S--GRTTGIVLDSGDGVSHTVPIYE--GYAL--PHAILRL  180 (377)
Q Consensus       116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~------~--g~~~~lVVDiG~~~t~i~~v~~--g~~~--~~~~~~~  180 (377)
                      .++..+++.+.+.+|++ +.+++   ++.++..+      .  ....++|+|||+++|.++.+.+  +.+.  ......+
T Consensus       102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl  180 (343)
T 3cer_A          102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM  180 (343)
T ss_dssp             TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred             cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence            45566777776777765 33443   22222222      1  2356999999999999998877  4321  1256789


Q ss_pred             cccHHHHHHHH
Q 017089          181 DLAGRDLTDAL  191 (377)
Q Consensus       181 ~~GG~~l~~~l  191 (377)
                      |+|+-.+++.+
T Consensus       181 plG~v~lt~~~  191 (343)
T 3cer_A          181 NIGSVRMTERH  191 (343)
T ss_dssp             SCCHHHHHHHT
T ss_pred             ehhHHHHHHHh
Confidence            99999888876

>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}

Probab=95.85  E-value=0.0025  Score=58.08  Aligned_cols=73  Identities=16%  Similarity=0.189  Sum_probs=50.4

Q ss_pred             HhHHHHHhhccccCCCCeEEeee---ccccc------ccccCCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHH
Q 017089          116 ANREKMTQIMFETFNTPAMYVAI---QAVLS------LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD  186 (377)
Q Consensus       116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a------~~~~g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~  186 (377)
                      .++..+++.+.+..|++ +.++.   ++-++      .+.....+++|+|||+++|.++.+.++.+.  ....+|+|.-.
T Consensus        89 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vr  165 (315)
T 3mdq_A           89 SNKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQR  165 (315)
T ss_dssp             TTHHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHH
T ss_pred             cCHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhH
Confidence            45566777776777776 33443   22221      122223579999999999999999999877  56789999877


Q ss_pred             HHHHH
Q 017089          187 LTDAL  191 (377)
Q Consensus       187 l~~~l  191 (377)
                      +++.+
T Consensus       166 l~e~f  170 (315)
T 3mdq_A          166 LIDRF  170 (315)
T ss_dssp             HHHHS
T ss_pred             HHHHh
Confidence            76654

>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*

Probab=95.68  E-value=0.0091  Score=58.21  Aligned_cols=74  Identities=11%  Similarity=0.080  Sum_probs=51.5

Q ss_pred             HHhHHHHHhhccccCCCCeEEeeecc---cccccc----cC-CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHH
Q 017089          115 KANREKMTQIMFETFNTPAMYVAIQA---VLSLYA----SG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD  186 (377)
Q Consensus       115 ~~~~~~l~~~lfe~~~~~~v~~~~~~---~~a~~~----~g-~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~  186 (377)
                      ..++..+++.+-+..|++ |.+++..   -+...+    .. ...++|||||+++|.++-..++.+.  ....+++|.-.
T Consensus        95 A~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vr  171 (513)
T 1u6z_A           95 ALNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVS  171 (513)
T ss_dssp             CTTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHH
T ss_pred             CcCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHH
Confidence            355677788787888876 3444422   222211    11 2379999999999999998888876  56789999988


Q ss_pred             HHHHH
Q 017089          187 LTDAL  191 (377)
Q Consensus       187 l~~~l  191 (377)
                      +++.+
T Consensus       172 lte~f  176 (513)
T 1u6z_A          172 FAQLY  176 (513)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87665

>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*

Probab=95.57  E-value=0.088  Score=47.85  Aligned_cols=46  Identities=17%  Similarity=0.160  Sum_probs=35.8

Q ss_pred             ccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017089          127 ETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~  174 (377)
                      +.+++| |.+.++.-+++++.       +..+.++|-+|.+ +-...|.||+++.
T Consensus        94 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~  146 (321)
T 3vgl_A           94 QRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR  146 (321)
T ss_dssp             HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred             hhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence            456777 88999999888752       4578999999976 7777788998764

>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}

Probab=95.37  E-value=0.044  Score=53.26  Aligned_cols=73  Identities=21%  Similarity=0.195  Sum_probs=50.7

Q ss_pred             HHhHHHHHhhccccCCCCeEEeeec---cccccc----ccCCceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHH
Q 017089          115 KANREKMTQIMFETFNTPAMYVAIQ---AVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL  187 (377)
Q Consensus       115 ~~~~~~l~~~lfe~~~~~~v~~~~~---~~~a~~----~~g~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l  187 (377)
                      ..++..+++.+.+..|++ |.+++.   +-+..+    +.....++|||||+++|.++-+.+|.+.  ....+|+|.-.+
T Consensus        99 A~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl  175 (508)
T 3hi0_A           99 AENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRL  175 (508)
T ss_dssp             STTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHH
T ss_pred             CcCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEeh
Confidence            455666777776777876 334432   222222    2233578999999999999999999887  567899999777


Q ss_pred             HHH
Q 017089          188 TDA  190 (377)
Q Consensus       188 ~~~  190 (377)
                      ++.
T Consensus       176 ~e~  178 (508)
T 3hi0_A          176 SEQ  178 (508)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            753

>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}

Probab=95.20  E-value=0.14  Score=46.69  Aligned_cols=53  Identities=21%  Similarity=0.233  Sum_probs=37.6

Q ss_pred             CcccccCCcCCcChHHHHHHHHHhhCCC-CceEEEECCCCCccccchhhhhhhc
Q 017089          298 NIVLSGGSTMFPGIADRMSKEITALAPS-SMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       298 nIil~GG~s~i~gl~~rl~~eL~~~~~~-~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      .|||.||.+..+-|.+++++.+.+.... ...++|..+.-...+.-+||+.++-
T Consensus       272 ~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l  325 (327)
T 4db3_A          272 VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI  325 (327)
T ss_dssp             EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred             EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence            5888888888877888888888776532 2245666555556777889887653

>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}

Probab=95.16  E-value=0.093  Score=47.68  Aligned_cols=46  Identities=17%  Similarity=0.163  Sum_probs=35.7

Q ss_pred             ccC-CCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017089          127 ETF-NTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       127 e~~-~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~  174 (377)
                      +.+ ++| |++.++.-+++++.       +..+.++|-+|.+ +-...|.+|+++.
T Consensus       115 ~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~  168 (321)
T 3r8e_A          115 SEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFI  168 (321)
T ss_dssp             HHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred             HHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEec
Confidence            456 776 78999998887752       4578999999976 7777788998775

>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*

Probab=94.82  E-value=0.058  Score=49.61  Aligned_cols=73  Identities=11%  Similarity=0.025  Sum_probs=47.4

Q ss_pred             ChHHHHHHHHhcCCH-HHHHHhhcCcccccC-CcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhh
Q 017089          275 GIHETTYNSIMKCDV-DIRKDLYGNIVLSGG-STMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       275 ~l~~~I~~~i~~~~~-~~~~~l~~nIil~GG-~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      +|..+|.+.|.+... --++.-+++|+++|| .++.|++.+.|.+.|.---..  .+++.-++++++.--+||++++
T Consensus       284 gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~  358 (360)
T 2i7n_A          284 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL  358 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence            344444444433211 113444568999999 999999999999988531111  2345556678999999998864

>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}

Probab=93.86  E-value=0.1  Score=47.27  Aligned_cols=46  Identities=15%  Similarity=0.183  Sum_probs=35.4

Q ss_pred             ccCCCCeEEeeeccccccccc-------CCceEEEEeCCCCceEEEEeeCCcccc
Q 017089          127 ETFNTPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~i~~v~~g~~~~  174 (377)
                      +.+++| |.+.++.-+++++.       +..+.++|-+|.+ +-...+.+|.++.
T Consensus       106 ~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~  158 (326)
T 2qm1_A          106 SALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH  158 (326)
T ss_dssp             HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred             HHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence            445677 78999999988752       4578999999987 6677788887764

>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A

Probab=92.97  E-value=0.054  Score=49.00  Aligned_cols=25  Identities=28%  Similarity=0.541  Sum_probs=23.5

Q ss_pred             ceEEEEeCCCCceEEEEeeCCcccc
Q 017089          150 TTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       150 ~~~lVVDiG~~~t~i~~v~~g~~~~  174 (377)
                      .++++||||+++|+|+|+.+|+++.
T Consensus       127 ~~~llvDIGsTTTDIipi~~G~pl~  151 (334)
T 3cet_A          127 ENCILVDMGSTTTDIIPIVEGKVVA  151 (334)
T ss_dssp             SSEEEEEECSSCEEEEEEETTEECC
T ss_pred             CCEEEEEcCcchhhhhhhcCCeecc
Confidence            5799999999999999999999975

>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}

Probab=92.19  E-value=0.54  Score=41.38  Aligned_cols=18  Identities=22%  Similarity=0.281  Sum_probs=16.3

Q ss_pred             cEEEeCCCCceEEeeeCC
Q 017089            9 PLVCDNGTGMVKAGFAGD   26 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~   26 (377)
                      .++||+|.+++|+|+..+
T Consensus         4 lL~IDIGNT~iK~gl~d~   21 (266)
T 3djc_A            4 ILCIDVGNSHIYGGVFDG   21 (266)
T ss_dssp             EEEEEECSSEEEEEEEET
T ss_pred             EEEEEECCCeEEEEEEEC
Confidence            699999999999999855

>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}

Probab=90.61  E-value=1.2  Score=39.15  Aligned_cols=18  Identities=22%  Similarity=0.207  Sum_probs=15.6

Q ss_pred             cEEEeCCCCceEEeeeCC
Q 017089            9 PLVCDNGTGMVKAGFAGD   26 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~   26 (377)
                      -++||+|.+++|+|+..+
T Consensus         2 lL~IDIGNT~ik~gl~~~   19 (268)
T 2h3g_X            2 IFVLDVGNTNAVLGVFEE   19 (268)
T ss_dssp             EEEEEECSSEEEEEEEET
T ss_pred             EEEEEECcCcEEEEEEEC
Confidence            378999999999998854

>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A

Probab=89.37  E-value=0.69  Score=40.25  Aligned_cols=19  Identities=21%  Similarity=0.193  Sum_probs=16.4

Q ss_pred             cEEEeCCCCceEEeeeCCC
Q 017089            9 PLVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~   27 (377)
                      .++||+|.+++|+|+..++
T Consensus         5 ~L~IDIGNT~ik~gl~~~~   23 (249)
T 3bex_A            5 YLLVDVGNTHSVFSITEDG   23 (249)
T ss_dssp             EEEEEECSSEEEEEEESSS
T ss_pred             EEEEEECCCeEEEEEEECC
Confidence            5889999999999988543

>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*

Probab=87.76  E-value=1.3  Score=42.05  Aligned_cols=89  Identities=11%  Similarity=0.083  Sum_probs=47.8

Q ss_pred             HHHHHHHHHhccccccc-CCCCCcEEEeeCCCCC------HHhHHHHHhhccccC---CC--CeEEeeecc-------cc
Q 017089           82 DDMEKIWHHTFYNELRV-APEEHPVLLTEAPLNP------KANREKMTQIMFETF---NT--PAMYVAIQA-------VL  142 (377)
Q Consensus        82 ~~~~~~~~~~~~~~L~~-~~~~~~vvl~~~~~~~------~~~~~~l~~~lfe~~---~~--~~v~~~~~~-------~~  142 (377)
                      +.++.+++.+. +.... ..+..|+.+....-+.      ...++.+++.+-+.+   ++  ..+.++...       ++
T Consensus        89 ~~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~  167 (452)
T 3zx3_A           89 AYLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT  167 (452)
T ss_dssp             HHHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence            35566666653 22221 1345677766543221      123455555554443   33  456666532       22


Q ss_pred             cccccC------CceEEEEeCCCCceEEEEeeCCc
Q 017089          143 SLYASG------RTTGIVLDSGDGVSHTVPIYEGY  171 (377)
Q Consensus       143 a~~~~g------~~~~lVVDiG~~~t~i~~v~~g~  171 (377)
                      +.|..|      ..+..++|+|+++|+|+-..++.
T Consensus       168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~  202 (452)
T 3zx3_A          168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS  202 (452)
T ss_dssp             HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred             HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence            233334      25677889999999999666553

>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5

Probab=84.31  E-value=3.4  Score=36.55  Aligned_cols=69  Identities=16%  Similarity=0.073  Sum_probs=46.3

Q ss_pred             cEEEeeCCCCCHHhHHHHHhhccccCCC-CeEEeeecccccccc-cCCceEEEEeCCCCceEEEEeeCCccc
Q 017089          104 PVLLTEAPLNPKANREKMTQIMFETFNT-PAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEGYAL  173 (377)
Q Consensus       104 ~vvl~~~~~~~~~~~~~l~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~~~lVVDiG~~~t~i~~v~~g~~~  173 (377)
                      .+-+..|-.. ......+.+.+-+.+++ ..+.+.++.-+|+++ .+..+++++=+|.+..-...+.||+..
T Consensus        62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~  132 (291)
T 1zbs_A           62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA  132 (291)
T ss_dssp             EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred             EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence            4667677654 22223444555455665 368999999999987 567788888888776555556788775

>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5

Probab=81.42  E-value=8.4  Score=34.14  Aligned_cols=89  Identities=12%  Similarity=0.175  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHhcccccccCCCC---CcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccccccc-CCceEEEEe
Q 017089           81 WDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-GRTTGIVLD  156 (377)
Q Consensus        81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~~~lVVD  156 (377)
                      ++.+...++.++ +..+.+..+   ..+-+..|-......... ++..|.. +. .|.+.++.-+++++. +..++++|-
T Consensus        53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~-l~~~~~~-~~-pv~v~NDa~aaa~ge~~~~~~v~v~  128 (305)
T 1zc6_A           53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGE-FESQAPG-FA-RLSLATDGYTTLLGAHGGQPGIIVA  128 (305)
T ss_dssp             HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHH-HHHTCCC-CS-EEEEECHHHHHHHHHTTTSSEEEEE
T ss_pred             HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHH-HHHhCCC-Cc-eEEEECCHHHHHHhhcCCCCeEEEE
Confidence            345555555554 323333333   236677776554333222 2222221 33 488999999988873 567888888


Q ss_pred             CCCCceEEEEeeCCccc
Q 017089          157 SGDGVSHTVPIYEGYAL  173 (377)
Q Consensus       157 iG~~~t~i~~v~~g~~~  173 (377)
                      +|.+..-...+.+|...
T Consensus       129 ~GTGigg~~i~~~G~~~  145 (305)
T 1zc6_A          129 LGTGSIGEALYPDGSHR  145 (305)
T ss_dssp             ESSSEEEEEECTTSCEE
T ss_pred             ecCCeEEEEEeCCCcEE
Confidence            88876433333488654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	377
d2fxua2	225	c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxI	1e-117
d1k8ka2	258	c.55.1.1 (A:161-418) Actin-related protein 3, Arp3	1e-107
d1k8kb1	190	c.55.1.1 (B:154-343) Actin-related protein 2, Arp2	5e-81
d2fxua1	140	c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId:	2e-75
d1k8ka1	158	c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {	6e-72

>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 225

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  337 bits (866), Expect = e-117
 Identities = 192/225 (85%), Positives = 210/225 (93%)

Query: 149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAER 208
           RTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAER
Sbjct: 1   RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAER 60

Query: 209 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSM 268
           EIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS 
Sbjct: 61  EIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSF 120

Query: 269 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK 328
           IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+PGIADRM KEITALAPS+MK
Sbjct: 121 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMK 180

Query: 329 IKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVH 373
           IK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GPSIVH
Sbjct: 181 IKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 225

>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 258

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  314 bits (805), Expect = e-107
 Identities = 84/251 (33%), Positives = 123/251 (49%), Gaps = 24/251 (9%)

Query: 151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREI 210
           TG V+DSGDGV+H +P+ EGY +   I  + +AGRD+T  + ++L +R          E 
Sbjct: 4   TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLET 63

Query: 211 VRDMKEKLAYIALDYEQELETAKT-SSAVEKSYEL-----PDGQVITIGAERFRCPEVLF 264
            + +KE+ +Y+  D  +E     T  S   K Y            I +G ERF  PE+ F
Sbjct: 64  AKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFF 123

Query: 265 QPSMIGMEAA-GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIT--- 320
            P     +    I E     I  C +D+R+ LY NIVLSGGSTMF     R+ +++    
Sbjct: 124 HPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTV 183

Query: 321 -------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDES 367
                         L P  + ++V+    ++Y+VW GGS+LAS   F Q+   K +Y+E 
Sbjct: 184 DARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEI 243

Query: 368 GPSIV-HRKCF 377
           GPSI  H   F
Sbjct: 244 GPSICRHNPVF 254

>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Length = 190

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 2, Arp2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  244 bits (623), Expect = 5e-81
 Identities = 85/177 (48%), Positives = 123/177 (69%)

Query: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
           G+V+DSGDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY+F  +A+ E V
Sbjct: 1   GVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETV 60

Query: 212 RDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGM 271
           R +KEKL Y+  + EQE + A  ++ + +SY LPDG++I +G ERF  PE LFQP +I +
Sbjct: 61  RMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINV 120

Query: 272 EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK 328
           E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L    + 
Sbjct: 121 EGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVL 177

>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 140

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  227 bits (580), Expect = 2e-75
 Identities = 131/139 (94%), Positives = 136/139 (97%)

Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 2   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 61

Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 62  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 121

Query: 130 NTPAMYVAIQAVLSLYASG 148
           N PAMYVAIQAVLSLYASG
Sbjct: 122 NVPAMYVAIQAVLSLYASG 140

>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 158

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  219 bits (560), Expect = 6e-72
 Identities = 63/153 (41%), Positives = 84/153 (54%), Gaps = 9/153 (5%)

Query: 9   PLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--------RPRHTGVMVGMGQKDAYVGDEA 60
             V D GTG  K G+AG+  P+ + PS +               VM G+   D ++GDEA
Sbjct: 5   ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEA 64

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
             K      K+PI HGIV +WD ME+      +  LR  PE+H  LLTE PLN   NRE 
Sbjct: 65  IEKPTY-ATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREY 123

Query: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGI 153
             +IMFE+FN P +Y+A+QAVL+L AS  +  +
Sbjct: 124 TAEIMFESFNVPGLYIAVQAVLALAASWTSRQV 156

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	377
d2fxua2	225	Actin {Cow (Bos taurus) [TaxId: 9913]}	100.0
d1k8ka2	258	Actin-related protein 3, Arp3 {Cow (Bos taurus) [T	100.0
d1k8kb1	190	Actin-related protein 2, Arp2 {Cow (Bos taurus) [T	100.0
d1k8ka1	158	Actin-related protein 3, Arp3 {Cow (Bos taurus) [T	99.97
d2fxua1	140	Actin {Cow (Bos taurus) [TaxId: 9913]}	99.96
d1e4ft2	191	Cell division protein FtsA {Thermotoga maritima [T	99.45
d1jcea2	196	Prokaryotic actin homolog MreB {Thermotoga maritim	99.33
d1dkgd2	198	Heat shock protein 70kDa, ATPase fragment {Escheri	99.19
d1bupa2	193	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	99.06
d1jcea1	137	Prokaryotic actin homolog MreB {Thermotoga maritim	98.95
d2zgya2	163	Plasmid segregation protein ParM {Escherichia coli	98.73
d1dkgd1	183	Heat shock protein 70kDa, ATPase fragment {Escheri	98.5
d1bupa1	185	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	98.47
d2fsja1	161	Hypothetical protein Ta0583 {Archaeon Thermoplasma	98.46
d2i7na2	212	Pantothenate kinase 1, PANK1 {Human (Homo sapiens)	93.76
d2fsja2	164	Hypothetical protein Ta0583 {Archaeon Thermoplasma	93.59
d1t6ca2	180	Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6	93.1
d1u6za3	177	Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5	92.75
d1huxa_	259	Hydroxyglutaryl-CoA dehydratase component A {Acida	92.16
d2zgya1	157	Plasmid segregation protein ParM {Escherichia coli	90.25
d1zc6a1	114	Probable N-acetylglucosamine kinase CV2896 {Chromo	86.38
d2d0oa3	203	Diol dehydratase-reactivating factor large subunit	84.19
d1nbwa3	202	ATPase domain of the glycerol dehydratase reactiva	81.64
d1q18a1	110	Glucokinase Glk {Escherichia coli [TaxId: 562]}	80.92

>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=9.1e-53  Score=370.08  Aligned_cols=225  Identities=85%  Similarity=1.342  Sum_probs=216.4

Q ss_pred             CceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHH
Q 017089          149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE  228 (377)
Q Consensus       149 ~~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~  228 (377)
                      ++||||||+|++.|+|+||+||+++.++.+++++||++++++|.++|.+++.......+.+.++++|+.+|+++.+...+
T Consensus         1 rtTglVVDiG~~~t~v~PV~eG~~l~~~~~~~~~GG~~lt~~l~~~L~~~~~~~~~~~~~~~~~~~ke~~~~~~~d~~~e   80 (225)
T d2fxua2           1 RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENE   80 (225)
T ss_dssp             CSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHH
T ss_pred             CCEEEEEEcCCCcEEEEEEECCEEchhceEEEECcHHHHHHHHHHHHhhccCCcCCHHHHHHHHHHHHHHhhcccchhHH
Confidence            57999999999999999999999999999999999999999999999999998888888899999999999999999888


Q ss_pred             HHHhccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCC
Q 017089          229 LETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF  308 (377)
Q Consensus       229 ~~~~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i  308 (377)
                      .............|.+|||+.+.++.+|+.++|+||+|...+.+..+|+++|.++|.+||.|.|+.|++||+||||+|++
T Consensus        81 ~~~~~~~~~~~~~~~lpdg~~i~i~~er~~~~E~lF~p~~~~~~~~gl~~~i~~sI~~~~~d~r~~l~~nIvl~GG~s~~  160 (225)
T d2fxua2          81 MATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY  160 (225)
T ss_dssp             HHHHHHCSTTCEEEECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCS
T ss_pred             HhhcccCcccceeEECCCCCEEEEchHhccccHhhcCccccCCccCChhHHHHHHhhcCCcchhhhhhcCEEEeCCcccC
Confidence            88777777788999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhhcCCcccc
Q 017089          309 PGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVH  373 (377)
Q Consensus       309 ~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~  373 (377)
                      |||.+||++||..+.+...++++..+++|++++|+|||++|++++|++.||||+||+|+|++||+
T Consensus       161 ~G~~~RL~~El~~~~~~~~~~~v~~~~~~~~~aW~Ggsilasl~~f~~~~itk~eY~E~G~~ivh  225 (225)
T d2fxua2         161 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH  225 (225)
T ss_dssp             TTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC
T ss_pred             CchhHHHHhHHHHhhccccceEEecCCCCCeeEEeCHhhhhcCccHhhEEEEHHHHHhhCccccC
Confidence            99999999999999999889999999999999999999999999999999999999999999985

>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.3e-50  Score=360.08  Aligned_cols=228  Identities=36%  Similarity=0.664  Sum_probs=204.5

Q ss_pred             ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHH
Q 017089          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL  229 (377)
Q Consensus       150 ~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~  229 (377)
                      -||||||+|++.|+|+||+||+++.++.+++++||++++++|.++|.++++......+.+.++.+|+++|+++.|+..+.
T Consensus         3 ~TGlVVDiG~~~T~v~PV~eG~~l~~~~~~~~~GG~~lt~~L~~~L~~~~~~~~~~~~~~~~~~~ke~~~~v~~d~~~e~   82 (258)
T d1k8ka2           3 LTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEF   82 (258)
T ss_dssp             CCEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHH
T ss_pred             CEEEEEEcCCCcEEEEEEECCEEchhheEEEeCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhHHhhhcccccchHHHH
Confidence            47999999999999999999999999999999999999999999999999988887788999999999999999998887


Q ss_pred             HHhccC-CCcceEEEcC-----CCcEEeeCCccccccccCCCCccCCCc-CCChHHHHHHHHhcCCHHHHHHhhcCcccc
Q 017089          230 ETAKTS-SAVEKSYELP-----DGQVITIGAERFRCPEVLFQPSMIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLS  302 (377)
Q Consensus       230 ~~~~~~-~~~~~~~~~p-----~~~~i~i~~~~~~~~E~lf~p~~~~~~-~~~l~~~I~~~i~~~~~~~~~~l~~nIil~  302 (377)
                      +..... ....+.|..+     ++..+.++.+|+.++|+||+|+..+.+ ..+|+++|.++|.+||+|.|+.|++||+||
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~er~~~~E~lF~p~~~~~~~~~~l~~~i~~si~~~~~d~r~~L~~nIvl~  162 (258)
T d1k8ka2          83 NKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLS  162 (258)
T ss_dssp             HHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEE
T ss_pred             HhhcccccccccccccccccCCCCeEEecCccceeccHHHhhhhhhcccccccchHHHHHHHHhccHHhhHHHHhCEEEe
Confidence            655432 2234455554     466888999999999999999988765 578999999999999999999999999999


Q ss_pred             cCCcCCcChHHHHHHHHHhhC----------------CCCceEEEECCCCCccccchhhhhhhcccccccccccHHHHhh
Q 017089          303 GGSTMFPGIADRMSKEITALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE  366 (377)
Q Consensus       303 GG~s~i~gl~~rl~~eL~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e  366 (377)
                      ||+|++|||.+||++||...+                |...++++..+++|++++|+|||++|++++|+++||||+||+|
T Consensus       163 GG~s~~~Gf~eRL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~r~~s~W~Ggsila~l~~f~~~~Itk~eY~E  242 (258)
T d1k8ka2         163 GGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEE  242 (258)
T ss_dssp             SGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHHHH
T ss_pred             cCcccCCCHHHHHHHHHHhhcchhhhhhhhccccccCCCCceeeEecCCCCCceehHHHHHHHcCccHHhheecHHHHhh
Confidence            999999999999999997653                3345688999999999999999999999999999999999999


Q ss_pred             cCCccc-ccccC
Q 017089          367 SGPSIV-HRKCF  377 (377)
Q Consensus       367 ~G~~~~-~~k~~  377 (377)
                      +|++|| +||||
T Consensus       243 ~G~~iv~~rk~f  254 (258)
T d1k8ka2         243 IGPSICRHNPVF  254 (258)
T ss_dssp             HCGGGGGCCCCC
T ss_pred             hChHHHhcCCCc
Confidence            999999 68898

>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 2, Arp2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.7e-37  Score=262.55  Aligned_cols=174  Identities=49%  Similarity=0.901  Sum_probs=165.6

Q ss_pred             EEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHHH
Q 017089          152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET  231 (377)
Q Consensus       152 ~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~  231 (377)
                      |||||+|++.|+|+||+||+++.++..++++||+++++++.++|.+++..+....+...++++|++.|+++.++.++...
T Consensus         1 GlVVDiG~~~T~v~PV~dG~~l~~a~~~~~igG~~lt~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~v~~~~~~e~~~   80 (190)
T d1k8kb1           1 GVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKL   80 (190)
T ss_dssp             CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHH
T ss_pred             CEEEEcCCCcEEEEEeECCEEcccceEEEeccHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHhhhhhhcccHHHHHHh
Confidence            68999999999999999999999999999999999999999999999988887778899999999999999999988877


Q ss_pred             hccCCCcceEEEcCCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHHHhhcCcccccCCcCCcCh
Q 017089          232 AKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI  311 (377)
Q Consensus       232 ~~~~~~~~~~~~~p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl  311 (377)
                      ..........|.+|||+.+.++.+|+.++|.||+|+..+.+..+|+++|.++|.+||.|.|+.|++|||||||+|++|||
T Consensus        81 ~~~~~~~~~~~~lpdg~~i~i~~er~~~~E~lF~p~~~~~~~~~l~~~i~~si~~c~~d~r~~L~~NIvl~GG~Sl~pGf  160 (190)
T d1k8kb1          81 ALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGL  160 (190)
T ss_dssp             HHHCSTTCEEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTH
T ss_pred             hhcccceeeeeecCCCcEEEEChhhccccccccChhhcCcccccHHHHHHHHHHhCCHhHHHHHHcCEEEECcccCCCCH
Confidence            77667778899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhCCC
Q 017089          312 ADRMSKEITALAPS  325 (377)
Q Consensus       312 ~~rl~~eL~~~~~~  325 (377)
                      .+||++||+++.|.
T Consensus       161 ~~RL~~EL~~l~p~  174 (190)
T d1k8kb1         161 PSRLERELKQLYLE  174 (190)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhH
Confidence            99999999998764

>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=2.3e-31  Score=219.01  Aligned_cols=145  Identities=43%  Similarity=0.742  Sum_probs=128.5

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCC--------ccccCCCcceeeccchhcccCcceeeccccCCcc
Q 017089            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG--------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV   78 (377)
Q Consensus         7 ~~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~--------~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i   78 (377)
                      .++||||+||+++|+||+|++.|++++||+++.+....        .+.+.+..++++|+++.++. ...+.+|+++|.+
T Consensus         3 ~PavViD~GS~~~KaG~age~~P~~i~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~ig~e~~~~~-~~~~~~pi~~G~i   81 (158)
T d1k8ka1           3 LPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP-TYATKWPIRHGIV   81 (158)
T ss_dssp             SCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-TSEEECCEETTEE
T ss_pred             CCcEEEECCCCeEEEEECCCCCCCEEeccceeecccccccCchhcccccCCCccceecChhhhhCC-CccccccccCCeE
Confidence            46799999999999999999999999999998875443        22333456788999987654 5788999999999


Q ss_pred             CCHHHHHHHHHHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCceE
Q 017089           79 SNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG  152 (377)
Q Consensus        79 ~d~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~  152 (377)
                      .|||+++.+|+++|.+.|.++++++|+++++|+++++..|++++|++||+|++|++++.++++||+||+|++++
T Consensus        82 ~dwd~~e~l~~~~~~~~l~v~~~~~pvlltEp~~~~~~~Re~~~EilFE~~~vpa~~~~~~~~Lslya~g~~~~  155 (158)
T d1k8ka1          82 EDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQ  155 (158)
T ss_dssp             SCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTT
T ss_pred             ecHHHHHHHHHHHHHHhcccCCCCCceeeeecCCCCHHHHHHHHHHHhhhcCCCEEEEEchhhhhheeCCCCCC
Confidence            99999999999999899999999999999999999999999999999999999999999999999999998754

>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=7.4e-31  Score=212.18  Aligned_cols=140  Identities=94%  Similarity=1.486  Sum_probs=127.3

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcccCcceeeccccCCccCCHHHHHHHH
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIW   88 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d~~~~~~~~   88 (377)
                      .||||+||++||+||+|++.|++++|+++++++......+..+.+.++|+++........+++|+++|.+.||+.++++|
T Consensus         1 avViD~Gs~~~k~G~age~~P~~~~ps~~g~~~~~~~~~~~~~~~~~igd~~~~~~~~~~~~~p~~~g~v~dwd~~e~~~   80 (140)
T d2fxua1           1 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIW   80 (140)
T ss_dssp             CEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHHHHHHH
T ss_pred             CEEEECCCCeEEEeeCCCCCcceEeccceeeecccccccCccccceeeChhHhhccccccccCcCcCCcccCHHHHHHHH
Confidence            58999999999999999999999999999999888777666677788999988877778899999999999999999999


Q ss_pred             HHhcccccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccC
Q 017089           89 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG  148 (377)
Q Consensus        89 ~~~~~~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g  148 (377)
                      +++|.+.|.++++++|+++++|++++...|++++|++||.+++|++++.+++++++|++|
T Consensus        81 ~~~~~~~l~~~~~~~pvlltE~~~~~~~~r~~~~EilFE~~~vp~~~~~~~~~ls~ys~G  140 (140)
T d2fxua1          81 HHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG  140 (140)
T ss_dssp             HHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTT
T ss_pred             HHhhhhhcccCCCCCcceeeccCCCCHHHHHHHHHHhhccCCCCEEEEEhhHHhHhhcCC
Confidence            999988999999999999999999999999999999999999999999999999999987

>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Cell division protein FtsA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.45  E-value=7e-14  Score=117.43  Aligned_cols=141  Identities=14%  Similarity=0.163  Sum_probs=86.1

Q ss_pred             eEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHHH
Q 017089          151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELE  230 (377)
Q Consensus       151 ~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~  230 (377)
                      ..+|||||+++|+++.+.+|.++  ....+++||+++|+.+.+.+.         ...+.+|++|.+++.+..+..    
T Consensus         8 Gv~vvDiG~~tt~i~i~~~G~l~--~~~~i~~GG~~iT~~Ia~~l~---------i~~~~AE~iK~~~g~~~~~~~----   72 (191)
T d1e4ft2           8 GVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVIKDVSAVLD---------TSFEESERLIITHGNAVYNDL----   72 (191)
T ss_dssp             CEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHHHHHHT---------CCHHHHHHHHHHHCCSCCTTC----
T ss_pred             CEEEEEeCCCcEEEEEEECCeEE--EEEEEeeChHHHHHHHHHHhc---------ccHHHHHHHHhhccccccccc----
Confidence            47899999999999999999998  667789999999999998872         245779999999987643311    


Q ss_pred             HhccCCCcceEEEcCCC-cEEeeCCcc-ccccccCCCCccCCCcCCChHHHHHHHHhcC----CHHHHHHhhcCcccccC
Q 017089          231 TAKTSSAVEKSYELPDG-QVITIGAER-FRCPEVLFQPSMIGMEAAGIHETTYNSIMKC----DVDIRKDLYGNIVLSGG  304 (377)
Q Consensus       231 ~~~~~~~~~~~~~~p~~-~~i~i~~~~-~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~----~~~~~~~l~~nIil~GG  304 (377)
                           ......+...++ ....+.... ..+.+..+..         +.+.+.+.+..+    ..+....+..+|+||||
T Consensus        73 -----~~~~i~~~~~~~~~~~~~~~~~l~~ii~~~~~e---------i~~~i~~~~~~~~~~~~~~~~~~~~~~IvLtGG  138 (191)
T d1e4ft2          73 -----KEEEIQYRGLDGNTIKTTTAKKLSVIIHARLRE---------IMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGG  138 (191)
T ss_dssp             -----CCCEEEEECTTSSCEEEEEHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHC------CGGGCEEEESG
T ss_pred             -----cchhcccccccCCCcccccHHHHHHHHHHHHHH---------HHHHHHHHHHhhccchhhhcccccCceEEEecc
Confidence                 011111111111 111111000 0000111111         223333333332    22233445678999999


Q ss_pred             CcCCcChHHHHHHHHH
Q 017089          305 STMFPGIADRMSKEIT  320 (377)
Q Consensus       305 ~s~i~gl~~rl~~eL~  320 (377)
                      +|++|||.+.+++.|.
T Consensus       139 gs~l~gl~~~l~~~l~  154 (191)
T d1e4ft2         139 GAKIPRINELATEVFK  154 (191)
T ss_dssp             GGGSTTHHHHHHHHHC
T ss_pred             hhhhhhHHHHHHHHHC
Confidence            9999999999998884

>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

Probab=99.33  E-value=1.4e-12  Score=109.68  Aligned_cols=174  Identities=17%  Similarity=0.249  Sum_probs=106.5

Q ss_pred             ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHhccceecCHHHHH
Q 017089          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL  229 (377)
Q Consensus       150 ~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~  229 (377)
                      .+.+|+|+|+++|+|+.+..|.+.  ....++.||.+++..+...+........   ........+..............
T Consensus         7 ~gvlV~DiGGGT~Dvsi~~~g~~~--~~~~~~~gg~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   81 (196)
T d1jcea2           7 SGNMVVDIGGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRVAI---GERTAERVKIEIGNVFPSKENDE   81 (196)
T ss_dssp             SCEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCEEC---CHHHHHHHHHHHCBCSCCHHHHH
T ss_pred             CceEEEEcCCCcEEEEEEEcCCEe--EEeeecCCCcccccchhhhhhhhhcccc---cchhHHHHHHHHhhhhhhhhccc
Confidence            467999999999999999999877  4567899999999999888754321111   11223333333322221111111


Q ss_pred             HHhccCCCcceEEEcCCCcEEee--C-CccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHHH-HhhcCcccccCC
Q 017089          230 ETAKTSSAVEKSYELPDGQVITI--G-AERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRK-DLYGNIVLSGGS  305 (377)
Q Consensus       230 ~~~~~~~~~~~~~~~p~~~~i~i--~-~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~~-~l~~nIil~GG~  305 (377)
                      ..     .........++.....  . .+.....+.++..         +.+.|.+++..+...... ...+.|+||||+
T Consensus        82 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~~l~~~~~~~~~~~~~~~IvLvGGs  147 (196)
T d1jcea2          82 LE-----TTVSGIDLSTGLPRKLTLKGGEVREALRSVVVA---------IVESVRTTLEKTPPELVSDIIERGIFLTGGG  147 (196)
T ss_dssp             CE-----EEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHH---------HHHHHHHHHHTSCHHHHHHHHHHCEEEESGG
T ss_pred             cc-----eeeeeeeccCCCccccccchhhHHHHHHHHHHH---------HHHHHHHHHHHhhccccccccccceEEeCch
Confidence            00     0011112222221111  1 1112233344433         677778888887766544 345679999999


Q ss_pred             cCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhc
Q 017089          306 TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       306 s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      |++|++++++++.+.        ..+....+|.+++..||+++++
T Consensus       148 S~ip~v~~~l~~~fg--------~~v~~~~~P~~aVA~GAai~~~  184 (196)
T d1jcea2         148 SLLRGLDTLLQKETG--------ISVIRSEEPLTAVAKGAGMVLD  184 (196)
T ss_dssp             GCSBTHHHHHHHHHS--------SCEEECSSTTTHHHHHHHHGGG
T ss_pred             hcchhHHHHHHHHHC--------cCCccCCChHHHHHHHHHHHHH
Confidence            999999999998872        1234456889999999998865

>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=99.19  E-value=6.5e-12  Score=105.78  Aligned_cols=169  Identities=20%  Similarity=0.245  Sum_probs=100.6

Q ss_pred             CCceEEEEeCCCCceEEEEee------CCcc-cccceEEecccHHHHHHHHHHHHHH-----cCCCccchhH-----HHH
Q 017089          148 GRTTGIVLDSGDGVSHTVPIY------EGYA-LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTAE-----REI  210 (377)
Q Consensus       148 g~~~~lVVDiG~~~t~i~~v~------~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~~-----~~~  210 (377)
                      |..+-+|+|+|+++++++.+.      ++.. +........+||+++++.+.+++.+     .+.+......     ...
T Consensus         1 g~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~   80 (198)
T d1dkgd2           1 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEA   80 (198)
T ss_dssp             CEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHH
T ss_pred             CCeEEEEEEcCCCcEEEEEEEEEccCCCcEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHH
Confidence            345789999999999999875      1211 1112234578999999999988853     2333322111     223


Q ss_pred             HHHHHHhccceecCHHHHHHHhccCCCcceEEEcC----C---Cc--EEeeCCcccc-ccccCCCCccCCCcCCChHHHH
Q 017089          211 VRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP----D---GQ--VITIGAERFR-CPEVLFQPSMIGMEAAGIHETT  280 (377)
Q Consensus       211 ~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p----~---~~--~i~i~~~~~~-~~E~lf~p~~~~~~~~~l~~~I  280 (377)
                      +++.|+.++..                ....+.+|    +   +.  .+.++.+.|. ..+.++..         +.++|
T Consensus        81 ~e~~K~~Ls~~----------------~~~~i~~~~~~~~~~~~~~~~~~itr~~~~~~~~~~~~~---------~~~~i  135 (198)
T d1dkgd2          81 AEKAKIELSSA----------------QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR---------SIELL  135 (198)
T ss_dssp             HHHHHHHTTSS----------------SEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHH---------HHHHH
T ss_pred             HHHHHHHhcCC----------------CeEEEEEeeeecCCCCCceEEEEEcHHHHHHHHHHHHHH---------HHHHH
Confidence            55555554321                11112221    1   11  2233333332 22222222         66667


Q ss_pred             HHHHhcCCHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          281 YNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       281 ~~~i~~~~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+++.+...+  ..-++.|+|+||+|++|.+.++|++.+..        ++....+|..++-.||+++|+.
T Consensus       136 ~~~l~~a~~~--~~~Id~v~lvGG~sr~p~l~~~i~~~f~~--------~~~~~~~p~~aVa~GAa~~aa~  196 (198)
T d1dkgd2         136 KVALQDAGLS--VSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRKDVNPDEAVAIGAAVQGGV  196 (198)
T ss_dssp             HHHHHTTTCC--TTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCBCSSCTTTHHHHHHHHHTTT
T ss_pred             HHHHHHhCCC--hhHCcEEEEEcCccCCHHHHHHHHHHHCC--------CCCCCCChHHHHHHHHHHHHHh
Confidence            7777665433  22367899999999999999999988742        2334557889999999999875

>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.06  E-value=3.3e-11  Score=101.01  Aligned_cols=172  Identities=19%  Similarity=0.249  Sum_probs=94.1

Q ss_pred             CceEEEEeCCCCceEEEEee--CCcc-cccceEEecccHHHHHHHHHHHHHHc-----CCCccchhH-----HHHHHHHH
Q 017089          149 RTTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMK  215 (377)
Q Consensus       149 ~~~~lVVDiG~~~t~i~~v~--~g~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik  215 (377)
                      ..+-+|+|+|+++++++.+-  ++.. +..+.....+||.++++.+.+++.++     +.+......     ...+++.|
T Consensus         4 e~~VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K   83 (193)
T d1bupa2           4 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK   83 (193)
T ss_dssp             CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEeCCCeEEEEEEEEeCCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHh
Confidence            35789999999999988753  2221 11222345799999999998887532     332221110     12344444


Q ss_pred             HhccceecCHHHHHHHhccCCCcceEEEc---CCCcEEeeCCccccccccCCCCccCCCcCCChHHHHHHHHhcCCHHHH
Q 017089          216 EKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIR  292 (377)
Q Consensus       216 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---p~~~~i~i~~~~~~~~E~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~~  292 (377)
                      +.++.              .  ....+.+   .++....+.-.|..+ |-++.|-     ...+.+.|.+++.+..  ..
T Consensus        84 ~~ls~--------------~--~~~~~~~~~~~~~~~~~~~itr~~~-e~~~~~~-----~~~~~~~i~~~l~~~~--~~  139 (193)
T d1bupa2          84 RTLSS--------------S--TQASIEIDSLYEGIDFYTSITRARF-EELNADL-----FRGTLDPVEKALRDAK--LD  139 (193)
T ss_dssp             HHHTT--------------S--SEEEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHTHHHHHHHHHHHT--CC
T ss_pred             hccCC--------------C--ceEEEEEecccCCCccceEEcHHHH-HHHHHHH-----HHHHHHHHHHHHHHcC--CC
Confidence            44331              1  1112222   223222222122222 2233330     0113344444443321  11


Q ss_pred             HHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          293 KDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       293 ~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.-++.|+++||+|++|.+++.+++.+...       ++..+.+|+.++-.||+++|+.
T Consensus       140 ~~~i~~V~lvGG~sr~p~v~~~i~~~f~~~-------~i~~~~~p~~aVa~GaA~~aa~  191 (193)
T d1bupa2         140 KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK-------ELNKSINPDEAVAYGAAVQAAI  191 (193)
T ss_dssp             GGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBCSSCGGGHHHHHHHHHHHH
T ss_pred             HHHCCEEEEECCccccHHHHHHHHHHcCCC-------CCCCCCChHHHHHHHHHHHHHh
Confidence            223578999999999998887777655321       2445568899999999999864

>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

Probab=98.95  E-value=9.7e-10  Score=86.47  Aligned_cols=131  Identities=11%  Similarity=0.086  Sum_probs=93.8

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCccccCCCcceeeccchhcc----cCcceeeccccCCccCCHHH
Q 017089            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         8 ~~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~d~~~   83 (377)
                      +.|.||+||+++.+.+.++.. ....|+..+....       .+..+.+|+++...    .......+++.++...+.+.
T Consensus         1 ~~iGIDlGTtns~va~~~~~~-v~~~~~~~~~~~~-------~~~~~~~g~~a~~~~~~~~~~~~~~k~~~~~~~~~~~~   72 (137)
T d1jcea1           1 KDIGIDLGTANTLVFLRGKGI-VVNEPSVIAIDST-------TGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV   72 (137)
T ss_dssp             CEEEEEECSSEEEEEETTTEE-EEEEESCEEEETT-------TCCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred             CeEEEEcChhhEEEEEeCCCE-EeecCCcceEecC-------CCeEEEEehHHhhhhhhccccceeEEeccCCccCcHHH
Confidence            468999999999997765431 1223444443221       12234456655443    23345678889999999998


Q ss_pred             HHHHHHHhcccccc-cCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeeccccccccc
Q 017089           84 MEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS  147 (377)
Q Consensus        84 ~~~~~~~~~~~~L~-~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~  147 (377)
                      .+.++.++...... .......+++++|..+...+|+.+.+.+ +.+|++.+.++++|+||+++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~VItVPa~f~~~qR~at~~Aa-~~AGl~vv~li~EPtAAAiGa  136 (137)
T d1jcea1          73 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAG-LEAGASKVFLIEEPMAAAIGS  136 (137)
T ss_dssp             HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCSEEEEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhcCccccceEEEeecccCHHHHHHHHHHH-HHcCCCEEEEeCCHHHHHhCC
Confidence            88888887643222 2234567999999999999999988887 889999999999999999875

>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Plasmid segregation protein ParM
species: Escherichia coli [TaxId: 562]

Probab=98.73  E-value=2.9e-09  Score=86.13  Aligned_cols=48  Identities=13%  Similarity=0.034  Sum_probs=38.8

Q ss_pred             ceEEEEeCCCCceEEEEeeCCccccc-ceEEecccHHHHHHHHHHHHHH
Q 017089          150 TTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTE  197 (377)
Q Consensus       150 ~~~lVVDiG~~~t~i~~v~~g~~~~~-~~~~~~~GG~~l~~~l~~~l~~  197 (377)
                      .+.+|||+|+++|+++.+.++..... +....+.||.++++.+.+.+..
T Consensus         7 ~~ilViDiGggTtDi~v~~~~~~~~~~~~~~~~~G~~~i~~~i~~~l~~   55 (163)
T d2zgya2           7 DSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSL   55 (163)
T ss_dssp             CEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCCcEEEEEEcCCeEEEEEeeccccccchHHHHHHHHhhHH
Confidence            57899999999999998877655433 3446799999999999988854

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=98.50  E-value=2.4e-08  Score=82.35  Aligned_cols=66  Identities=9%  Similarity=-0.010  Sum_probs=51.0

Q ss_pred             HHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCCc
Q 017089           82 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT  150 (377)
Q Consensus        82 ~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~  150 (377)
                      +....+++++..   +.++.  .-..+||++|..++..+|+.+.+.+ +.+|++.+.++++|.||++++|..
T Consensus       112 ~l~a~~L~~l~~~a~~~~~~--~~~~~VitVPa~f~~~~r~~l~~Aa-~~AG~~~~~li~EP~AAAl~Ygl~  180 (183)
T d1dkgd1         112 QISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAYGLD  180 (183)
T ss_dssp             HHHHHHHHHHHHHHHHHHSS--CCCEEEECBCTTCCHHHHHHHHHHH-HHTTCEESCCCBHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCEEEEecCHHHHHHHhccc
Confidence            444555555531   23332  3457999999999999999988887 789999999999999999998853

>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.47  E-value=1.1e-07  Score=78.26  Aligned_cols=65  Identities=8%  Similarity=-0.020  Sum_probs=50.8

Q ss_pred             HHHHHHHHHhcc---cccccCCCCCcEEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccccCC
Q 017089           82 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR  149 (377)
Q Consensus        82 ~~~~~~~~~~~~---~~L~~~~~~~~vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~  149 (377)
                      +....+++++..   +.++  ..-..+|+++|+.++..+|+.+.+.+ +.+|++.+.++++|.||++++|.
T Consensus       115 el~a~~l~~l~~~a~~~~~--~~~~~~VitvPa~f~~~qr~~~~~Aa-~~AGl~~~~li~EP~AAAl~Ygl  182 (185)
T d1bupa1         115 EVSSMVLTKMKEIAEAYLG--KTVTNAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGL  182 (185)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHhC--CCcCcEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHhcc
Confidence            445556665532   2232  23456999999999999999988877 88999999999999999999985

>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ta0583-like
domain: Hypothetical protein Ta0583
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.46  E-value=8.8e-08  Score=77.02  Aligned_cols=49  Identities=18%  Similarity=0.256  Sum_probs=39.0

Q ss_pred             ceEEEEeCCCCceEEEEeeCCc--ccccceEEecccHHHHHHHHHHHHHHc
Q 017089          150 TTGIVLDSGDGVSHTVPIYEGY--ALPHAILRLDLAGRDLTDALMKILTER  198 (377)
Q Consensus       150 ~~~lVVDiG~~~t~i~~v~~g~--~~~~~~~~~~~GG~~l~~~l~~~l~~~  198 (377)
                      .+.+|||||+++|+++.+.++.  +........+.|+.++.+.+.+.+..+
T Consensus         6 g~~lviDIG~gTtDi~v~~~~~~~~~~~~~~~~~~g~~~i~~~i~~~i~~~   56 (161)
T d2fsja1           6 GYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE   56 (161)
T ss_dssp             SEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCcCeEEEEEEECCCeEEEEEEeccHhHHHHHHHHHHHHHHHHH
Confidence            4689999999999999987653  444445578999999999998888643

>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.76  E-value=0.036  Score=45.12  Aligned_cols=72  Identities=11%  Similarity=0.044  Sum_probs=48.5

Q ss_pred             ChHHHHHHHHhcC-CHHHHHHhhcCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhh
Q 017089          275 GIHETTYNSIMKC-DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSI  347 (377)
Q Consensus       275 ~l~~~I~~~i~~~-~~~~~~~l~~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi  347 (377)
                      ++.++|.+.|... -...+..=+++|+++||.+.-..+++++.+.....+.. ..++++-+.+..|+.-+||.+
T Consensus       136 S~q~~v~~~l~~~a~~aa~~~~~k~iv~~Ggv~aN~~lr~~l~~~~~~~~~~-~~i~~~Fp~~~~y~galGA~l  208 (212)
T d2i7na2         136 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSK-GQLKALFLEHEGYFGAVGALL  208 (212)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTT-TSCCEEEETTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHhhCHHHHHHHHHHHHHHHhh-CCceEEecCChhhhHHHHHHH
Confidence            4556666555433 22334556688999999999999999998776554322 245665566777888888755

>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ta0583-like
domain: Hypothetical protein Ta0583
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.59  E-value=0.045  Score=42.50  Aligned_cols=130  Identities=15%  Similarity=0.075  Sum_probs=66.4

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceeEecCCCCc---------cccCCCcceeeccchhcccCcceeeccccCCccC
Q 017089            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVS   79 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~~P~~~~p~~~~~~~~~~~---------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~   79 (377)
                      .+.||+|-.++|+-. ++ .-.+.+||.++.....+.         ....++..+++|+.|....    ..+++......
T Consensus         3 iigiD~G~g~tK~~~-~~-~~~~~fPS~v~~~~~~~~~~~~~~~~~~~~~~~~~y~vG~~A~~~~----~~~~~~~dk~~   76 (164)
T d2fsja2           3 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNN----IRVPQGDGRLA   76 (164)
T ss_dssp             EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSC----CBCCSSTTCTT
T ss_pred             EEEEEcCCcceEEEe-cC-CCEEEEeeeceeccccccccCCCceeEEEEeCCeEEEEccchhhcc----ccccccccccc
Confidence            788999999999742 33 223567988876433221         1123456677887663321    12334444433


Q ss_pred             CHHHHHHHHHHhcccccccC-CCCCc--EEEeeCCCCCHHhHHHHHhhccc-------------cCCCCeEEeeeccccc
Q 017089           80 NWDDMEKIWHHTFYNELRVA-PEEHP--VLLTEAPLNPKANREKMTQIMFE-------------TFNTPAMYVAIQAVLS  143 (377)
Q Consensus        80 d~~~~~~~~~~~~~~~L~~~-~~~~~--vvl~~~~~~~~~~~~~l~~~lfe-------------~~~~~~v~~~~~~~~a  143 (377)
                      +.+. +.++..++....... .+...  +++-.|...-..+++++.+.+..             .+.+..+.+.|++..|
T Consensus        77 ~~~~-~~l~l~al~~~~~~~~~~~~~v~lv~GLP~~~~~~~ke~~~~~l~~~~~~~~~~~g~~~~i~I~~v~V~pQg~ga  155 (164)
T d2fsja2          77 SKEA-FPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGA  155 (164)
T ss_dssp             STTT-HHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHH
T ss_pred             CHHH-HHHHHHHHHHHhhhcCCCceeEEEEecCCHHHHHHHHHHHHHHhcCCCceEEeeCCeEEEEEEeEEEEecCCHHH
Confidence            3222 222223331111111 12223  44556776556677888777642             1234456666666665


Q ss_pred             cc
Q 017089          144 LY  145 (377)
Q Consensus       144 ~~  145 (377)
                      .+
T Consensus       156 ~~  157 (164)
T d2fsja2         156 AL  157 (164)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.10  E-value=0.05  Score=43.03  Aligned_cols=40  Identities=20%  Similarity=0.174  Sum_probs=34.1

Q ss_pred             ceEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHH
Q 017089          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL  191 (377)
Q Consensus       150 ~~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l  191 (377)
                      .+++|+|+|+++|.++-+-++.+.  ....+++|.-.+++.+
T Consensus         3 ~~~lviDIGGGStEli~~~~~~i~--~~~Sl~lG~vrl~e~f   42 (180)
T d1t6ca2           3 GEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNLTETF   42 (180)
T ss_dssp             SEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHHHHHH
T ss_pred             CCEEEEEeCCChHhhEEeeCCcee--eEEEeecceEEeeccc
Confidence            478999999999999999899887  6678999987776655

>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Escherichia coli [TaxId: 562]

Probab=92.75  E-value=0.072  Score=41.79  Aligned_cols=39  Identities=13%  Similarity=0.102  Sum_probs=32.7

Q ss_pred             eEEEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHH
Q 017089          151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL  191 (377)
Q Consensus       151 ~~lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l  191 (377)
                      ..||+|+|+++|.++.+.++.+.  ....+|+|.-.+++.+
T Consensus         3 r~Lv~DIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~~   41 (177)
T d1u6za3           3 RKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLY   41 (177)
T ss_dssp             CEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHH
T ss_pred             CEEEEEeCCChhheEEEECCcEe--EEEEeccceEEeeccc
Confidence            57999999999999999888887  5678999987665554

>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Hydroxyglutaryl-CoA dehydratase component A
species: Acidaminococcus fermentans [TaxId: 905]

Probab=92.16  E-value=0.029  Score=46.70  Aligned_cols=47  Identities=17%  Similarity=0.410  Sum_probs=38.3

Q ss_pred             cCcccccCCcCCcChHHHHHHHHHhhCCCCceEEEECCCCCccccchhhhhhhcc
Q 017089          297 GNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       297 ~nIil~GG~s~i~gl~~rl~~eL~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.||+.||.++.++|.++|++.|        +.++..++.+..+.-+||+++|.-
T Consensus       209 ~~Iv~gGGv~~~~~~~~~l~~~l--------~~~i~~~~~~~~agaiGAA~lA~~  255 (259)
T d1huxa_         209 KDVVMTGGVAQNYGVRGALEEGL--------GVEIKTSPLAQYNGALGAALYAYK  255 (259)
T ss_dssp             SSEEEESGGGGCHHHHHHHHHHH--------CSCEECCGGGGGHHHHHHHHHHHH
T ss_pred             CcEEEEccccccHHHHHHHHHHH--------CCCEEcCCCccHHHHHHHHHHHHH
Confidence            45999999999999999998887        235677777788888999998864

>d2zgya1 c.55.1.1 (A:1-157) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Plasmid segregation protein ParM
species: Escherichia coli [TaxId: 562]

Probab=90.25  E-value=0.11  Score=40.02  Aligned_cols=130  Identities=13%  Similarity=0.067  Sum_probs=62.3

Q ss_pred             cEEEeCCCCceEEeeeCCC--CCCCCCCceeEecCCCC------ccccCCCcceeeccchhcccCcceeeccccCCccCC
Q 017089            9 PLVCDNGTGMVKAGFAGDD--APRAVFPSIVGRPRHTG------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN   80 (377)
Q Consensus         9 ~vviD~Gs~~~k~G~~~~~--~P~~~~p~~~~~~~~~~------~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~d   80 (377)
                      .|.||.|..++|+.+...+  .+....|+.........      .....++..+.+|+.+......       .+..-..
T Consensus         2 ~I~iD~Gy~nvK~a~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~y~v~G~~Y~vG~~~~~~~~t-------~~~dy~~   74 (157)
T d2zgya1           2 LVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPDAVVT-------TNIAWQY   74 (157)
T ss_dssp             EEEEEECSSEEEEEEECSSSCEEEEEEECCEESSCCCCSSSCCCCEEEETTEEEEECTTCBSCCCS-------CCSGGGG
T ss_pred             EEEEecCCCcEEEEEecCCCcEeEEEeccccccccccccCCCceEEEEECCEEEEEcCCccccccc-------ccccccc
Confidence            4789999999998765422  22233344332211110      0011123444555543221100       0100011


Q ss_pred             HHHHHHHHHHhcccccccCCCCCcEEEeeCCC--C------CHHhHHHHHhhccc--------cCCCCeEEeeecccccc
Q 017089           81 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL--N------PKANREKMTQIMFE--------TFNTPAMYVAIQAVLSL  144 (377)
Q Consensus        81 ~~~~~~~~~~~~~~~L~~~~~~~~vvl~~~~~--~------~~~~~~~l~~~lfe--------~~~~~~v~~~~~~~~a~  144 (377)
                      .+....++.+++ ...+.++.+-.+++..|..  .      .+...+...+-++.        .+.+..|.+.|++++|.
T Consensus        75 ~~~~~ali~~aL-~~~~~~~~~v~~~~glp~~~f~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~I~~V~V~Pq~~~A~  153 (157)
T d2zgya1          75 SDVNVVAVHHAL-LTSGLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAG  153 (157)
T ss_dssp             SHHHHHHHHHHH-HHHSCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHH
T ss_pred             cHHHHHHHHHHH-HHcCCCCCcEEEEecCCHHHHhhhhhHHHHHHHHhhhcccceeeecCCeEEEEEEEEEEEeCcHHhh
Confidence            233445555665 3344445444566667742  1      12223333333432        35568899999999987


Q ss_pred             cc
Q 017089          145 YA  146 (377)
Q Consensus       145 ~~  146 (377)
                      |.
T Consensus       154 ~~  155 (157)
T d2zgya1         154 YE  155 (157)
T ss_dssp             HH
T ss_pred             hc
Confidence            74

>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Probable N-acetylglucosamine kinase CV2896
species: Chromobacterium violaceum [TaxId: 536]

Probab=86.38  E-value=1.3  Score=31.22  Aligned_cols=62  Identities=8%  Similarity=0.126  Sum_probs=38.1

Q ss_pred             HHHHHHHHHHhcccccccCCCCCc---EEEeeCCCCCHHhHHHHHhhccccCCCCeEEeeecccccccc
Q 017089           81 WDDMEKIWHHTFYNELRVAPEEHP---VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA  146 (377)
Q Consensus        81 ~~~~~~~~~~~~~~~L~~~~~~~~---vvl~~~~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~  146 (377)
                      |+.+.+.++.++ +..+....+..   +.+..+.......+..+.+.+   ..+..+.+.++..+|+++
T Consensus        46 ~~~i~~~i~~~~-~~ag~~~~~~~~~~~~~g~aG~~~~~~~~~l~~~~---~~~~~v~v~nDa~~A~~g  110 (114)
T d1zc6a1          46 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGEFESQA---PGFARLSLATDGYTTLLG  110 (114)
T ss_dssp             HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHHHHHTC---CCCSEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHcCCChhhhceeEEEEEecCCCcHHHHHHHHHhC---CCCCeEEEECHHHHHHHH
Confidence            445555555555 34444444432   445566666667767666544   344689999999988875

>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor large subunit DdrA {Klebsiella oxytoca [TaxId: 571]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ATPase domain of dehydratase reactivase alpha subunit
domain: Diol dehydratase-reactivating factor large subunit DdrA
species: Klebsiella oxytoca [TaxId: 571]

Probab=84.19  E-value=1.2  Score=34.02  Aligned_cols=55  Identities=24%  Similarity=0.308  Sum_probs=39.7

Q ss_pred             EEEeCCCCceEEEEeeCCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHh
Q 017089          153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEK  217 (377)
Q Consensus       153 lVVDiG~~~t~i~~v~~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~  217 (377)
                      -|+|+|+++|+.+.|-..-.+  ....+.=.|+.++-.+..-|   |.     .+...+|++|+.
T Consensus         7 AIlDlGaGStDAsii~~~g~v--~a~HlAGAG~mVTmlI~seL---Gl-----~d~~lAE~IKky   61 (203)
T d2d0oa3           7 AILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMIIAREL---GL-----EDRYLAEEIKKY   61 (203)
T ss_dssp             EEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHHHHHHH---TC-----CCHHHHHHHHHS
T ss_pred             EEEEcCCCcccHHHhCCCCcE--EEEEecCcchHhHHHHHHhh---CC-----CcHHHHHHHhhc
Confidence            478999999999877533233  23445667899998888777   22     257889999974

>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ATPase domain of dehydratase reactivase alpha subunit
domain: ATPase domain of the glycerol dehydratase reactivase alpha subunit
species: Klebsiella pneumoniae [TaxId: 573]

Probab=81.64  E-value=1.7  Score=33.09  Aligned_cols=54  Identities=22%  Similarity=0.323  Sum_probs=39.9

Q ss_pred             EEEeCCCCceEEEEee-CCcccccceEEecccHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHh
Q 017089          153 IVLDSGDGVSHTVPIY-EGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEK  217 (377)
Q Consensus       153 lVVDiG~~~t~i~~v~-~g~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~  217 (377)
                      -|+|+|+++|+.+.|- +|.+.   .....=.|+.++-.+..-|   |.     .+...+|++|+.
T Consensus         7 aIlDlG~GStDasii~~~g~v~---avhlAGAG~mVTmlI~~eL---Gl-----~d~~lAE~IKky   61 (202)
T d1nbwa3           7 AILDLGAGSTDAAIVNAEGQIT---AVHLAGAGNMVSLLIKTEL---GL-----EDLSLAEAIKKY   61 (202)
T ss_dssp             EEEEECSSEEEEEEECSSSCEE---EEEEECCHHHHHHHHHHHH---TC-----SCHHHHHHHHHS
T ss_pred             EEEEcCCCccchhhccCCCcEE---EEEecCCchhhHHHHHHHh---CC-----CcHHHHHHHhhc
Confidence            4789999999998775 45443   3445667999999888777   22     256889999974

>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Glucokinase
domain: Glucokinase Glk
species: Escherichia coli [TaxId: 562]

Probab=80.92  E-value=0.81  Score=32.15  Aligned_cols=23  Identities=9%  Similarity=-0.044  Sum_probs=19.3

Q ss_pred             ccccCCCCeEEeeeccccccccc
Q 017089          125 MFETFNTPAMYVAIQAVLSLYAS  147 (377)
Q Consensus       125 lfe~~~~~~v~~~~~~~~a~~~~  147 (377)
                      +.+.++.+.|.+.++.-|++|+.
T Consensus        85 l~~~~~~~~v~v~NDa~AaA~gi  107 (110)
T d1q18a1          85 MKKNLGFSHLEIINDFTAVSMAI  107 (110)
T ss_dssp             HHHHTTCSEEEEEEHHHHHHHHG
T ss_pred             HHHHhCCCcEEEEehHHHHhccc
Confidence            34678889999999999999875