Citrus Sinensis ID: 017102

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------
Protein Sequence
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF
Secondary Structure (PSIPRED)
cccccccccEEEEcccccEEEccccccccccccccccccccccccccccccccccccHHHHHccccEEEcccccccccccHHHHHHHHHHHHcccccccccccccEEcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccEEEEEcccccEEEEEccccccccccEEEEEccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccEEcccHHHHHHHHccccccccEEEcccccEEEEcccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHccEEEEccccccccHHHHHHHHHHHcccccccEEEEcccccccccccccHHcccccccccccEEcccccccccccEEcccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEEcccEEEEEEcccccccEEEEccEEEEccccccccccccccEEcHHHHHcHHHEEEEccEEccEEccHHHHHHHHHHHHHccccccHHHccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHcccccEEEEEEccccEEEEEEEccEEcHHHcEEEcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHcccccccccEEEEcccccEEEEccHHHHcHHHHccHHHHccccccHHHHHHHHHHcccHHHHHHHHccEEEEcHHHccccHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHcHHHHHccEEHHHHHHHcHHHHHHHcc
Coil and Loop (DISEMBL)
madtediqplvcdngtgmvkagfagddapravfpsivgrprhtgvmvgmgqkdayvgdeaqskrgiltlkypiehgivsnwddmEKIWHHTFYNelrvapeehpillteaplnpkanREKMTQIMFETFNAPAMYVAIQAVLSLYASGrttgivldsgdgvshtvpiyegyalpHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVeksyelpdgqvitigaerfrcpevlfqpsmigmesagihettynsimkcdvdirKDLYGNivlsggstmfpgiADRMSKEIsalapssmkikvvapperkysVWIGGSILASLSTFQQMWIAKseydesgpsivhrkcf
Flexible Loop (DISEMBL)
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILtergysftttaerEIVRDMKEKLAYIALDYEQELETaktssaveksyelpdGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKseydesgpsivhrkcf
Low Complexity Region (SEG)
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF
Disordered region (IsUnstruct)
*********LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAP********KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELE**********SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR*************KIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK****************
Disordered Region (DISOPRED)
****EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM*GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYE***************YELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF
Disordered Region (DISEMBL)
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY*************
Disordered Region (DISPRO)
******IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	377	2.2.26 [Sep-21-2011]
O81221	377	Actin OS=Gossypium hirsut	N/A	no	1.0	1.0	0.970	0.0
P0CJ47	377	Actin-3 OS=Arabidopsis th	yes	no	1.0	1.0	0.968	0.0
P0CJ46	377	Actin-1 OS=Arabidopsis th	yes	no	1.0	1.0	0.968	0.0
P30171	377	Actin-97 OS=Solanum tuber	N/A	no	1.0	1.0	0.965	0.0
Q10DV7	377	Actin-1 OS=Oryza sativa s	yes	no	1.0	1.0	0.965	0.0
A2XLF2	377	Actin-1 OS=Oryza sativa s	N/A	no	1.0	1.0	0.965	0.0
Q05214	377	Actin OS=Nicotiana tabacu	N/A	no	1.0	1.0	0.962	0.0
P46258	377	Actin-3 OS=Pisum sativum	N/A	no	1.0	1.0	0.962	0.0
P53492	377	Actin-7 OS=Arabidopsis th	yes	no	1.0	1.0	0.960	0.0
Q10AZ4	377	Actin-3 OS=Oryza sativa s	yes	no	1.0	1.0	0.962	0.0

>sp|O81221|ACT_GOSHI Actin OS=Gossypium hirsutum PE=3 SV=1

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/377 (97%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKLAYIALDYEQELET+KTSS++EK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSSIEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
Gossypium hirsutum (taxid: 3635)

>sp|P0CJ47|ACT3_ARATH Actin-3 OS=Arabidopsis thaliana GN=ACT3 PE=1 SV=1

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/377 (96%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIG+ERFRCPEVL+QPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins.

Arabidopsis thaliana (taxid: 3702)

>sp|P0CJ46|ACT1_ARATH Actin-1 OS=Arabidopsis thaliana GN=ACT1 PE=1 SV=1

 Score =  766 bits (1979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/377 (96%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIG+ERFRCPEVL+QPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins.

Arabidopsis thaliana (taxid: 3702)

>sp|P30171|ACT11_SOLTU Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/377 (96%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH+GVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHSGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD+LMKILTERGYSFTT+AEREIVRD+KEKLAYIALDYEQELET+KTSS+VEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Solanum tuberosum (taxid: 4113)

>sp|Q10DV7|ACT1_ORYSJ Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/377 (96%), Positives = 373/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+YIALDY+QE+ETAKTSS+VEK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPS IGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2XLF2|ACT1_ORYSI Actin-1 OS=Oryza sativa subsp. indica GN=ACT1 PE=2 SV=1

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/377 (96%), Positives = 373/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+YIALDY+QE+ETAKTSS+VEK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPS IGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q05214|ACT1_TOBAC Actin OS=Nicotiana tabacum PE=3 SV=1

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/377 (96%), Positives = 373/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+YIALD+EQE+ET+KTSS+VEK
Sbjct: 181 DLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFEQEMETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYG IV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGKIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Nicotiana tabacum (taxid: 4097)

>sp|P46258|ACT3_PEA Actin-3 OS=Pisum sativum PE=2 SV=1

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/377 (96%), Positives = 371/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA+ EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAEAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGY+FTT+AEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK
Sbjct: 181 DLAGRDLTDGLMKILTERGYTFTTSAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIGAERFRCPEV  QPSMIGMES GIHETT+NSIMKCDVDIRKDLYGNIV
Sbjct: 241 TYELPDGQVITIGAERFRCPEVTVQPSMIGMESPGIHETTFNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.

Pisum sativum (taxid: 3888)

>sp|P53492|ACT7_ARATH Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1

 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/377 (96%), Positives = 373/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD+LMKILTERGY FTTTAEREIVRD+KEKLAY+ALDYEQELETAK+SS+VEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           +YELPDGQVITIGAERFRCPEVLFQPS+IGME+ GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 361 KSEYDESGPSIVHRKCF 377
           KSEYDESGPSIVHRKCF
Sbjct: 361 KSEYDESGPSIVHRKCF 377

Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the vegetative actins which is involved in the regulation of hormone-induced plant cell proliferation and callus formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q10AZ4|ACT3_ORYSJ Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1

 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/377 (96%), Positives = 373/377 (98%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKLAYIALDYEQELETAK+SS+VEK
Sbjct: 181 DLAGRDLTDCLMKILTERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPS+IGME+ GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K EYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377

Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
333595899	377	actin [Platycodon grandiflorus]	1.0	1.0	0.984	0.0
356874568	377	actin [Chrysanthemum seticuspe f. boreal	1.0	1.0	0.984	0.0
449448633	377	PREDICTED: actin-like [Cucumis sativus]	1.0	1.0	0.981	0.0
300484337	377	actin [Citrus maxima]	1.0	1.0	0.981	0.0
118481291	377	unknown [Populus trichocarpa]	1.0	1.0	0.981	0.0
224088196	377	actin 3 [Populus trichocarpa] gi|2241378	1.0	1.0	0.978	0.0
449437577	377	PREDICTED: actin-like [Cucumis sativus]	1.0	1.0	0.978	0.0
356550273	377	PREDICTED: actin-97-like [Glycine max]	1.0	1.0	0.978	0.0
356558127	377	PREDICTED: actin-like [Glycine max]	1.0	1.0	0.978	0.0
225441455	377	PREDICTED: actin [Vitis vinifera] gi|147	1.0	1.0	0.978	0.0

>gi|333595899|gb|AEF58501.1| actin [Platycodon grandiflorus]

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/377 (98%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Platycodon grandiflorus

Species: Platycodon grandiflorus

Genus: Platycodon

Family: Campanulaceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356874568|dbj|BAL14664.1| actin [Chrysanthemum seticuspe f. boreale]

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/377 (98%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Chrysanthemum seticuspe f. boreale

Species: Chrysanthemum seticuspe

Genus: Chrysanthemum

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448633|ref|XP_004142070.1| PREDICTED: actin-like [Cucumis sativus] gi|449516439|ref|XP_004165254.1| PREDICTED: actin-like [Cucumis sativus]

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/377 (98%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADNEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET+KTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300484337|gb|ADK20401.1| actin [Citrus maxima]

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/377 (98%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA+ EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAEAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Citrus maxima

Species: Citrus maxima

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481291|gb|ABK92589.1| unknown [Populus trichocarpa]

 Score =  775 bits (2001), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/377 (98%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD+LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET+KTSSAVEK
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088196|ref|XP_002308365.1| actin 3 [Populus trichocarpa] gi|224137838|ref|XP_002322664.1| actin 7 [Populus trichocarpa] gi|118481698|gb|ABK92789.1| unknown [Populus trichocarpa] gi|118483656|gb|ABK93722.1| unknown [Populus trichocarpa] gi|118487386|gb|ABK95521.1| unknown [Populus trichocarpa] gi|222854341|gb|EEE91888.1| actin 3 [Populus trichocarpa] gi|222867294|gb|EEF04425.1| actin 7 [Populus trichocarpa] gi|301331528|gb|ADK70741.1| actin [Populus tomentosa] gi|301331531|gb|ADK70742.1| actin [Populus tomentosa] gi|301331533|gb|ADK70743.1| actin [Populus tomentosa] gi|301331536|gb|ADK70744.1| actin [Populus tomentosa] gi|301331540|gb|ADK70745.1| actin [Populus tomentosa] gi|301331543|gb|ADK70746.1| actin [Populus tomentosa] gi|301331546|gb|ADK70747.1| actin [Populus tomentosa] gi|301331549|gb|ADK70748.1| actin [Populus tomentosa] gi|301331552|gb|ADK70749.1| actin [Populus tomentosa] gi|301331555|gb|ADK70750.1| actin [Populus tomentosa] gi|301331558|gb|ADK70751.1| actin [Populus tomentosa] gi|301331560|gb|ADK70752.1| actin [Populus tomentosa] gi|301331563|gb|ADK70753.1| actin [Populus tomentosa] gi|301331566|gb|ADK70754.1| actin [Populus tomentosa] gi|301331569|gb|ADK70755.1| actin [Populus tomentosa] gi|301331573|gb|ADK70756.1| actin [Populus tomentosa] gi|301331576|gb|ADK70757.1| actin [Populus tomentosa] gi|301331579|gb|ADK70758.1| actin [Populus tomentosa] gi|301331582|gb|ADK70759.1| actin [Populus tomentosa] gi|301331585|gb|ADK70760.1| actin [Populus tomentosa] gi|301331588|gb|ADK70761.1| actin [Populus tomentosa] gi|301331591|gb|ADK70762.1| actin [Populus tomentosa] gi|301331594|gb|ADK70763.1| actin [Populus tomentosa] gi|301331597|gb|ADK70764.1| actin [Populus tomentosa] gi|301331599|gb|ADK70765.1| actin [Populus tomentosa] gi|301331603|gb|ADK70766.1| actin [Populus tomentosa] gi|301331606|gb|ADK70767.1| actin [Populus tomentosa] gi|301331609|gb|ADK70768.1| actin [Populus tomentosa] gi|301331611|gb|ADK70769.1| actin [Populus tomentosa] gi|301331613|gb|ADK70770.1| actin [Populus tomentosa] gi|301331615|gb|ADK70771.1| actin [Populus tomentosa] gi|301331617|gb|ADK70772.1| actin [Populus tomentosa] gi|301331619|gb|ADK70773.1| actin [Populus tomentosa] gi|301331622|gb|ADK70774.1| actin [Populus tomentosa] gi|301331625|gb|ADK70775.1| actin [Populus tomentosa] gi|301331628|gb|ADK70776.1| actin [Populus tomentosa] gi|301331631|gb|ADK70777.1| actin [Populus tomentosa] gi|301331634|gb|ADK70778.1| actin [Populus tomentosa] gi|301331637|gb|ADK70779.1| actin [Populus tomentosa] gi|301331640|gb|ADK70780.1| actin [Populus tomentosa] gi|301331643|gb|ADK70781.1| actin [Populus tomentosa] gi|429326368|gb|AFZ78524.1| actin [Populus tomentosa]

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA++EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAESEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437577|ref|XP_004136568.1| PREDICTED: actin-like [Cucumis sativus] gi|449511328|ref|XP_004163927.1| PREDICTED: actin-like [Cucumis sativus]

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 376/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MAD+EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADSEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET+KTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356550273|ref|XP_003543512.1| PREDICTED: actin-97-like [Glycine max]

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAY+ALDYEQELET+KTSSAVEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYLALDYEQELETSKTSSAVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+ GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356558127|ref|XP_003547359.1| PREDICTED: actin-like [Glycine max]

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET+KTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+ GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAVGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K+EYDESGPSIVHRKCF
Sbjct: 361 KAEYDESGPSIVHRKCF 377

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441455|ref|XP_002279672.1| PREDICTED: actin [Vitis vinifera] gi|147776496|emb|CAN71887.1| hypothetical protein VITISV_040859 [Vitis vinifera]

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/377 (97%), Positives = 375/377 (99%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           MA+TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MAETEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS+VEK
Sbjct: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSSVEK 240

Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIGAERFRCPEVLFQPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct: 301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query: 361 KSEYDESGPSIVHRKCF 377
           K EYDESGPSIVHRKCF
Sbjct: 361 KGEYDESGPSIVHRKCF 377

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	377
TAIR|locus:2040656	377	ACT1 "AT2G37620" [Arabidopsis	1.0	1.0	0.968	2.3e-197
TAIR|locus:2084410	377	ACT3 "AT3G53750" [Arabidopsis	1.0	1.0	0.968	2.3e-197
TAIR|locus:2178128	377	ACT7 "actin 7" [Arabidopsis th	1.0	1.0	0.960	2.6e-196
TAIR|locus:2099302	377	ACT11 "AT3G12110" [Arabidopsis	1.0	1.0	0.957	7e-196
TAIR|locus:2075160	377	ACT12 "AT3G46520" [Arabidopsis	1.0	1.0	0.957	4.9e-195
TAIR|locus:2148298	377	ACT4 "actin 4" [Arabidopsis th	1.0	1.0	0.954	1.3e-194
TAIR|locus:2028416	377	ACT8 "AT1G49240" [Arabidopsis	1.0	1.0	0.909	4.7e-190
TAIR|locus:2093954	377	ACT2 "AT3G18780" [Arabidopsis	1.0	1.0	0.907	1.3e-189
DICTYBASE|DDB_G0289663	376	act5 "actin" [Dictyostelium di	0.994	0.997	0.904	4.4e-187
DICTYBASE|DDB_G0289553	376	act1 "actin" [Dictyostelium di	0.994	0.997	0.904	4.4e-187

TAIR|locus:2040656 ACT1 "AT2G37620" [Arabidopsis thaliana (taxid:3702)]

 Score = 1911 (677.8 bits), Expect = 2.3e-197, P = 2.3e-197
 Identities = 365/377 (96%), Positives = 375/377 (99%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELETAKTSS+VEK
Sbjct:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIG+ERFRCPEVL+QPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KSEYDESGPSIVHRKCF 377
             K+EYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=TAS

GO:0048589 "developmental growth" evidence=IMP

GO:0048767 "root hair elongation" evidence=IMP

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2084410 ACT3 "AT3G53750" [Arabidopsis thaliana (taxid:3702)]

 Score = 1911 (677.8 bits), Expect = 2.3e-197, P = 2.3e-197
 Identities = 365/377 (96%), Positives = 375/377 (99%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKL YIALDYEQELETAKTSS+VEK
Sbjct:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIG+ERFRCPEVL+QPSMIGME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KSEYDESGPSIVHRKCF 377
             K+EYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2178128 ACT7 "actin 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1901 (674.2 bits), Expect = 2.6e-196, P = 2.6e-196
 Identities = 362/377 (96%), Positives = 373/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD+LMKILTERGY FTTTAEREIVRD+KEKLAY+ALDYEQELETAK+SS+VEK
Sbjct:   181 DLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIGAERFRCPEVLFQPS+IGME+ GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGGSTMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct:   301 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query:   361 KSEYDESGPSIVHRKCF 377
             KSEYDESGPSIVHRKCF
Sbjct:   361 KSEYDESGPSIVHRKCF 377

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0007010 "cytoskeleton organization" evidence=RCA;TAS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009845 "seed germination" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0048767 "root hair elongation" evidence=RCA;IMP

GO:0051301 "cell division" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005856 "cytoskeleton" evidence=ISS

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

TAIR|locus:2099302 ACT11 "AT3G12110" [Arabidopsis thaliana (taxid:3702)]

 Score = 1897 (672.8 bits), Expect = 7.0e-196, P = 7.0e-196
 Identities = 361/377 (95%), Positives = 372/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKLAYIALDYEQE+ETA TSS+VEK
Sbjct:   181 DLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             SYELPDGQVITIG ERFRCPEVLFQPS++GME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 SYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMFPGIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KSEYDESGPSIVHRKCF 377
             K+EYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0030036 "actin cytoskeleton organization" evidence=TAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0005856 "cytoskeleton" evidence=ISS

TAIR|locus:2075160 ACT12 "AT3G46520" [Arabidopsis thaliana (taxid:3702)]

 Score = 1889 (670.0 bits), Expect = 4.9e-195, P = 4.9e-195
 Identities = 361/377 (95%), Positives = 371/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+YIALDYEQELET+KTSS+VEK
Sbjct:   181 DLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             S+ELPDGQVITIGAERFRCPEVLFQPSMIGME+ GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 SFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMF GI DRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KSEYDESGPSIVHRKCF 377
             K+EYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=TAS

GO:0007010 "cytoskeleton organization" evidence=RCA;TAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

TAIR|locus:2148298 ACT4 "actin 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 1885 (668.6 bits), Expect = 1.3e-194, P = 1.3e-194
 Identities = 360/377 (95%), Positives = 371/377 (98%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct:     1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct:   121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+YIALD+EQELET+KTSS+VEK
Sbjct:   181 DLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             S+ELPDGQVITIGAERFRCPEVLFQPSMIGME+ GIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 SFELPDGQVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMF GI DRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
Sbjct:   301 LSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360

Query:   361 KSEYDESGPSIVHRKCF 377
             K+EYDESGPSIVHRKCF
Sbjct:   361 KAEYDESGPSIVHRKCF 377

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0030036 "actin cytoskeleton organization" evidence=TAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

TAIR|locus:2028416 ACT8 "AT1G49240" [Arabidopsis thaliana (taxid:3702)]

 Score = 1842 (653.5 bits), Expect = 4.7e-190, P = 4.7e-190
 Identities = 343/377 (90%), Positives = 369/377 (97%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MAD +DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEA
Sbjct:     1 MADADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHP+LLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRL
Sbjct:   121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL+++A+DYEQE+ET+KTSS++EK
Sbjct:   181 DLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIGAERFRCPEVLFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct:   301 LSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query:   361 KSEYDESGPSIVHRKCF 377
             K+EYDE+GP IVHRKCF
Sbjct:   361 KAEYDEAGPGIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2093954 ACT2 "AT3G18780" [Arabidopsis thaliana (taxid:3702)]

 Score = 1838 (652.1 bits), Expect = 1.3e-189, P = 1.3e-189
 Identities = 342/377 (90%), Positives = 369/377 (97%)

Query:     1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
             MA+ +DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEA
Sbjct:     1 MAEADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEA 60

Query:    61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             QSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHP+LLTEAPLNPKANREK
Sbjct:    61 QSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREK 120

Query:   121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
             MTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRL
Sbjct:   121 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRL 180

Query:   181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
             DLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL+++A+DYEQE+ET+KTSS++EK
Sbjct:   181 DLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEK 240

Query:   241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
             +YELPDGQVITIGAERFRCPEVLFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGNIV
Sbjct:   241 NYELPDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV 300

Query:   301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
             LSGG+TMF GIADRMSKEI+ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+
Sbjct:   301 LSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 360

Query:   361 KSEYDESGPSIVHRKCF 377
             K+EYDE+GP IVHRKCF
Sbjct:   361 KAEYDEAGPGIVHRKCF 377

GO:0005200 "structural constituent of cytoskeleton" evidence=ISS;TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0048767 "root hair elongation" evidence=RCA;IMP

GO:0005634 "nucleus" evidence=IDA

GO:0010053 "root epidermal cell differentiation" evidence=IMP

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0010114 "response to red light" evidence=IEP

GO:0010218 "response to far red light" evidence=IEP

GO:0016020 "membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0048768 "root hair cell tip growth" evidence=IMP

GO:0005829 "cytosol" evidence=RCA

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0007010 "cytoskeleton organization" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010193 "response to ozone" evidence=RCA

GO:0010498 "proteasomal protein catabolic process" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0016051 "carbohydrate biosynthetic process" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

DICTYBASE|DDB_G0289663 act5 "actin" [Dictyostelium discoideum (taxid:44689)]

 Score = 1814 (643.6 bits), Expect = 4.4e-187, P = 4.4e-187
 Identities = 339/375 (90%), Positives = 363/375 (96%)

Query:     3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
             D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct:     2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 61

Query:    63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
             KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct:    62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121

Query:   123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
             QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct:   122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 181

Query:   183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
             AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct:   182 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 241

Query:   243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
             ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct:   242 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 301

Query:   303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
             GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct:   302 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 361

Query:   363 EYDESGPSIVHRKCF 377
             EYDESGPSIVHRKCF
Sbjct:   362 EYDESGPSIVHRKCF 376

GO:0006909 "phagocytosis" evidence=IEP

GO:0001891 "phagocytic cup" evidence=IDA

GO:0032010 "phagolysosome" evidence=IDA

GO:0032009 "early phagosome" evidence=IDA

GO:0006972 "hyperosmotic response" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0042331 "phototaxis" evidence=TAS

GO:0016192 "vesicle-mediated transport" evidence=TAS

GO:0006935 "chemotaxis" evidence=TAS

GO:0006928 "cellular component movement" evidence=TAS

GO:0006897 "endocytosis" evidence=TAS

GO:0000910 "cytokinesis" evidence=TAS

GO:0000902 "cell morphogenesis" evidence=TAS

GO:0031252 "cell leading edge" evidence=TAS

GO:0031143 "pseudopodium" evidence=TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0017022 "myosin binding" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0005884 "actin filament" evidence=IDA

GO:0005200 "structural constituent of cytoskeleton" evidence=IDA

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0289553 act1 "actin" [Dictyostelium discoideum (taxid:44689)]

 Score = 1814 (643.6 bits), Expect = 4.4e-187, P = 4.4e-187
 Identities = 339/375 (90%), Positives = 363/375 (96%)

Query:     3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
             D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct:     2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 61

Query:    63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
             KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct:    62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121

Query:   123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
             QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct:   122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 181

Query:   183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
             AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct:   182 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 241

Query:   243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
             ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct:   242 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 301

Query:   303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
             GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct:   302 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 361

Query:   363 EYDESGPSIVHRKCF 377
             EYDESGPSIVHRKCF
Sbjct:   362 EYDESGPSIVHRKCF 376

GO:0006909 "phagocytosis" evidence=IEP

GO:0001891 "phagocytic cup" evidence=IDA

GO:0032010 "phagolysosome" evidence=IDA

GO:0032009 "early phagosome" evidence=IDA

GO:0006972 "hyperosmotic response" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

GO:0006897 "endocytosis" evidence=TAS

GO:0000910 "cytokinesis" evidence=TAS

GO:0000902 "cell morphogenesis" evidence=TAS

GO:0042331 "phototaxis" evidence=TAS

GO:0016192 "vesicle-mediated transport" evidence=TAS

GO:0006935 "chemotaxis" evidence=TAS

GO:0006928 "cellular component movement" evidence=TAS

GO:0031252 "cell leading edge" evidence=TAS

GO:0031143 "pseudopodium" evidence=TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005884 "actin filament" evidence=IDA

GO:0005200 "structural constituent of cytoskeleton" evidence=IDA

GO:0017022 "myosin binding" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IDA

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0044351 "macropinocytosis" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q93131	ACTC_BRAFL	No assigned EC number	0.8927	0.9893	0.9946	yes	no
P02580	ACT3_SOYBN	No assigned EC number	0.9177	0.9973	1.0	no	no
P0CJ47	ACT3_ARATH	No assigned EC number	0.9681	1.0	1.0	yes	no
P0CJ46	ACT1_ARATH	No assigned EC number	0.9681	1.0	1.0	yes	no
P17126	ACT_HYDVU	No assigned EC number	0.8992	0.9973	1.0	N/A	no
A3C6D7	ACT2_ORYSJ	No assigned EC number	0.9496	1.0	1.0	no	no
Q964E2	ACTC_BIOPF	No assigned EC number	0.8981	0.9893	0.9920	N/A	no
P07829	ACT3_DICDI	No assigned EC number	0.888	0.9946	0.9973	yes	no
Q964E1	ACTC_BIOOB	No assigned EC number	0.8954	0.9893	0.9920	N/A	no
P53461	ACTC_HALRO	No assigned EC number	0.9008	0.9893	0.9920	N/A	no
P30168	ACT6_SOLTU	No assigned EC number	0.9389	1.0	1.0	N/A	no
O81221	ACT_GOSHI	No assigned EC number	0.9708	1.0	1.0	N/A	no
P30167	ACT3_SOLTU	No assigned EC number	0.9549	1.0	1.0	N/A	no
P30164	ACT1_PEA	No assigned EC number	0.9469	0.9973	1.0	N/A	no
P30165	ACT2_PEA	No assigned EC number	0.9416	0.9973	1.0	N/A	no
P41113	ACT3_PODCA	No assigned EC number	0.8965	0.9973	1.0	N/A	no
P46258	ACT3_PEA	No assigned EC number	0.9628	1.0	1.0	N/A	no
Q05214	ACT1_TOBAC	No assigned EC number	0.9628	1.0	1.0	N/A	no
P02578	ACT1_ACACA	No assigned EC number	0.9008	0.9893	0.9946	N/A	no
P23343	ACT1_DAUCA	No assigned EC number	0.9285	0.9973	0.9894	N/A	no
P12716	ACTC_PISOC	No assigned EC number	0.8981	0.9893	0.9920	N/A	no
P0C539	ACT2_ORYSI	No assigned EC number	0.9496	1.0	1.0	N/A	no
P53504	ACT1_SORBI	No assigned EC number	0.9496	1.0	1.0	N/A	no
Q10DV7	ACT1_ORYSJ	No assigned EC number	0.9655	1.0	1.0	yes	no
O65316	ACT_MESVI	No assigned EC number	0.9177	1.0	1.0	N/A	no
P30172	ACT12_SOLTU	No assigned EC number	0.9579	0.9469	1.0	N/A	no
Q553U6	ACT22_DICDI	No assigned EC number	0.8986	0.9946	0.9973	yes	no
Q96293	ACT8_ARATH	No assigned EC number	0.9098	1.0	1.0	no	no
Q96292	ACT2_ARATH	No assigned EC number	0.9071	1.0	1.0	no	no
Q964E3	ACTC_BIOAL	No assigned EC number	0.8927	0.9893	0.9920	N/A	no
O65315	ACT_COLSC	No assigned EC number	0.9204	1.0	1.0	N/A	no
Q93129	ACTC_BRABE	No assigned EC number	0.8927	0.9893	0.9946	N/A	no
P20904	ACT_VOLCA	No assigned EC number	0.8912	1.0	1.0	N/A	no
P53471	ACT2_SCHMA	No assigned EC number	0.8912	0.9973	1.0	N/A	no
P53498	ACT_CHLRE	No assigned EC number	0.8992	1.0	1.0	N/A	no
P53494	ACT4_ARATH	No assigned EC number	0.9549	1.0	1.0	yes	no
P53497	ACT12_ARATH	No assigned EC number	0.9575	1.0	1.0	yes	no
P53496	ACT11_ARATH	No assigned EC number	0.9575	1.0	1.0	yes	no
P30171	ACT11_SOLTU	No assigned EC number	0.9655	1.0	1.0	N/A	no
P30173	ACT13_SOLTU	No assigned EC number	0.9549	1.0	1.0	N/A	no
P53492	ACT7_ARATH	No assigned EC number	0.9602	1.0	1.0	yes	no
Q54GX7	ACT10_DICDI	No assigned EC number	0.9061	0.9893	0.9920	yes	no
Q10AZ4	ACT3_ORYSJ	No assigned EC number	0.9628	1.0	1.0	yes	no
A2XNS1	ACT3_ORYSI	No assigned EC number	0.9628	1.0	1.0	N/A	no
P0C542	ACT7_ORYSI	No assigned EC number	0.9276	0.9893	0.9920	N/A	no
P0C540	ACT7_ORYSJ	No assigned EC number	0.9276	0.9893	0.9920	no	no
A2XLF2	ACT1_ORYSI	No assigned EC number	0.9655	1.0	1.0	N/A	no
P07830	ACT1_DICDI	No assigned EC number	0.904	0.9946	0.9973	yes	no
P02576	ACTA_PHYPO	No assigned EC number	0.9115	0.9893	0.9920	N/A	no
Q964E0	ACTC_BIOTE	No assigned EC number	0.8954	0.9893	0.9920	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	377
PTZ00281	376	PTZ00281, PTZ00281, actin; Provisional	0.0
PTZ00004	378	PTZ00004, PTZ00004, actin-2; Provisional	0.0
pfam00022	367	pfam00022, Actin, Actin	0.0
smart00268	373	smart00268, ACTIN, Actin	0.0
PTZ00466	380	PTZ00466, PTZ00466, actin-like protein; Provisiona	1e-171
PTZ00452	375	PTZ00452, PTZ00452, actin; Provisional	1e-167
COG5277	444	COG5277, COG5277, Actin and related proteins [Cyto	1e-157
PTZ00280	414	PTZ00280, PTZ00280, Actin-related protein 3; Provi	1e-114
cd00012	185	cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-	3e-17

>gnl|CDD|173506 PTZ00281, PTZ00281, actin; Provisional

 Score =  727 bits (1878), Expect = 0.0
 Identities = 338/374 (90%), Positives = 362/374 (96%)

Query: 4   TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
            ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSK
Sbjct: 3   GEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK 62

Query: 64  RGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQ 123
           RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 124 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
           IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLA 182

Query: 184 GRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE 243
           GRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSYE
Sbjct: 183 GRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYE 242

Query: 244 LPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSG 303
           LPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLSG
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSG 302

Query: 304 GSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSE 363
           G+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K E
Sbjct: 303 GTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 362

Query: 364 YDESGPSIVHRKCF 377
           YDESGPSIVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376

Length = 376

>gnl|CDD|240225 PTZ00004, PTZ00004, actin-2; Provisional

 Score =  669 bits (1729), Expect = 0.0
 Identities = 299/379 (78%), Positives = 339/379 (89%), Gaps = 3/379 (0%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           M+  E+    V DNG+GMVKAGFAGDDAPR VFPSIVGRP++ G+MVGM +KD YVGDEA
Sbjct: 1   MSV-EETNAAVVDNGSGMVKAGFAGDDAPRCVFPSIVGRPKNPGIMVGMEEKDCYVGDEA 59

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           Q KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 60  QDKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFET N PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY+LPHAI RL
Sbjct: 120 MTQIMFETHNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYSLPHAIHRL 179

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL-ETAKTSSAVE 239
           D+AGRDLT+ +MKIL ERG +FTTTAE+EIVRD+KEKL YIALD+++E+  +A +S   E
Sbjct: 180 DVAGRDLTEYMMKILHERGTTFTTTAEKEIVRDIKEKLCYIALDFDEEMGNSAGSSDKYE 239

Query: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMESA-GIHETTYNSIMKCDVDIRKDLYGN 298
           +SYELPDG +IT+G+ERFRCPE LFQPS+IG E   GIHE T+ SI KCD+DIRKDLYGN
Sbjct: 240 ESYELPDGTIITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDIDIRKDLYGN 299

Query: 299 IVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMW 358
           IVLSGG+TM+ G+ +R++KE++ LAPS+MKIKVVAPPERKYSVWIGGSIL+SL TFQQMW
Sbjct: 300 IVLSGGTTMYRGLPERLTKELTTLAPSTMKIKVVAPPERKYSVWIGGSILSSLPTFQQMW 359

Query: 359 IAKSEYDESGPSIVHRKCF 377
           + K EYDESGPSIVHRKCF
Sbjct: 360 VTKEEYDESGPSIVHRKCF 378

Length = 378

>gnl|CDD|200935 pfam00022, Actin, Actin

 Score =  644 bits (1664), Expect = 0.0
 Identities = 238/374 (63%), Positives = 284/374 (75%), Gaps = 8/374 (2%)

Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +++  LV DNG+G  KAGFAG+DAPRAV PS+VGRPR  GVMV       YVGDEA SKR
Sbjct: 1   DEVSALVIDNGSGTTKAGFAGEDAPRAVIPSVVGRPRGRGVMV-----KYYVGDEALSKR 55

Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
             L ++YPIE GIV NWD MEKIW HTF+ ELRV PEEHP+LLTE PLNP ANREK T+I
Sbjct: 56  PGLEVRYPIEDGIVENWDAMEKIWEHTFFEELRVDPEEHPLLLTEPPLNPPANREKATEI 115

Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETF  PA+Y+A QAVLS YASGRTTG+V+DSG GV+  VP+YEGY L  AI R DLAG
Sbjct: 116 MFETFGVPALYLAKQAVLSAYASGRTTGLVVDSGAGVTSVVPVYEGYVLQKAIRRSDLAG 175

Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
            DLTD L K+L+ R YSF T AE E+VRD+KE L Y++ D   +   +  SS    SYEL
Sbjct: 176 DDLTDYLRKLLSSRTYSFNTYAEEEVVRDIKESLCYVSDDPFGDTAAS--SSPPTVSYEL 233

Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDG VI +G ERFR PE+LF PS+IG ESAGI E  Y+SI  CDVD+R  L  NIV++GG
Sbjct: 234 PDGYVIILGNERFRVPEILFNPSLIGSESAGIPELIYDSINACDVDLRPSLLANIVVTGG 293

Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPP-ERKYSVWIGGSILASLSTFQQMWIAKSE 363
           +T+FPG  +R+ KE++ LAPS +K+K++APP ERKYS WIGGSILASL TFQQMW++K E
Sbjct: 294 TTLFPGFTERLEKELAQLAPSGVKVKIIAPPNERKYSAWIGGSILASLGTFQQMWVSKQE 353

Query: 364 YDESGPSIVHRKCF 377
           Y+E G S+V RKCF
Sbjct: 354 YEEHGSSVVERKCF 367

Length = 367

>gnl|CDD|214592 smart00268, ACTIN, Actin

 Score =  627 bits (1619), Expect = 0.0
 Identities = 249/373 (66%), Positives = 305/373 (81%), Gaps = 4/373 (1%)

Query: 8   QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
             +V DNG+G +KAGFAG+D P+ VFPSIVGRP+    MVG   KD +VGDEAQ KRG L
Sbjct: 2   PAIVIDNGSGTIKAGFAGEDFPQVVFPSIVGRPKDGKGMVG-DAKDIFVGDEAQEKRGGL 60

Query: 68  TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFE 127
            LKYPIE+GIV NWDDMEKIW +TF+NELRV PEEHP+LLTE P+NPK+NREK+ +IMFE
Sbjct: 61  ELKYPIENGIVENWDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFE 120

Query: 128 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187
           TFN PA+Y+AIQAVLSLYASGRTTG+V+DSGDGV+H VP+ +GY LPHAI R+D+AGRD+
Sbjct: 121 TFNFPALYIAIQAVLSLYASGRTTGLVIDSGDGVTHVVPVVDGYVLPHAIKRIDIAGRDI 180

Query: 188 TDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKT---SSAVEKSYEL 244
           TD L ++L+ERGY F ++AE EIVR++KEKL Y+A D+E+E++ A+    SS +EK+YEL
Sbjct: 181 TDYLKELLSERGYQFNSSAEFEIVREIKEKLCYVAEDFEKEMKLARESSESSKLEKTYEL 240

Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDG  I +G ERFR PE+LF P +IG+E  GIHE  Y SI KCD+D+RKDLY NIVLSGG
Sbjct: 241 PDGNTIKVGNERFRIPEILFSPELIGLEQKGIHELVYESIQKCDIDVRKDLYENIVLSGG 300

Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           ST+ PG  +R+ KE+  LAP  +K+KV+APPERKYSVW+GGSILASLSTF+ MWI K EY
Sbjct: 301 STLIPGFGERLEKELKQLAPKKLKVKVIAPPERKYSVWLGGSILASLSTFEDMWITKKEY 360

Query: 365 DESGPSIVHRKCF 377
           +ESG  IV RKCF
Sbjct: 361 EESGSQIVERKCF 373

ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily. Length = 373

>gnl|CDD|240426 PTZ00466, PTZ00466, actin-like protein; Provisional

 Score =  480 bits (1238), Expect = e-171
 Identities = 193/370 (52%), Positives = 269/370 (72%), Gaps = 2/370 (0%)

Query: 8   QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
           QP++ DNGTG +KAGFAG+D P  VFPS VGRP++  VM G  + + +VG++A+  RG+L
Sbjct: 13  QPIIIDNGTGYIKAGFAGEDVPNLVFPSYVGRPKYKRVMAGAVEGNIFVGNKAEEYRGLL 72

Query: 68  TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFE 127
            + YPI HGI+ NW+DME IW H  YN +++  EEHP+LLTEAPLNP+ N+EK+ ++ FE
Sbjct: 73  KVTYPINHGIIENWNDMENIWIHV-YNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFE 131

Query: 128 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 187
           TFN PA++++IQA+LSLY+ G+T G VLD GDGV H V IYEGY++ + I R D+AGRD+
Sbjct: 132 TFNVPALFISIQAILSLYSCGKTNGTVLDCGDGVCHCVSIYEGYSITNTITRTDVAGRDI 191

Query: 188 TDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDG 247
           T  L  +L + G+ F T+AE E+V++MKE   Y++ +  +E + +   +     Y LPDG
Sbjct: 192 TTYLGYLLRKNGHLFNTSAEMEVVKNMKENCCYVSFNMNKE-KNSSEKALTTLPYILPDG 250

Query: 248 QVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTM 307
             I IG+ER+R PEVLF PS++G+E  G+ E    SI + D+D+R+ LY +IVLSGG+TM
Sbjct: 251 SQILIGSERYRAPEVLFNPSILGLEYLGLSELIVTSITRADMDLRRTLYSHIVLSGGTTM 310

Query: 308 FPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDES 367
           F G  DR+  EI   AP  + I++ APPERK+S +IGGSILASL+TF+++WI+K E+DE 
Sbjct: 311 FHGFGDRLLNEIRKFAPKDITIRISAPPERKFSTFIGGSILASLATFKKIWISKQEFDEY 370

Query: 368 GPSIVHRKCF 377
           G  I+HRK F
Sbjct: 371 GSVILHRKTF 380

Length = 380

>gnl|CDD|185631 PTZ00452, PTZ00452, actin; Provisional

 Score =  471 bits (1213), Expect = e-167
 Identities = 206/368 (55%), Positives = 284/368 (77%)

Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           +V DNG+G  K G AGDDAP + FP+IVGR +    +     K+ YVG+EAQ+KRG+L +
Sbjct: 8   VVIDNGSGYCKIGIAGDDAPTSCFPAIVGRSKQNDGIFSTFNKEYYVGEEAQAKRGVLAI 67

Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           K PI++GI+++WDD+E IWHH FYNEL ++PE+ P+ +T+AP+N K NRE+MTQIMFETF
Sbjct: 68  KEPIQNGIINSWDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETF 127

Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N P +Y++ +AVLSLY SG+T G+V+DSG+GV+H VP++EG+ +P AI +++LAGR  TD
Sbjct: 128 NTPCLYISNEAVLSLYTSGKTIGLVVDSGEGVTHCVPVFEGHQIPQAITKINLAGRLCTD 187

Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            L +IL E GYS T   +R IV+++KE+L Y ALD + E    K S++ +  Y+LPDG +
Sbjct: 188 YLTQILQELGYSLTEPHQRIIVKNIKERLCYTALDPQDEKRIYKESNSQDSPYKLPDGNI 247

Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           +TI +++FRC E+LFQP +IG+E AGIH   Y+SI KCD+D+R++L  NIVLSGG+T+FP
Sbjct: 248 LTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELCRNIVLSGGTTLFP 307

Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIA+R+S E++ L PS +KI+V APP+R++S WIGGSI  +LST Q  WI + EYDE GP
Sbjct: 308 GIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCTLSTQQPQWIKRQEYDEQGP 367

Query: 370 SIVHRKCF 377
           SIVHRKCF
Sbjct: 368 SIVHRKCF 375

Length = 375

>gnl|CDD|227602 COG5277, COG5277, Actin and related proteins [Cytoskeleton]

 Score =  448 bits (1154), Expect = e-157
 Identities = 206/443 (46%), Positives = 277/443 (62%), Gaps = 69/443 (15%)

Query: 4   TEDIQP-LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQ 61
           T D  P +V DNG+G  KAGFAG+D P  VFPSIVGR R    VM    +KD YVG+EAQ
Sbjct: 2   TGDNVPTIVIDNGSGTTKAGFAGNDTPTTVFPSIVGRRRDEDSVMEDTEEKDTYVGNEAQ 61

Query: 62  SKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNE--LRVAPEEHPILLTEAPLNPKAN 117
           + R    L L+YPIE+GI+ NWD ME+IW +TF+N+  L  +PEEHP+LLTE PLNP +N
Sbjct: 62  NDRDNSLLELRYPIENGIILNWDAMEQIWDYTFFNKGDLLPSPEEHPLLLTEPPLNPPSN 121

Query: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--TGIVLDSGDGVSHTVPIYEGYALPH 175
           REK+T+++FET N PA+Y+AIQAVLSLYASG +  TG+V+DSGD V+H +P+ +G  LP 
Sbjct: 122 REKITELLFETLNVPALYLAIQAVLSLYASGSSDETGLVIDSGDSVTHVIPVVDGIVLPK 181

Query: 176 AILRLDLAGRDLTDALMKILTE-----RGYSFTTT---AEREIVRDMKEKL-------AY 220
           A+ R+D+ GRD+TD L K+L E     RGY+  +       EIV ++KE++       AY
Sbjct: 182 AVKRIDIGGRDITDYLKKLLREKYPPSRGYNLKSELVEYSSEIVNEIKEEVCETDDESAY 241

Query: 221 IALDYEQELETAK----------------TSSAVEKSYELPDGQVITIGAE-RFRCPEVL 263
           ++LD E+E E  +                 +S  ++S ELPDG+ I  G E RF+ PE+L
Sbjct: 242 VSLDAEEEFEEEEEKPAEKSTESTFQLSKETSIAKESKELPDGEEIEFGNEERFKAPEIL 301

Query: 264 FQP-----------------------------SMIGMESAGIHETTYNSIMKCDVDIRKD 294
           F+P                             + +G + AG+ E  Y SI  CD D+RK 
Sbjct: 302 FKPELPISGLEEAGKIDESKQELVAENYEISPTNLGNDIAGLPELVYQSIQICDEDVRKS 361

Query: 295 LYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF 354
           LY NIVL+GG++  PG A+R+ KE+++LAPS  K+ V+ PP+     W+G SILASL TF
Sbjct: 362 LYSNIVLTGGTSKIPGFAERLQKELTSLAPSIWKVSVIPPPDPSLDAWLGASILASLETF 421

Query: 355 QQMWIAKSEYDESGPSIVHRKCF 377
           QQ+WI K EY+E GP I+  K F
Sbjct: 422 QQLWITKEEYEEHGPDILQEKRF 444

Length = 444

>gnl|CDD|240343 PTZ00280, PTZ00280, Actin-related protein 3; Provisional

 Score =  339 bits (870), Expect = e-114
 Identities = 153/407 (37%), Positives = 218/407 (53%), Gaps = 48/407 (11%)

Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMV---GMGQKDAYVGDEAQSKRGI 66
           +V DNGTG  K G+AG+  P  + P+++             G    D Y+GDEA +    
Sbjct: 7   VVIDNGTGYTKMGYAGNTEPTYIIPTLIADNSKQSRRRSKKGFEDLDFYIGDEALAASKS 66

Query: 67  LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
            TL YP++HGIV +WD MEK W    +  LR  PEEH  +LTE P+NP  NRE   +IMF
Sbjct: 67  YTLTYPMKHGIVEDWDLMEKFWEQCIFKYLRCEPEEHYFILTEPPMNPPENREYTAEIMF 126

Query: 127 ETFNAPAMYVAIQAVLSLYAS----------GRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
           ETFN   +Y+A+QAVL+L AS          G  TG V+DSGDGV+H +P+ +GY +  +
Sbjct: 127 ETFNVKGLYIAVQAVLALRASWTSKKAKELGGTLTGTVIDSGDGVTHVIPVVDGYVIGSS 186

Query: 177 ILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET----- 231
           I  + LAGRD+T+ + ++L ERG          + + +KEK  Y+A D  +E E      
Sbjct: 187 IKHIPLAGRDITNFIQQMLRERGEPIPAEDILLLAQRIKEKYCYVAPDIAKEFEKYDSDP 246

Query: 232 -------AKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNS 283
                     +S  +K Y       + +G ERF  PE+ F P +   E +  + E   ++
Sbjct: 247 KNHFKKYTAVNSVTKKPYT------VDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDA 300

Query: 284 IMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI----------------SALAPSSM 327
           I  C +D R+ LY NIVLSGGSTMF G   R+ +++                  L P  +
Sbjct: 301 IQSCPIDCRRPLYKNIVLSGGSTMFKGFDKRLQRDVRKRVDRRLKKAEELSGGKLKPIPI 360

Query: 328 KIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHR 374
            + VV+ P ++Y+VW GGS+LAS   F+++   K+EYDE GPSI   
Sbjct: 361 DVNVVSHPRQRYAVWYGGSMLASSPEFEKVCHTKAEYDEYGPSICRY 407

Length = 414

>gnl|CDD|212657 cd00012, NBD_sugar-kinase_HSP70_actin, Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily

 Score = 78.8 bits (194), Expect = 3e-17
 Identities = 43/192 (22%), Positives = 62/192 (32%), Gaps = 53/192 (27%)

Query: 10  LVCDNGTGMVKAGFAGDDA---PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI 66
           L  D G+   KAG A  D    P  + P+ VGRP                          
Sbjct: 1   LGIDIGSTSTKAGVADLDGEILPEEIVPTPVGRP-------------------------- 34

Query: 67  LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-HPILLTEAPLNPKANREKMTQI- 124
                    G V++ D++E+         LR    E   + +TE    PK NRE +    
Sbjct: 35  ---------GAVTDLDELEEALRELLKEALRQLKSEIDAVGITEPGGVPKENREVIILPN 85

Query: 125 --------MFETFNAPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGY 171
                     E      + V   AV +  A G       T +V+D G G +    + +G 
Sbjct: 86  LLLIPLALALEDLGGVPVAVVNDAVAAALAEGLFGKEEDTVLVVDLGTGTTGIAIVEDGK 145

Query: 172 ALPHAILRLDLA 183
               A   L +A
Sbjct: 146 GGVGAAGELGIA 157

This superfamily includes the actin family, the HSP70 family of molecular chaperones and nucleotide exchange factors, the ROK (repressor, ORF, kinase) family, the hexokinase family, the FGGY family (which includes glycerol kinase and similar carbohydrate kinases such as rhamnulokinase and xylulokinase), the exopolyphosphatase/guanosine pentaphosphate phosphohydrolase/nucleoside triphosphate diphosphohydrolase family, propionate kinase/acetate kinase family, glycerol dehydratase reactivase, 2-hydroxyglutaryl-CoA dehydratase component A, N-acetylglucosamine kinase, butyrate kinase 2, Escherichia coli YeaZ and similar glycoproteases, the cell shape-determining protein MreB, the plasmid DNA segregation factor ParM, cell cycle proteins FtsA, Pili assembly protein PilM, ethanolamine utilization protein EutJ, and similar proteins. The nucleotide-binding site residues are conserved; the nucleotide sits in a deep cleft formed between the two lobes of the nucleotide-binding domain (NBD). Substrate binding to superfamily members is associated with closure of this catalytic site cleft. The functional activities of several members of the superfamily, including hexokinases, actin, and HSP70s, are modulated by allosteric effectors, which may act on the cleft closure. Length = 185

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	377
PTZ00452	375	actin; Provisional	100.0
PTZ00281	376	actin; Provisional	100.0
PTZ00466	380	actin-like protein; Provisional	100.0
KOG0676	372	consensus Actin and related proteins [Cytoskeleton	100.0
PTZ00004	378	actin-2; Provisional	100.0
PTZ00280	414	Actin-related protein 3; Provisional	100.0
PF00022	393	Actin: Actin; InterPro: IPR004000 Actin [, ] is a	100.0
smart00268	373	ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarki	100.0
KOG0679	426	consensus Actin-related protein - Arp4p/Act3p [Cyt	100.0
cd00012	371	ACTIN Actin; An ubiquitous protein involved in the	100.0
KOG0677	389	consensus Actin-related protein Arp2/3 complex, su	100.0
COG5277	444	Actin and related proteins [Cytoskeleton]	100.0
KOG0680	400	consensus Actin-related protein - Arp6p [Cytoskele	100.0
KOG0681	645	consensus Actin-related protein - Arp5p [Cytoskele	100.0
KOG0678	415	consensus Actin-related protein Arp2/3 complex, su	100.0
KOG0797	618	consensus Actin-related protein [Cytoskeleton]	100.0
PRK13930	335	rod shape-determining protein MreB; Provisional	100.0
PRK13927	334	rod shape-determining protein MreB; Provisional	100.0
TIGR00904	333	mreB cell shape determining protein, MreB/Mrl fami	100.0
PRK13929	335	rod-share determining protein MreBH; Provisional	100.0
PF06723	326	MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Ba	100.0
PRK13928	336	rod shape-determining protein Mbl; Provisional	99.98
COG1077	342	MreB Actin-like ATPase involved in cell morphogene	99.95
TIGR02529	239	EutJ ethanolamine utilization protein EutJ family	99.88
PRK15080	267	ethanolamine utilization protein EutJ; Provisional	99.83
TIGR01991	599	HscA Fe-S protein assembly chaperone HscA. The Hea	99.82
CHL00094	621	dnaK heat shock protein 70	99.82
PTZ00400	663	DnaK-type molecular chaperone; Provisional	99.81
PRK01433	595	hscA chaperone protein HscA; Provisional	99.81
PLN03184	673	chloroplast Hsp70; Provisional	99.81
PRK00290	627	dnaK molecular chaperone DnaK; Provisional	99.81
TIGR02350	595	prok_dnaK chaperone protein DnaK. Members of this	99.8
PTZ00186	657	heat shock 70 kDa precursor protein; Provisional	99.8
PRK05183	616	hscA chaperone protein HscA; Provisional	99.79
PRK13410	668	molecular chaperone DnaK; Provisional	99.79
PRK13411	653	molecular chaperone DnaK; Provisional	99.79
PTZ00009	653	heat shock 70 kDa protein; Provisional	99.78
PRK11678	450	putative chaperone; Provisional	99.69
PF00012	602	HSP70: Hsp70 protein; InterPro: IPR013126 Heat sho	99.67
COG0443	579	DnaK Molecular chaperone [Posttranslational modifi	99.67
KOG0100	663	consensus Molecular chaperones GRP78/BiP/KAR2, HSP	99.51
PRK09472	420	ftsA cell division protein FtsA; Reviewed	99.48
TIGR01174	371	ftsA cell division protein FtsA. This bacterial ce	99.45
KOG0101	620	consensus Molecular chaperones HSP70/HSC70, HSP70	99.44
COG0849	418	ftsA Cell division ATPase FtsA [Cell division and	99.34
TIGR01175	348	pilM type IV pilus assembly protein PilM. This pro	99.3
PRK13917	344	plasmid segregation protein ParM; Provisional	99.25
KOG0104	902	consensus Molecular chaperones GRP170/SIL1, HSP70	99.19
PF11104	340	PilM_2: Type IV pilus assembly protein PilM;; PDB:	99.17
TIGR03739	320	PRTRC_D PRTRC system protein D. A novel genetic sy	99.17
COG4820	277	EutJ Ethanolamine utilization protein, possible ch	99.17
KOG0103	727	consensus Molecular chaperones HSP105/HSP110/SSE1,	98.98
COG4972	354	PilM Tfp pilus assembly protein, ATPase PilM [Cell	98.88
KOG0102	640	consensus Molecular chaperones mortalin/PBP74/GRP7	98.84
PF06406	318	StbA: StbA protein; InterPro: IPR009440 This entry	98.42
TIGR00241	248	CoA_E_activ CoA-substrate-specific enzyme activase	98.36
TIGR03286	404	methan_mark_15 putative methanogenesis marker prot	98.14
PRK10719	475	eutA reactivating factor for ethanolamine ammonia	98.1
TIGR02261	262	benz_CoA_red_D benzoyl-CoA reductase, bcr type, su	98.08
TIGR03192	293	benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q s	98.06
COG1924	396	Activator of 2-hydroxyglutaryl-CoA dehydratase (HS	97.97
PF06277	473	EutA: Ethanolamine utilisation protein EutA; Inter	97.25
PRK13317	277	pantothenate kinase; Provisional	96.09
TIGR02259	432	benz_CoA_red_A benzoyl-CoA reductase, bcr type, su	95.97
PF01869	271	BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; In	95.96
PF08841	332	DDR: Diol dehydratase reactivase ATPase-like domai	95.78
PRK11031	496	guanosine pentaphosphate phosphohydrolase; Provisi	95.59
TIGR03706	300	exo_poly_only exopolyphosphatase. It appears that	95.19
TIGR00555	279	panK_eukar pantothenate kinase, eukaryotic/staphyl	94.97
COG0248	492	GppA Exopolyphosphatase [Nucleotide transport and	94.08
TIGR00744	318	ROK_glcA_fam ROK family protein (putative glucokin	94.07
PRK10854	513	exopolyphosphatase; Provisional	94.0
PRK03011	358	butyrate kinase; Provisional	93.76
PF14450	120	FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B	93.66
PRK09557	301	fructokinase; Reviewed	92.86
PF01968	290	Hydantoinase_A: Hydantoinase/oxoprolinase; InterPr	91.95
PF02541	285	Ppx-GppA: Ppx/GppA phosphatase family; InterPro: I	91.53
COG2441	374	Predicted butyrate kinase [Energy production and c	91.14
PF07318	343	DUF1464: Protein of unknown function (DUF1464); In	91.08
COG4819	473	EutA Ethanolamine utilization protein, possible ch	90.46
PRK13321	256	pantothenate kinase; Reviewed	88.64
PRK13324	258	pantothenate kinase; Reviewed	88.38
TIGR03123	318	one_C_unchar_1 probable H4MPT-linked C1 transfer p	88.38
TIGR02707	351	butyr_kinase butyrate kinase. This model represent	88.0
PF03309	206	Pan_kinase: Type III pantothenate kinase; InterPro	87.95
COG1521	251	Pantothenate kinase type III (Bvg accessory factor	87.71
COG1548	330	Predicted transcriptional regulator/sugar kinase [	84.66
TIGR00671	243	baf pantothenate kinase, type III. This model desc	83.34
PRK13318	258	pantothenate kinase; Reviewed	81.75
KOG2708	336	consensus Predicted metalloprotease with chaperone	80.45

>PTZ00452 actin; Provisional

Probab=100.00  E-value=1.1e-84  Score=616.23  Aligned_cols=371  Identities=56%  Similarity=1.022  Sum_probs=347.5

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHHHHH
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK   86 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~~~~   86 (377)
                      .++||||+||+++|+||+|++.|++++||++++++......+....+.++|+++...++...+++|+++|.+.|||.++.
T Consensus         5 ~~~vViD~Gs~~~k~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~iG~~~~~~~~~~~l~~Pi~~G~I~dwd~~e~   84 (375)
T PTZ00452          5 YPAVVIDNGSGYCKIGIAGDDAPTSCFPAIVGRSKQNDGIFSTFNKEYYVGEEAQAKRGVLAIKEPIQNGIINSWDDIEI   84 (375)
T ss_pred             CCEEEEECCCCeEEEeeCCCCCcCEEecceeEEECCccccccccccceEEChhhhccccCcEEcccCcCCEEcCHHHHHH
Confidence            45899999999999999999999999999999987653222223557789999988878889999999999999999999


Q ss_pred             HHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceEEEE
Q 017102           87 IWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP  166 (377)
Q Consensus        87 ~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~p  166 (377)
                      +|+|+|.+.|+++++++|+++++|+++++..|+++++++||.|++|++++.+++++++|++|++||+|||+|++.|+|+|
T Consensus        85 iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~~~~~~lslya~g~~tglVVDiG~~~t~v~P  164 (375)
T PTZ00452         85 IWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYISNEAVLSLYTSGKTIGLVVDSGEGVTHCVP  164 (375)
T ss_pred             HHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCCceEEEechHHHHHHHCCCceeeeecCCCCcceEEE
Confidence            99999988999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC
Q 017102          167 IYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD  246 (377)
Q Consensus       167 v~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd  246 (377)
                      |+||+++.++..++++||++++++|.++|.++++++....+.+.++++|+++||++.|+++++............|.+||
T Consensus       165 V~dG~~l~~~~~r~~~gG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~y~LPD  244 (375)
T PTZ00452        165 VFEGHQIPQAITKINLAGRLCTDYLTQILQELGYSLTEPHQRIIVKNIKERLCYTALDPQDEKRIYKESNSQDSPYKLPD  244 (375)
T ss_pred             EECCEEeccceEEeeccchHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCcHHHHHHHhhccCCcCceEECCC
Confidence            99999999999999999999999999999988888877777889999999999999999887765544444567899999


Q ss_pred             CceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCC
Q 017102          247 GQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSS  326 (377)
Q Consensus       247 ~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~  326 (377)
                      |+.+.++.+|+.++|+||+|++++.+..||+++|.++|.+||.|.|+.|++||||+||+|++|||.+||++||+.++|..
T Consensus       245 g~~i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~  324 (375)
T PTZ00452        245 GNILTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELCRNIVLSGGTTLFPGIANRLSNELTNLVPSQ  324 (375)
T ss_pred             CCEEEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHhHHHHhhccEEEecccccccCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             ceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          327 MKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       327 ~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      .++++..+++|.+++|+||||+|++++|+++||||+||+|+|+++++||||
T Consensus       325 ~~v~v~~~~~r~~~aW~GgSilasl~~f~~~~vtk~eYeE~G~~i~~~k~~  375 (375)
T PTZ00452        325 LKIQVAAPPDRRFSAWIGGSIQCTLSTQQPQWIKRQEYDEQGPSIVHRKCF  375 (375)
T ss_pred             ceeEEecCCCcceeEEECchhhcCccchhhhEeEHHHHhccCcceeeeecC
Confidence            899999999999999999999999999999999999999999999999997

>PTZ00281 actin; Provisional

Probab=100.00  E-value=3.5e-84  Score=614.59  Aligned_cols=376  Identities=90%  Similarity=1.409  Sum_probs=352.7

Q ss_pred             CCCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCH
Q 017102            2 ADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNW   81 (377)
Q Consensus         2 ~~~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~   81 (377)
                      |..|+.++||||+||+++|+||+|++.|++++||.++++++...+.+.++.+.++|+++...+....+++|+++|.+.||
T Consensus         1 ~~~~~~~~vViD~Gs~~~k~G~age~~P~~i~ps~vg~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~Pi~~G~i~dw   80 (376)
T PTZ00281          1 MDGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW   80 (376)
T ss_pred             CCCCcCCeEEEECCCCeEEEeeCCCCCCCeeccccceeecCcccccCcccCCeEECchhhccccCcEEeccCcCCEEcCH
Confidence            56778899999999999999999999999999999999877654444445678899998877777889999999999999


Q ss_pred             HHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCc
Q 017102           82 DDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  161 (377)
Q Consensus        82 ~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~  161 (377)
                      +.++.+|+++|.+.|.++++++||++++|+++++..|+++++++||.|++|++++.+++++++|++|++||+|||+|++.
T Consensus        81 d~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp~~~~~~~~~ls~ya~g~~tglVVDiG~~~  160 (376)
T PTZ00281         81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGV  160 (376)
T ss_pred             HHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCceeEeeccHHHHHHhcCCceEEEEECCCce
Confidence            99999999999889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccce
Q 017102          162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS  241 (377)
Q Consensus       162 t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~  241 (377)
                      |+|+||+||+++.++..++++||++++++|+++|.++++++....+.+.++++|+++|||+.+++.+++...........
T Consensus       161 t~v~PV~dG~~~~~~~~~~~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~  240 (376)
T PTZ00281        161 SHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKS  240 (376)
T ss_pred             EEEEEEEecccchhheeeccCcHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhcEEecCCchHHHHhhhcCccccee
Confidence            99999999999999999999999999999999999888887777778899999999999999988777655444456678


Q ss_pred             EEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhh
Q 017102          242 YELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISA  321 (377)
Q Consensus       242 ~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~  321 (377)
                      |.+|||+.+.++.+|+.++|+||+|+..+.+..+|+++|.++|.+||.|.|+.|++||||+||+|++|||.+||++||+.
T Consensus       241 y~LPdg~~i~i~~er~~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~El~~  320 (376)
T PTZ00281        241 YELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELTA  320 (376)
T ss_pred             EECCCCCEEEeeHHHeeCcccccChhhcCCCCCCHHHHHHHHHHhCChhHHHHHHhhccccCccccCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999899999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       322 ~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ++|...++++..+++|.+++|+|||++|++++|++.||||+||+|+|+++++||||
T Consensus       321 ~~p~~~~v~v~~~~~r~~~aW~Ggsilasl~~f~~~~vtk~eY~E~G~~~~~~k~~  376 (376)
T PTZ00281        321 LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF  376 (376)
T ss_pred             hCCCCcceEEecCCCCceeEEECcccccCcccHhhceeeHHHHhhhCchheeeecC
Confidence            99988899999999999999999999999999999999999999999999999997

>PTZ00466 actin-like protein; Provisional

Probab=100.00  E-value=1.5e-83  Score=609.02  Aligned_cols=370  Identities=52%  Similarity=0.970  Sum_probs=345.9

Q ss_pred             CCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHHHH
Q 017102            6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDME   85 (377)
Q Consensus         6 ~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~~~   85 (377)
                      +.++||||+||+++|+||+|++.|++++||++++++....+.+....+.++|+++...++...+++|+++|.+.|||.++
T Consensus        11 ~~~~iViD~GS~~~K~G~ag~~~P~~~~ps~vg~~k~~~~~~~~~~~~~~vG~~~~~~~~~~~l~~Pi~~G~v~dwd~~e   90 (380)
T PTZ00466         11 SNQPIIIDNGTGYIKAGFAGEDVPNLVFPSYVGRPKYKRVMAGAVEGNIFVGNKAEEYRGLLKVTYPINHGIIENWNDME   90 (380)
T ss_pred             cCCeEEEECCCCcEEEeeCCCCCCCEeccceeeeecCccccccCCCCCeEECchhhhhCcCceeCccccCCeECCHHHHH
Confidence            45689999999999999999999999999999998876544444456789999988777777899999999999999999


Q ss_pred             HHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceEEE
Q 017102           86 KIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV  165 (377)
Q Consensus        86 ~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~  165 (377)
                      .+|+|+| +.|++.++++|+++++++++++..|+++++++||.|++|++++.++++||+|++|++||+|||+|++.|+|+
T Consensus        91 ~iw~~~f-~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p~~~~~~~~~lsl~a~g~~tglVVD~G~~~t~v~  169 (380)
T PTZ00466         91 NIWIHVY-NSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVPALFISIQAILSLYSCGKTNGTVLDCGDGVCHCV  169 (380)
T ss_pred             HHHHHHH-hhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCCCeEEEecchHHHHHhcCCceEEEEeCCCCceEEE
Confidence            9999998 889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC
Q 017102          166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP  245 (377)
Q Consensus       166 pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p  245 (377)
                      ||+||+++.++..++++||++++++|+++|.+++..+....+.+.++++|+++|||+.|+.++.+... .......|.+|
T Consensus       170 PV~~G~~~~~~~~~~~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~v~~iKe~~c~v~~d~~~e~~~~~-~~~~~~~y~LP  248 (380)
T PTZ00466        170 SIYEGYSITNTITRTDVAGRDITTYLGYLLRKNGHLFNTSAEMEVVKNMKENCCYVSFNMNKEKNSSE-KALTTLPYILP  248 (380)
T ss_pred             EEECCEEeecceeEecCchhHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhCeEecCChHHHHhhcc-ccccceeEECC
Confidence            99999999999999999999999999999998888777777888999999999999999877665432 22345789999


Q ss_pred             CCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCC
Q 017102          246 DGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS  325 (377)
Q Consensus       246 d~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~  325 (377)
                      ||..+.++.+|++++|+||+|+.++.+..+|+++|.++|.+||.|.|+.|++||||+||+|++|||.+||++||+.+.|.
T Consensus       249 dg~~i~l~~er~~~~E~LF~P~~~g~~~~gl~~~i~~sI~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~EL~~l~p~  328 (380)
T PTZ00466        249 DGSQILIGSERYRAPEVLFNPSILGLEYLGLSELIVTSITRADMDLRRTLYSHIVLSGGTTMFHGFGDRLLNEIRKFAPK  328 (380)
T ss_pred             CCcEEEEchHHhcCcccccCccccCCCCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCccccCCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          326 SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       326 ~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ..++++..+++|++++|+|||++|++++|++.||||+||+|+|+++++||||
T Consensus       329 ~~~v~v~~~~~r~~~aW~GgSilasl~~f~~~~itk~eYeE~G~~iv~rk~~  380 (380)
T PTZ00466        329 DITIRISAPPERKFSTFIGGSILASLATFKKIWISKQEFDEYGSVILHRKTF  380 (380)
T ss_pred             CceEEEecCCCCceeEEECchhhcCccchhhhEeEHHHHhhhCcHhheeecC
Confidence            8899999999999999999999999999999999999999999999999997

>KOG0676 consensus Actin and related proteins [Cytoskeleton]

Probab=100.00  E-value=8e-84  Score=590.16  Aligned_cols=369  Identities=81%  Similarity=1.313  Sum_probs=351.3

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHH
Q 017102            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         4 ~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~   83 (377)
                      ..+.++||||+||..+|+||+|++.|+.++||.++++++...+.++.+.+.++|+++...+   .+++|+++|.+.||++
T Consensus         4 ~~~~~~vViDnGsg~~KaGfag~~~P~~v~ps~vg~~~~~~~~~~~~~~~~~vg~~a~~~~---~l~~Pie~Giv~~wd~   80 (372)
T KOG0676|consen    4 ADDIQAVVIDNGSGFVKAGFAGDDAPRAVFPSIVGRPRHQGVMAGMTQKDTYVGDEAESKR---TLKYPIERGIVTDWDD   80 (372)
T ss_pred             cCCcceEEEECCCceeecccCCCCCCceecceeccccccccccccccccccccchhhhccc---cccCccccccccchHH
Confidence            4567999999999999999999999999999999999998888888899999999998877   6799999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceE
Q 017102           84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH  163 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~  163 (377)
                      ++.||.|+|+..|.++|+++||++++|+++|+..||++++++||.|++|++++..++++  |++|++||+|||+|++.|.
T Consensus        81 me~iw~~if~~~L~~~Pee~pvllte~pl~p~~nREk~tqi~FE~fnvpa~yva~qavl--ya~g~ttG~VvD~G~gvt~  158 (372)
T KOG0676|consen   81 MEKIWHHLFYSELLVAPEEHPVLLTEPPLNPKANREKLTQIMFETFNVPALYVAIQAVL--YASGRTTGLVVDSGDGVTH  158 (372)
T ss_pred             HHHHHHHHHHHhhccCcccCceEeecCCCCchHhHHHHHHHhhhhcCccHhHHHHHHHH--HHcCCeeEEEEEcCCCcee
Confidence            99999999999999999999999999999999999999999999999999999554444  9999999999999999999


Q ss_pred             EEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEE
Q 017102          164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE  243 (377)
Q Consensus       164 v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~  243 (377)
                      ++||++|+++++++..+++||++++++++..|.++++.+....+.++++++|+++||++.|+++++............|.
T Consensus       159 ~vPI~eG~~lp~ai~~ldl~G~dlt~~l~~~L~~~g~s~~~~~~~eIv~diKeklCyvald~~~e~~~~~~~~~l~~~y~  238 (372)
T KOG0676|consen  159 VVPIYEGYALPHAILRLDLAGRDLTDYLLKQLRKRGYSFTTSAEFEIVRDIKEKLCYVALDFEEEEETANTSSSLESSYE  238 (372)
T ss_pred             eeecccccccchhhheecccchhhHHHHHHHHHhcccccccccHHHHHHHhHhhhcccccccchhhhccccccccccccc
Confidence            99999999999999999999999999999999999999988889999999999999999999998887444555667799


Q ss_pred             cCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhC
Q 017102          244 LPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA  323 (377)
Q Consensus       244 ~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~  323 (377)
                      +|||+.+.++.+|+.++|+||+|+.++.+..+|++++.++|.+|++|.|+.|+.||+|+||++.+|||.+||++|++.+.
T Consensus       239 lPDg~~i~i~~erf~~pE~lFqP~~~g~e~~gi~~~~~~sI~kcd~dlrk~L~~nivLsGGtT~~pGl~~Rl~kEl~~l~  318 (372)
T KOG0676|consen  239 LPDGQKITIGNERFRCPEVLFQPSLLGMESPGIHELTVNSIMKCDIDLRKDLYENIVLSGGTTMFPGLADRLQKELQALA  318 (372)
T ss_pred             CCCCCEEecCCcccccchhcCChhhcCCCCCchhHHHHHHHHhCChhHhHHHHhheEEeCCcccchhHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      |...+++++.+|++.+++|+||||+|++.+|+.+||||+||+|+|+.+++||||
T Consensus       319 P~~~~ikv~~pp~r~~s~WlGgSIlaslstfq~~witk~eY~e~g~~~~~rk~f  372 (372)
T KOG0676|consen  319 PSTIKIKVIAPPERKYSAWLGGSILASLSTFQQMWITKEEYEEHGPSIIHRKCF  372 (372)
T ss_pred             CCCcceEEecCcccccceecCceeEeecchHhhccccHHHHhhhCCceeeeccC
Confidence            998999999999999999999999999999999999999999999999999998

>PTZ00004 actin-2; Provisional

Probab=100.00  E-value=5.2e-82  Score=600.57  Aligned_cols=376  Identities=79%  Similarity=1.294  Sum_probs=350.3

Q ss_pred             CCCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCH
Q 017102            2 ADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNW   81 (377)
Q Consensus         2 ~~~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~   81 (377)
                      |+-++.++||||+||+++|+||+|++.|++++||+++++++...+.+...+..++|+++....+...+++|+++|.+.||
T Consensus         1 ~~~~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~Pi~~G~i~d~   80 (378)
T PTZ00004          1 MSVEETNAAVVDNGSGMVKAGFAGDDAPRCVFPSIVGRPKNPGIMVGMEEKDCYVGDEAQDKRGILTLKYPIEHGIVTNW   80 (378)
T ss_pred             CCCCCCCeEEEECCCCeEEEeeCCCCCCCEEccceeEEecccccccCcCCCceEECchhhcccccceEcccCcCCEEcCH
Confidence            46688889999999999999999999999999999999887654444445678899998877677789999999999999


Q ss_pred             HHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCc
Q 017102           82 DDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  161 (377)
Q Consensus        82 ~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~  161 (377)
                      +.++.+|+|+|.+.|++.+.++||++++|+++++..|+.+++++||.++++++++.+++++|+|++|.+||+|||+|++.
T Consensus        81 d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g~~tglVVDiG~~~  160 (378)
T PTZ00004         81 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  160 (378)
T ss_pred             HHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCceEEeeccHHHHHHhcCCceEEEEECCCCc
Confidence            99999999999888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCC-ccc
Q 017102          162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSA-VEK  240 (377)
Q Consensus       162 t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~-~~~  240 (377)
                      |+|+||+||+++.++..++++||++++++|+++|.+++..+....+.+.++++|+++|||+.|+++++........ ...
T Consensus       161 t~v~pV~dG~~l~~~~~~~~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~  240 (378)
T PTZ00004        161 SHTVPIYEGYSLPHAIHRLDVAGRDLTEYMMKILHERGTTFTTTAEKEIVRDIKEKLCYIALDFDEEMGNSAGSSDKYEE  240 (378)
T ss_pred             EEEEEEECCEEeecceeeecccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHhhcceeecCCHHHHHhhhhcCccccce
Confidence            9999999999999999999999999999999999998887777677889999999999999999887764432222 367


Q ss_pred             eEEcCCCceEeeCCccccccccCCCCCCCCCC-CCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHH
Q 017102          241 SYELPDGQVITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI  319 (377)
Q Consensus       241 ~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~-~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el  319 (377)
                      .|.+|||+.+.++.+|++++|+||+|+.++.+ ..+|+++|.++|.+||+|.|+.|++||+|+||+|++|||.+||++||
T Consensus       241 ~y~lPdg~~i~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~EL  320 (378)
T PTZ00004        241 SYELPDGTIITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDIDIRKDLYGNIVLSGGTTMYRGLPERLTKEL  320 (378)
T ss_pred             EEECCCCCEEEEcHHHeeCcccccChhhcCccccCChHHHHHHHHHhCChhHHHHHHhhEEeccchhcCcCHHHHHHHHH
Confidence            89999999999999999999999999998887 89999999999999999999999999999999999999999999999


Q ss_pred             hhhCCCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          320 SALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       320 ~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ++++|...++++..+++|.+++|+|||++|++++|++.||||+||+|+|++++.||||
T Consensus       321 ~~~~p~~~~~~v~~~~~~~~~aW~Ggsilas~~~f~~~~vtk~eYeE~G~~~~~rk~~  378 (378)
T PTZ00004        321 TTLAPSTMKIKVVAPPERKYSVWIGGSILSSLPTFQQMWVTKEEYDESGPSIVHRKCF  378 (378)
T ss_pred             HHhCCCCccEEEecCCCCceeEEECcccccCccchhhhEeEHHHHhhhCcceEEeecC
Confidence            9999988889999999999999999999999999999999999999999999999997

>PTZ00280 Actin-related protein 3; Provisional

Probab=100.00  E-value=1.2e-75  Score=563.88  Aligned_cols=370  Identities=41%  Similarity=0.749  Sum_probs=332.5

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCcc---ccCCCccceeccchhcccCcceeeccccCCccCCHHH
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM---VGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~---~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~   83 (377)
                      .++||||+||+++|+||+|++.|++++||++++++.....   .+....+.++|+++........+++|+++|.+.|||.
T Consensus         4 ~~~iViD~GS~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~l~~Pi~~G~I~dwd~   83 (414)
T PTZ00280          4 LPVVVIDNGTGYTKMGYAGNTEPTYIIPTLIADNSKQSRRRSKKGFEDLDFYIGDEALAASKSYTLTYPMKHGIVEDWDL   83 (414)
T ss_pred             CCeEEEECCCCceEeeeCCCCCCCEEecceeEEeccccccccccccccCCEEEcchhhhCcCCcEEecCccCCEeCCHHH
Confidence            5689999999999999999999999999999987653211   1112336789999988877789999999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhc----------CCceEE
Q 017102           84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS----------GRTTGI  153 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~----------g~~~~l  153 (377)
                      ++.+|+|+|.+.|++++.++++++++|++++...|+.+++++||.+++|++++.+++++|+|++          |.++|+
T Consensus        84 ~e~l~~~~~~~~L~~~p~~~~vllte~~~~~~~~Re~l~e~lFE~~~~p~i~~~~~~~lslya~~~~~~~~~~~g~~tgl  163 (414)
T PTZ00280         84 MEKFWEQCIFKYLRCEPEEHYFILTEPPMNPPENREYTAEIMFETFNVKGLYIAVQAVLALRASWTSKKAKELGGTLTGT  163 (414)
T ss_pred             HHHHHHHHHHHhhccCCCCCceEEeeCCCCcHHHHHHHHHHHhhccCCCeEEEecCHHHhHhhhcccccccccCCceeEE
Confidence            9999999988899999999999999999999999999999999999999999999999999999          999999


Q ss_pred             EEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhc
Q 017102          154 VLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAK  233 (377)
Q Consensus       154 VVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~  233 (377)
                      |||+|++.|+|+||++|+++.++..++++||++++++|.++|.+++..+....+.+.++++|+++||++.|+.++++...
T Consensus       164 VVDiG~~~T~i~PV~~G~~l~~~~~~~~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~e~~~~~  243 (414)
T PTZ00280        164 VIDSGDGVTHVIPVVDGYVIGSSIKHIPLAGRDITNFIQQMLRERGEPIPAEDILLLAQRIKEKYCYVAPDIAKEFEKYD  243 (414)
T ss_pred             EEECCCCceEEEEEECCEEcccceEEecCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHhcCcccCcHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998888777666678899999999999999888776543


Q ss_pred             cC-CCccceEEcCC---Cc--eEeeCCccccccccCCCCCCCCCC-CCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCC
Q 017102          234 TS-SAVEKSYELPD---GQ--VITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGST  306 (377)
Q Consensus       234 ~~-~~~~~~~~~pd---~~--~i~i~~~~~~~~e~lf~p~~~~~~-~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s  306 (377)
                      .. ......|.+||   |.  .+.++.+|++++|+||+|+.++.+ ..+|+++|.++|.+||+|.|+.|++||+|+||+|
T Consensus       244 ~~~~~~~~~~~~~d~~~g~~~~i~l~~erf~~~E~LF~P~~~~~~~~~gl~e~i~~sI~~~~~d~r~~L~~nIvL~GG~s  323 (414)
T PTZ00280        244 SDPKNHFKKYTAVNSVTKKPYTVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAIQSCPIDCRRPLYKNIVLSGGST  323 (414)
T ss_pred             cCcccccceEECCCCCCCCccEEEechHHhcCcccccChhhcCCccCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCcc
Confidence            22 22345688887   33  789999999999999999887544 4599999999999999999999999999999999


Q ss_pred             CCCChHHHHHHHHhhhC----------------CCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCc
Q 017102          307 MFPGIADRMSKEISALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPS  370 (377)
Q Consensus       307 ~i~g~~~rl~~el~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~  370 (377)
                      ++|||.+||++||+.++                |...++++..++++.+++|+||||+|++++|+++||||+||+|+|++
T Consensus       324 ~~~Gf~eRL~~El~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~GgSilas~~~f~~~~itk~eY~E~G~~  403 (414)
T PTZ00280        324 MFKGFDKRLQRDVRKRVDRRLKKAEELSGGKLKPIPIDVNVVSHPRQRYAVWYGGSMLASSPEFEKVCHTKAEYDEYGPS  403 (414)
T ss_pred             cCcCHHHHHHHHHHHhccccccccccccccccCCCCceEEEecCCccceeEEEChhhcccCcchhhheEEHHHHhccChH
Confidence            99999999999999986                34567889988899999999999999999999999999999999999


Q ss_pred             cccccc
Q 017102          371 IVHRKC  376 (377)
Q Consensus       371 ~~~~k~  376 (377)
                      +++|+.
T Consensus       404 i~~~~~  409 (414)
T PTZ00280        404 ICRYNN  409 (414)
T ss_pred             heeecc
Confidence            998873

>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton

Probab=100.00  E-value=2.5e-76  Score=567.87  Aligned_cols=368  Identities=51%  Similarity=0.970  Sum_probs=323.8

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHH
Q 017102            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         4 ~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~   83 (377)
                      .|+.++||||+||.+||+||+|++.|+.++|++++++.....     ..+.++|+++........+++|+++|.+.||+.
T Consensus         1 ~d~~~~vViD~Gs~~~k~G~age~~P~~v~ps~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~~~   75 (393)
T PF00022_consen    1 GDENKPVVIDNGSSTIKAGFAGEDLPRVVIPSVVGRPRDKNS-----SNDYYVGDEALSPRSNLELRSPIENGVIVDWDA   75 (393)
T ss_dssp             -TSSSEEEEEECSSEEEEEETTSSS-SEEEESEEEEESSSSS-----SSSCEETHHHHHTGTGEEEEESEETTEESSHHH
T ss_pred             CCCCCEEEEECCCceEEEEECCCCCCCCcCCCcccccccccc-----ceeEEeecccccchhheeeeeeccccccccccc
Confidence            478999999999999999999999999999999998876532     226789988666666678999999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceE
Q 017102           84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH  163 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~  163 (377)
                      ++.+|+++|.+.|.+++++++|++++|+++++..|+.+++++||++++++|+++++++||+|++|.+||||||+|++.|+
T Consensus        76 ~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~~~v~~~~~~~~a~~~~g~~tglVVD~G~~~t~  155 (393)
T PF00022_consen   76 LEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGVPSVYFIPSPLLALYASGRTTGLVVDIGYSSTS  155 (393)
T ss_dssp             HHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--SEEEEEEHHHHHHHHTTBSSEEEEEESSS-EE
T ss_pred             cccccccccccccccccccceeeeeccccCCchhhhhhhhhhhcccccceeeeeecccccccccccccccccccceeeee
Confidence            99999999988899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCC-----------------ccChhHHHHHHHHhHhcceeecCHH
Q 017102          164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYS-----------------FTTTAEREIVRDMKEKLAYIALDYE  226 (377)
Q Consensus       164 v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~-----------------~~~~~~~~~~~~ik~~~~~v~~~~~  226 (377)
                      |+||+||+++.++.+++++||++++++|+++|.+++..                 +....+...++++|+++|+++.+..
T Consensus       156 v~pV~dG~~~~~~~~~~~~GG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~  235 (393)
T PF00022_consen  156 VVPVVDGYVLPHSIKRSPIGGDDLTEYLKELLKERNIQINPSYLIKSKSPVEGESYNNSDDEEIVEEIKEECCYVSEDPD  235 (393)
T ss_dssp             EEEEETTEE-GGGBEEES-SHHHHHHHHHHHHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHHHHHHHHHHHSGGSSHH
T ss_pred             eeeeeeccccccccccccccHHHHHHHHHHHHHhhccccccccccccccccccccccchhhhccchhccchhhhcccccc
Confidence            99999999999999999999999999999999986432                 2334567889999999999999887


Q ss_pred             HHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCCCCCCC-------ChhHHHHHHHhcCCHHHHHhhhcCe
Q 017102          227 QELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESA-------GIHETTYNSIMKCDVDIRKDLYGNI  299 (377)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~-------~l~~~I~~~i~~~~~~~r~~l~~nI  299 (377)
                      . .+...........|.+|||+.+.++.+|+.++|+||+|+..+.+..       +|+++|.++|.+||.|.|+.|++||
T Consensus       236 ~-~~~~~~~~~~~~~~~lPdg~~i~~~~er~~~~E~LF~p~~~~~~~~~~~~~~~gL~~~I~~si~~~~~d~r~~l~~nI  314 (393)
T PF00022_consen  236 E-EQEEQASENPEKSYELPDGQTIILGKERFRIPEILFNPSLIGIDSASEPSEFMGLPELILDSISKCPIDLRKELLSNI  314 (393)
T ss_dssp             H-HHHHHHCSTTTEEEE-TTSSEEEESTHHHHHHHTTTSGGGGTSSSTS---SSSCHHHHHHHHHHTSTTTTHHHHHTTE
T ss_pred             c-ccccccccccceecccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhccccccccccccce
Confidence            5 1111222456778999999999999999999999999998887766       9999999999999999999999999


Q ss_pred             EEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCC-CCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          300 VLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP-ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       300 vl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~-~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      +||||+|++|||.+||++||..+.|...++++..++ +|.+++|.|||++|++++|+++||||+||+|+|+++++||||
T Consensus       315 vl~GG~S~i~G~~eRL~~eL~~~~~~~~~~~v~~~~~~~~~~aW~Ggsilasl~~f~~~~itr~eYeE~G~~~i~rkc~  393 (393)
T PF00022_consen  315 VLTGGSSLIPGFKERLQQELRSLLPSSTKVKVIAPPSDRQFAAWIGGSILASLSSFQSFWITREEYEEYGPSIIHRKCF  393 (393)
T ss_dssp             EEESGGGGSTTHHHHHHHHHHHHSGTTSTEEEE--T-TTTSHHHHHHHHHHTSGGGGGTSEEHHHHHHHGGGGHHHHT-
T ss_pred             EEecccccccchHHHHHHHhhhhhhccccceeccCchhhhhcccccceeeeccccccceeeeHHHHhCcCcceeeecCC
Confidence            999999999999999999999999888899999998 999999999999999999999999999999999999999997

These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....

>smart00268 ACTIN Actin

Probab=100.00  E-value=5.9e-75  Score=554.09  Aligned_cols=369  Identities=68%  Similarity=1.183  Sum_probs=339.9

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHHHHHH
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKI   87 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~~~~~   87 (377)
                      ++||||+||++||+||++++.|++++||+++++++.....+ ....+++|+++....+...+++|+++|.+.||+.++.+
T Consensus         2 ~~iviD~Gs~~~k~G~~~~~~P~~~~ps~v~~~~~~~~~~~-~~~~~~~G~~a~~~~~~~~~~~P~~~G~i~d~~~~e~i   80 (373)
T smart00268        2 PAIVIDNGSGTIKAGFAGEDEPQVVFPSIVGRPKDGKGMVG-DAKDTFVGDEAQEKRGGLELKYPIEHGIVENWDDMEKI   80 (373)
T ss_pred             CeEEEECCCCcEEEeeCCCCCCcEEccceeeEecccccccC-CCcceEecchhhhcCCCceecCCCcCCEEeCHHHHHHH
Confidence            58999999999999999999999999999998865432111 23467899998776666689999999999999999999


Q ss_pred             HHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceEEEEe
Q 017102           88 WHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI  167 (377)
Q Consensus        88 ~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~pv  167 (377)
                      |+++|.+.|++.++++++++++|.+++...|+.+++++||.++++++++++++++|+|++|.++|+|||+|++.|+|+||
T Consensus        81 ~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~pv  160 (373)
T smart00268       81 WDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNFPALYIAIQAVLSLYASGRTTGLVIDSGDGVTHVVPV  160 (373)
T ss_pred             HHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCCCeEEEeccHHHHHHhCCCCEEEEEecCCCcceEEEE
Confidence            99999778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhcc---CCCccceEEc
Q 017102          168 YEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKT---SSAVEKSYEL  244 (377)
Q Consensus       168 ~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~  244 (377)
                      +||.++.++.+++++||++++++|.++|++++..+....+.+.++++|+++|+++.+++++++....   .......|.+
T Consensus       161 ~~G~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l  240 (373)
T smart00268      161 VDGYVLPHAIKRIDIAGRDLTDYLKELLSERGYQFNSSAEFEIVREIKEKLCYVAEDFEKEMKKARESSESSKLEKTYEL  240 (373)
T ss_pred             ECCEEchhhheeccCcHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHhhhheeeecCChHHHHHHhhhcccccccceeEEC
Confidence            9999999999999999999999999999886666655667789999999999999998877765432   2445678999


Q ss_pred             CCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCC
Q 017102          245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAP  324 (377)
Q Consensus       245 pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~  324 (377)
                      |||..+.++.+|+.++|+||+|+..+.+..+|+++|.++|.+||.+.|+.+++||+||||+|++|||.+||++||+.+.|
T Consensus       241 pdg~~~~~~~er~~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p  320 (373)
T smart00268      241 PDGNTIKVGNERFRIPEILFKPELIGLEQKGIHELVYESIQKCDIDVRKDLYENIVLSGGSTLIPGFGERLEKELKQLAP  320 (373)
T ss_pred             CCCCEEEEChHHeeCchhcCCchhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCeEeecccccCcCHHHHHHHHHHHhCC
Confidence            99999999999999999999999999889999999999999999999999999999999999999999999999999999


Q ss_pred             CCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          325 SSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       325 ~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      ...++++..+++|.+++|.|||++|++++|++.||||+||+|+|+++++||||
T Consensus       321 ~~~~v~v~~~~~~~~~~W~G~silas~~~f~~~~vtk~eY~E~G~~i~~~k~~  373 (373)
T smart00268      321 KKLKVKVIAPPERKYSVWLGGSILASLSTFEDMWITKKEYEEHGSQIVERKCF  373 (373)
T ss_pred             CCceeEEecCCCCccceEeCcccccCccchhhhEEEHHHHhhhCcceEEeecC
Confidence            88889999889999999999999999999999999999999999999999997

ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily

>KOG0679 consensus Actin-related protein - Arp4p/Act3p [Cytoskeleton]

Probab=100.00  E-value=8.7e-75  Score=515.32  Aligned_cols=368  Identities=40%  Similarity=0.754  Sum_probs=318.7

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcc-cCcceeeccccCCccCCHH
Q 017102            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK-RGILTLKYPIEHGIVSNWD   82 (377)
Q Consensus         4 ~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~-~~~~~~~~p~~~g~i~~~~   82 (377)
                      .++..+||||+||++||+||+|++.|++++||.++.....+.- ..+...++++.++... +....++.|+++|.+.|||
T Consensus         8 gdEv~alViDpGS~~traGyaged~Pk~ilPS~~G~~tk~~~d-~~~~~~~y~~~~ai~~pr~gmEv~~~i~nGlv~dWD   86 (426)
T KOG0679|consen    8 GDEVSALVIDPGSHTTRAGYAGEDSPKAILPSVYGKVTKTDGD-AEDKKGYYVDENAIHVPRPGMEVKTPIKNGLVEDWD   86 (426)
T ss_pred             ccccceEEEeCCCceEeccccCCCCccccccceeeeeecccCc-cccccceEeechhccCCCCCCeeccchhcCCcccHH
Confidence            6889999999999999999999999999999999853222110 0123346888877654 5556789999999999999


Q ss_pred             HHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCce
Q 017102           83 DMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS  162 (377)
Q Consensus        83 ~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t  162 (377)
                      .++.+|+|.|..+|+++|.++|+++++|+.+++..|++++|++||++++|+++++.+++|++|++|+.||||||||+++|
T Consensus        87 ~~~~~w~~~~~~~Lk~~p~ehP~litEp~wN~~~~Rek~~ElmFE~~nvPAf~L~k~~v~~AFA~GrstalVvDiGa~~~  166 (426)
T KOG0679|consen   87 LFEMQWRYAYKNQLKVNPEEHPVLITEPPWNTRANREKLTELMFEKLNVPAFYLAKTAVCTAFANGRSTALVVDIGATHT  166 (426)
T ss_pred             HHHHHHHHHHhhhhhcCccccceeeecCCCCcHHHHHHHHHHHHhhcCCceEEEechHHHHHHhcCCCceEEEEecCCCc
Confidence            99999999998899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChh---------------------------------HHH
Q 017102          163 HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTA---------------------------------ERE  209 (377)
Q Consensus       163 ~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~---------------------------------~~~  209 (377)
                      +|+||+||+++.+++++.++||++|+..++++|..+++++.+..                                 ...
T Consensus       167 svsPV~DG~Vlqk~vvks~laGdFl~~~~~q~l~~~~iei~P~y~ia~k~~v~~g~~an~~~~~~~~d~tes~~~y~~~~  246 (426)
T KOG0679|consen  167 SVSPVHDGYVLQKGVVKSPLAGDFLNDQCRQLLEPKNIEIIPMYNIASKEPVREGYPANAVLRVSIPDLTESYHNYMEQR  246 (426)
T ss_pred             eeeeeecceEeeeeeEecccchHHHHHHHHHHHhhcCcccCcHHHhhhcccccccCcchhhhcCChhHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999998876543210                                 012


Q ss_pred             HHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCCC------------CCCCChh
Q 017102          210 IVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIG------------MESAGIH  277 (377)
Q Consensus       210 ~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~------------~~~~~l~  277 (377)
                      .++++|++++.++..+.++..   ..+-.++.|++|||....++.+||+++|.||.|+...            ....|++
T Consensus       247 v~~e~ke~v~qv~dtp~de~~---~~~i~~~~~efP~g~~~~~G~er~ripe~lF~Ps~v~~~s~~~~~~~~~n~~lG~~  323 (426)
T KOG0679|consen  247 VYQEFKESVLQVSDTPFDEEV---AAQIPTKHFEFPDGYTLDFGAERFRIPEYLFKPSLVKSSSKEAGATSHINTMLGLP  323 (426)
T ss_pred             HHHHHHHHHHhccCCCCcccc---cccCCCccccCCCCcccccCcceeecchhhcCcchhccccccccCCCCCccccCch
Confidence            355566666655432222111   1124578899999999999999999999999998642            2356999


Q ss_pred             HHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCC---CCccccchhhHHhhccccc
Q 017102          278 ETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTF  354 (377)
Q Consensus       278 ~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~---~~~~~~w~Gasi~a~l~~~  354 (377)
                      +++..+|..||+|+|..|+.|||+|||+|.|+||.+||++||+.++|.+ ++++++..   +|.+++|+||||+|+|++|
T Consensus       324 ~lv~sSi~~cDvdiR~~L~~nVivtGGtSliqG~s~RL~~ELs~~~P~s-rlki~as~~t~eR~~~~WlGGSILASLgtF  402 (426)
T KOG0679|consen  324 HLVYSSINMCDVDIRSSLLGNVIVTGGTSLIQGFSERLNKELSKRAPSS-RLKIIASGHTVERRFQSWLGGSILASLGTF  402 (426)
T ss_pred             HHHHhhhccChHHHHHHhhccEEEecCcchhhhHHHHHHHHHHHhCCcc-eEEEEecCceeeehhhhhhhhHHHhccccH
Confidence            9999999999999999999999999999999999999999999999987 99998763   7999999999999999999


Q ss_pred             ccccccHHHHhhcCC-ccccccc
Q 017102          355 QQMWIAKSEYDESGP-SIVHRKC  376 (377)
Q Consensus       355 ~~~~itr~~y~e~G~-~~~~~k~  376 (377)
                      +.+||||+||+|.|. +-+.|||
T Consensus       403 qq~WiSKqEYEE~G~d~~ve~rc  425 (426)
T KOG0679|consen  403 QQLWISKQEYEEVGKDQLVERRC  425 (426)
T ss_pred             HHHhhhHHHHHHhhhHHHHhhcC
Confidence            999999999999999 8899998

>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton

Probab=100.00  E-value=3e-72  Score=534.83  Aligned_cols=367  Identities=70%  Similarity=1.202  Sum_probs=335.4

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCc-ceeeccccCCccCCHHHHHHH
Q 017102            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKI   87 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~-~~~~~p~~~g~i~~~~~~~~~   87 (377)
                      +||||+||+++|+||++++.|++++||++++++......+.+....++|+++...... ..+++|+++|.+.||+.++.+
T Consensus         1 ~iViD~Gs~~~r~G~a~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~~G~~a~~~~~~~~~~~~P~~~G~i~d~~~~e~~   80 (371)
T cd00012           1 AVVIDNGSGTIKAGFAGEDAPRVVFPSCVGRPKHQSVMVGAGDKDYFVGEEALEKRGLGLELIYPIEHGIVVDWDDMEKI   80 (371)
T ss_pred             CEEEECCCCeEEEEeCCCCCCceEeeccceeecCcccccccCCCceEEchhhhhCCCCceEEcccccCCEEeCHHHHHHH
Confidence            6899999999999999999999999999998876543333345678899998876554 788999999999999999999


Q ss_pred             HHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceEEEEe
Q 017102           88 WHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI  167 (377)
Q Consensus        88 ~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~pv  167 (377)
                      |+++|.+.|..+++++++++++|+++++..|+.+++++||.+++++|++++++++|+|++|.++|+|||+|++.|+|+||
T Consensus        81 ~~~~~~~~l~~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~i~pv  160 (371)
T cd00012          81 WDHLFFNELKVNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNVPALYVAIQAVLSLYASGRTTGLVVDSGDGVTHVVPV  160 (371)
T ss_pred             HHHHHHHhcCCCCCCCceEEecCCCCCHHHHHHHHHHhhccCCCCEEEEechHHHHHHhcCCCeEEEEECCCCeeEEEEE
Confidence            99999888888888999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHH-hccCCCccceEEcCC
Q 017102          168 YEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET-AKTSSAVEKSYELPD  246 (377)
Q Consensus       168 ~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~pd  246 (377)
                      +||+++.++..++++||+++++++.++|++++..+....+...++++|+++|+++.++.++... ..........|.+||
T Consensus       161 ~~G~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~lpd  240 (371)
T cd00012         161 YDGYVLPHAIKRLDLAGRDLTRYLKELLRERGYELNSSDEREIVRDIKEKLCYVALDIEEEQDKSAKETSLLEKTYELPD  240 (371)
T ss_pred             ECCEEchhhheeccccHHHHHHHHHHHHHhcCCCccchhHHHHHHHHHHhheeecCCHHHHHHhhhccCCccceeEECCC
Confidence            9999999999999999999999999999988876666667889999999999999988766532 223344567899999


Q ss_pred             CceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCC-
Q 017102          247 GQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS-  325 (377)
Q Consensus       247 ~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~-  325 (377)
                      ++.+.++.+|+.++|+||+|+..+....+|+++|.++|..||.+.|+.+++||+||||+|++|||.+||++||..+.|. 
T Consensus       241 ~~~i~~~~er~~~~E~lF~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~Ivl~GG~s~~~gl~~rl~~el~~~~~~~  320 (371)
T cd00012         241 GRTIKVGNERFRAPEILFNPSLIGSEQVGISEAIYSSINKCDIDLRKDLYSNIVLSGGSTLFPGFGERLQKELLKLAPPS  320 (371)
T ss_pred             CeEEEEChHHhhChHhcCChhhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCEEEeCCccCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999998888889999999999999999999999999999999999999999999999999987 


Q ss_pred             -CceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccc
Q 017102          326 -SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRK  375 (377)
Q Consensus       326 -~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k  375 (377)
                       ...+++..+++|.+++|.|||++|++.+|++.||||+||+|+|+++++||
T Consensus       321 ~~~~~~~~~~~~~~~~aw~G~si~as~~~~~~~~itk~eY~E~G~~~~~~k  371 (371)
T cd00012         321 KDTKVKVIAPPERKYSVWLGGSILASLSTFQQLWITKEEYEEHGPSIVHRK  371 (371)
T ss_pred             cceEEEEccCCCccccEEeCchhhcCchhhhheEeeHHHHhhhCchhEecC
Confidence             55677878889999999999999999999999999999999999999987

Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.

>KOG0677 consensus Actin-related protein Arp2/3 complex, subunit Arp2 [Cytoskeleton]

Probab=100.00  E-value=8e-73  Score=478.31  Aligned_cols=371  Identities=50%  Similarity=0.911  Sum_probs=346.0

Q ss_pred             CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc--cccCCCccceeccchhcccCcceeeccccCCccCCHH
Q 017102            5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD   82 (377)
Q Consensus         5 ~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~--~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~   82 (377)
                      ++.++||.|.||.+.|+||+|++.|.+++|+.+++|--...  .....-++..||+++...+...++.||+.+|.+.||+
T Consensus         2 d~~~viV~DnGTGfVKcGyAg~NFP~~~FPs~VGRPilR~~e~~g~~~iKD~mvGdeaselRs~L~i~YPmeNGivrnwd   81 (389)
T KOG0677|consen    2 DSRNVIVCDNGTGFVKCGYAGENFPTHIFPSIVGRPILRAEEKVGNIEIKDLMVGDEASELRSLLDINYPMENGIVRNWD   81 (389)
T ss_pred             CCCCeEEEeCCCceEEeccccCCCcccccchhcCchhhhhhhhccCeehhhheccchHHHHHHHHhcCCccccccccChH
Confidence            45899999999999999999999999999999998753321  1122347888999999988889999999999999999


Q ss_pred             HHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCce
Q 017102           83 DMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS  162 (377)
Q Consensus        83 ~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t  162 (377)
                      +++++|+|.|.++|++++.+.++++++||++|...|+++++..||+++|.+|++.-++++++|+.|..+|+|||.|.+.|
T Consensus        82 dM~h~WDytF~ekl~idp~~~KiLLTePPmNP~kNREKm~evMFEkY~F~gvyvaiQAVLtLYAQGL~tGvVvDSGDGVT  161 (389)
T KOG0677|consen   82 DMEHVWDYTFGEKLKIDPTNCKILLTEPPMNPTKNREKMIEVMFEKYGFGGVYVAIQAVLTLYAQGLLTGVVVDSGDGVT  161 (389)
T ss_pred             HHHHHHHhhhhhhccCCCccCeEEeeCCCCCccccHHHHHHHHHHHcCCCeEEehHHHHHHHHHhcccceEEEecCCCee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceE
Q 017102          163 HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY  242 (377)
Q Consensus       163 ~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~  242 (377)
                      .|+||++|..+++-..+++++|++++++|.++|..+|+.++.+++++.++++|+++||++-|.+.+-+...++..+..+|
T Consensus       162 Hi~PVye~~~l~HLtrRldvAGRdiTryLi~LLl~rGYafN~tADFETVR~iKEKLCYisYd~e~e~kLalETTvLv~~Y  241 (389)
T KOG0677|consen  162 HIVPVYEGFVLPHLTRRLDVAGRDITRYLIKLLLRRGYAFNHTADFETVREIKEKLCYISYDLELEQKLALETTVLVESY  241 (389)
T ss_pred             EEeeeecceehhhhhhhccccchhHHHHHHHHHHhhccccccccchHHHHHHHhhheeEeechhhhhHhhhhheeeeeee
Confidence            99999999999999999999999999999999999999999999999999999999999999988888887878888999


Q ss_pred             EcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhh
Q 017102          243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISAL  322 (377)
Q Consensus       243 ~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~  322 (377)
                      .+|||..|.++.+||.+||.||+|.++..+.+++.+++.++|+..++|.|..+.++|+|+||++..||+..||++||+++
T Consensus       242 tLPDGRvIkvG~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R~~lYkhIVLSGGstMYPGLPSRLEkElkql  321 (389)
T KOG0677|consen  242 TLPDGRVIKVGGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIRSELYKHIVLSGGSTMYPGLPSRLEKELKQL  321 (389)
T ss_pred             ecCCCcEEEecceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchHHHHHhHeeecCCcccCCCCcHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999875


Q ss_pred             CC-----------CCceEEEECCCCCccccchhhHHhhcc-cccccccccHHHHhhcCCcccccc
Q 017102          323 AP-----------SSMKIKVVAPPERKYSVWIGGSILASL-STFQQMWIAKSEYDESGPSIVHRK  375 (377)
Q Consensus       323 ~~-----------~~~~v~v~~~~~~~~~~w~Gasi~a~l-~~~~~~~itr~~y~e~G~~~~~~k  375 (377)
                      .-           ...++++-.||.+...+|+||+++|.+ .+-+++|+||+||+|.|++.+.+.
T Consensus       322 yl~rVL~~d~~~l~KfkiRIEdPPrRKhMVflGGAVLA~imkD~d~fW~skqeyqE~G~~~l~k~  386 (389)
T KOG0677|consen  322 YLDRVLKGDTDKLKKFKIRIEDPPRRKHMVFLGGAVLAGIMKDKDEFWMSKQEYQEEGINVLNKL  386 (389)
T ss_pred             HHHHHHcCChhhhhheEEeccCCCccceeEEEchHHHHHHhcCCccceecHHHHHhhhHHHHHhh
Confidence            41           134688888999999999999999985 677899999999999999988764

>COG5277 Actin and related proteins [Cytoskeleton]

Probab=100.00  E-value=1.4e-68  Score=507.73  Aligned_cols=374  Identities=54%  Similarity=0.999  Sum_probs=339.5

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeC-CCCccccCCCccceeccchhcccC--cceeeccccCCccCC
Q 017102            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQSKRG--ILTLKYPIEHGIVSN   80 (377)
Q Consensus         4 ~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~-~~~~~~~~~~~~~~vg~~~~~~~~--~~~~~~p~~~g~i~~   80 (377)
                      .++.++||||+||.++|+||+|++.|++++|+++++.+ +...+......+.++|+++.....  ...+++|+++|.+.|
T Consensus         3 ~~~~~~iVIDnGS~~~k~Gfag~~~P~~V~ps~~~~~~~~~~~~~~~~~~~~~v~ne~~~~~~~~~~~~~~p~~~g~i~~   82 (444)
T COG5277           3 GDNVPTIVIDNGSGTTKAGFAGNDTPTTVFPSIVGRRRDEDSVMEDTEEKDTYVGNEAQNDRDNSLLELRYPIENGIILN   82 (444)
T ss_pred             CCCCCeEEEeCCCceEEeeecCCCCceeecccccccccccccccccccccccccCchhhhccCCccceeecccccCccCC
Confidence            44555699999999999999999999999999999886 444444556778899999887765  578899999999999


Q ss_pred             HHHHHHHHHHhccc--ccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc--eEEEEe
Q 017102           81 WDDMEKIWHHTFYN--ELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--TGIVLD  156 (377)
Q Consensus        81 ~~~~~~~~~~~~~~--~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~--~~lVVD  156 (377)
                      |++++++|+|+|..  .+...+.++|+++++|++++...|+.+++++||.++++++++..+++|++|+.|..  +|||||
T Consensus        83 W~~~e~~w~~~~~~~~~~~~~~~~~pllltep~~n~~~~re~~~e~~fE~~~vp~~~~~~~~~l~~ya~g~~~~~g~ViD  162 (444)
T COG5277          83 WDAMEQIWDYTFFNKGDLLPSPEEHPLLLTEPPLNPPSNREKITELLFETLNVPALYLAIQAVLSLYASGSSDETGLVID  162 (444)
T ss_pred             cHHHHHHHHHhhcchhhccCCCcCCceEEeccCCCcHHHHHHHHHHHHHhcCCcceEeeHHHHHHHHhcCCCCCceEEEE
Confidence            99999999999988  68888999999999999999999999999999999999999999999999999999  999999


Q ss_pred             CCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHh-----cCCCccCh---hHHHHHHHHhHhcc-------ee
Q 017102          157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTT---AEREIVRDMKEKLA-------YI  221 (377)
Q Consensus       157 iG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~---~~~~~~~~ik~~~~-------~v  221 (377)
                      +|++.|+|+||+||.++.++.+++++||++++.+|.++|..     +++.+...   .+.+.++.+|.++|       |+
T Consensus       163 ~G~~~t~v~PV~DG~~l~~a~~ri~~gG~~it~~l~~lL~~~~~~~~~~~l~~e~~~~~~ei~~~ik~e~~~~~~~~~y~  242 (444)
T COG5277         163 SGDSVTHVIPVVDGIVLPKAVKRIDIGGRDITDYLKKLLREKYPPSRGYNLKSELVEYSSEIVNEIKEEVCETDDESAYV  242 (444)
T ss_pred             cCCCceeeEeeeccccccccceeeecCcHHHHHHHHHHHhhcccccCCcccccccccccHHHHHHHHHhhccccccccch
Confidence            99999999999999999999999999999999999999998     66666654   56889999999999       88


Q ss_pred             ecCHHHHHHHhcc----------------CCCccceEEcCCCceEeeCCc-cccccccCCCCC--CCCCCCCC-------
Q 017102          222 ALDYEQELETAKT----------------SSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPS--MIGMESAG-------  275 (377)
Q Consensus       222 ~~~~~~~~~~~~~----------------~~~~~~~~~~pd~~~i~i~~~-~~~~~e~lf~p~--~~~~~~~~-------  275 (377)
                      ..+..++.+....                .......+..|+++.+.++.+ ||++||.+|.|.  ..+.+..+       
T Consensus       243 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~e~rf~~pE~lF~pe~~~~~l~~~~~~~~~~~  322 (444)
T COG5277         243 SLDAEEEFEEEEEKPAEKSTESTFQLSKETSIAKESKELPDGEEIEFGNEERFKAPEILFKPELPISGLEEAGKIDESKQ  322 (444)
T ss_pred             hhcchHHHHHHhhhhhhhcccccccccchhccccccccCCCCceEeechhhhhhcchhhcCCccccccccccccchhhhh
Confidence            8776665554332                223456789999999999998 999999999999  65555555       


Q ss_pred             --------------------hhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCC
Q 017102          276 --------------------IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP  335 (377)
Q Consensus       276 --------------------l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~  335 (377)
                                          |++++.++|..+|.+.|+.|++|||||||+|++|||.+||++||+.+.|...++++..++
T Consensus       323 ~~~~~~~~~~~~~~~~~~~gl~e~v~~si~~~~~~~r~~l~~nivitGGts~~pg~~~Rl~~el~~~~p~~~~v~v~~~~  402 (444)
T COG5277         323 ELVAENYEISPTNLGNDIAGLPELVYQSIQICDEDVRKSLYSNIVLTGGTSKIPGFAERLQKELTSLAPSIWKVSVIPPP  402 (444)
T ss_pred             hhhhhccccccccccccccchHHHHHHHHHhccHHHHHHHhhCEEEecCccCCCCHHHHHHHHHHhhcCCCCceeeecCC
Confidence                                999999999999999999999999999999999999999999999999998899999999


Q ss_pred             CCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          336 ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       336 ~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      +|.+.+|+|||++|++..|..+||||+||+|+|+.++++|||
T Consensus       403 ~~~~~~W~GaSila~~~~~~~~~itk~eY~e~G~~~~~~~~~  444 (444)
T COG5277         403 DPSLDAWLGASILASLETFQQLWITKEEYEEHGPDILQEKRF  444 (444)
T ss_pred             chhhccccchhhhccccchhheEeeHHHhhhhhhHHHhhccC
Confidence            999999999999999999999999999999999999999986

>KOG0680 consensus Actin-related protein - Arp6p [Cytoskeleton]

Probab=100.00  E-value=1.4e-65  Score=445.99  Aligned_cols=362  Identities=30%  Similarity=0.580  Sum_probs=327.1

Q ss_pred             CCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCc--ceeeccccCCccCCHHH
Q 017102            6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         6 ~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~--~~~~~p~~~g~i~~~~~   83 (377)
                      +.+|||+|.|++++|+|+++.+.|. ++|||+.+.++.       .++.++|++..+..+.  ..+++|+++|.+.+|+.
T Consensus         2 ~~~tiVlDNGay~~KiG~s~~~~p~-~vpNcl~kaK~~-------~rr~f~~nei~ec~D~ssL~y~rp~erGyLvnW~t   73 (400)
T KOG0680|consen    2 ETTTIVLDNGAYNIKIGPSTNKKPF-VVPNCLAKAKFG-------RRRSFLANEIDECKDISSLFYRRPHERGYLVNWDT   73 (400)
T ss_pred             CCceEEEcCCceeEEeccCCCCCce-eccchhhhcccc-------cchhhhhhhhhhccCccceEEeehhhcceeEeehh
Confidence            4679999999999999999999998 679999877653       4567899988777543  56788999999999999


Q ss_pred             HHHHHHHhcccc-cccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhc---C--------Cce
Q 017102           84 MEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS---G--------RTT  151 (377)
Q Consensus        84 ~~~~~~~~~~~~-L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~---g--------~~~  151 (377)
                      ..++|+++|.+. ..++.+++.+++++|.++-+...+...+++||+++|.+|+=.+.+.++++-.   +        ...
T Consensus        74 q~~vWDy~f~~~~~~~~~~~~~ivlTep~~~~psi~~~t~eilFEey~fd~v~kttaa~lva~~~~~~~ne~~tt~~~~c  153 (400)
T KOG0680|consen   74 QSQVWDYCFGNPGFDVEGKDHNIVLTEPCMTFPSIQEHTDEILFEEYQFDAVLKTTAAVLVAFTKYVRNNEDSTTTSSEC  153 (400)
T ss_pred             HHHHHHHHhcCCCcCcccCcceEEEecccccccchhhhHHHHHHHHhccceEeecCHHHhcchhhhccCCccccccccce
Confidence            999999999654 4566789999999999999999999999999999999999988888887751   1        237


Q ss_pred             EEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHH
Q 017102          152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET  231 (377)
Q Consensus       152 ~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~  231 (377)
                      ++|||.|++.|.|+|+++|.+..++++++++||+.++..|++.+..+.+++..  +...++++|+..|||++|+.+.++.
T Consensus       154 ~lVIDsGysfThIip~v~g~~~~qaV~RiDvGGK~LTn~LKE~iSyR~lNvmd--ET~vVNeiKEdvcfVSqnF~~~m~~  231 (400)
T KOG0680|consen  154 CLVIDSGYSFTHIIPVVKGIPYYQAVKRIDVGGKALTNLLKETISYRHLNVMD--ETYVVNEIKEDVCFVSQNFKEDMDI  231 (400)
T ss_pred             EEEEeCCCceEEEehhhcCcchhhceEEeecchHHHHHHHHHHhhhhhhcccc--hhhhhhhhhhheEEechhhHHHHHH
Confidence            99999999999999999999999999999999999999999999988888754  7788999999999999999999987


Q ss_pred             hccC---CCccceEEcCC-------------------CceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCH
Q 017102          232 AKTS---SAVEKSYELPD-------------------GQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDV  289 (377)
Q Consensus       232 ~~~~---~~~~~~~~~pd-------------------~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~  289 (377)
                      ....   +.....|.+||                   .+.+.+..|||.+||+||+|++++.++.||+|+|.++|..||.
T Consensus       232 ~~~k~~~~~~~i~YvLPDF~T~k~Gyvr~~~vk~~~d~qii~L~nErF~IPEilF~Psdi~I~q~GIpEAV~esl~~~Pe  311 (400)
T KOG0680|consen  232 AKTKFQENKVMIDYVLPDFSTSKRGYVRNEDVKLPEDEQIITLTNERFTIPEILFSPSDIGIQQPGIPEAVLESLSMLPE  311 (400)
T ss_pred             HhhccccceeEEEEecCCcccccceeEecCCCCCCCCcceeeecccccccchhhcChhhcCcccCCchHHHHHHHHhCHH
Confidence            6554   23456677776                   3577889999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCC
Q 017102          290 DIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP  369 (377)
Q Consensus       290 ~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~  369 (377)
                      ++|+.|+.|||++||++++|||.+||..||++++|.++.+++..|.||..-+|.||+-++..++|...||||+||+|+|+
T Consensus       312 ~~~p~l~~NIv~iGGn~~fPgF~~RL~~Elr~l~P~d~~v~V~~p~dp~~~~W~~g~~~~~~~~~~~~~itR~dy~E~G~  391 (400)
T KOG0680|consen  312 EVRPLLLENIVCIGGNSNFPGFRQRLARELRSLLPADWEVSVSVPEDPITFAWEGGSEFAKTDSFEKAVITREDYEEHGP  391 (400)
T ss_pred             HHHHHHHhcEEEecCccCCcchHHHHHHHHHhhCCccceEEEecCCCcceeeehhccccccCcchhcceecHhhHhhcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccC
Q 017102          370 SIVHRKCF  377 (377)
Q Consensus       370 ~~~~~k~~  377 (377)
                      +.+.+|+|
T Consensus       392 ~~~~~~~~  399 (400)
T KOG0680|consen  392 SWCTKKRF  399 (400)
T ss_pred             hhhhhhcc
Confidence            99998876

>KOG0681 consensus Actin-related protein - Arp5p [Cytoskeleton]

Probab=100.00  E-value=1.4e-53  Score=393.72  Aligned_cols=363  Identities=29%  Similarity=0.581  Sum_probs=313.4

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCc-ceeeccccCCccCCHHHHH
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDME   85 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~-~~~~~p~~~g~i~~~~~~~   85 (377)
                      ..|||||+||+.+|+|++|+..|+++|++.+.++++...    +....+||++.....++ ...++|+...++++|+.+|
T Consensus        23 ~~piVIDNGS~~~RaGw~ge~eP~lvFrNvl~r~Rdrk~----~~s~t~vgnd~~~~~~~Rs~~rSPFd~nVvtNwel~E   98 (645)
T KOG0681|consen   23 TIPIVIDNGSYECRAGWAGEKEPRLVFRNVLTRPRDRKL----GASVTLVGNDILNFQGVRSSPRSPFDRNVVTNWELME   98 (645)
T ss_pred             CCcEEEeCCceeEeecccCCCCccchhhhhhcccccccc----ccccccccchhhhhhhhhccCCCCCcCCccccHHHHH
Confidence            678999999999999999999999999999999986543    22334688776554333 3568999999999999999


Q ss_pred             HHHHHhcccccccCC--CCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhh-hcCC---ceEEEEeCCC
Q 017102           86 KIWHHTFYNELRVAP--EEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLY-ASGR---TTGIVLDSGD  159 (377)
Q Consensus        86 ~~~~~~~~~~L~~~~--~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~-~~g~---~~~lVVDiG~  159 (377)
                      ++++|+| .+|+.+.  -+||+++|++..+|...|..+.++|||.+|+|+|.+--+++.|+| -++.   .+|+||++|+
T Consensus        99 ~ilDY~F-~~LG~~~~~idhPIilTE~laNP~~~R~~m~elLFE~YgvP~V~yGIDslfS~~hN~~~~~~~~~liis~g~  177 (645)
T KOG0681|consen   99 QILDYIF-GKLGVDGQGIDHPIILTEALANPVYSRSEMVELLFETYGVPKVAYGIDSLFSFYHNYGKSSNKSGLIISMGH  177 (645)
T ss_pred             HHHHHHH-HhcCCCccCCCCCeeeehhccChHHHHHHHHHHHHHHcCCcceeechhhHHHHhhccCcccCcceEEEecCC
Confidence            9999998 8899987  479999999999999999999999999999999999999999999 3343   3699999999


Q ss_pred             CceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCC---
Q 017102          160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS---  236 (377)
Q Consensus       160 ~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~---  236 (377)
                      +.|.|.||.||..+....+++++||.+...||.++|+.++.-+........++.++..+||++.||.+++.......   
T Consensus       178 ~~T~vipvldG~~il~~~kRiN~GG~qa~dYL~~Lmq~Kyp~~~~~~t~sk~E~l~~eHcyis~DY~eei~~~l~~d~~d  257 (645)
T KOG0681|consen  178 SATHVIPVLDGRLILKDVKRINWGGYQAGDYLSRLMQLKYPFHLNAFTGSKAERLLHEHCYISPDYREEIIKILEMDYYD  257 (645)
T ss_pred             CcceeEEEecCchhhhcceeeccCcchHHHHHHHHHhccCccchhhcCHHHHHHHhhhhceeCcchHHHHHHHhhhhhhh
Confidence            99999999999999999999999999999999999988777666666777899999999999988777543211000   


Q ss_pred             --------------------------------------------Cc--------------------------cceE---E
Q 017102          237 --------------------------------------------AV--------------------------EKSY---E  243 (377)
Q Consensus       237 --------------------------------------------~~--------------------------~~~~---~  243 (377)
                                                                  ..                          ...|   .
T Consensus       258 ~~~~~~qlP~~evl~~~e~~l~Ae~kqekRlq~~a~lkrv~k~~~re~~redeqql~~~~kaq~e~e~~~D~~q~~~ll~  337 (645)
T KOG0681|consen  258 ENRNYFQLPYTEVLAEVELALTAEKKQEKRLQEQAALKRVEKINARENRREDEQQLESYNKAQGEQESNLDLEQKFPLLN  337 (645)
T ss_pred             ccceEEecccccccchhhhhccHHHHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHHhhhchhcCccHhhhchhhc
Confidence                                                        00                          0000   0


Q ss_pred             cCC-----------------------------------------------------------------------------
Q 017102          244 LPD-----------------------------------------------------------------------------  246 (377)
Q Consensus       244 ~pd-----------------------------------------------------------------------------  246 (377)
                      +|+                                                                             
T Consensus       338 v~~eL~~d~lk~k~~qr~lkas~dar~rar~eke~Er~~k~~~~r~~~~~swl~e~r~k~~~ller~~~kk~lk~e~~~r  417 (645)
T KOG0681|consen  338 VPAELDEDQLKEKKKQRILKASTDARLRARVEKELERLNKLEEEREENLISWLEELREKLEKLLERISQKKRLKQELKDR  417 (645)
T ss_pred             chhhhCHHHHHHHHHHHHHHhhhhhhccccccchHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence            000                                                                             


Q ss_pred             --------------------------------------------------------------------------------
Q 017102          247 --------------------------------------------------------------------------------  246 (377)
Q Consensus       247 --------------------------------------------------------------------------------  246 (377)
                                                                                                      
T Consensus       418 ~s~~Sq~rmr~~~~La~~~~~rrk~~~~t~D~fg~~Dedw~vYe~lee~~~~~~~dl~~l~~~L~e~Dp~F~~~~~~~~d  497 (645)
T KOG0681|consen  418 KSHASQLRMRALARLAYEQVVRRKRKEATPDNFGARDEDWDVYEDLEEENKSILEDLKSLNHELLEFDPHFTQYVEGTTD  497 (645)
T ss_pred             hhhhhHhhhHHHHhhhHHHHHHHhcccCCccccccchhhHHHHHHhhhhhhhHHHHHHHHHHHHHhhCcccccccccccC
Confidence                                                                                            


Q ss_pred             ------------CceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHH
Q 017102          247 ------------GQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR  314 (377)
Q Consensus       247 ------------~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~r  314 (377)
                                  ...+.++.+|+++||++|+|+++|.++.||.+++..++++.|.+.+..+.+||+||||+|++||+++|
T Consensus       498 ~~~~~~p~~~~e~~qlh~nVEriRvPEIiFqPsiiG~dQaGl~Ei~~~il~r~p~~eq~~lV~nVllTGG~s~~pGmkeR  577 (645)
T KOG0681|consen  498 PRNGVLPGFTAEDYQLHLNVERIRVPEIIFQPSIIGIDQAGLAEIMDTILRRYPHDEQEKLVSNVLLTGGCSQLPGMKER  577 (645)
T ss_pred             cccCcchhHHHhhhhhhhcceeeccceeeeccccccchhhhHHHHHHHHHHhCchhhhHhhhhheEeecccccCcCHHHH
Confidence                        01455788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCccccc
Q 017102          315 MSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHR  374 (377)
Q Consensus       315 l~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~  374 (377)
                      |.+||..+.|...++.|+.+.||.++||+||+.+|.-.+|...|+||+||+|+|++.++.
T Consensus       578 i~kElt~mrP~gS~i~V~rasdP~LDAW~GA~~~a~n~~f~~~~~Tr~dy~E~G~e~~kE  637 (645)
T KOG0681|consen  578 IKKELTSMRPVGSSINVVRASDPVLDAWRGASAWAANPTFTLTQITRKDYEEKGEEYLKE  637 (645)
T ss_pred             HHHHhheecccCCceEEEecCCcchhhhhhhHHhhcCcccchhhhhHHhhhhhhHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999987654

>KOG0678 consensus Actin-related protein Arp2/3 complex, subunit Arp3 [Cytoskeleton]

Probab=100.00  E-value=1.2e-51  Score=359.65  Aligned_cols=367  Identities=40%  Similarity=0.688  Sum_probs=310.9

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc--------cccCCCccceeccchhcccCcceeeccccCCcc
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV   78 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i   78 (377)
                      +.++|+|+|+.++|.||+|...|++++|++++......+        .-+..+.++++|++++. .+.+.+.+|+++|.+
T Consensus         4 ~~p~V~d~Gtgytklg~agn~~p~~i~p~~ia~~~~~~~s~~~~~~~~~~~~dldf~ig~eal~-~~~ysl~ypiRhg~v   82 (415)
T KOG0678|consen    4 NLPCVIDNGTGYTKLGYAGNTEPQFIIPTAIAVKESAAVSSKATRRVKRGTEDLDFFIGDEALD-ATTYSLKYPIRHGQV   82 (415)
T ss_pred             CCceeeccCcceeeeeccccCCcccccceeEEeccccccccchhhhhhccccccceecccHHHh-hcccccccceecccc
Confidence            455999999999999999999999999999876432211        11234568899999988 557889999999999


Q ss_pred             CCHHHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcC--------Cc
Q 017102           79 SNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG--------RT  150 (377)
Q Consensus        79 ~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g--------~~  150 (377)
                      .||+.++++|...+.++|...|++|-.++++|++++.+.|+.+.++.||.++++.+++.-++++|+-+.-        .-
T Consensus        83 e~wd~mer~~~q~ifkylr~ePedh~fLlteppln~penreytaeImfEsfnvpglyiAVqavLALaaswts~~v~er~l  162 (415)
T KOG0678|consen   83 EDWDLMERFWEQCIFKYLRAEPEDHYFLLTEPPLNQPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERFL  162 (415)
T ss_pred             ccHHHHHHHHhhhhhhhhcCCcccceEEecCCCCCCchhhHHHHHhhhhhccCchHHHHHHHHHHHHHHHHHhhhhhhee
Confidence            9999999999999989999999999999999999999999999999999999999999999998876442        35


Q ss_pred             eEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHH
Q 017102          151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELE  230 (377)
Q Consensus       151 ~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~  230 (377)
                      +|+|||.|.+-|.|.||.+|+++-++++.+|+.|++++..+.++|++++...+.....+.++.+|+++||+.+|.-.+..
T Consensus       163 tG~VidsGdgvThvipvaEgyVigScik~iPiagrdiT~fiQ~llRer~~~iP~e~sl~tak~iKe~ycy~cPdivkef~  242 (415)
T KOG0678|consen  163 TGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYTCPDIVKEFA  242 (415)
T ss_pred             eeEEEecCCCeeEEEEeecceEEeeeeccccccCCchhHHHHHHhhCCCCCCChHHhhhhhHHHHhhhcccCcHHHHHHH
Confidence            89999999999999999999999999999999999999999999988888777777788999999999999998877766


Q ss_pred             HhccCCCcc-ceE---EcCCC--ceEeeCCccccccccCCCCCCCCCC-CCChhHHHHHHHhcCCHHHHHhhhcCeEEec
Q 017102          231 TAKTSSAVE-KSY---ELPDG--QVITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCDVDIRKDLYGNIVLSG  303 (377)
Q Consensus       231 ~~~~~~~~~-~~~---~~pd~--~~i~i~~~~~~~~e~lf~p~~~~~~-~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~G  303 (377)
                      ++...+... +.|   .+-.+  ..+.++.+||..+|++|.|.....+ ...|++.+...|++||+|+|+.|++||++.|
T Consensus       243 k~d~ep~K~ikq~~~~~~i~~~~~~vDvgyerFlgpEiff~Pe~a~~d~~~~~~~~vd~~Iq~~pIdvrr~ly~nivlsg  322 (415)
T KOG0678|consen  243 KYDREPAKWIKQYTGINVITGKKFVVDVGYERFLGPEIFFHPEFANPDFLTPLSEVVDWVIQHCPIDVRRPLYKNIVLSG  322 (415)
T ss_pred             HhccCHHHHHHHHhccchhcCCceeecccHHhhcChhhhcCccccCCccCcchHHHhhhhhhhCCcccchhhhhHHhhcc
Confidence            544322111 111   11122  2456788999999999999876544 5579999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHHhhhCC--------------CCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCC
Q 017102          304 GSTMFPGIADRMSKEISALAP--------------SSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP  369 (377)
Q Consensus       304 G~s~i~g~~~rl~~el~~~~~--------------~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~  369 (377)
                      |.+...+|..|++.++..+..              ....+.++...-..+++|-||+++++...|-..+=||++|+|+|+
T Consensus       323 gst~fk~fgr~lqrD~kr~vd~rl~~s~~lsg~k~~~vdvqvish~~qr~avwfggs~lastpef~~~~~tk~~yee~g~  402 (415)
T KOG0678|consen  323 GSTMFKDFGRRLQRDLKRLVDTRLAESEGLSGIKSKPVDVQVLSHLLQRTAVWFGGSKLASTPEFVPACHTKEDYEEYGP  402 (415)
T ss_pred             chHHHHHhhhhccHHHHHHHHHHHHHhcccccCCCCCceeehhhhhhhhcceeccCccccCCcccccccCcchhhhhhCh
Confidence            999999999999988865431              112355555556679999999999999999999999999999999


Q ss_pred             ccccc
Q 017102          370 SIVHR  374 (377)
Q Consensus       370 ~~~~~  374 (377)
                      +|++.
T Consensus       403 si~r~  407 (415)
T KOG0678|consen  403 SICRT  407 (415)
T ss_pred             hhhhc
Confidence            99864

>KOG0797 consensus Actin-related protein [Cytoskeleton]

Probab=100.00  E-value=2.9e-40  Score=303.46  Aligned_cols=312  Identities=20%  Similarity=0.393  Sum_probs=239.0

Q ss_pred             cceeeccccCCccCC----------HHHHHHHHHHhcccccccCC---CCCcEEEEeCCCCCHHHHHHHHhhhcccCCCC
Q 017102           66 ILTLKYPIEHGIVSN----------WDDMEKIWHHTFYNELRVAP---EEHPILLTEAPLNPKANREKMTQIMFETFNAP  132 (377)
Q Consensus        66 ~~~~~~p~~~g~i~~----------~~~~~~~~~~~~~~~L~~~~---~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~  132 (377)
                      .+.+++|+++|.+.-          .+++.++|+|++.+.|++.+   .++.+|+++|..+.+.+.+.++.++|-+++|.
T Consensus       178 ~y~l~~Pir~G~fNv~~~y~Slq~l~~dlt~il~yaL~e~L~Ip~~kl~qy~aVlVVpD~f~r~hveefl~ilL~eL~F~  257 (618)
T KOG0797|consen  178 PYCLYHPIRRGHFNVSPPYYSLQRLCEDLTAILDYALLEKLHIPHKKLFQYHAVLVVPDTFDRRHVEEFLTILLGELGFN  257 (618)
T ss_pred             cceeecccccceeccCCcchhHHHHHHHHHHHHHHHHHHhcCCChhHhcceeEEEEecchhhHHHHHHHHHHHHHHhccc
Confidence            367899999998753          46789999999989999986   46899999999999999999999999999999


Q ss_pred             eEEeechhhhhhhhcCCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCc-----cChhH
Q 017102          133 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSF-----TTTAE  207 (377)
Q Consensus       133 ~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~-----~~~~~  207 (377)
                      ++.++.+++|++|++|.+++||||||+..|+|+||.||..+.++...+++||.+|++.|..+|++.+..+     ....+
T Consensus       258 ~~~v~QESlaatfGaGlss~CVVdiGAQkTsIaCVEdGvs~~ntri~L~YGGdDitr~f~~ll~rs~FPy~d~~v~~~~d  337 (618)
T KOG0797|consen  258 SAVVHQESLAATFGAGLSSACVVDIGAQKTSIACVEDGVSLPNTRIILPYGGDDITRCFLWLLRRSGFPYQDCDVLAPID  337 (618)
T ss_pred             eEEEEhhhhHHHhcCCccceeEEEccCcceeEEEeecCccccCceEEeccCCchHHHHHHHHHHhcCCCccccccccccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999877654     44567


Q ss_pred             HHHHHHHhHhcceeecCHHH-HHHHh--ccCCC--ccce--------------------------------EEcCCCc--
Q 017102          208 REIVRDMKEKLAYIALDYEQ-ELETA--KTSSA--VEKS--------------------------------YELPDGQ--  248 (377)
Q Consensus       208 ~~~~~~ik~~~~~v~~~~~~-~~~~~--~~~~~--~~~~--------------------------------~~~pd~~--  248 (377)
                      +.+++++|+++|........ .....  .+++.  ...+                                |..||.+  
T Consensus       338 ~lLl~~LKe~Fc~l~~a~~~vQ~~~F~~R~pn~~~~kytfk~~DE~mlAPlaLF~P~lf~~~~tk~~~~q~~~q~d~~d~  417 (618)
T KOG0797|consen  338 WLLLNQLKEKFCHLRAAELGVQLTVFSYREPNPPTLKYTFKLGDEVMLAPLALFYPNLFVIEGTKSHKNQSFPQPDREDL  417 (618)
T ss_pred             HHHHHHHHHHhccccHhhhhhhhhhhhccCCCCcceeeeeeccchhhccchhhhhhhhhhccccccccccccCCCCcccc
Confidence            89999999999987532111 00000  01000  0011                                1222200  


Q ss_pred             ---------------------------eEeeC-CccccccccCCCCCC-----------------------------CCC
Q 017102          249 ---------------------------VITIG-AERFRCPEVLFQPSM-----------------------------IGM  271 (377)
Q Consensus       249 ---------------------------~i~i~-~~~~~~~e~lf~p~~-----------------------------~~~  271 (377)
                                                 .+.+. ..|-..+|..-.+.+                             .-.
T Consensus       418 fd~e~~~~~~~~~~~~~~g~~~l~ls~~i~~~~~~~~~l~~~~d~~Elg~t~~d~f~p~~~s~~gslaa~~i~n~~~~~~  497 (618)
T KOG0797|consen  418 FDYEYLLEDTWKQDFGGGGNDGLQLSDSIGFSNRIRDQLPEKPDKEELGVTLKDNFAPLEKSIVGSLAAASIMNKKGLYE  497 (618)
T ss_pred             cchhhhhhhcccccccccccccccccccccccccccccccccccchhhccccccccCCchhhhhhhhhhhhhhcccceec
Confidence                                       00000 001111111111110                             000


Q ss_pred             C----CCChhHHHHHHHhcC-CHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCC----ceEEEECCC---CCcc
Q 017102          272 E----SAGIHETTYNSIMKC-DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSS----MKIKVVAPP---ERKY  339 (377)
Q Consensus       272 ~----~~~l~~~I~~~i~~~-~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~----~~v~v~~~~---~~~~  339 (377)
                      .    ...+.+.|..+|..+ ..+.+++|.+.|.++||+...||+.+.|++.+....|..    ..|.|+.+|   ||++
T Consensus       498 ~f~gl~l~ldqsii~sid~~~sdd~~rKl~sSil~Vgga~~~~g~~~~LEeRi~n~~pp~~~~I~~VsVip~prdMdp~~  577 (618)
T KOG0797|consen  498 SFYGLLLALDQSIISSIDSALSDDTKRKLFSSILLVGGAGLFPGLVAALEERILNAIPPGREAIDTVSVIPPPRDMDPQF  577 (618)
T ss_pred             cccchhhccchhHHHhhhhhccchhhHhhhhHHHhhcccccchhHHHHHHHHHhccCCccccccCceeecCCCcCCCchh
Confidence            0    124555677788776 678899999999999999999999999999988766652    146777665   7999


Q ss_pred             ccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          340 SVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       340 ~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      -+|+||+|+|.++.-.++||++.||+-+|.++++.||.
T Consensus       578 VaWKGaaIla~l~~~~ELwI~~~dW~~~G~RvL~~k~~  615 (618)
T KOG0797|consen  578 VAWKGAAILAILDFVRELWIENSDWQVHGVRVLQYKKY  615 (618)
T ss_pred             eEecchhhhhHHHHHHHHheechhHhhhhhhhhhhccc
Confidence            99999999999988899999999999999999999974

>PRK13930 rod shape-determining protein MreB; Provisional

Probab=100.00  E-value=6.1e-38  Score=295.09  Aligned_cols=308  Identities=19%  Similarity=0.242  Sum_probs=235.9

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhccc----CcceeeccccCCccCCHHHH
Q 017102            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDDM   84 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~~~~~~   84 (377)
                      .++||+||+++++|++++. +.+..||+++..+..       ++..++|++|.+..    ....+++|+++|.+.||+.+
T Consensus        10 ~vgiDlGt~~t~i~~~~~~-~~~~~ps~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~pi~~G~i~d~~~~   81 (335)
T PRK13930         10 DIGIDLGTANTLVYVKGKG-IVLNEPSVVAIDTKT-------GKVLAVGEEAKEMLGRTPGNIEAIRPLKDGVIADFEAT   81 (335)
T ss_pred             ceEEEcCCCcEEEEECCCC-EEEecCCEEEEECCC-------CeEEEEcHHHHHhhhcCCCCeEEeecCCCCeEcCHHHH
Confidence            3999999999999998775 456689999876431       23568999987652    34578999999999999999


Q ss_pred             HHHHHHhccccccc-CCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCC
Q 017102           85 EKIWHHTFYNELRV-APEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSG  158 (377)
Q Consensus        85 ~~~~~~~~~~~L~~-~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG  158 (377)
                      +.+|++++.+.+.. .....++++++|..++...|+.+.+ +||.+|++.++++++|+||++++|.     .+++|||+|
T Consensus        82 e~ll~~~~~~~~~~~~~~~~~vvit~P~~~~~~~r~~~~~-~~e~~g~~~~~lv~ep~AAa~a~g~~~~~~~~~lVvDiG  160 (335)
T PRK13930         82 EAMLRYFIKKARGRRFFRKPRIVICVPSGITEVERRAVRE-AAEHAGAREVYLIEEPMAAAIGAGLPVTEPVGNMVVDIG  160 (335)
T ss_pred             HHHHHHHHHHHhhcccCCCCcEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEecccHHHHHHhcCCCcCCCCceEEEEeC
Confidence            99999999444442 2336789999999999998888777 6799999999999999999999987     578999999


Q ss_pred             CCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCc
Q 017102          159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAV  238 (377)
Q Consensus       159 ~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~  238 (377)
                      +++|++++|.+|.++  .....++||+++++++.+++.++. .+..  ..+.++++|+++|++..+.+.+  .... ...
T Consensus       161 ~gttdvs~v~~g~~~--~~~~~~lGG~~id~~l~~~l~~~~-~~~~--~~~~ae~~K~~~~~~~~~~~~~--~~~~-~~~  232 (335)
T PRK13930        161 GGTTEVAVISLGGIV--YSESIRVAGDEMDEAIVQYVRRKY-NLLI--GERTAEEIKIEIGSAYPLDEEE--SMEV-RGR  232 (335)
T ss_pred             CCeEEEEEEEeCCEE--eecCcCchhHHHHHHHHHHHHHHh-CCCC--CHHHHHHHHHHhhcCcCCCCCc--eEEE-ECc
Confidence            999999999999887  456789999999999999987542 2211  2367999999999886553211  0000 000


Q ss_pred             cceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcC-eEEecCCCCCCChHHHHHH
Q 017102          239 EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGN-IVLSGGSTMFPGIADRMSK  317 (377)
Q Consensus       239 ~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~n-Ivl~GG~s~i~g~~~rl~~  317 (377)
                      ...+.+|+  .+.++.+++  .|++|.+      ..++.+.|.++|.+++.+.+..+++| |+||||+|++|||.+||++
T Consensus       233 ~~~~~~~~--~~~i~~~~~--~e~i~~~------~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipg~~~~l~~  302 (335)
T PRK13930        233 DLVTGLPK--TIEISSEEV--REALAEP------LQQIVEAVKSVLEKTPPELAADIIDRGIVLTGGGALLRGLDKLLSE  302 (335)
T ss_pred             cCCCCCCe--eEEECHHHH--HHHHHHH------HHHHHHHHHHHHHhCCHHHhhHHHhCCEEEECchhcchhHHHHHHH
Confidence            00111222  334444444  4777765      23588899999999999999899987 9999999999999999999


Q ss_pred             HHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          318 EISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       318 el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ++..      +++  ...+|..++-.||++++.-
T Consensus       303 ~~~~------~v~--~~~~p~~ava~Ga~~~~~~  328 (335)
T PRK13930        303 ETGL------PVH--IAEDPLTCVARGTGKALEN  328 (335)
T ss_pred             HHCC------Cce--ecCCHHHHHHHHHHHHHhC
Confidence            9842      233  3456788899999998753

>PRK13927 rod shape-determining protein MreB; Provisional

Probab=100.00  E-value=3.3e-36  Score=283.04  Aligned_cols=307  Identities=18%  Similarity=0.247  Sum_probs=228.7

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhccc----CcceeeccccCCccCCHHH
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~~~~~   83 (377)
                      +.|+||+||+++|+|+++++. .+.+||+++.++..       ...+++|++|....    ....+.+|+++|.+.||+.
T Consensus         6 ~~igIDlGt~~~~i~~~~~~~-~~~~ps~v~~~~~~-------~~~~~vG~~a~~~~~~~~~~~~~~~pi~~G~i~d~~~   77 (334)
T PRK13927          6 NDLGIDLGTANTLVYVKGKGI-VLNEPSVVAIRTDT-------KKVLAVGEEAKQMLGRTPGNIVAIRPMKDGVIADFDV   77 (334)
T ss_pred             ceeEEEcCcceEEEEECCCcE-EEecCCEEEEECCC-------CeEEEecHHHHHHhhcCCCCEEEEecCCCCeecCHHH
Confidence            359999999999999999876 56899999987542       23468999988762    4466889999999999999


Q ss_pred             HHHHHHHhcccccccCCCCC-cEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeC
Q 017102           84 MEKIWHHTFYNELRVAPEEH-PILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDS  157 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~-~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi  157 (377)
                      .+.+|++++.+.+.. ..++ .+++++|..++...| +.++.+|+.++++.+.++++|+||++++|.     .+++|||+
T Consensus        78 ~~~ll~~~~~~~~~~-~~~~~~~vi~vP~~~~~~~r-~~~~~a~~~ag~~~~~li~ep~aaa~~~g~~~~~~~~~lvvDi  155 (334)
T PRK13927         78 TEKMLKYFIKKVHKN-FRPSPRVVICVPSGITEVER-RAVRESALGAGAREVYLIEEPMAAAIGAGLPVTEPTGSMVVDI  155 (334)
T ss_pred             HHHHHHHHHHHHhhc-cCCCCcEEEEeCCCCCHHHH-HHHHHHHHHcCCCeeccCCChHHHHHHcCCcccCCCeEEEEEe
Confidence            999999999776666 5545 577777766555554 557777899999999999999999999987     46799999


Q ss_pred             CCCceEEEEe-eCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCC
Q 017102          158 GDGVSHTVPI-YEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS  236 (377)
Q Consensus       158 G~~~t~v~pv-~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~  236 (377)
                      |+++|+++++ .+|....+   ..++||+++++++.+++.++. .+.  .+.+.++++|+++|++..+.+..  .... .
T Consensus       156 Gggttdvs~v~~~~~~~~~---~~~lGG~~id~~l~~~l~~~~-~~~--~~~~~ae~iK~~~~~~~~~~~~~--~~~~-~  226 (334)
T PRK13927        156 GGGTTEVAVISLGGIVYSK---SVRVGGDKFDEAIINYVRRNY-NLL--IGERTAERIKIEIGSAYPGDEVL--EMEV-R  226 (334)
T ss_pred             CCCeEEEEEEecCCeEeeC---CcCChHHHHHHHHHHHHHHHh-CcC--cCHHHHHHHHHHhhccCCCCCCc--eEEE-e
Confidence            9999999999 66655433   358999999999999986432 221  13457999999999875432100  0000 0


Q ss_pred             CccceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhc-CeEEecCCCCCCChHHHH
Q 017102          237 AVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIADRM  315 (377)
Q Consensus       237 ~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~-nIvl~GG~s~i~g~~~rl  315 (377)
                      .....+.+|+  .+.++.+++  .|++|.+      ..++.+.|.++|.+++.+.++.+++ +|+||||+|++|||.+||
T Consensus       227 ~~~~~~~~~~--~~~i~~~~~--~e~i~~~------~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipgl~~~l  296 (334)
T PRK13927        227 GRDLVTGLPK--TITISSNEI--REALQEP------LSAIVEAVKVALEQTPPELAADIVDRGIVLTGGGALLRGLDKLL  296 (334)
T ss_pred             CcccCCCCCe--EEEECHHHH--HHHHHHH------HHHHHHHHHHHHHHCCchhhhhhhcCCEEEECchhhhhHHHHHH
Confidence            0000011111  344444444  4777665      2358889999999999888888887 599999999999999999


Q ss_pred             HHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          316 SKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       316 ~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ++++.      .+++  ...+|..++-.||++++.-
T Consensus       297 ~~~~~------~~v~--~~~~P~~ava~Ga~~~~~~  324 (334)
T PRK13927        297 SEETG------LPVH--VAEDPLTCVARGTGKALEN  324 (334)
T ss_pred             HHHHC------CCcE--ecCCHHHHHHHHHHHHHhh
Confidence            99983      1333  3456789999999998753

>TIGR00904 mreB cell shape determining protein, MreB/Mrl family

Probab=100.00  E-value=1.6e-35  Score=277.88  Aligned_cols=310  Identities=17%  Similarity=0.217  Sum_probs=231.1

Q ss_pred             EEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcc----cCcceeeccccCCccCCHHHHH
Q 017102           10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWDDME   85 (377)
Q Consensus        10 vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~~~~~~~   85 (377)
                      +.||+||+++++...++ .-....||+++..++.+   +....-+++|++|...    .....+++|+++|.+.||+..+
T Consensus         5 ~giDlGt~~s~i~~~~~-~~~~~~psvv~~~~~~~---~~~~~~~~vG~~A~~~~~~~~~~~~~~~pi~~G~i~d~~~~~   80 (333)
T TIGR00904         5 IGIDLGTANTLVYVKGR-GIVLNEPSVVAIRTDRD---AKTKSILAVGHEAKEMLGKTPGNIVAIRPMKDGVIADFEVTE   80 (333)
T ss_pred             eEEecCcceEEEEECCC-CEEEecCCEEEEecCCC---CCCCeEEEEhHHHHHhhhcCCCCEEEEecCCCCEEEcHHHHH
Confidence            99999999999865433 23345689887764321   1012346799998876    2456789999999999999999


Q ss_pred             HHHHHhcccccccCCCC-CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCC
Q 017102           86 KIWHHTFYNELRVAPEE-HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGD  159 (377)
Q Consensus        86 ~~~~~~~~~~L~~~~~~-~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~  159 (377)
                      .+|++++.+.+...... .++++++|..++..+|+. ++.+|+.+|++.+.++++|+||++++|.     .+++|||+|+
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~-~~~~~~~ag~~~~~li~ep~aaa~~~g~~~~~~~~~lVvDiG~  159 (333)
T TIGR00904        81 KMIKYFIKQVHSRKSFFKPRIVICVPSGITPVERRA-VKESALSAGAREVYLIEEPMAAAIGAGLPVEEPTGSMVVDIGG  159 (333)
T ss_pred             HHHHHHHHHHhcccccCCCcEEEEeCCCCCHHHHHH-HHHHHHHcCCCeEEEecCHHHHHHhcCCcccCCceEEEEEcCC
Confidence            99999997665532222 369999999999999988 5557799999999999999999999997     6789999999


Q ss_pred             CceEEEEe-eCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCc
Q 017102          160 GVSHTVPI-YEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAV  238 (377)
Q Consensus       160 ~~t~v~pv-~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~  238 (377)
                      ++|++++| .+|.....   ..++||+++++++.+++.++. ..  ..+.+.++++|+++|++..+..+... ... ...
T Consensus       160 gttdvs~v~~~~~~~~~---~~~lGG~did~~l~~~l~~~~-~~--~~~~~~ae~lK~~l~~~~~~~~~~~~-~~~-~~~  231 (333)
T TIGR00904       160 GTTEVAVISLGGIVVSR---SIRVGGDEFDEAIINYIRRTY-NL--LIGEQTAERIKIEIGSAYPLNDEPRK-MEV-RGR  231 (333)
T ss_pred             CeEEEEEEEeCCEEecC---CccchHHHHHHHHHHHHHHHh-cc--cCCHHHHHHHHHHHhccccccccccc-eee-cCc
Confidence            99999999 66665543   348999999999999886432 11  11346799999999987654211110 000 001


Q ss_pred             cceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhc-CeEEecCCCCCCChHHHHHH
Q 017102          239 EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIADRMSK  317 (377)
Q Consensus       239 ~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~-nIvl~GG~s~i~g~~~rl~~  317 (377)
                      ...+.+|++.  .++  +..+.|++|.|      ..++.+.|.+++.+++.+.+..+++ +|+||||+|++|||.+||++
T Consensus       232 ~~~~~~~~~~--~i~--~~~~~e~i~~~------~~~i~~~i~~~l~~~~~~~~~~l~~~~IvL~GGss~ipgl~e~l~~  301 (333)
T TIGR00904       232 DLVTGLPRTI--EIT--SVEVREALQEP------VNQIVEAVKRTLEKTPPELAADIVERGIVLTGGGALLRNLDKLLSK  301 (333)
T ss_pred             cccCCCCeEE--EEC--HHHHHHHHHHH------HHHHHHHHHHHHHhCCchhhhhhccCCEEEECcccchhhHHHHHHH
Confidence            1123344443  333  22566888876      2358888999999999888888886 79999999999999999999


Q ss_pred             HHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          318 EISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       318 el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      ++.        +.+....+|..++-.||++++.
T Consensus       302 ~~~--------~~v~~~~~P~~~va~Ga~~~~~  326 (333)
T TIGR00904       302 ETG--------LPVIVADDPLLCVAKGTGKALE  326 (333)
T ss_pred             HHC--------CCceecCChHHHHHHHHHHHHh
Confidence            993        2334456788999999999864

A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.

>PRK13929 rod-share determining protein MreBH; Provisional

Probab=100.00  E-value=1.3e-34  Score=271.29  Aligned_cols=302  Identities=17%  Similarity=0.323  Sum_probs=228.3

Q ss_pred             cEEEeCCCCceEEeeeCCCCCC-CCCCceEEeeCCCCccccCCCccceeccchhccc----CcceeeccccCCccCCHHH
Q 017102            9 PLVCDNGTGMVKAGFAGDDAPR-AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P~-~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~~~~~   83 (377)
                      .+.||+||+++++ |.. ..+. ...||+++.....       ..-.+||++|....    ....+.+|+++|.+.||+.
T Consensus         6 ~~giDlGt~~~~i-~~~-~~~~~~~~ps~va~~~~~-------~~~~~vG~~A~~~~~~~p~~~~~~~pi~~G~I~d~d~   76 (335)
T PRK13929          6 EIGIDLGTANILV-YSK-NKGIILNEPSVVAVDTET-------KAVLAIGTEAKNMIGKTPGKIVAVRPMKDGVIADYDM   76 (335)
T ss_pred             eEEEEcccccEEE-EEC-CCcEEecCCcEEEEECCC-------CeEEEeCHHHHHhhhcCCCcEEEEecCCCCccCCHHH
Confidence            5999999999998 332 2232 3468888764321       12357999998763    4466789999999999999


Q ss_pred             HHHHHHHhccc---ccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcC-----CceEEEE
Q 017102           84 MEKIWHHTFYN---ELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG-----RTTGIVL  155 (377)
Q Consensus        84 ~~~~~~~~~~~---~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-----~~~~lVV  155 (377)
                      .+.+|++++.+   .++......++++++|+.++..+|+.+.+ +++.+|++.+.++++|+||++++|     ..+++||
T Consensus        77 ~~~~l~~~~~~~~~~l~~~~~~~~vvitvP~~~~~~~R~~l~~-a~~~ag~~~~~li~ep~Aaa~~~g~~~~~~~~~lvv  155 (335)
T PRK13929         77 TTDLLKQIMKKAGKNIGMTFRKPNVVVCTPSGSTAVERRAISD-AVKNCGAKNVHLIEEPVAAAIGADLPVDEPVANVVV  155 (335)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCCeEEEEcCCCCCHHHHHHHHH-HHHHcCCCeeEeecCHHHHHHhcCCCcCCCceEEEE
Confidence            99999999863   46665656789999999999999999999 779999999999999999999997     4679999


Q ss_pred             eCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccC
Q 017102          156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS  235 (377)
Q Consensus       156 DiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~  235 (377)
                      |+|+++|+++++..|..+  .....++||++++++|.+++.+. +.+..  +...++++|+++|++..+..++..  .. 
T Consensus       156 DiG~gtt~v~vi~~~~~~--~~~~~~~GG~~id~~l~~~l~~~-~~~~~--~~~~AE~iK~~l~~~~~~~~~~~~--~v-  227 (335)
T PRK13929        156 DIGGGTTEVAIISFGGVV--SCHSIRIGGDQLDEDIVSFVRKK-YNLLI--GERTAEQVKMEIGYALIEHEPETM--EV-  227 (335)
T ss_pred             EeCCCeEEEEEEEeCCEE--EecCcCCHHHHHHHHHHHHHHHH-hCcCc--CHHHHHHHHHHHcCCCCCCCCceE--EE-
Confidence            999999999999555444  23456899999999999998653 22222  346799999999987544221100  00 


Q ss_pred             CCccceEEcCCCceEeeCCcccc--ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhc-CeEEecCCCCCCChH
Q 017102          236 SAVEKSYELPDGQVITIGAERFR--CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIA  312 (377)
Q Consensus       236 ~~~~~~~~~pd~~~i~i~~~~~~--~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~-nIvl~GG~s~i~g~~  312 (377)
                      ......+.+|  ..+.++.+++.  +.|.+|+          +.+.|.++|.+++.+.+..+++ +|+||||+|++|||.
T Consensus       228 ~g~~~~~~~p--~~i~i~~~~~~~~i~~~l~~----------i~~~i~~~L~~~~~~l~~~~~~~gIvLtGG~s~lpgl~  295 (335)
T PRK13929        228 RGRDLVTGLP--KTITLESKEIQGAMRESLLH----------ILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIK  295 (335)
T ss_pred             eCCccCCCCC--eEEEEcHHHHHHHHHHHHHH----------HHHHHHHHHHhCCcccchhhcCCCEEEEchhhhhhhHH
Confidence            0000011122  35666666665  4666654          8899999999999999988998 699999999999999


Q ss_pred             HHHHHHHhhhCCCCceEEEECCCCCccccchhhHHh
Q 017102          313 DRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSIL  348 (377)
Q Consensus       313 ~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~  348 (377)
                      ++|++++..      +++  ...+|..++-.|+..+
T Consensus       296 e~l~~~~~~------~v~--~~~~P~~~Va~Ga~~~  323 (335)
T PRK13929        296 EWLSEEIVV------PVH--VAANPLESVAIGTGRS  323 (335)
T ss_pred             HHHHHHHCC------Cce--eCCCHHHHHHHHHHHH
Confidence            999999942      333  3467889999998776

>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes

Probab=100.00  E-value=7.4e-33  Score=253.82  Aligned_cols=305  Identities=18%  Similarity=0.264  Sum_probs=217.7

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcc----cCcceeeccccCCccCCHHH
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~~~~~   83 (377)
                      +.+.||+||.+|++ |..+..=.+..||+++..+..       ..-..+|++|..+    .....+.+|+++|.|.|++.
T Consensus         2 ~~igIDLGT~~t~i-~~~~~Giv~~epSvVA~~~~~-------~~i~avG~~A~~m~gktp~~i~~~~Pl~~GvI~D~~~   73 (326)
T PF06723_consen    2 KDIGIDLGTSNTRI-YVKGKGIVLNEPSVVAYDKDT-------GKILAVGDEAKAMLGKTPDNIEVVRPLKDGVIADYEA   73 (326)
T ss_dssp             SEEEEEE-SSEEEE-EETTTEEEEEEES-EEEETTT---------EEEESHHHHTTTTS-GTTEEEE-SEETTEESSHHH
T ss_pred             CceEEecCcccEEE-EECCCCEEEecCcEEEEECCC-------CeEEEEhHHHHHHhhcCCCccEEEccccCCcccCHHH
Confidence            56899999999999 444443334568888877653       3345689999876    34578999999999999999


Q ss_pred             HHHHHHHhccccccc-CCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeC
Q 017102           84 MEKIWHHTFYNELRV-APEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDS  157 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~-~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi  157 (377)
                      .+.++++++.+.++. ......++++.|...+..+|+.+.+.+ ..+|+..|+++++|+||++++|.     ...+||||
T Consensus        74 ~~~~l~~~l~k~~~~~~~~~p~vvi~vP~~~T~verrA~~~a~-~~aGa~~V~li~ep~AaAiGaGl~i~~~~g~miVDI  152 (326)
T PF06723_consen   74 AEEMLRYFLKKALGRRSFFRPRVVICVPSGITEVERRALIDAA-RQAGARKVYLIEEPIAAAIGAGLDIFEPRGSMIVDI  152 (326)
T ss_dssp             HHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHH-HHTT-SEEEEEEHHHHHHHHTT--TTSSS-EEEEEE
T ss_pred             HHHHHHHHHHHhccCCCCCCCeEEEEeCCCCCHHHHHHHHHHH-HHcCCCEEEEecchHHHHhcCCCCCCCCCceEEEEE
Confidence            999999999666654 345667999999999999999999999 56999999999999999999985     47899999


Q ss_pred             CCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCC
Q 017102          158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSA  237 (377)
Q Consensus       158 G~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~  237 (377)
                      |+++|+++.+..|.++  ..+.+++||+++++.+.+++++++ ++.  .....+|++|.+++++....++.  ..     
T Consensus       153 G~GtTdiavislggiv--~s~si~~gG~~~DeaI~~~ir~~y-~l~--Ig~~tAE~iK~~~g~~~~~~~~~--~~-----  220 (326)
T PF06723_consen  153 GGGTTDIAVISLGGIV--ASRSIRIGGDDIDEAIIRYIREKY-NLL--IGERTAEKIKIEIGSASPPEEEE--SM-----  220 (326)
T ss_dssp             -SS-EEEEEEETTEEE--EEEEES-SHHHHHHHHHHHHHHHH-SEE----HHHHHHHHHHH-BSS--HHHH--EE-----
T ss_pred             CCCeEEEEEEECCCEE--EEEEEEecCcchhHHHHHHHHHhh-Ccc--cCHHHHHHHHHhcceeeccCCCc--eE-----
Confidence            9999999999999998  678899999999999999998654 222  25678999999999875433221  10     


Q ss_pred             ccceEEcCCCceE--eeCC-ccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhc-CeEEecCCCCCCChHH
Q 017102          238 VEKSYELPDGQVI--TIGA-ERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIAD  313 (377)
Q Consensus       238 ~~~~~~~pd~~~i--~i~~-~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~-nIvl~GG~s~i~g~~~  313 (377)
                      .-....+-+|...  .++. +-..+.+..+..         +.+.|.++|.++|.++...+++ +|+||||+|+++||.+
T Consensus       221 ~v~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~---------I~~~i~~~Le~~pPel~~DI~~~GI~LtGGga~l~Gl~~  291 (326)
T PF06723_consen  221 EVRGRDLITGLPKSIEITSSEVREAIEPPVDQ---------IVEAIKEVLEKTPPELAADILENGIVLTGGGALLRGLDE  291 (326)
T ss_dssp             EEEEEETTTTCEEEEEEEHHHHHHHHHHHHHH---------HHHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHH
T ss_pred             EEECccccCCCcEEEEEcHHHHHHHHHHHHHH---------HHHHHHHHHHhCCHHHHHHHHHCCEEEEChhhhhccHHH
Confidence            0111122334322  2321 222333333333         8899999999999999988775 5999999999999999


Q ss_pred             HHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          314 RMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       314 rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +|++++        .+.+...++|..++-.|+..+..
T Consensus       292 ~i~~~~--------~~pV~va~~P~~~va~G~~~~l~  320 (326)
T PF06723_consen  292 YISEET--------GVPVRVADDPLTAVARGAGKLLE  320 (326)
T ss_dssp             HHHHHH--------SS-EEE-SSTTTHHHHHHHHTTC
T ss_pred             HHHHHH--------CCCEEEcCCHHHHHHHHHHHHHh
Confidence            999999        34555567889999999877654

In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.

>PRK13928 rod shape-determining protein Mbl; Provisional

Probab=99.98  E-value=1.4e-31  Score=251.36  Aligned_cols=305  Identities=18%  Similarity=0.284  Sum_probs=218.7

Q ss_pred             EEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhccc----CcceeeccccCCccCCHHHHH
Q 017102           10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDDME   85 (377)
Q Consensus        10 vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~~~~~~~   85 (377)
                      +.||+||.++++...++ .-.+..||.++.....       +.-..+|++|.+..    ....+.+|+++|.+.||+..+
T Consensus         6 ~gIDlGt~~~~i~~~~~-~~v~~~psvv~~~~~~-------~~i~~vG~~A~~~~~~~p~~~~~~~pi~~G~i~d~~~~~   77 (336)
T PRK13928          6 IGIDLGTANVLVYVKGK-GIVLNEPSVVAIDKNT-------NKVLAVGEEARRMVGRTPGNIVAIRPLRDGVIADYDVTE   77 (336)
T ss_pred             eEEEcccccEEEEECCC-CEEEccCCEEEEECCC-------CeEEEecHHHHHhhhcCCCCEEEEccCCCCeEecHHHHH
Confidence            99999999999965533 2333568888765332       12357899987762    345677999999999999999


Q ss_pred             HHHHHhcccccccC-CCCCc-EEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCC
Q 017102           86 KIWHHTFYNELRVA-PEEHP-ILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSG  158 (377)
Q Consensus        86 ~~~~~~~~~~L~~~-~~~~~-vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG  158 (377)
                      .+|++++ +.+... ...+| +++++|..++..+|+. ++.+++.+|++.+.++++|+||++++|.     .+++|||+|
T Consensus        78 ~~l~~~~-~~~~~~~~~~~p~~vitvP~~~~~~~r~~-~~~a~~~ag~~~~~li~ep~Aaa~~~g~~~~~~~~~lVvDiG  155 (336)
T PRK13928         78 KMLKYFI-NKACGKRFFSKPRIMICIPTGITSVEKRA-VREAAEQAGAKKVYLIEEPLAAAIGAGLDISQPSGNMVVDIG  155 (336)
T ss_pred             HHHHHHH-HHHhccCCCCCCeEEEEeCCCCCHHHHHH-HHHHHHHcCCCceEecccHHHHHHHcCCcccCCCeEEEEEeC
Confidence            9999998 444332 34566 8899988877765555 5555699999999999999999999986     679999999


Q ss_pred             CCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCc
Q 017102          159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAV  238 (377)
Q Consensus       159 ~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~  238 (377)
                      +++|+++++..|..+.  ....++||+++++.+.+++.++. .+.  .....++++|++++.+..+..++  .... ...
T Consensus       156 ggttdvsvv~~g~~~~--~~~~~lGG~did~~i~~~l~~~~-~~~--~~~~~ae~lK~~~~~~~~~~~~~--~~~v-~g~  227 (336)
T PRK13928        156 GGTTDIAVLSLGGIVT--SSSIKVAGDKFDEAIIRYIRKKY-KLL--IGERTAEEIKIKIGTAFPGAREE--EMEI-RGR  227 (336)
T ss_pred             CCeEEEEEEEeCCEEE--eCCcCCHHHHHHHHHHHHHHHHh-chh--cCHHHHHHHHHHhcccccccCCc--EEEE-ecc
Confidence            9999999999997774  34679999999999999986432 221  12356999999988764321100  0000 000


Q ss_pred             cceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhc-CeEEecCCCCCCChHHHHHH
Q 017102          239 EKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYG-NIVLSGGSTMFPGIADRMSK  317 (377)
Q Consensus       239 ~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~-nIvl~GG~s~i~g~~~rl~~  317 (377)
                      .....+|.  .+.++.+++.  |+++.+      ...+.+.|.+++.+++.+.+...++ +|+||||+|++||+.++|++
T Consensus       228 ~~~~~~~~--~~~i~~~~~~--eii~~~------~~~i~~~i~~~l~~~~~~~~~~~i~~~IvL~GG~s~ipgi~e~l~~  297 (336)
T PRK13928        228 DLVTGLPK--TITVTSEEIR--EALKEP------VSAIVQAVKSVLERTPPELSADIIDRGIIMTGGGALLHGLDKLLAE  297 (336)
T ss_pred             cccCCCce--EEEECHHHHH--HHHHHH------HHHHHHHHHHHHHhCCccccHhhcCCCEEEECcccchhhHHHHHHH
Confidence            00001111  2334433332  444433      1237788889999998888888887 79999999999999999999


Q ss_pred             HHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          318 EISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       318 el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      ++..      +++  ...+|..++-.||++++.
T Consensus       298 ~~~~------~v~--~~~~P~~ava~Gaa~~~~  322 (336)
T PRK13928        298 ETKV------PVY--IAEDPISCVALGTGKMLE  322 (336)
T ss_pred             HHCC------Cce--ecCCHHHHHHHHHHHHHh
Confidence            9942      233  345788999999999864

>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]

Probab=99.95  E-value=7e-27  Score=206.61  Aligned_cols=310  Identities=18%  Similarity=0.219  Sum_probs=226.6

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcc----cCcceeeccccCCccCCHH
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK----RGILTLKYPIEHGIVSNWD   82 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~----~~~~~~~~p~~~g~i~~~~   82 (377)
                      .+.|.||+||.+|++- .-+..--...||.++......     ...-..+|++|+.+    .+.....+|+++|++.|++
T Consensus         6 s~diGIDLGTanTlV~-~k~kgIVl~ePSVVAi~~~~~-----~~~v~aVG~eAK~MlGrTP~ni~aiRPmkdGVIAd~~   79 (342)
T COG1077           6 SNDIGIDLGTANTLVY-VKGKGIVLNEPSVVAIESEGK-----TKVVLAVGEEAKQMLGRTPGNIVAIRPMKDGVIADFE   79 (342)
T ss_pred             cccceeeecccceEEE-EcCceEEecCceEEEEeecCC-----CceEEEehHHHHHHhccCCCCceEEeecCCcEeecHH
Confidence            4589999999999994 333344446788887765311     23356799999987    3456789999999999999


Q ss_pred             HHHHHHHHhcccccccC--CCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEE
Q 017102           83 DMEKIWHHTFYNELRVA--PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVL  155 (377)
Q Consensus        83 ~~~~~~~~~~~~~L~~~--~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVV  155 (377)
                      ..+.+++|..++..+-.  ...-+++++.|.-....+|+.+.+.+ +..+...|+++++|.+|++++|.     +..+||
T Consensus        80 ~te~ml~~fik~~~~~~~~~~~prI~i~vP~g~T~VErrAi~ea~-~~aGa~~V~lieEp~aAAIGaglpi~ep~G~mvv  158 (342)
T COG1077          80 VTELMLKYFIKKVHKNGSSFPKPRIVICVPSGITDVERRAIKEAA-ESAGAREVYLIEEPMAAAIGAGLPIMEPTGSMVV  158 (342)
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCcEEEEecCCccHHHHHHHHHHH-HhccCceEEEeccHHHHHhcCCCcccCCCCCEEE
Confidence            99999998875444222  23345899999999999999999999 77999999999999999999986     458999


Q ss_pred             eCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccC
Q 017102          156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS  235 (377)
Q Consensus       156 DiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~  235 (377)
                      |||+++|+|+.+..|-++  ...+..+||+.+++.+.+++++++.-..   ....++++|.+.+++..+...+..+..- 
T Consensus       159 DIGgGTTevaVISlggiv--~~~Sirv~GD~~De~Ii~yvr~~~nl~I---Ge~taE~iK~eiG~a~~~~~~~~~~~eV-  232 (342)
T COG1077         159 DIGGGTTEVAVISLGGIV--SSSSVRVGGDKMDEAIIVYVRKKYNLLI---GERTAEKIKIEIGSAYPEEEDEELEMEV-  232 (342)
T ss_pred             EeCCCceeEEEEEecCEE--EEeeEEEecchhhHHHHHHHHHHhCeee---cHHHHHHHHHHhcccccccCCccceeeE-
Confidence            999999999999999888  6678899999999999999976533322   3456999999999886532211000000 


Q ss_pred             CCccceEEcCCCceEeeCCc--cccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcC-eEEecCCCCCCChH
Q 017102          236 SAVEKSYELPDGQVITIGAE--RFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGN-IVLSGGSTMFPGIA  312 (377)
Q Consensus       236 ~~~~~~~~~pd~~~i~i~~~--~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~n-Ivl~GG~s~i~g~~  312 (377)
                      ......--+|.  .+.++.+  +....|.+          ..|.+.|...+.++|.++-....++ |++|||+|++.|++
T Consensus       233 ~Grdl~~GlPk--~i~i~s~ev~eal~~~v----------~~Iveair~~Le~tpPeL~~DI~ergivltGGGalLrglD  300 (342)
T COG1077         233 RGRDLVTGLPK--TITINSEEIAEALEEPL----------NGIVEAIRLVLEKTPPELAADIVERGIVLTGGGALLRGLD  300 (342)
T ss_pred             EeeecccCCCe--eEEEcHHHHHHHHHHHH----------HHHHHHHHHHHhhCCchhcccHhhCceEEecchHHhcCch
Confidence            00000001111  1222221  11222222          3488888899999999999999998 99999999999999


Q ss_pred             HHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102          313 DRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       313 ~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      +.|.+|.        .+.++-.++|-..+-+|+....
T Consensus       301 ~~i~~et--------~~pv~ia~~pL~~Va~G~G~~l  329 (342)
T COG1077         301 RLLSEET--------GVPVIIADDPLTCVAKGTGKAL  329 (342)
T ss_pred             HhHHhcc--------CCeEEECCChHHHHHhccchhh
Confidence            9999887        4555556778777777765543

>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein

Probab=99.88  E-value=9.4e-22  Score=175.06  Aligned_cols=210  Identities=16%  Similarity=0.188  Sum_probs=158.3

Q ss_pred             eccccCCccCCHHHHHHHHHHhcccc-cccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcC
Q 017102           70 KYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG  148 (377)
Q Consensus        70 ~~p~~~g~i~~~~~~~~~~~~~~~~~-L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g  148 (377)
                      ..|+++|.|.|++..+.+++++.... -.....-..+++++|..++..+|+.+.+.+ +..|++.+.++++|+|++++++
T Consensus        28 ~~~~~~g~I~d~~~~~~~l~~l~~~a~~~~g~~~~~vvisVP~~~~~~~r~a~~~a~-~~aGl~~~~li~ep~Aaa~~~~  106 (239)
T TIGR02529        28 ADVVRDGIVVDFLGAVEIVRRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVI-ESAGIEVLHVLDEPTAAAAVLQ  106 (239)
T ss_pred             cccccCCeEEEhHHHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCcccHHHHHHHH-HHcCCceEEEeehHHHHHHHhc
Confidence            57899999999999999999997321 112223468999999999999999888777 8899999999999999999988


Q ss_pred             CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHH
Q 017102          149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE  228 (377)
Q Consensus       149 ~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~  228 (377)
                      ....+|+|+|+++|+++.+.+|.++  .....++||+++++.+.+.+.         .+.+.+|++|..++.    . ++
T Consensus       107 ~~~~~vvDiGggtt~i~i~~~G~i~--~~~~~~~GG~~it~~Ia~~~~---------i~~~~AE~~K~~~~~----~-~~  170 (239)
T TIGR02529       107 IKNGAVVDVGGGTTGISILKKGKVI--YSADEPTGGTHMSLVLAGAYG---------ISFEEAEEYKRGHKD----E-EE  170 (239)
T ss_pred             CCCcEEEEeCCCcEEEEEEECCeEE--EEEeeecchHHHHHHHHHHhC---------CCHHHHHHHHHhcCC----H-HH
Confidence            8888999999999999999999888  567789999999999876652         134668888887552    1 11


Q ss_pred             HHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCC
Q 017102          229 LETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF  308 (377)
Q Consensus       229 ~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i  308 (377)
                      ..                           ...+.+..         .+.+.|.+.+.+.+.       +.|+||||+|++
T Consensus       171 ~~---------------------------~~i~~~~~---------~i~~~i~~~l~~~~~-------~~v~LtGG~a~i  207 (239)
T TIGR02529       171 IF---------------------------PVVKPVYQ---------KMASIVKRHIEGQGV-------KDLYLVGGACSF  207 (239)
T ss_pred             HH---------------------------HHHHHHHH---------HHHHHHHHHHHhCCC-------CEEEEECchhcc
Confidence            10                           00011111         144455555554433       479999999999


Q ss_pred             CChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHH
Q 017102          309 PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSI  347 (377)
Q Consensus       309 ~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi  347 (377)
                      ||+.+.|++.+.        +.+..+.+|.+++-.|+++
T Consensus       208 pgl~e~l~~~lg--------~~v~~~~~P~~~va~Gaa~  238 (239)
T TIGR02529       208 SGFADVFEKQLG--------LNVIKPQHPLYVTPLGIAM  238 (239)
T ss_pred             hhHHHHHHHHhC--------CCcccCCCCCeehhheeec
Confidence            999999999883        2233467889999999864

>PRK15080 ethanolamine utilization protein EutJ; Provisional

Probab=99.83  E-value=6.3e-19  Score=159.67  Aligned_cols=243  Identities=15%  Similarity=0.141  Sum_probs=172.4

Q ss_pred             CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHHH
Q 017102            5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDM   84 (377)
Q Consensus         5 ~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~~   84 (377)
                      ...-.++||+||+.+|+=.+ +..+.     .++                 +|.         ..+.+++.|.+.|++..
T Consensus        22 ~~~~~~~iDiGSssi~~vv~-~~~~~-----~~~-----------------~~~---------~~~~~vr~G~i~di~~a   69 (267)
T PRK15080         22 ESPLKVGVDLGTANIVLAVL-DEDGQ-----PVA-----------------GAL---------EWADVVRDGIVVDFIGA   69 (267)
T ss_pred             CCCEEEEEEccCceEEEEEE-cCCCC-----EEE-----------------EEe---------ccccccCCCEEeeHHHH
Confidence            34566999999999997554 32222     111                 121         23567899999999998


Q ss_pred             HHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCc
Q 017102           85 EKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGV  161 (377)
Q Consensus        85 ~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~  161 (377)
                      .+.++++..   +.++..  -..++++.|.......+..+.+++ +..|++...++.++.+++.+++...++|||+|+++
T Consensus        70 ~~~i~~~~~~ae~~~g~~--i~~v~~~vp~~~~~~~~~~~~~~~-~~aGl~~~~ii~e~~A~a~~~~~~~~~vvDIGggt  146 (267)
T PRK15080         70 VTIVRRLKATLEEKLGRE--LTHAATAIPPGTSEGDPRAIINVV-ESAGLEVTHVLDEPTAAAAVLGIDNGAVVDIGGGT  146 (267)
T ss_pred             HHHHHHHHHHHHHHhCCC--cCeEEEEeCCCCCchhHHHHHHHH-HHcCCceEEEechHHHHHHHhCCCCcEEEEeCCCc
Confidence            888888763   133432  356778899888777788777555 88999999999999999998887778999999999


Q ss_pred             eEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccce
Q 017102          162 SHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS  241 (377)
Q Consensus       162 t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~  241 (377)
                      |+++.+.+|.++  .....++||+++++.+.+.+.   .      +.+.+|++|.....    . ++..           
T Consensus       147 t~i~v~~~g~~~--~~~~~~~GG~~it~~Ia~~l~---i------~~~eAE~lK~~~~~----~-~~~~-----------  199 (267)
T PRK15080        147 TGISILKDGKVV--YSADEPTGGTHMSLVLAGAYG---I------SFEEAEQYKRDPKH----H-KEIF-----------  199 (267)
T ss_pred             EEEEEEECCeEE--EEecccCchHHHHHHHHHHhC---C------CHHHHHHHHhccCC----H-HHHH-----------
Confidence            999999999887  456789999999999987762   1      34567888876431    0 0000           


Q ss_pred             EEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhh
Q 017102          242 YELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISA  321 (377)
Q Consensus       242 ~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~  321 (377)
                                      .+.+.++..         +.+.|.+.+.+.       -.+.|+||||+|++||+.+.+++.+..
T Consensus       200 ----------------~ii~~~~~~---------i~~~i~~~l~~~-------~~~~IvLtGG~s~lpgl~e~l~~~lg~  247 (267)
T PRK15080        200 ----------------PVVKPVVEK---------MASIVARHIEGQ-------DVEDIYLVGGTCCLPGFEEVFEKQTGL  247 (267)
T ss_pred             ----------------HHHHHHHHH---------HHHHHHHHHhcC-------CCCEEEEECCcccchhHHHHHHHHhCC
Confidence                            000111111         334444444432       346899999999999999999999832


Q ss_pred             hCCCCceEEEECCCCCccccchhhHHhh
Q 017102          322 LAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       322 ~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                            +++  .+++|.+++-.|+++|+
T Consensus       248 ------~v~--~~~~P~~~~a~Gaa~~~  267 (267)
T PRK15080        248 ------PVH--KPQHPLFVTPLGIALSC  267 (267)
T ss_pred             ------Ccc--cCCCchHHHHHHHHhhC
Confidence                  222  35788999999998874

>TIGR01991 HscA Fe-S protein assembly chaperone HscA

Probab=99.82  E-value=4.5e-20  Score=185.18  Aligned_cols=300  Identities=21%  Similarity=0.218  Sum_probs=180.1

Q ss_pred             cEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeec---
Q 017102            9 PLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKY---   71 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~---   71 (377)
                      +|.||+||+++.+++..+..|.        ..+||+++...+         ....||..|...      .....+++   
T Consensus         1 ~iGIDlGTtns~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~---------~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG   71 (599)
T TIGR01991         1 AVGIDLGTTNSLVASVRSGVPEVLPDAEGRVLLPSVVRYLKD---------GGVEVGKEALAAAAEDPKNTISSVKRLMG   71 (599)
T ss_pred             CEEEEEccccEEEEEEECCEEEEEECCCCCcccCeEEEEeCC---------CCEEecHHHHHhhhhChhhhHHHHHHHhC
Confidence            4899999999999987655444        345666655322         245677766432      01111111   


Q ss_pred             ------------cc--------------cCCccCCHHHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHHHHHH
Q 017102           72 ------------PI--------------EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANREKMT  122 (377)
Q Consensus        72 ------------p~--------------~~g~i~~~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~~~l~  122 (377)
                                  |+              ..+.+.-.+....+++++..   ..++.  .-..+|+++|..++..+|+.+.
T Consensus        72 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ei~a~iL~~lk~~a~~~lg~--~v~~~VItVPa~f~~~qR~a~~  149 (599)
T TIGR01991        72 RSIEDIKTFSILPYRFVDGPGEMVRLRTVQGTVTPVEVSAEILKKLKQRAEESLGG--DLVGAVITVPAYFDDAQRQATK  149 (599)
T ss_pred             CCccchhhcccCCEEEEEcCCCceEEEeCCCEEcHHHHHHHHHHHHHHHHHHHhCC--CcceEEEEECCCCCHHHHHHHH
Confidence                        11              11222223334445544421   23332  2357999999999999999988


Q ss_pred             hhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEee--CCee-cCCceEEEcccHHHHHHHHHHH
Q 017102          123 QIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKI  194 (377)
Q Consensus       123 ~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~~GG~~l~~~l~~~  194 (377)
                      +.+ +.+|++.+.++++|.||+++++.     .+.+|+|+|+++++|+.+.  +|.. +..+.....+||.++++.|.++
T Consensus       150 ~Aa-~~AGl~v~~li~EPtAAAlay~~~~~~~~~vlV~DlGgGT~DvSi~~~~~~~~~vla~~gd~~lGG~d~D~~l~~~  228 (599)
T TIGR01991       150 DAA-RLAGLNVLRLLNEPTAAAVAYGLDKASEGIYAVYDLGGGTFDVSILKLTKGVFEVLATGGDSALGGDDFDHALAKW  228 (599)
T ss_pred             HHH-HHcCCCceEEecCHHHHHHHHhhccCCCCEEEEEEcCCCeEEEEEEEEcCCeEEEEEEcCCCCCCHHHHHHHHHHH
Confidence            887 88999999999999999998863     4689999999999998774  3322 1122234589999999999998


Q ss_pred             HHhc-CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCC
Q 017102          195 LTER-GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSM  268 (377)
Q Consensus       195 l~~~-~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~  268 (377)
                      +.++ +.+......     ...++..|+.++.              .......+.. +|..+.+.-.|..+ |-++.|- 
T Consensus       229 l~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~--------------~~~~~i~i~~-~g~~~~~~itr~ef-e~l~~~l-  291 (599)
T TIGR01991       229 ILKQLGISADLNPEDQRLLLQAARAAKEALTD--------------AESVEVDFTL-DGKDFKGKLTRDEF-EALIQPL-  291 (599)
T ss_pred             HHHhhCCCCCCCHHHHHHHHHHHHHHHHhCCC--------------CceEEEEEEE-CCcEEEEEEeHHHH-HHHHHHH-
Confidence            8654 332211111     1123444444331              1111122222 33333332222222 2222220 


Q ss_pred             CCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHh
Q 017102          269 IGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSIL  348 (377)
Q Consensus       269 ~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~  348 (377)
                          ...+.+.|.+++....  +...-++.|+||||+|++|++++.+++.+..        .+....+|+.++-.||+++
T Consensus       292 ----l~~i~~~i~~~L~~a~--~~~~~id~ViLvGGssriP~V~~~l~~~f~~--------~~~~~~npdeaVA~GAai~  357 (599)
T TIGR01991       292 ----VQKTLSICRRALRDAG--LSVEEIKGVVLVGGSTRMPLVRRAVAELFGQ--------EPLTDIDPDQVVALGAAIQ  357 (599)
T ss_pred             ----HHHHHHHHHHHHHHcC--CChhhCCEEEEECCcCCChHHHHHHHHHhCC--------CCCCCCCCcHHHHHHHHHH
Confidence                0014445555554432  2234468899999999999999999877632        1223467899999999999


Q ss_pred             hcc
Q 017102          349 ASL  351 (377)
Q Consensus       349 a~l  351 (377)
                      |..
T Consensus       358 a~~  360 (599)
T TIGR01991       358 ADL  360 (599)
T ss_pred             HHH
Confidence            875

The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.

>CHL00094 dnaK heat shock protein 70

Probab=99.82  E-value=1.3e-19  Score=182.84  Aligned_cols=297  Identities=19%  Similarity=0.220  Sum_probs=179.1

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeeccc
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI   73 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~   73 (377)
                      ..|.||+||+++++++..+..|.        ..+||+++...         +...++|+.|.+.      .....+++.+
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~---------~~~~~vG~~A~~~~~~~p~~ti~~~Krli   73 (621)
T CHL00094          3 KVVGIDLGTTNSVVAVMEGGKPTVIPNAEGFRTTPSIVAYTK---------KGDLLVGQIAKRQAVINPENTFYSVKRFI   73 (621)
T ss_pred             ceEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEcC---------CCCEEECHHHHHhHHhCccceehhhHHhc
Confidence            58999999999999998666554        23455554422         1235566655431      0111111111


Q ss_pred             c-------------------------------CC-ccCCHHHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHH
Q 017102           74 E-------------------------------HG-IVSNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR  118 (377)
Q Consensus        74 ~-------------------------------~g-~i~~~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~  118 (377)
                      .                               .| .+...+....+++++..   ..++.  .-..+|+++|..++..+|
T Consensus        74 G~~~~~~~~~~~~~~~~v~~~~~g~i~~~~~~~~~~~s~eei~a~iL~~l~~~ae~~lg~--~v~~~VItVPa~f~~~qR  151 (621)
T CHL00094         74 GRKFSEISEEAKQVSYKVKTDSNGNIKIECPALNKDFSPEEISAQVLRKLVEDASKYLGE--TVTQAVITVPAYFNDSQR  151 (621)
T ss_pred             CCChHHHHhhhhcCCeEEEECCCCCEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHH
Confidence            1                               11 12223334455555432   22322  235699999999999999


Q ss_pred             HHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCee---cCCceEEEcccHHHHHHH
Q 017102          119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYA---LPHAILRLDLAGRDLTDA  190 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~---l~~~~~~~~~GG~~l~~~  190 (377)
                      +.+.+.+ +..|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+..+..   +..+....++||.++++.
T Consensus       152 ~a~~~Aa-~~AGl~v~~li~EptAAAlay~~~~~~~~~vlV~DlGgGT~DvSv~~~~~~~~~vla~~gd~~lGG~d~D~~  230 (621)
T CHL00094        152 QATKDAG-KIAGLEVLRIINEPTAASLAYGLDKKNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDKK  230 (621)
T ss_pred             HHHHHHH-HHcCCceEEEeccHHHHHHHhccccCCCCEEEEEEcCCCeEEEEEEEEcCCEEEEEEEecCCCcChHHHHHH
Confidence            9988877 88999999999999999999874     46899999999999998754422   122233568999999999


Q ss_pred             HHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC------CC-ceEe--
Q 017102          191 LMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG-QVIT--  251 (377)
Q Consensus       191 l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------d~-~~i~--  251 (377)
                      |.+++.++     +.+......     ...++.+|..++...                ...+.+|      +| ..+.  
T Consensus       231 l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~----------------~~~i~i~~~~~~~~g~~~~~~~  294 (621)
T CHL00094        231 IVNWLIKEFKKKEGIDLSKDRQALQRLTEAAEKAKIELSNLT----------------QTEINLPFITATQTGPKHIEKT  294 (621)
T ss_pred             HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCC----------------ceEEEEeecccCCCCCeeEEEE
Confidence            99877543     222211100     133555666554210                1112111      01 1222  


Q ss_pred             eCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEE
Q 017102          252 IGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIK  330 (377)
Q Consensus       252 i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~  330 (377)
                      +...+|. ..+.++..         +...|.+++.+..  +...-++.|+||||+|++|++++.|++.+..        .
T Consensus       295 itR~~fe~l~~~l~~~---------~~~~i~~~L~~a~--~~~~~i~~ViLvGGssriP~v~~~l~~~fg~--------~  355 (621)
T CHL00094        295 LTRAKFEELCSDLINR---------CRIPVENALKDAK--LDKSDIDEVVLVGGSTRIPAIQELVKKLLGK--------K  355 (621)
T ss_pred             EcHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CChhhCcEEEEECCccCChHHHHHHHHHhCC--------C
Confidence            3333222 11222211         3334445554432  2334558899999999999999999887642        1


Q ss_pred             EECCCCCccccchhhHHhhcc
Q 017102          331 VVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       331 v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +....+|+.++..||+++|..
T Consensus       356 ~~~~~~pdeava~GAA~~aa~  376 (621)
T CHL00094        356 PNQSVNPDEVVAIGAAVQAGV  376 (621)
T ss_pred             cCcCCCchhHHHhhhHHHHHH
Confidence            233457789999999999874

>PTZ00400 DnaK-type molecular chaperone; Provisional

Probab=99.81  E-value=2.4e-19  Score=181.60  Aligned_cols=216  Identities=18%  Similarity=0.239  Sum_probs=141.4

Q ss_pred             CCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEee--CCee-c
Q 017102          102 EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-L  173 (377)
Q Consensus       102 ~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~--~g~~-l  173 (377)
                      -..+|+++|.+++..+|+.+.+.+ +..|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+.  +|.. +
T Consensus       174 v~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~v~~li~EptAAAlay~~~~~~~~~vlV~DlGgGT~DvSv~~~~~g~~~v  252 (663)
T PTZ00400        174 VKQAVITVPAYFNDSQRQATKDAG-KIAGLDVLRIINEPTAAALAFGMDKNDGKTIAVYDLGGGTFDISILEILGGVFEV  252 (663)
T ss_pred             CceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEeCchHHHHHHhccccCCCcEEEEEeCCCCeEEEEEEEecCCeeEE
Confidence            357999999999999999988877 88999999999999999999875     4789999999999998764  5533 2


Q ss_pred             CCceEEEcccHHHHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccce--
Q 017102          174 PHAILRLDLAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKS--  241 (377)
Q Consensus       174 ~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~--  241 (377)
                      ..+....++||.++++.|.+++.++     +.+......     ...++..|+.++.-              ......  
T Consensus       253 ~a~~gd~~LGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~--------------~~~~i~i~  318 (663)
T PTZ00400        253 KATNGNTSLGGEDFDQRILNYLIAEFKKQQGIDLKKDKLALQRLREAAETAKIELSSK--------------TQTEINLP  318 (663)
T ss_pred             EecccCCCcCHHHHHHHHHHHHHHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHcCCC--------------CceEEEEE
Confidence            2233456899999999999887643     222211100     12345555554321              001111  


Q ss_pred             EEcCC--C-c--eEeeCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHH
Q 017102          242 YELPD--G-Q--VITIGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM  315 (377)
Q Consensus       242 ~~~pd--~-~--~i~i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl  315 (377)
                      +...|  | .  .+.++.+.|. ..+.+|..         +.+.|.+++.+..  +.+.-++.|+||||+|++|++++.|
T Consensus       319 ~~~~d~~g~~~~~~~itR~efe~l~~~l~~~---------~~~~i~~~L~~a~--~~~~~i~~ViLvGGssriP~v~~~l  387 (663)
T PTZ00400        319 FITADQSGPKHLQIKLSRAKLEELTHDLLKK---------TIEPCEKCIKDAG--VKKDELNDVILVGGMTRMPKVSETV  387 (663)
T ss_pred             eeccCCCCceEEEEEECHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CCHHHCcEEEEECCccCChHHHHHH
Confidence            11111  1 1  2233333332 22223322         4455556665543  2234468899999999999999998


Q ss_pred             HHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          316 SKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       316 ~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ++.+..        .+....+|+.++-.||+++|..
T Consensus       388 ~~~f~~--------~~~~~~npdeaVA~GAAi~aa~  415 (663)
T PTZ00400        388 KKIFGK--------EPSKGVNPDEAVAMGAAIQAGV  415 (663)
T ss_pred             HHHhCC--------CcccCCCCccceeeccHHHHHh
Confidence            877632        1223457889999999999864

>PRK01433 hscA chaperone protein HscA; Provisional

Probab=99.81  E-value=4.1e-19  Score=177.27  Aligned_cols=206  Identities=17%  Similarity=0.196  Sum_probs=140.0

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEee--CCee-cC
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LP  174 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~--~g~~-l~  174 (377)
                      ..+|+++|..++..+|+.+.+.+ +..|++.+.++++|.||++++|.     .+.+|+|+|+++++|+.+.  +|.. +.
T Consensus       142 ~~aVITVPa~f~~~qR~a~~~Aa-~~AGl~v~~li~EPtAAAlay~~~~~~~~~vlV~DlGGGT~DvSi~~~~~~~~~V~  220 (595)
T PRK01433        142 TKAVITVPAHFNDAARGEVMLAA-KIAGFEVLRLIAEPTAAAYAYGLNKNQKGCYLVYDLGGGTFDVSILNIQEGIFQVI  220 (595)
T ss_pred             ceEEEEECCCCCHHHHHHHHHHH-HHcCCCEEEEecCcHHHHHHHhcccCCCCEEEEEECCCCcEEEEEEEEeCCeEEEE
Confidence            57999999999999999988877 88999999999999999999874     4579999999999998764  4422 22


Q ss_pred             CceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCC
Q 017102          175 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGA  254 (377)
Q Consensus       175 ~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~  254 (377)
                      .+.....+||.+++..|.+++..+............++..|+.++.-.                  .+..   ..+.++.
T Consensus       221 at~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~ekaK~~LS~~~------------------~~~~---~~~~itr  279 (595)
T PRK01433        221 ATNGDNMLGGNDIDVVITQYLCNKFDLPNSIDTLQLAKKAKETLTYKD------------------SFNN---DNISINK  279 (595)
T ss_pred             EEcCCcccChHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCc------------------cccc---ceEEEcH
Confidence            222345799999999999988754211111112234555565543210                  0111   1344444


Q ss_pred             cccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEEC
Q 017102          255 ERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA  333 (377)
Q Consensus       255 ~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~  333 (377)
                      +.|. ..+.+|..         +.+.|.+++....    ..-++.|+||||+|++|.+++.|.+.+..        .+..
T Consensus       280 ~efe~l~~~l~~~---------~~~~i~~~L~~a~----~~~Id~ViLvGGssriP~v~~~l~~~f~~--------~~~~  338 (595)
T PRK01433        280 QTLEQLILPLVER---------TINIAQECLEQAG----NPNIDGVILVGGATRIPLIKDELYKAFKV--------DILS  338 (595)
T ss_pred             HHHHHHHHHHHHH---------HHHHHHHHHhhcC----cccCcEEEEECCcccChhHHHHHHHHhCC--------Ccee
Confidence            4432 22333322         4445555555443    23358899999999999999888877631        2334


Q ss_pred             CCCCccccchhhHHhhcc
Q 017102          334 PPERKYSVWIGGSILASL  351 (377)
Q Consensus       334 ~~~~~~~~w~Gasi~a~l  351 (377)
                      +.+|..++-.||+++|..
T Consensus       339 ~~npdeaVA~GAAi~a~~  356 (595)
T PRK01433        339 DIDPDKAVVWGAALQAEN  356 (595)
T ss_pred             cCCchHHHHHHHHHHHHH
Confidence            567899999999999875

>PLN03184 chloroplast Hsp70; Provisional

Probab=99.81  E-value=2.7e-19  Score=181.38  Aligned_cols=297  Identities=18%  Similarity=0.213  Sum_probs=179.5

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeeccc
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI   73 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~   73 (377)
                      .+|.||+||+++++++..+..|.        ..+||+++...         +...++|+.|...      +..+.+++.+
T Consensus        40 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~---------~~~~~vG~~A~~~~~~~p~~ti~~~Krli  110 (673)
T PLN03184         40 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTK---------NGDRLVGQIAKRQAVVNPENTFFSVKRFI  110 (673)
T ss_pred             CEEEEEeCcCcEEEEEEECCeEEEEECCCCCeecceEEEEcC---------CCCEEECHHHHHhhhhCchhhhHHHHHhh
Confidence            57999999999999998666554        23455554422         1235566665432      0111111111


Q ss_pred             c-------------------------------CC-ccCCHHHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHH
Q 017102           74 E-------------------------------HG-IVSNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR  118 (377)
Q Consensus        74 ~-------------------------------~g-~i~~~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~  118 (377)
                      .                               .| .+...+....+++++..   ..++.  .-..+||++|..++..+|
T Consensus       111 G~~~~d~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~speei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qR  188 (673)
T PLN03184        111 GRKMSEVDEESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLND--KVTKAVITVPAYFNDSQR  188 (673)
T ss_pred             CCCcchhhhhhhcCCeEEEecCCCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHH
Confidence            1                               11 12223344555555532   22332  235799999999999999


Q ss_pred             HHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCC--ee-cCCceEEEcccHHHHHHH
Q 017102          119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEG--YA-LPHAILRLDLAGRDLTDA  190 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g--~~-l~~~~~~~~~GG~~l~~~  190 (377)
                      +.+.+.+ +..|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+.-+  .. +..+....++||.++++.
T Consensus       189 ~a~~~Aa-~~AGl~v~~li~EPtAAAlayg~~~~~~~~vlV~DlGgGT~DvSi~~~~~~~~eVla~~gd~~LGG~dfD~~  267 (673)
T PLN03184        189 TATKDAG-RIAGLEVLRIINEPTAASLAYGFEKKSNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKR  267 (673)
T ss_pred             HHHHHHH-HHCCCCeEEEeCcHHHHHHHhhcccCCCCEEEEEECCCCeEEEEEEEecCCEEEEEEecCCCccCHHHHHHH
Confidence            9988777 88999999999999999998874     468999999999999876433  21 122223468999999999


Q ss_pred             HHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC------CC-ceEe--
Q 017102          191 LMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG-QVIT--  251 (377)
Q Consensus       191 l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------d~-~~i~--  251 (377)
                      |.+++.++     +.+......     ...++..|+.++...                ...+.++      ++ ..+.  
T Consensus       268 L~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~----------------~~~i~i~~~~~~~~g~~~~~~~  331 (673)
T PLN03184        268 IVDWLASNFKKDEGIDLLKDKQALQRLTEAAEKAKIELSSLT----------------QTSISLPFITATADGPKHIDTT  331 (673)
T ss_pred             HHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHHHhcCCCC----------------cceEEEEeeeccCCCCceEEEE
Confidence            99887543     111111100     223445555544211                1111111      11 2233  


Q ss_pred             eCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEE
Q 017102          252 IGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIK  330 (377)
Q Consensus       252 i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~  330 (377)
                      +..+.|. ..+.++..         +.+.|.+++.....+  ..-++.|+||||+|++|.++++|++.+..        .
T Consensus       332 itR~~fe~l~~~l~~r---------~~~~i~~~L~~a~~~--~~dId~ViLvGGssriP~V~~~i~~~fg~--------~  392 (673)
T PLN03184        332 LTRAKFEELCSDLLDR---------CKTPVENALRDAKLS--FKDIDEVILVGGSTRIPAVQELVKKLTGK--------D  392 (673)
T ss_pred             ECHHHHHHHHHHHHHH---------HHHHHHHHHHHcCCC--hhHccEEEEECCccccHHHHHHHHHHhCC--------C
Confidence            3333332 22222222         444555555544322  23458899999999999999999877732        1


Q ss_pred             EECCCCCccccchhhHHhhcc
Q 017102          331 VVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       331 v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +....+|+.++-.||+++|..
T Consensus       393 ~~~~~npdeaVA~GAAi~aa~  413 (673)
T PLN03184        393 PNVTVNPDEVVALGAAVQAGV  413 (673)
T ss_pred             cccccCcchHHHHHHHHHHHH
Confidence            122346789999999999874

>PRK00290 dnaK molecular chaperone DnaK; Provisional

Probab=99.81  E-value=1.9e-19  Score=182.23  Aligned_cols=297  Identities=17%  Similarity=0.205  Sum_probs=178.7

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeeccc
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI   73 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~   73 (377)
                      .+|.||+||+++++++..+..|.        ..+||+++...         +...++|++|...      +..+.+++.+
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~---------~~~~~vG~~A~~~~~~~p~~~i~~~Kr~i   73 (627)
T PRK00290          3 KIIGIDLGTTNSCVAVMEGGEPKVIENAEGARTTPSVVAFTK---------DGERLVGQPAKRQAVTNPENTIFSIKRLM   73 (627)
T ss_pred             cEEEEEeCcccEEEEEEECCEEEEEECCCCCcccceEEEEeC---------CCCEEEcHHHHHhhhhCchhhHHHHHHHh
Confidence            57999999999999998655443        34566665432         2245677665432      0111122222


Q ss_pred             cC-----------------------------CccCCH-HHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHHHH
Q 017102           74 EH-----------------------------GIVSNW-DDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANREK  120 (377)
Q Consensus        74 ~~-----------------------------g~i~~~-~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~~~  120 (377)
                      ..                             |..... +....+++++.   ...++.  .-..+|+++|..++..+|+.
T Consensus        74 G~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~--~v~~~VItVPa~f~~~qR~a  151 (627)
T PRK00290         74 GRRDEEVQKDIKLVPYKIVKADNGDAWVEIDGKKYTPQEISAMILQKLKKDAEDYLGE--KVTEAVITVPAYFNDAQRQA  151 (627)
T ss_pred             CCCchHHHHHhhcCCeEEEEcCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCC--CCceEEEEECCCCCHHHHHH
Confidence            11                             111222 22334444432   122332  23579999999999999999


Q ss_pred             HHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCe--e-cCCceEEEcccHHHHHHHHH
Q 017102          121 MTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGY--A-LPHAILRLDLAGRDLTDALM  192 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~--~-l~~~~~~~~~GG~~l~~~l~  192 (377)
                      +.+.+ +..|++.+.++++|+||+++++.     .+.+|+|+|+++++|+.+.-+.  . +..+....++||.+++..|.
T Consensus       152 ~~~Aa-~~AGl~v~~li~EptAAAl~y~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~vla~~gd~~lGG~d~D~~l~  230 (627)
T PRK00290        152 TKDAG-KIAGLEVLRIINEPTAAALAYGLDKKGDEKILVYDLGGGTFDVSILEIGDGVFEVLSTNGDTHLGGDDFDQRII  230 (627)
T ss_pred             HHHHH-HHcCCceEEEecchHHHHHHhhhccCCCCEEEEEECCCCeEEEEEEEEeCCeEEEEEecCCCCcChHHHHHHHH
Confidence            88777 88999999999999999998864     5689999999999998764431  1 12222346899999999999


Q ss_pred             HHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEc----CC--C-ce--EeeC
Q 017102          193 KILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL----PD--G-QV--ITIG  253 (377)
Q Consensus       193 ~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~----pd--~-~~--i~i~  253 (377)
                      +++.++     +.++.....     ...++..|+.++.-                ....+.+    .|  | ..  +.++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~----------------~~~~i~i~~~~~d~~g~~~~~~~it  294 (627)
T PRK00290        231 DYLADEFKKENGIDLRKDKMALQRLKEAAEKAKIELSSA----------------QQTEINLPFITADASGPKHLEIKLT  294 (627)
T ss_pred             HHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCC----------------CeEEEEEeecccCCCCCeEEEEEEC
Confidence            887542     222211100     12344455544321                1111211    11  1 22  2333


Q ss_pred             Ccccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEE
Q 017102          254 AERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVV  332 (377)
Q Consensus       254 ~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~  332 (377)
                      .+.|. ..+.++..         +.+.|.+++.....  ...-++.|+||||+|++|.++++|++.+..        .+.
T Consensus       295 R~~fe~l~~~l~~~---------~~~~i~~~l~~a~~--~~~~id~ViLvGGssriP~v~~~l~~~fg~--------~~~  355 (627)
T PRK00290        295 RAKFEELTEDLVER---------TIEPCKQALKDAGL--SVSDIDEVILVGGSTRMPAVQELVKEFFGK--------EPN  355 (627)
T ss_pred             HHHHHHHHHHHHHH---------HHHHHHHHHHHcCC--ChhhCcEEEEECCcCCChHHHHHHHHHhCC--------CCC
Confidence            33332 22222222         44555555554432  233468899999999999999999887632        123


Q ss_pred             CCCCCccccchhhHHhhcc
Q 017102          333 APPERKYSVWIGGSILASL  351 (377)
Q Consensus       333 ~~~~~~~~~w~Gasi~a~l  351 (377)
                      ...+|+.++..||+++|..
T Consensus       356 ~~~npdeava~GAa~~aa~  374 (627)
T PRK00290        356 KGVNPDEVVAIGAAIQGGV  374 (627)
T ss_pred             cCcCChHHHHHhHHHHHHH
Confidence            3457889999999999864

>TIGR02350 prok_dnaK chaperone protein DnaK

Probab=99.80  E-value=2.7e-19  Score=180.40  Aligned_cols=296  Identities=17%  Similarity=0.220  Sum_probs=177.9

Q ss_pred             cEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeecccc
Q 017102            9 PLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPIE   74 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~~   74 (377)
                      +|.||+||+++++++..+..|.        ..+||+++...         +...++|+.|...      .....+++.+.
T Consensus         2 viGIDlGtt~s~va~~~~g~~~ii~n~~~~~~~PS~V~~~~---------~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG   72 (595)
T TIGR02350         2 IIGIDLGTTNSCVAVMEGGEPVVIPNAEGARTTPSVVAFTK---------NGERLVGQPAKRQAVTNPENTIYSIKRFMG   72 (595)
T ss_pred             EEEEEeCcccEEEEEEECCEEEEEECCCCCcccCeEEEEeC---------CCCEEECHHHHHhhhhCchhhhHHHHHHhC
Confidence            6899999999999998666554        24455554432         2245677766542      11112222221


Q ss_pred             C----------------------------CccCCH-HHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHHHHHH
Q 017102           75 H----------------------------GIVSNW-DDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANREKMT  122 (377)
Q Consensus        75 ~----------------------------g~i~~~-~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~  122 (377)
                      .                            |..... +....+++++.   ...++.  .-..+++++|..++..+|+.+.
T Consensus        73 ~~~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~peel~a~~L~~l~~~a~~~~~~--~v~~~VItVPa~f~~~qR~a~~  150 (595)
T TIGR02350        73 RRFDEVTEEAKRVPYKVVGDGGDVRVKVDGKEYTPQEISAMILQKLKKDAEAYLGE--KVTEAVITVPAYFNDAQRQATK  150 (595)
T ss_pred             CCchHHHHHhhcCCeeEEcCCCceEEEECCEEecHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHHH
Confidence            1                            111122 22334444432   122332  2256999999999999999988


Q ss_pred             hhhcccCCCCeEEeechhhhhhhhcCC------ceEEEEeCCCCceEEEEeeC--Cee-cCCceEEEcccHHHHHHHHHH
Q 017102          123 QIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYE--GYA-LPHAILRLDLAGRDLTDALMK  193 (377)
Q Consensus       123 ~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~pv~~--g~~-l~~~~~~~~~GG~~l~~~l~~  193 (377)
                      +.+ +..|++.+.++++|.||++++|.      .+.+|+|+|+++++|+.+.-  |.. +..+.....+||.++++.|.+
T Consensus       151 ~Aa-~~AGl~v~~li~EptAAAl~y~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~v~~~~gd~~lGG~d~D~~l~~  229 (595)
T TIGR02350       151 DAG-KIAGLEVLRIINEPTAAALAYGLDKSKKDEKILVFDLGGGTFDVSILEIGDGVFEVLSTAGDTHLGGDDFDQRIID  229 (595)
T ss_pred             HHH-HHcCCceEEEecchHHHHHHHhhcccCCCcEEEEEECCCCeEEEEEEEecCCeEEEEEecCCcccCchhHHHHHHH
Confidence            877 88999999999999999998763      46899999999999987643  322 122223458999999999998


Q ss_pred             HHHhc-----CCCccChh-H----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC----C--C-ce--EeeCC
Q 017102          194 ILTER-----GYSFTTTA-E----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP----D--G-QV--ITIGA  254 (377)
Q Consensus       194 ~l~~~-----~~~~~~~~-~----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p----d--~-~~--i~i~~  254 (377)
                      ++.++     +.++.... .    ...++..|..++..                ....+.+|    |  | ..  +.++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~----------------~~~~i~i~~~~~~~~g~~~~~~~itr  293 (595)
T TIGR02350       230 WLADEFKKEEGIDLSKDKMALQRLKEAAEKAKIELSSV----------------LSTEINLPFITADASGPKHLEMTLTR  293 (595)
T ss_pred             HHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCC----------------CceEEEeeecccCCCCCeeEEEEEeH
Confidence            87532     22221110 0    12345555554421                11111111    1  1 22  23333


Q ss_pred             cccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEEC
Q 017102          255 ERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA  333 (377)
Q Consensus       255 ~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~  333 (377)
                      +.|. ..+.++..         +.+.|.+++.+..  +...-++.|+|+||+|++|.+++.+++.+..        .+..
T Consensus       294 ~~fe~l~~~l~~~---------~~~~i~~~l~~a~--~~~~~i~~V~LvGGssriP~v~~~i~~~f~~--------~~~~  354 (595)
T TIGR02350       294 AKFEELTADLVER---------TKEPVRQALKDAG--LSASDIDEVILVGGSTRIPAVQELVKDFFGK--------EPNK  354 (595)
T ss_pred             HHHHHHHHHHHHH---------HHHHHHHHHHHcC--CCHhHCcEEEEECCcccChHHHHHHHHHhCC--------cccC
Confidence            3332 22222222         4445555555442  2234468899999999999999998876632        2334


Q ss_pred             CCCCccccchhhHHhhcc
Q 017102          334 PPERKYSVWIGGSILASL  351 (377)
Q Consensus       334 ~~~~~~~~w~Gasi~a~l  351 (377)
                      ..+|+.++..||+++|..
T Consensus       355 ~~~pdeava~GAa~~aa~  372 (595)
T TIGR02350       355 SVNPDEVVAIGAAIQGGV  372 (595)
T ss_pred             CcCcHHHHHHHHHHHHHH
Confidence            567889999999999864

Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.

>PTZ00186 heat shock 70 kDa precursor protein; Provisional

Probab=99.80  E-value=5.3e-19  Score=177.97  Aligned_cols=217  Identities=18%  Similarity=0.195  Sum_probs=140.3

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEee--CCee-cC
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LP  174 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~--~g~~-l~  174 (377)
                      ..+||++|.+++..+|+.+.+.+ +.+|++.+.++++|+||++++|.     .+.+|+|+|+++++|+.+.  +|.. +.
T Consensus       161 ~~aVITVPayF~~~qR~at~~Aa-~~AGl~v~rlInEPtAAAlayg~~~~~~~~vlV~DlGGGT~DvSil~~~~g~~~V~  239 (657)
T PTZ00186        161 SNAVVTCPAYFNDAQRQATKDAG-TIAGLNVIRVVNEPTAAALAYGMDKTKDSLIAVYDLGGGTFDISVLEIAGGVFEVK  239 (657)
T ss_pred             ceEEEEECCCCChHHHHHHHHHH-HHcCCCeEEEEcChHHHHHHHhccCCCCCEEEEEECCCCeEEEEEEEEeCCEEEEE
Confidence            57999999999999999988777 88999999999999999999874     4689999999999998775  5643 22


Q ss_pred             CceEEEcccHHHHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEc
Q 017102          175 HAILRLDLAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL  244 (377)
Q Consensus       175 ~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  244 (377)
                      .+....++||.++++.|.+++.++     +.+......     ...+++.|..++....            ......+..
T Consensus       240 at~Gd~~LGG~DfD~~l~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~------------~~i~i~~i~  307 (657)
T PTZ00186        240 ATNGDTHLGGEDFDLALSDYILEEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAME------------TEVNLPFIT  307 (657)
T ss_pred             EecCCCCCCchhHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCc------------eEEEEeeec
Confidence            223356899999999999877542     222211000     1235555555543110            000111111


Q ss_pred             C--CC---ceEeeCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHH
Q 017102          245 P--DG---QVITIGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKE  318 (377)
Q Consensus       245 p--d~---~~i~i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~e  318 (377)
                      .  +|   ..+.++.+.|. ..+.|+..         +.+.+.+++....  +...-++.|+||||+|+||.+++.+.+.
T Consensus       308 ~~~~g~~~~~~~ItR~efe~l~~~l~~r---------~~~~v~~~L~~a~--~~~~dId~VvLVGGssriP~V~~~l~~~  376 (657)
T PTZ00186        308 ANADGAQHIQMHISRSKFEGITQRLIER---------SIAPCKQCMKDAG--VELKEINDVVLVGGMTRMPKVVEEVKKF  376 (657)
T ss_pred             cCCCCCcceEEEecHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CChhhCCEEEEECCcccChHHHHHHHHH
Confidence            1  11   12333433332 22223322         3444445554432  2234567899999999999999999877


Q ss_pred             HhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          319 ISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       319 l~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +...        .....+|+.++..||+++|..
T Consensus       377 fg~~--------~~~~~nPdeaVA~GAAi~a~~  401 (657)
T PTZ00186        377 FQKD--------PFRGVNPDEAVALGAATLGGV  401 (657)
T ss_pred             hCCC--------ccccCCCchHHHHhHHHHHHH
Confidence            6421        123457789999999999874

>PRK05183 hscA chaperone protein HscA; Provisional

Probab=99.79  E-value=5.8e-19  Score=177.54  Aligned_cols=296  Identities=20%  Similarity=0.169  Sum_probs=176.0

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeec-
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKY-   71 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~-   71 (377)
                      ..+|.||+||+++.+++..+..|.        ..+||+++...          ....+|.+|...      +....+++ 
T Consensus        19 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~f~~----------~~~~vG~~A~~~~~~~p~~ti~~~Krl   88 (616)
T PRK05183         19 RLAVGIDLGTTNSLVATVRSGQAEVLPDEQGRVLLPSVVRYLE----------DGIEVGYEARANAAQDPKNTISSVKRF   88 (616)
T ss_pred             CeEEEEEeccccEEEEEEECCEEEEEEcCCCCeecCeEEEEcC----------CCEEEcHHHHHhhHhCchhhHHHHHHH
Confidence            357999999999999998655554        23555554422          235677665432      00011111 


Q ss_pred             ---------------cc--------------cCCccCCHHHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHHH
Q 017102           72 ---------------PI--------------EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANRE  119 (377)
Q Consensus        72 ---------------p~--------------~~g~i~~~~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~~  119 (377)
                                     |+              ..+.+.-.+....+++++..   ..++.  .-..+|+++|..++..+|+
T Consensus        89 iG~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qR~  166 (616)
T PRK05183         89 MGRSLADIQQRYPHLPYQFVASENGMPLIRTAQGLKSPVEVSAEILKALRQRAEETLGG--ELDGAVITVPAYFDDAQRQ  166 (616)
T ss_pred             hCCCchhhhhhhhcCCeEEEecCCCceEEEecCCeEcHHHHHHHHHHHHHHHHHHHhCC--CcceEEEEECCCCCHHHHH
Confidence                           11              11222222333445544431   22332  2357999999999999999


Q ss_pred             HHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEee--CCee-cCCceEEEcccHHHHHHHH
Q 017102          120 KMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDAL  191 (377)
Q Consensus       120 ~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~~GG~~l~~~l  191 (377)
                      .+.+.+ +.+|++.+.++++|.||+++++.     .+.+|+|+|+++++|+.+.  .|.. +..+.....+||.++++.|
T Consensus       167 a~~~Aa-~~AGl~v~~li~EPtAAAlay~~~~~~~~~vlV~DlGGGT~DvSv~~~~~~~~evlat~gd~~lGG~d~D~~l  245 (616)
T PRK05183        167 ATKDAA-RLAGLNVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDSALGGDDFDHLL  245 (616)
T ss_pred             HHHHHH-HHcCCCeEEEecchHHHHHHhhcccCCCCEEEEEECCCCeEEEEEEEeeCCEEEEEEecCCCCcCHHHHHHHH
Confidence            987776 89999999999999999988764     4579999999999998774  3322 1222334689999999999


Q ss_pred             HHHHHhc-CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCcccc-ccccCC
Q 017102          192 MKILTER-GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFR-CPEVLF  264 (377)
Q Consensus       192 ~~~l~~~-~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~-~~e~lf  264 (377)
                      .+++.++ +........     ...++..|+.++.                .....+.+++-. -.++.+.|. ..+.++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~----------------~~~~~i~i~~~~-~~itr~efe~l~~~l~  308 (616)
T PRK05183        246 ADWILEQAGLSPRLDPEDQRLLLDAARAAKEALSD----------------ADSVEVSVALWQ-GEITREQFNALIAPLV  308 (616)
T ss_pred             HHHHHHHcCCCcCCCHHHHHHHHHHHHHHHHhcCC----------------CceEEEEEecCC-CeEcHHHHHHHHHHHH
Confidence            9988654 222211100     1223444444331                111222222210 012222221 112222


Q ss_pred             CCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchh
Q 017102          265 QPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIG  344 (377)
Q Consensus       265 ~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~G  344 (377)
                      ..         +.+.|.+++.+..  +...-++.|+||||+|++|.+++.|.+.+...        +..+.+|+.++-.|
T Consensus       309 ~~---------~~~~i~~~L~~a~--~~~~~i~~ViLvGGssriP~v~~~l~~~fg~~--------~~~~~npdeaVA~G  369 (616)
T PRK05183        309 KR---------TLLACRRALRDAG--VEADEVKEVVMVGGSTRVPLVREAVGEFFGRT--------PLTSIDPDKVVAIG  369 (616)
T ss_pred             HH---------HHHHHHHHHHHcC--CCcccCCEEEEECCcccChHHHHHHHHHhccC--------cCcCCCchHHHHHH
Confidence            21         3444445554432  22334578999999999999999988766421        22345788999999


Q ss_pred             hHHhhcc
Q 017102          345 GSILASL  351 (377)
Q Consensus       345 asi~a~l  351 (377)
                      |+++|..
T Consensus       370 AAi~a~~  376 (616)
T PRK05183        370 AAIQADI  376 (616)
T ss_pred             HHHHHHH
Confidence            9999874

>PRK13410 molecular chaperone DnaK; Provisional

Probab=99.79  E-value=6.4e-19  Score=178.09  Aligned_cols=297  Identities=18%  Similarity=0.198  Sum_probs=176.7

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeeccc
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI   73 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~   73 (377)
                      .+|.||+||+++++++..+..|.        ..+||+++...+         ...++|..|...      .....+++.+
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~---------~~~~vG~~A~~~~~~~p~~ti~~~KRli   73 (668)
T PRK13410          3 RIVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFTKD---------GELLVGQLARRQLVLNPQNTFYNLKRFI   73 (668)
T ss_pred             cEEEEEeCCCcEEEEEEECCeEEEEECCCCCccCceEEEEeCC---------CCEEECHHHHHhhHhCccceehHHhhhh
Confidence            57999999999999998655554        345666655322         235677665432      1111222222


Q ss_pred             cC---------------------C----------ccCCH-HHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHH
Q 017102           74 EH---------------------G----------IVSNW-DDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANR  118 (377)
Q Consensus        74 ~~---------------------g----------~i~~~-~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~  118 (377)
                      ..                     |          ..... +....+++++.   ...++.  .-..+||++|..++..+|
T Consensus        74 G~~~~~~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~speel~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qR  151 (668)
T PRK13410         74 GRRYDELDPESKRVPYTIRRNEQGNVRIKCPRLEREFAPEELSAMILRKLADDASRYLGE--PVTGAVITVPAYFNDSQR  151 (668)
T ss_pred             CCCchhhHHhhccCCeEEEECCCCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCC--CcceEEEEECCCCCHHHH
Confidence            11                     1          11111 22233444332   123332  224699999999999999


Q ss_pred             HHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEee--CCee-cCCceEEEcccHHHHHHH
Q 017102          119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDA  190 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~~GG~~l~~~  190 (377)
                      +.+.+.+ +..|++.+.++++|.||++++|.     .+.+|+|+|+++++|+.+.  +|.. +..+.....+||.++++.
T Consensus       152 ~a~~~Aa-~~AGl~v~~li~EPtAAAlayg~~~~~~~~vlV~DlGgGT~Dvsv~~~~~g~~~V~at~gd~~lGG~dfD~~  230 (668)
T PRK13410        152 QATRDAG-RIAGLEVERILNEPTAAALAYGLDRSSSQTVLVFDLGGGTFDVSLLEVGNGVFEVKATSGDTQLGGNDFDKR  230 (668)
T ss_pred             HHHHHHH-HHcCCCeEEEecchHHHHHHhccccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEeecCCCCChhHHHHH
Confidence            9888777 88999999999999999999874     4689999999999998764  3322 222233458999999999


Q ss_pred             HHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC----C--C-ceE--e
Q 017102          191 LMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP----D--G-QVI--T  251 (377)
Q Consensus       191 l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p----d--~-~~i--~  251 (377)
                      |.+++.++     +.++.....     ...++.+|..++..                ....+.+|    +  + ..+  .
T Consensus       231 l~~~l~~~f~~~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~----------------~~~~i~i~~~~~~~~g~~~~~~~  294 (668)
T PRK13410        231 IVDWLAEQFLEKEGIDLRRDRQALQRLTEAAEKAKIELSGV----------------SVTDISLPFITATEDGPKHIETR  294 (668)
T ss_pred             HHHHHHHHHHhhhCCCcccCHHHHHHHHHHHHHHHHhcCCC----------------CceEEEEeeeecCCCCCeeEEEE
Confidence            98877543     222211100     12344455544321                11122221    1  1 122  2


Q ss_pred             eCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEE
Q 017102          252 IGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIK  330 (377)
Q Consensus       252 i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~  330 (377)
                      +....|. ..+.++..         +.+.|.+++....  +.+.-++.|+||||+|++|.+++.+++.+..        .
T Consensus       295 itR~~FE~l~~~l~~r---------~~~~i~~~L~~ag--~~~~dId~VvLVGGssRiP~V~~~l~~~fg~--------~  355 (668)
T PRK13410        295 LDRKQFESLCGDLLDR---------LLRPVKRALKDAG--LSPEDIDEVVLVGGSTRMPMVQQLVRTLIPR--------E  355 (668)
T ss_pred             ECHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CChhhCcEEEEECCccccHHHHHHHHHHcCC--------C
Confidence            3333221 22222222         4444455554332  2334567899999999999988888765532        1


Q ss_pred             EECCCCCccccchhhHHhhcc
Q 017102          331 VVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       331 v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +....+|+.++-.||+++|..
T Consensus       356 ~~~~~npdeaVA~GAAi~aa~  376 (668)
T PRK13410        356 PNQNVNPDEVVAVGAAIQAGI  376 (668)
T ss_pred             cccCCCCchHHHHhHHHHHHh
Confidence            223456789999999999875

>PRK13411 molecular chaperone DnaK; Provisional

Probab=99.79  E-value=5.8e-19  Score=178.70  Aligned_cols=302  Identities=17%  Similarity=0.210  Sum_probs=177.3

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeeccc
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI   73 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~   73 (377)
                      .+|.||+||+++++++..+..|.        ..+||+++...         ....+||..|...      +..+.+++.+
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~---------~~~~~vG~~A~~~~~~~p~~ti~~~Krli   73 (653)
T PRK13411          3 KVIGIDLGTTNSCVAVLEGGKPIVIPNSEGGRTTPSIVGFGK---------SGDRLVGQLAKRQAVTNAENTVYSIKRFI   73 (653)
T ss_pred             cEEEEEeCcccEEEEEEECCEEEEEECCCCCccCceEEEEeC---------CCCEEEcHHHHHhhhhCcccchHHHHHHh
Confidence            58999999999999997665554        23566665432         1235677665432      1111222222


Q ss_pred             cC---------------------C--------ccCCH-HHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHHHH
Q 017102           74 EH---------------------G--------IVSNW-DDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANREK  120 (377)
Q Consensus        74 ~~---------------------g--------~i~~~-~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~~~  120 (377)
                      ..                     |        ..... +....+++++.   ...++.  .-..+||++|..++..+|+.
T Consensus        74 G~~~~d~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~peei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qR~a  151 (653)
T PRK13411         74 GRRWDDTEEERSRVPYTCVKGRDDTVNVQIRGRNYTPQEISAMILQKLKQDAEAYLGE--PVTQAVITVPAYFTDAQRQA  151 (653)
T ss_pred             CCCccchhHHhhcCCceEEecCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCC--CcceEEEEECCCCCcHHHHH
Confidence            11                     1        11122 22233343332   123332  23579999999999999999


Q ss_pred             HHhhhcccCCCCeEEeechhhhhhhhcCC------ceEEEEeCCCCceEEEEee--CCee-cCCceEEEcccHHHHHHHH
Q 017102          121 MTQIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDAL  191 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~~GG~~l~~~l  191 (377)
                      +.+.+ +..|++.+.++++|.||++++|.      .+-+|+|+|+++++|+.+.  +|.. +..+.....+||.++++.|
T Consensus       152 ~~~Aa-~~AGl~v~~li~EPtAAAl~y~~~~~~~~~~vlV~DlGgGT~dvsi~~~~~~~~~V~at~gd~~LGG~dfD~~l  230 (653)
T PRK13411        152 TKDAG-TIAGLEVLRIINEPTAAALAYGLDKQDQEQLILVFDLGGGTFDVSILQLGDGVFEVKATAGNNHLGGDDFDNCI  230 (653)
T ss_pred             HHHHH-HHcCCCeEEEecchHHHHHHhcccccCCCCEEEEEEcCCCeEEEEEEEEeCCEEEEEEEecCCCcCHHHHHHHH
Confidence            88877 88999999999999999998874      3579999999999998663  2322 2222234589999999999


Q ss_pred             HHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC---CceE--eeCCcc
Q 017102          192 MKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD---GQVI--TIGAER  256 (377)
Q Consensus       192 ~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd---~~~i--~i~~~~  256 (377)
                      .+++.++     +.++.....     ...+++.|+.++.-.            .......+...|   +..+  .++.+.
T Consensus       231 ~~~l~~~f~~~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~------------~~~i~i~~~~~d~~~~~~~~~~itR~~  298 (653)
T PRK13411        231 VDWLVENFQQQEGIDLSQDKMALQRLREAAEKAKIELSSML------------TTSINLPFITADETGPKHLEMELTRAK  298 (653)
T ss_pred             HHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHhcCCCC------------ceEEEEeeeccCCCCCeeEEEEEcHHH
Confidence            8887543     222211100     123444444443210            000011111111   1222  333333


Q ss_pred             cc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCC
Q 017102          257 FR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP  335 (377)
Q Consensus       257 ~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~  335 (377)
                      |. ..+.++..         +.+.|.+++.+..  +...-++.|+||||+|++|.+++.|++.+...       .+....
T Consensus       299 fe~l~~~l~~~---------~~~~i~~~L~~a~--~~~~~id~ViLvGGssriP~v~~~l~~~f~~~-------~~~~~~  360 (653)
T PRK13411        299 FEELTKDLVEA---------TIEPMQQALKDAG--LKPEDIDRVILVGGSTRIPAVQEAIQKFFGGK-------QPDRSV  360 (653)
T ss_pred             HHHHHHHHHHH---------HHHHHHHHHHHcC--CCHHHCcEEEEECCCCCcchHHHHHHHHcCCc-------CcCCCC
Confidence            32 22222222         4445555555442  33445688999999999999999998776321       122345


Q ss_pred             CCccccchhhHHhhcc
Q 017102          336 ERKYSVWIGGSILASL  351 (377)
Q Consensus       336 ~~~~~~w~Gasi~a~l  351 (377)
                      +|+.++-.||+++|..
T Consensus       361 npdeaVA~GAAi~aa~  376 (653)
T PRK13411        361 NPDEAVALGAAIQAGV  376 (653)
T ss_pred             CchHHHHHHHHHHHHh
Confidence            7789999999999864

>PTZ00009 heat shock 70 kDa protein; Provisional

Probab=99.78  E-value=3.8e-18  Score=172.94  Aligned_cols=214  Identities=15%  Similarity=0.203  Sum_probs=139.9

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-------ceEEEEeCCCCceEEEEee--CCee-
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA-  172 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~v~pv~--~g~~-  172 (377)
                      ..+||++|.+++..+|+.+.+.+ +.+|++.+.++++|+||+++++.       .+.+|+|+|+++++|+.+.  +|.. 
T Consensus       141 ~~~VItVPa~f~~~qR~a~~~Aa-~~AGl~v~~li~EptAAAl~y~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~  219 (653)
T PTZ00009        141 KDAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLTIEDGIFE  219 (653)
T ss_pred             ceeEEEeCCCCCHHHHHHHHHHH-HHcCCceeEEecchHHHHHHHhhhccCCCCCEEEEEECCCCeEEEEEEEEeCCeEE
Confidence            57999999999999999988877 88999999999999999998863       4689999999999998764  4432 


Q ss_pred             cCCceEEEcccHHHHHHHHHHHHHhcC------CCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccce
Q 017102          173 LPHAILRLDLAGRDLTDALMKILTERG------YSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKS  241 (377)
Q Consensus       173 l~~~~~~~~~GG~~l~~~l~~~l~~~~------~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~  241 (377)
                      +..+.....+||.+++..|.+++.++.      .++.....     ...++.+|+.++..                ....
T Consensus       220 v~a~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~----------------~~~~  283 (653)
T PTZ00009        220 VKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSS----------------TQAT  283 (653)
T ss_pred             EEEecCCCCCChHHHHHHHHHHHHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHhCCCC----------------ceEE
Confidence            112222458999999999998875421      11111000     12344455444321                1122


Q ss_pred             EEc---CCCceEe--eCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHH
Q 017102          242 YEL---PDGQVIT--IGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM  315 (377)
Q Consensus       242 ~~~---pd~~~i~--i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl  315 (377)
                      +.+   -++..+.  ++.+.|. ..+.+|..         +.+.|.++|.....+  ..-++.|+|+||+|++|.+++.|
T Consensus       284 i~i~~~~~~~d~~~~itR~~fe~l~~~l~~~---------~~~~i~~~L~~a~~~--~~~i~~ViLvGGssriP~v~~~i  352 (653)
T PTZ00009        284 IEIDSLFEGIDYNVTISRARFEELCGDYFRN---------TLQPVEKVLKDAGMD--KRSVHEVVLVGGSTRIPKVQSLI  352 (653)
T ss_pred             EEEEeccCCceEEEEECHHHHHHHHHHHHHH---------HHHHHHHHHHHcCCC--HHHCcEEEEECCCCCChhHHHHH
Confidence            222   2333333  3333332 22233322         445566666655432  23457899999999999999998


Q ss_pred             HHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          316 SKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       316 ~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ++.+...       .+....+|+.++-.||+++|..
T Consensus       353 ~~~f~~~-------~~~~~~npdeaVA~GAa~~aa~  381 (653)
T PTZ00009        353 KDFFNGK-------EPCKSINPDEAVAYGAAVQAAI  381 (653)
T ss_pred             HHHhCCC-------CCCCCCCcchHHhhhhhhhHHH
Confidence            8766321       1223457789999999999764

>PRK11678 putative chaperone; Provisional

Probab=99.69  E-value=3e-16  Score=151.57  Aligned_cols=180  Identities=18%  Similarity=0.205  Sum_probs=112.2

Q ss_pred             cEEEeCCCCceEEeeeCCCCC--------CCCCCceEEeeCCCCc-------------------------------cccC
Q 017102            9 PLVCDNGTGMVKAGFAGDDAP--------RAVFPSIVGRPRHTGV-------------------------------MVGM   49 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P--------~~~~ps~~~~~~~~~~-------------------------------~~~~   49 (377)
                      .+.||+||+++-+++..+..|        ...+||.++.......                               ....
T Consensus         2 ~iGID~GTtNs~va~~~~~~~~li~~~~~~~~~pS~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (450)
T PRK11678          2 FIGFDYGTANCSVAVMRDGKPRLLPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDERQALLRRAIRYNREEDIDV   81 (450)
T ss_pred             eEEEecCccceeeEEeeCCceEEEEcCCCCCcCCeeeeccCchhhhhhhhhhcccCcccchhhhhhhhhhhhcccccccc
Confidence            489999999999999965433        3466777755321000                               0011


Q ss_pred             CCccceeccchhccc----C----cceeeccc-----cCCccCCHHH-HHHHHHHhc---ccccccCCCCCcEEEEeCCC
Q 017102           50 GQKDAYVGDEAQSKR----G----ILTLKYPI-----EHGIVSNWDD-MEKIWHHTF---YNELRVAPEEHPILLTEAPL  112 (377)
Q Consensus        50 ~~~~~~vg~~~~~~~----~----~~~~~~p~-----~~g~i~~~~~-~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~  112 (377)
                      ......+|.+|.+..    +    ...+++-+     ..+.+...+. +..+|.++-   ...++  ..-..+||+.|..
T Consensus        82 ~~~~~~~G~~A~~~~~~~p~~~r~i~s~Kr~lg~~~~~~~~~~~~e~l~a~iL~~lk~~ae~~~g--~~v~~~VItvPa~  159 (450)
T PRK11678         82 TAQSVFFGLAALAQYLEDPEEVYFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIKQQAEAQLQ--AAITQAVIGRPVN  159 (450)
T ss_pred             cccccchhHHHHHhhccCCCCceEEecchhhhccCCCCccceeCHHHHHHHHHHHHHHHHHHHhC--CCCCcEEEEECCc
Confidence            234567888876541    1    11234333     2222222332 234444442   11222  1235799999998


Q ss_pred             CC-----HHHHHH--HHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCC----------
Q 017102          113 NP-----KANREK--MTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEG----------  170 (377)
Q Consensus       113 ~~-----~~~~~~--l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g----------  170 (377)
                      +.     ..+|+.  .+.-+.+..|++.+.++++|+||+++++.     .+.+|+|+|+++++++.|.-+          
T Consensus       160 F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl~y~~~~~~~~~vlV~D~GGGT~D~Svv~~~~~~~~~~~r~  239 (450)
T PRK11678        160 FQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDFEATLTEEKRVLVVDIGGGTTDCSMLLMGPSWRGRADRS  239 (450)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHhccccCCCCeEEEEEeCCCeEEEEEEEecCcccccCCcc
Confidence            76     555543  24444488999999999999999999873     578999999999999877422          


Q ss_pred             -eecCCceEEEcccHHHHHHHHH
Q 017102          171 -YALPHAILRLDLAGRDLTDALM  192 (377)
Q Consensus       171 -~~l~~~~~~~~~GG~~l~~~l~  192 (377)
                       .++.++  -..+||+++|+.|.
T Consensus       240 ~~vla~~--G~~lGG~DfD~~L~  260 (450)
T PRK11678        240 ASLLGHS--GQRIGGNDLDIALA  260 (450)
T ss_pred             eeEEecC--CCCCChHHHHHHHH
Confidence             122222  13799999999996

>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins

Probab=99.67  E-value=2.9e-16  Score=159.42  Aligned_cols=215  Identities=20%  Similarity=0.268  Sum_probs=134.6

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC------ceEEEEeCCCCceEEEEee--CCee-c
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIY--EGYA-L  173 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~pv~--~g~~-l  173 (377)
                      ..+++++|..++..+|+.+.+.+ +..|++.+.++++|.||+++++.      .+-+|+|+|+++++|+.+.  +|.. +
T Consensus       136 ~~~vitVPa~~~~~qr~~~~~Aa-~~agl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~Gggt~dvs~~~~~~~~~~v  214 (602)
T PF00012_consen  136 TDVVITVPAYFTDEQRQALRDAA-ELAGLNVLRLINEPTAAALAYGLERSDKGKTVLVVDFGGGTFDVSVVEFSNGQFEV  214 (602)
T ss_dssp             EEEEEEE-TT--HHHHHHHHHHH-HHTT-EEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEEESSEEEEEEEEEETTEEEE
T ss_pred             ccceeeechhhhhhhhhcccccc-cccccccceeecccccccccccccccccccceeccccccceEeeeehhcccccccc
Confidence            46999999999999999988888 88999999999999999987763      4789999999999988764  4432 2


Q ss_pred             CCceEEEcccHHHHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEE
Q 017102          174 PHAILRLDLAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE  243 (377)
Q Consensus       174 ~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~  243 (377)
                      ........+||.++++.|.+++.++     +.+......     ...++.+|+.++..              ......+.
T Consensus       215 ~~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~d~~~~~~~~~~L~~~~e~~K~~Ls~~--------------~~~~~~~~  280 (602)
T PF00012_consen  215 LATAGDNNLGGRDFDEALAEYLLEKFKKKYKIDLRENPRAMARLLEAAEKAKEQLSSN--------------DNTEITIS  280 (602)
T ss_dssp             EEEEEETTCSHHHHHHHHHHHHHHHHHHHHSS-GTCSHHHHHHHHHHHHHHHHHTTTS--------------SSSEEEEE
T ss_pred             cccccccccccceecceeeccccccccccccccccccccccccccccccccccccccc--------------cccccccc
Confidence            2233456899999999999988642     222211100     12244444443321              01111221


Q ss_pred             ----cCCCceEeeCCccccc---cccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHH
Q 017102          244 ----LPDGQVITIGAERFRC---PEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS  316 (377)
Q Consensus       244 ----~pd~~~i~i~~~~~~~---~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~  316 (377)
                          .+++..+.+.-.|-.+   .+.++..         +.+.|.+++.....  ...-++.|+|+||+|++|-+.+.|+
T Consensus       281 ~~~~~~~~~~~~~~itr~~fe~l~~~~~~~---------~~~~i~~~l~~~~~--~~~~i~~V~lvGG~sr~p~v~~~l~  349 (602)
T PF00012_consen  281 IESLYDDGEDFSITITREEFEELCEPLLER---------IIEPIEKALKDAGL--KKEDIDSVLLVGGSSRIPYVQEALK  349 (602)
T ss_dssp             EEEEETTTEEEEEEEEHHHHHHHTHHHHHH---------THHHHHHHHHHTT----GGGESEEEEESGGGGSHHHHHHHH
T ss_pred             cccccccccccccccccceecccccccccc---------cccccccccccccc--cccccceeEEecCcccchhhhhhhh
Confidence                2224444433333222   2222222         55566666665432  2444578999999999998887777


Q ss_pred             HHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          317 KEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       317 ~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.+.    .    .+....+|..++..||+++|..
T Consensus       350 ~~f~----~----~~~~~~~p~~aVA~GAa~~a~~  376 (602)
T PF00012_consen  350 ELFG----K----KISKSVNPDEAVARGAALYAAI  376 (602)
T ss_dssp             HHTT----S----EEB-SS-TTTHHHHHHHHHHHH
T ss_pred             hccc----c----ccccccccccccccccccchhh
Confidence            6553    1    3344567889999999999864

Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....

>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.67  E-value=1.9e-15  Score=150.27  Aligned_cols=311  Identities=17%  Similarity=0.166  Sum_probs=178.6

Q ss_pred             CCCcEEEeCCCCceEEeeeCCC-CCCCCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeeccccCCc-
Q 017102            6 DIQPLVCDNGTGMVKAGFAGDD-APRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPIEHGI-   77 (377)
Q Consensus         6 ~~~~vvID~Gs~~~k~G~~~~~-~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~~~g~-   77 (377)
                      ...+|.||+||+++.+++.... .|. ++++..+....+...........++|..|.+.      ...+.+++.+..+. 
T Consensus         4 ~~~~iGIDlGTTNS~vA~~~~~~~~~-vi~n~~g~r~~PSvv~f~~~~~~~vG~~A~~q~~~~p~~t~~~~kr~~G~~~~   82 (579)
T COG0443           4 AKKAIGIDLGTTNSVVAVMRGGGLPK-VIENAEGERLTPSVVAFSKNGEVLVGQAAKRQAVDNPENTIFSIKRKIGRGSN   82 (579)
T ss_pred             CceEEEEEcCCCcEEEEEEeCCCCce-EecCCCCCcccceEEEECCCCCEEecHHHHHHhhhCCcceEEEEehhcCCCCC
Confidence            4568999999999999998766 454 33333333222222111122257888877653      22345566665331 


Q ss_pred             -----------cCCH-HHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhh
Q 017102           78 -----------VSNW-DDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL  142 (377)
Q Consensus        78 -----------i~~~-~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~  142 (377)
                                 .... +....++.++-   ...|+  ..-..+++++|.+++..+|..+.+.+ ...|++.+.++++|.|
T Consensus        83 ~~~~~~~~~~~~~~~eeisa~~L~~lk~~ae~~lg--~~v~~~VItVPayF~d~qR~at~~A~-~iaGl~vlrlinEPtA  159 (579)
T COG0443          83 GLKISVEVDGKKYTPEEISAMILTKLKEDAEAYLG--EKVTDAVITVPAYFNDAQRQATKDAA-RIAGLNVLRLINEPTA  159 (579)
T ss_pred             CCcceeeeCCeeeCHHHHHHHHHHHHHHHHHHhhC--CCcceEEEEeCCCCCHHHHHHHHHHH-HHcCCCeEEEecchHH
Confidence                       1112 22233333321   12222  23367999999999999998877776 8899999999999999


Q ss_pred             hhhhcCC-----ceEEEEeCCCCceEEEEeeC--Ce-ecCCceEEEcccHHHHHHHHHHHHHhcC-----CCccChhH--
Q 017102          143 SLYASGR-----TTGIVLDSGDGVSHTVPIYE--GY-ALPHAILRLDLAGRDLTDALMKILTERG-----YSFTTTAE--  207 (377)
Q Consensus       143 a~~~~g~-----~~~lVVDiG~~~t~v~pv~~--g~-~l~~~~~~~~~GG~~l~~~l~~~l~~~~-----~~~~~~~~--  207 (377)
                      |++++|.     .+-+|+|+|+++++++.|.=  |. .+........+||++++..|...+..+-     .++.....  
T Consensus       160 AAlayg~~~~~~~~vlV~DlGGGTfDvSll~~~~g~~ev~at~gd~~LGGddfD~~l~~~~~~~f~~~~~~d~~~~~~~~  239 (579)
T COG0443         160 AALAYGLDKGKEKTVLVYDLGGGTFDVSLLEIGDGVFEVLATGGDNHLGGDDFDNALIDYLVMEFKGKGGIDLRSDKAAL  239 (579)
T ss_pred             HHHHhHhccCCCcEEEEEEcCCCCEEEEEEEEcCCEEEEeecCCCcccCchhHHHHHHHHHHHHhhccCCccccccHHHH
Confidence            9999985     47899999999999997754  32 2233445679999999999998775431     22222111  


Q ss_pred             ---HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEee--CCccccccccCCCCCCCCCCCCChhHHHHH
Q 017102          208 ---REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAERFRCPEVLFQPSMIGMESAGIHETTYN  282 (377)
Q Consensus       208 ---~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i--~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~  282 (377)
                         ...++..|..++...              .....+..-++. +.+  .-.|..+ |-+..+.     ...+.+.+.+
T Consensus       240 ~rL~~~ae~aK~~LS~~~--------------~~~i~~~~~~~~-~~~~~~ltR~~~-E~l~~dl-----l~r~~~~~~~  298 (579)
T COG0443         240 QRLREAAEKAKIELSSAT--------------QTSINLPSIGGD-IDLLKELTRAKF-EELILDL-----LERTIEPVEQ  298 (579)
T ss_pred             HHHHHHHHHHHHHccccc--------------ccccchhhcccc-chhhhhhhHHHH-HHHHHHH-----HHHHHHHHHH
Confidence               123444444443221              111111111111 111  1112111 1111110     0001122222


Q ss_pred             HHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          283 SIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       283 ~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +++.  ..+...-++-|+++||.|+||=+.+.+.+.+.    .    ......+|+.++-.||++.|..
T Consensus       299 al~~--a~l~~~~I~~VilvGGstriP~V~~~v~~~f~----~----~~~~~inpdeava~GAa~qa~~  357 (579)
T COG0443         299 ALKD--AGLEKSDIDLVILVGGSTRIPAVQELVKEFFG----K----EPEKSINPDEAVALGAAIQAAV  357 (579)
T ss_pred             HHHH--cCCChhhCceEEEccceeccHHHHHHHHHHhC----c----cccccCCccHHHHHHHHHHHHh
Confidence            2222  22333555779999999999966666665554    1    2334457889999999998875

>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=99.51  E-value=9.7e-13  Score=119.65  Aligned_cols=220  Identities=18%  Similarity=0.219  Sum_probs=128.1

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC------ceEEEEeCCCCceEEE--EeeCCee-c
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTV--PIYEGYA-L  173 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~--pv~~g~~-l  173 (377)
                      ...|+++|.+++..+|+..- -+--..|.+.+.++++|.+|++++|.      .+-+|.|+|+++-+|+  -|-+|.- +
T Consensus       173 ~~AVvTvPAYFNDAQrQATK-DAGtIAgLnV~RIiNePTaAAIAYGLDKk~gEknilVfDLGGGTFDVSlLtIdnGVFeV  251 (663)
T KOG0100|consen  173 THAVVTVPAYFNDAQRQATK-DAGTIAGLNVVRIINEPTAAAIAYGLDKKDGEKNILVFDLGGGTFDVSLLTIDNGVFEV  251 (663)
T ss_pred             cceEEecchhcchHHHhhhc-ccceeccceEEEeecCccHHHHHhcccccCCcceEEEEEcCCceEEEEEEEEcCceEEE
Confidence            45789999999999998744 44467889999999999999999985      5889999999997766  5666743 2


Q ss_pred             CCceEEEcccHHHHHHHHHHHHHh-----cCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEc---C
Q 017102          174 PHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL---P  245 (377)
Q Consensus       174 ~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---p  245 (377)
                      ........+||.++++...+++-+     .|.++.  .+...+..+++..-       .....+  ++......++   -
T Consensus       252 laTnGDThLGGEDFD~rvm~~fiklykkK~gkDv~--kdnkA~~KLrRe~E-------kAKRaL--Ssqhq~riEIeS~f  320 (663)
T KOG0100|consen  252 LATNGDTHLGGEDFDQRVMEYFIKLYKKKHGKDVR--KDNKAVQKLRREVE-------KAKRAL--SSQHQVRIEIESLF  320 (663)
T ss_pred             EecCCCcccCccchHHHHHHHHHHHHhhhcCCccc--hhhHHHHHHHHHHH-------HHHhhh--ccccceEEeeeecc
Confidence            333446789999999988776632     233332  23444444444311       000111  1111111111   2


Q ss_pred             CCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcC--CHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhC
Q 017102          246 DGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKC--DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA  323 (377)
Q Consensus       246 d~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~--~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~  323 (377)
                      ||..++-.-.|..+.|+          ...|...-.+-+++.  +.++++.-+.-|||+||+++||-    +++-|.+.+
T Consensus       321 dG~DfSEtLtRAkFEEl----------NmDLFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPK----vQqllk~fF  386 (663)
T KOG0100|consen  321 DGVDFSETLTRAKFEEL----------NMDLFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPK----VQQLLKDFF  386 (663)
T ss_pred             ccccccchhhhhHHHHh----------hhHHHHHhhHHHHHHHhhcCcccccCceEEEecCcccChh----HHHHHHHHh
Confidence            22222211122222221          011222222222332  55677777889999999999994    455555544


Q ss_pred             CCCceEEEECCCCCccccchhhHHhhcc
Q 017102          324 PSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .-..   ...--+|+-++..||++-|-.
T Consensus       387 ~GKe---pskGinPdEAVAYGAAVQaGv  411 (663)
T KOG0100|consen  387 NGKE---PSKGINPDEAVAYGAAVQAGV  411 (663)
T ss_pred             CCCC---ccCCCChHHHHHhhhhhhhcc
Confidence            2110   111235677888888876653

>PRK09472 ftsA cell division protein FtsA; Reviewed

Probab=99.48  E-value=3.1e-13  Score=130.58  Aligned_cols=202  Identities=18%  Similarity=0.201  Sum_probs=134.6

Q ss_pred             CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102          114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~  188 (377)
                      +....+.+.+ +++..|+....++.+|+|+++++..     ...+|||+|+++|+++.+.+|.++  ....+++||++++
T Consensus       164 ~~~~~~~~~~-a~~~aGl~v~~iv~ep~Aaa~a~l~~~e~~~gv~vvDiGggtTdisv~~~G~l~--~~~~i~~GG~~it  240 (420)
T PRK09472        164 HNDMAKNIVK-AVERCGLKVDQLIFAGLASSYAVLTEDERELGVCVVDIGGGTMDIAVYTGGALR--HTKVIPYAGNVVT  240 (420)
T ss_pred             chHHHHHHHH-HHHHcCCeEeeEEehhhHHHHHhcChhhhhcCeEEEEeCCCceEEEEEECCEEE--EEeeeechHHHHH
Confidence            4455566666 4589999999999999999998753     358999999999999999999888  7788999999999


Q ss_pred             HHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC--C-ceEeeCCccccccccCCC
Q 017102          189 DALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QVITIGAERFRCPEVLFQ  265 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd--~-~~i~i~~~~~~~~e~lf~  265 (377)
                      +.+...|.         ...+.+|++|.+++....+..          .....+.+++  + ....++  +..+.+++..
T Consensus       241 ~dIa~~l~---------i~~~~AE~lK~~~g~~~~~~~----------~~~~~i~v~~~~~~~~~~i~--~~~l~~ii~~  299 (420)
T PRK09472        241 SDIAYAFG---------TPPSDAEAIKVRHGCALGSIV----------GKDESVEVPSVGGRPPRSLQ--RQTLAEVIEP  299 (420)
T ss_pred             HHHHHHhC---------cCHHHHHHHHHhcceeccccC----------CCCceeEecCCCCCCCeEEc--HHHHHHHHHH
Confidence            99987662         134679999998876432210          0011222221  1 111111  1111122111


Q ss_pred             CCCCCCCCCChhHHHHHHHhcCCHHHHH-----hhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECC------
Q 017102          266 PSMIGMESAGIHETTYNSIMKCDVDIRK-----DLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP------  334 (377)
Q Consensus       266 p~~~~~~~~~l~~~I~~~i~~~~~~~r~-----~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~------  334 (377)
                      .      ...|.+.|.+++..++..++.     .+...|+||||+|+|||+.+.+++.+..      ++++..|      
T Consensus       300 r------~~ei~~~i~~~l~~~~~~l~~~g~~~~~~~givLtGG~a~lpgi~e~~~~~f~~------~vri~~P~~~~g~  367 (420)
T PRK09472        300 R------YTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFHT------QVRIGAPLNITGL  367 (420)
T ss_pred             H------HHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEeCchhccccHHHHHHHHhCC------CeEEeCCcccCCC
Confidence            0      011344555666555544443     3556799999999999999999988842      3444332      


Q ss_pred             ----CCCccccchhhHHhhcc
Q 017102          335 ----PERKYSVWIGGSILASL  351 (377)
Q Consensus       335 ----~~~~~~~w~Gasi~a~l  351 (377)
                          .+|.|++-.|...|+.-
T Consensus       368 ~~~~~~P~~ata~Gl~~~~~~  388 (420)
T PRK09472        368 TDYAQEPYYSTAVGLLHYGKE  388 (420)
T ss_pred             hhhcCCcHHHHHHHHHHHhhh
Confidence                36889999999888763

>TIGR01174 ftsA cell division protein FtsA

Probab=99.45  E-value=7e-13  Score=126.45  Aligned_cols=174  Identities=16%  Similarity=0.207  Sum_probs=115.6

Q ss_pred             CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102          114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~  188 (377)
                      ++...+.+.+++ +.+|+..+.+..+|+|+++++..     ...+|||+|+++|+++.+.+|.+.  ....+++||++++
T Consensus       156 ~~~~v~~~~~~~-~~aGl~~~~i~~~~~A~a~a~~~~~~~~~~~~vvDiG~gtt~i~i~~~g~~~--~~~~i~~GG~~it  232 (371)
T TIGR01174       156 SSTILRNLVKCV-ERCGLEVDNIVLSGLASAIAVLTEDEKELGVCLIDIGGGTTDIAVYTGGSIR--YTKVIPIGGNHIT  232 (371)
T ss_pred             EHHHHHHHHHHH-HHcCCCeeeEEEhhhhhhhhhcCcchhcCCEEEEEeCCCcEEEEEEECCEEE--EEeeecchHHHHH
Confidence            566667777666 88999999999999999987643     357999999999999999999877  4678899999999


Q ss_pred             HHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC---CceEeeCCcccc-ccccCC
Q 017102          189 DALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD---GQVITIGAERFR-CPEVLF  264 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd---~~~i~i~~~~~~-~~e~lf  264 (377)
                      +.+.+.+.         .....+|++|.+++....+.          ......+.++.   +....++...+. +.+..+
T Consensus       233 ~~i~~~l~---------~~~~~AE~lK~~~~~~~~~~----------~~~~~~i~~~~~~~~~~~~is~~~l~~ii~~~~  293 (371)
T TIGR01174       233 KDIAKALR---------TPLEEAERIKIKYGCASIPL----------EGPDENIEIPSVGERPPRSLSRKELAEIIEARA  293 (371)
T ss_pred             HHHHHHhC---------CCHHHHHHHHHHeeEecccC----------CCCCCEEEeccCCCCCCeEEcHHHHHHHHHHHH
Confidence            99887652         13567999999998753221          00011222211   112222221111 111111


Q ss_pred             CCCCCCCCCCChhHHHH-HHHhcCCHHHHHhhhcC-eEEecCCCCCCChHHHHHHHHhh
Q 017102          265 QPSMIGMESAGIHETTY-NSIMKCDVDIRKDLYGN-IVLSGGSTMFPGIADRMSKEISA  321 (377)
Q Consensus       265 ~p~~~~~~~~~l~~~I~-~~i~~~~~~~r~~l~~n-Ivl~GG~s~i~g~~~rl~~el~~  321 (377)
                      .         .+.+.|. +.+.+...+  . -+.+ |+||||+|++||+.+.+.+.+..
T Consensus       294 ~---------ei~~~i~~~~L~~~~~~--~-~i~~gIvLtGG~S~ipgi~~~l~~~~~~  340 (371)
T TIGR01174       294 E---------EILEIVKQKELRKSGFK--E-ELNGGIVLTGGGAQLEGIVELAEKVFDN  340 (371)
T ss_pred             H---------HHHHHHHHHHHHhcCCc--c-cCCCEEEEeChHHcccCHHHHHHHHhCC
Confidence            1         1444554 555544322  2 2345 99999999999999999998843

This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.

>KOG0101 consensus Molecular chaperones HSP70/HSC70, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=99.44  E-value=3.4e-12  Score=124.29  Aligned_cols=214  Identities=17%  Similarity=0.216  Sum_probs=133.4

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-------ceEEEEeCCCCceEEEEee--CCe-e
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGY-A  172 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~v~pv~--~g~-~  172 (377)
                      ..++++.|..++..+|+..-+.. ..+|++.+.++++|.||++++|.       .+-+|.|+|+++.+|+++.  +|. .
T Consensus       144 ~~aviTVPa~F~~~Qr~at~~A~-~iaGl~vlrii~EPtAaalAygl~k~~~~~~~VlI~DlGggtfdvs~l~i~gG~~~  222 (620)
T KOG0101|consen  144 KKAVVTVPAYFNDSQRAATKDAA-LIAGLNVLRIINEPTAAALAYGLDKKVLGERNVLIFDLGGGTFDVSVLSLEGGIFE  222 (620)
T ss_pred             eeEEEEecCCcCHHHHHHHHHHH-HhcCCceeeeecchHHHHHHhhccccccceeeEEEEEcCCCceeeeeEEeccchhh
Confidence            45899999999999999877777 77999999999999999999873       4669999999998888663  342 2


Q ss_pred             cCCceEEEcccHHHHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceE
Q 017102          173 LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY  242 (377)
Q Consensus       173 l~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~  242 (377)
                      +.......++||.++++.|.+++...     +.+......     ...+|+.|+.+...                ...+.
T Consensus       223 vkat~gd~~lGGedf~~~l~~h~~~ef~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~----------------~~~~i  286 (620)
T KOG0101|consen  223 VKATAGDTHLGGEDFDNKLVNHFAAEFKRKAGKDIGGNARALRRLRTACERAKRTLSSS----------------TQASI  286 (620)
T ss_pred             hhhhcccccccchhhhHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHhhhccc----------------cccee
Confidence            23344467999999999998877421     111111000     11122233322111                11111


Q ss_pred             ---EcCCCceEeeCCccccc---cccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHH
Q 017102          243 ---ELPDGQVITIGAERFRC---PEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS  316 (377)
Q Consensus       243 ---~~pd~~~i~i~~~~~~~---~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~  316 (377)
                         .+-+|..+...-.|.++   ..-||..         ..+.+..+|...-  +-+..++.||||||.+++|.++.-++
T Consensus       287 ~vdsL~~g~d~~~~itrarfe~l~~dlf~~---------~~~~v~~~L~da~--~dk~~i~~vvlVGGstriPk~~~ll~  355 (620)
T KOG0101|consen  287 EIDSLYEGIDFYTSITRARFEELNADLFRS---------TLEPVEKALKDAK--LDKSDIDEVVLVGGSTRIPKVQKLLE  355 (620)
T ss_pred             ccchhhccccccceeehhhhhhhhhHHHHH---------HHHHHHHHHHhhc--cCccCCceeEEecCcccchHHHHHHH
Confidence               12234444333333332   2334433         3344445554432  23445678999999999997766665


Q ss_pred             HHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          317 KEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       317 ~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .-+..       -++..+-+|+.++..||++.|.+
T Consensus       356 d~f~~-------k~~~~sinpDeavA~GAavqaa~  383 (620)
T KOG0101|consen  356 DFFNG-------KELNKSINPDEAVAYGAAVQAAI  383 (620)
T ss_pred             HHhcc-------cccccCCCHHHHHHhhHHHHhhh
Confidence            44422       12234457899999999999876

>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]

Probab=99.34  E-value=6e-12  Score=119.03  Aligned_cols=201  Identities=19%  Similarity=0.259  Sum_probs=136.3

Q ss_pred             CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcC-----CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102          114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-----~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~  188 (377)
                      +....++|.+++ |+.+..-..++-+|+|++.+.=     .-++++||+|+++|+|+.+.+|.+.  +...+|+||++++
T Consensus       163 ~~~~~~Nl~k~v-~r~gl~v~~i~l~plAsa~a~L~~dEkelGv~lIDiG~GTTdIai~~~G~l~--~~~~ipvgG~~vT  239 (418)
T COG0849         163 PKNILENLEKCV-ERAGLKVDNIVLEPLASALAVLTEDEKELGVALIDIGGGTTDIAIYKNGALR--YTGVIPVGGDHVT  239 (418)
T ss_pred             chHHHHHHHHHH-HHhCCCeeeEEEehhhhhhhccCcccHhcCeEEEEeCCCcEEEEEEECCEEE--EEeeEeeCccHHH
Confidence            566667777766 8899999999999999987663     2579999999999999999999999  7788999999999


Q ss_pred             HHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC--CceEeeCCccccccccCCCC
Q 017102          189 DALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--GQVITIGAERFRCPEVLFQP  266 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd--~~~i~i~~~~~~~~e~lf~p  266 (377)
                      ..+...|.         .+.+.+|++|.+++....+..          .....+.+|.  +.. ...-.+....++.=  
T Consensus       240 ~DIa~~l~---------t~~~~AE~iK~~~g~a~~~~~----------~~~~~i~v~~vg~~~-~~~~t~~~ls~II~--  297 (418)
T COG0849         240 KDIAKGLK---------TPFEEAERIKIKYGSALISLA----------DDEETIEVPSVGSDI-PRQVTRSELSEIIE--  297 (418)
T ss_pred             HHHHHHhC---------CCHHHHHHHHHHcCccccCcC----------CCcceEecccCCCcc-cchhhHHHHHHHHH--
Confidence            99998882         245779999999986543321          1122222221  111 00001111111110  


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECC----------CC
Q 017102          267 SMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP----------PE  336 (377)
Q Consensus       267 ~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~----------~~  336 (377)
                          .....+.+++...|++.-..  ..+...|+||||++++||+.+-.+.-+..      ++|+..|          .+
T Consensus       298 ----aR~~Ei~~lV~~~l~~~g~~--~~~~~gvVlTGG~a~l~Gi~elA~~if~~------~vRig~P~~~~Gl~d~~~~  365 (418)
T COG0849         298 ----ARVEEILELVKAELRKSGLP--NHLPGGVVLTGGGAQLPGIVELAERIFGR------PVRLGVPLNIVGLTDIARN  365 (418)
T ss_pred             ----hhHHHHHHHHHHHHHHcCcc--ccCCCeEEEECchhcCccHHHHHHHhcCC------ceEeCCCccccCchhhccC
Confidence                00111334555566554322  56778899999999999999887766643      3444333          35


Q ss_pred             CccccchhhHHhhcc
Q 017102          337 RKYSVWIGGSILASL  351 (377)
Q Consensus       337 ~~~~~w~Gasi~a~l  351 (377)
                      |.|++-.|.-.++..
T Consensus       366 p~fs~avGl~~~~~~  380 (418)
T COG0849         366 PAFSTAVGLLLYGAL  380 (418)
T ss_pred             chhhhhHHHHHHHhh
Confidence            899999999888875

>TIGR01175 pilM type IV pilus assembly protein PilM

Probab=99.30  E-value=2.7e-10  Score=107.84  Aligned_cols=155  Identities=16%  Similarity=0.181  Sum_probs=106.5

Q ss_pred             CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhc----------C-Cc-eEEEEeCCCCceEEEEeeCCeecCCceEEEc
Q 017102          114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS----------G-RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLD  181 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~----------g-~~-~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~  181 (377)
                      ++...+.+.+++ +..|+.-..+..+++|..-+.          . .. +.++||+|+++|+++.+.+|.++  ....++
T Consensus       141 ~~~~v~~~~~~~-~~aGl~~~~id~~~~Al~~~~~~~~~~~~~~~~~~~~~~lvdiG~~~t~l~i~~~g~~~--~~r~i~  217 (348)
T TIGR01175       141 RKEVVDSRLHAL-KLAGLEPKVVDVESFALLRAWRLLGEQLASRTYRLTDAALVDIGATSSTLNLLHPGRML--FTREVP  217 (348)
T ss_pred             cHHHHHHHHHHH-HHcCCceEEEecHHHHHHHHHHHHHhhCccccccCceEEEEEECCCcEEEEEEECCeEE--EEEEee
Confidence            777788888776 889999888888888764322          1 22 48999999999999999999998  778999


Q ss_pred             ccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccc
Q 017102          182 LAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPE  261 (377)
Q Consensus       182 ~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e  261 (377)
                      +||.++++.+.+.+   +.      +.+.++++|.+.++.... ..+                              ..+
T Consensus       218 ~G~~~i~~~i~~~~---~~------~~~~Ae~~k~~~~~~~~~-~~~------------------------------~~~  257 (348)
T TIGR01175       218 FGTRQLTSELSRAY---GL------NPEEAGEAKQQGGLPLLY-DPE------------------------------VLR  257 (348)
T ss_pred             chHHHHHHHHHHHc---CC------CHHHHHHHHhcCCCCCch-hHH------------------------------HHH
Confidence            99999999987665   11      345688888765532110 000                              000


Q ss_pred             cCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHh
Q 017102          262 VLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIS  320 (377)
Q Consensus       262 ~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~  320 (377)
                      ..++         .+..-|.+++.-.-........+.|+||||+++++||.+.|++++.
T Consensus       258 ~~~~---------~l~~eI~~~l~~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~~~l~  307 (348)
T TIGR01175       258 RFKG---------ELVDEIRRSLQFFTAQSGTNSLDGLVLAGGGATLSGLDAAIYQRLG  307 (348)
T ss_pred             HHHH---------HHHHHHHHHHHhhcCCCCCcccceEEEECccccchhHHHHHHHHHC
Confidence            0000         1334445555332111122346789999999999999999999995

This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.

>PRK13917 plasmid segregation protein ParM; Provisional

Probab=99.25  E-value=3.4e-10  Score=106.39  Aligned_cols=184  Identities=13%  Similarity=0.142  Sum_probs=107.1

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCC-c------------cccCCCcc---ceeccchhcccCcceeec
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG-V------------MVGMGQKD---AYVGDEAQSKRGILTLKY   71 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~-~------------~~~~~~~~---~~vg~~~~~~~~~~~~~~   71 (377)
                      .++.||+|-.+||+-....   ...+|+.++...... .            .+..++..   +++|+++......  ...
T Consensus         3 ~v~~iDiG~g~tK~~~~~~---~~~~ps~~~~~~~~~~~~~~~~~~~~~~~~v~v~g~~~~~y~~G~~~~~~~~~--~~~   77 (344)
T PRK13917          3 YVMALDFGNGFVKGKINDE---KFVIPSRYGRKTNENNQLSGFVDNKLDVSEFIINGNEDEVLLFGNDLDKTTNT--GKD   77 (344)
T ss_pred             eEEEEeccCCeEEEEecCC---CEEcceeccCCCCccccccccCCCCCcceEEEecCcccccEEEcchhhhcccc--cCC
Confidence            4899999999999866422   235576654332111 1            11122333   6777765322110  000


Q ss_pred             ccc-CCccCCHHHHHHHHHHhcccccccC--CCCCcEEE--EeCCCCCHHH-HHHHHhhhccc-----------CCCCeE
Q 017102           72 PIE-HGIVSNWDDMEKIWHHTFYNELRVA--PEEHPILL--TEAPLNPKAN-REKMTQIMFET-----------FNAPAM  134 (377)
Q Consensus        72 p~~-~g~i~~~~~~~~~~~~~~~~~L~~~--~~~~~vvl--~~p~~~~~~~-~~~l~~~lfe~-----------~~~~~v  134 (377)
                      +.. ++.. .-+.++.++..++...+...  .+...++|  -.|...-... ++.+.+.+-..           ..+..|
T Consensus        78 ~~~~~~~y-~~~~y~~L~~~Al~~~~~~~~~~~~~~v~l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V  156 (344)
T PRK13917         78 TYSTNDRY-DIKQFKTLVKCALAGLAARTVPEEVVEVVVATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGV  156 (344)
T ss_pred             cccccccc-cchhHHHHHHHHHHHhhhhhcCCCcceeEEEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEE
Confidence            110 1111 12345666555542222211  11223333  3554432222 24555444221           346789


Q ss_pred             EeechhhhhhhhcCC-------------ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHh
Q 017102          135 YVAIQAVLSLYASGR-------------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE  197 (377)
Q Consensus       135 ~~~~~~~~a~~~~g~-------------~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~  197 (377)
                      .++|+|++|++....             ...+|||+|+.+|+++.+.++.+.......++.|..++.+.+.+.+..
T Consensus       157 ~V~pQ~~ga~~~~~~~~~g~~~~~~~~~~~ilvIDIG~~TtD~~v~~~~~~~~~~s~s~~~G~~~~~~~I~~~i~~  232 (344)
T PRK13917        157 KVVAQPMGTLLDLYLDNDGVVADKAFEEGKVSVIDFGSGTTDLDTIQNLKRVEEESFVIPKGTIDVYKRIASHISK  232 (344)
T ss_pred             EEecccHHHHHHHHhcccCcccchhcccCcEEEEEcCCCcEEEEEEeCcEEcccccccccchHHHHHHHHHHHHHh
Confidence            999999999865422             356999999999999999999998877778999999999999999853

>KOG0104 consensus Molecular chaperones GRP170/SIL1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=99.19  E-value=1.2e-10  Score=113.46  Aligned_cols=94  Identities=16%  Similarity=0.173  Sum_probs=77.4

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC----------ceEEEEeCCCCceEEEEeeCCee
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVSHTVPIYEGYA  172 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~----------~~~lVVDiG~~~t~v~pv~~g~~  172 (377)
                      ..+++++|+++.+.+|+.+++.+ +.+|...++++++..++++.+|.          +.-++.|+|+++|+++.|.--.+
T Consensus       159 kd~ViTVP~~F~qaeR~all~Aa-~iagl~vLqLind~~a~Al~ygv~rRk~i~~~~q~~i~YDMGs~sT~Ativsy~~v  237 (902)
T KOG0104|consen  159 KDMVITVPPFFNQAERRALLQAA-QIAGLNVLQLINDGTAVALNYGVFRRKEINETPQHYIFYDMGSGSTSATIVSYQLV  237 (902)
T ss_pred             hheEEeCCcccCHHHHHHHHHHH-HhcCchhhhhhccchHHHhhhhhhccccCCCCceEEEEEecCCCceeEEEEEEEee
Confidence            56999999999999999999999 88999999999999999999884          46799999999999998843222


Q ss_pred             cCCc-------------eEEEcccHHHHHHHHHHHHHh
Q 017102          173 LPHA-------------ILRLDLAGRDLTDALMKILTE  197 (377)
Q Consensus       173 l~~~-------------~~~~~~GG~~l~~~l~~~l~~  197 (377)
                      -...             .-...+||..++..|+.+|..
T Consensus       238 ~~k~~g~~~p~i~~~gvGfd~tLGG~e~~~rLr~~l~~  275 (902)
T KOG0104|consen  238 KTKEQGGKQPQIQVLGVGFDRTLGGLEMTMRLRDHLAN  275 (902)
T ss_pred             ccccccCccceEEEEeeccCCccchHHHHHHHHHHHHH
Confidence            1111             112378999999999999865

>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A

Probab=99.17  E-value=9.8e-10  Score=103.55  Aligned_cols=186  Identities=20%  Similarity=0.300  Sum_probs=109.1

Q ss_pred             CHHHHHHHHHHhcccccccCCCC-----------------CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhh
Q 017102           80 NWDDMEKIWHHTFYNELRVAPEE-----------------HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL  142 (377)
Q Consensus        80 ~~~~~~~~~~~~~~~~L~~~~~~-----------------~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~  142 (377)
                      +.+.++..+++=..+++..+.++                 ..|+++.-   ++...+.+++++ +.+|.+-..+=-++.|
T Consensus        86 ~~~el~~~I~~Ea~~~iP~~~~e~~~D~~vl~~~~~~~~~~~Vll~Aa---~k~~v~~~~~~~-~~aGL~~~~vDv~~~A  161 (340)
T PF11104_consen   86 PEKELEEAIRWEAEQYIPFPLEEVVFDYQVLGESEDGEEKMEVLLVAA---PKEIVESYVELF-EEAGLKPVAVDVEAFA  161 (340)
T ss_dssp             -HHHHHHHHHHHHGGG-SS----EEEEEEESS-GS-TTSEEEEEEEEE---EHHHHHHHHHHH-HHTT-EEEEEEEHHHH
T ss_pred             CHHHHHHHHHHHHHhhCCCChhHeEEEEEEeccCCCCCCceEEEEEEE---cHHHHHHHHHHH-HHcCCceEEEeehHHH
Confidence            44667777777665666654322                 33444432   677777777666 8888876555444443


Q ss_pred             --hhhhc---------CCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHH
Q 017102          143 --SLYAS---------GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV  211 (377)
Q Consensus       143 --a~~~~---------g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~  211 (377)
                        -+|..         ...+-++||+|+..|.++.+.+|.++  ..+.+++||+++++.+.+.+         ..+.+.+
T Consensus       162 l~r~~~~~~~~~~~~~~~~~~~lvdiG~~~t~~~i~~~g~~~--f~R~i~~G~~~l~~~i~~~~---------~i~~~~A  230 (340)
T PF11104_consen  162 LARLFEFLEPQLPDEEDAETVALVDIGASSTTVIIFQNGKPI--FSRSIPIGGNDLTEAIAREL---------GIDFEEA  230 (340)
T ss_dssp             GGGGGHHHHHTST----T-EEEEEEE-SS-EEEEEEETTEEE--EEEEES-SHHHHHHHHHHHT---------T--HHHH
T ss_pred             HHHHHHHHHHhCCcccccceEEEEEecCCeEEEEEEECCEEE--EEEEEeeCHHHHHHHHHHhc---------CCCHHHH
Confidence              33332         12356999999999999999999999  77889999999999998775         2244567


Q ss_pred             HHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHH
Q 017102          212 RDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDI  291 (377)
Q Consensus       212 ~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~  291 (377)
                      +++|.+... ..+...+                              +.+.+++.         |..-|.+++.-.-...
T Consensus       231 e~~k~~~~l-~~~~~~~------------------------------~l~~~~~~---------l~~EI~rsl~~y~~~~  270 (340)
T PF11104_consen  231 EELKRSGGL-PEEYDQD------------------------------ALRPFLEE---------LAREIRRSLDFYQSQS  270 (340)
T ss_dssp             HHHHHHT-------HHH------------------------------HHHHHHHH---------HHHHHHHHHHHHHHH-
T ss_pred             HHHHhcCCC-CcchHHH------------------------------HHHHHHHH---------HHHHHHHHHHHHHhcC
Confidence            777765432 1111000                              00011111         4455555555433333


Q ss_pred             HHhhhcCeEEecCCCCCCChHHHHHHHHh
Q 017102          292 RKDLYGNIVLSGGSTMFPGIADRMSKEIS  320 (377)
Q Consensus       292 r~~l~~nIvl~GG~s~i~g~~~rl~~el~  320 (377)
                      ...-++.|+||||+|+++|+.+.|.++|.
T Consensus       271 ~~~~i~~I~L~Ggga~l~gL~~~l~~~l~  299 (340)
T PF11104_consen  271 GGESIERIYLSGGGARLPGLAEYLSEELG  299 (340)
T ss_dssp             -----SEEEEESGGGGSTTHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCccchhhHHHHHHHHHC
Confidence            34456889999999999999999999993

>TIGR03739 PRTRC_D PRTRC system protein D

Probab=99.17  E-value=9.5e-10  Score=102.68  Aligned_cols=183  Identities=12%  Similarity=0.061  Sum_probs=114.3

Q ss_pred             EeCCCCceEEeeeC-CCCC-CCCCCceEEeeCCCC------------ccccCCCccceeccchhcccCcceeeccccCCc
Q 017102           12 CDNGTGMVKAGFAG-DDAP-RAVFPSIVGRPRHTG------------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGI   77 (377)
Q Consensus        12 ID~Gs~~~k~G~~~-~~~P-~~~~ps~~~~~~~~~------------~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~   77 (377)
                      ||+|-.++|+-+.. +..+ ...+||.++......            ..+..++..++||+.+..... ....+.+.+..
T Consensus         2 iDvGyg~~K~~~~~~~~~~~~~~fPS~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~y~VG~~a~~~~~-~~~~~~~~~~~   80 (320)
T TIGR03739         2 VDVGYGNTKFVSQVRGTDIRCASFPSVAPPSSRESPAWPGGSEARKTVCVPVGGLFYEVGPDVSLAAD-TNRARQLHDEY   80 (320)
T ss_pred             ccccCCceEEEecCCCCceeeEEcccccccccccccccccccCCCceEEEEECCEEEEeccchhhccc-Cccceeccccc
Confidence            89999999987653 2232 346787764322111            111134566678876633211 01111222222


Q ss_pred             cCCHHHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhccc--------CCCCeEEeechhhhhhhhc--
Q 017102           78 VSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFET--------FNAPAMYVAIQAVLSLYAS--  147 (377)
Q Consensus        78 i~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~--------~~~~~v~~~~~~~~a~~~~--  147 (377)
                      ..+ +....++.+++.. ... .....+++-.|...-..+++.+.+.+-..        ..+..|.++|+++.|.+..  
T Consensus        81 ~~~-~~~~~L~~~Al~~-~~~-~~~~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~  157 (320)
T TIGR03739        81 TET-PEYMALLRGALAL-SKV-REIDQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVA  157 (320)
T ss_pred             cCC-HHHHHHHHHHHHH-hcC-CCCCEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHh
Confidence            222 3445555555422 222 11123555567666566777777766432        4677899999999887653  


Q ss_pred             -------CCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhc
Q 017102          148 -------GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER  198 (377)
Q Consensus       148 -------g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~  198 (377)
                             ...+.+|||+|+.+|+++.+.++.+..+...+.+.|...+.+.+.+.+.++
T Consensus       158 ~~~~~~~~~~~~lVIDIG~~TtD~~~~~~~~~~~~~s~s~~~G~~~~~~~I~~~i~~~  215 (320)
T TIGR03739       158 QHGKLLTGKEQSLIIDPGYFTFDWLVARGMRLVQKRSGSVNGGMSDIYRLLAAEISKD  215 (320)
T ss_pred             cCCCcccCcCcEEEEecCCCeeeeehccCCEEcccccCCchhHHHHHHHHHHHHHHhh
Confidence                   235679999999999999888888887777788999999999999988644

A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.

>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]

Probab=99.17  E-value=1.7e-11  Score=101.59  Aligned_cols=237  Identities=18%  Similarity=0.191  Sum_probs=146.9

Q ss_pred             CCCCcEEEeCCCCceEEeeeC-CCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHH-
Q 017102            5 EDIQPLVCDNGTGMVKAGFAG-DDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD-   82 (377)
Q Consensus         5 ~~~~~vvID~Gs~~~k~G~~~-~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~-   82 (377)
                      +..-.|.+|+||..+..=.-. +..|-..                                 .++.-+-+++|.+.|+- 
T Consensus        27 ~sk~~vGVDLGT~~iV~~vlD~d~~Pvag---------------------------------~~~~advVRDGiVvdf~e   73 (277)
T COG4820          27 ESKLWVGVDLGTCDIVSMVLDRDGQPVAG---------------------------------CLDWADVVRDGIVVDFFE   73 (277)
T ss_pred             cCceEEEeecccceEEEEEEcCCCCeEEE---------------------------------EehhhhhhccceEEehhh
Confidence            345678999999998864443 3344211                                 01122334667776653 


Q ss_pred             ---HHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCC
Q 017102           83 ---DMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD  159 (377)
Q Consensus        83 ---~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~  159 (377)
                         .++++.+.+ .+.|++...  ..--..||-+.....+....+ .|..|....+.+++|.++++-.+..+|-|||+|+
T Consensus        74 aveiVrrlkd~l-Ek~lGi~~t--ha~taiPPGt~~~~~ri~iNV-iESAGlevl~vlDEPTAaa~vL~l~dg~VVDiGG  149 (277)
T COG4820          74 AVEIVRRLKDTL-EKQLGIRFT--HAATAIPPGTEQGDPRISINV-IESAGLEVLHVLDEPTAAADVLQLDDGGVVDIGG  149 (277)
T ss_pred             HHHHHHHHHHHH-HHhhCeEee--eccccCCCCccCCCceEEEEe-ecccCceeeeecCCchhHHHHhccCCCcEEEeCC
Confidence               233444444 466776432  112223444433333333333 4899999999999999999999999999999999


Q ss_pred             CceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCcc
Q 017102          160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE  239 (377)
Q Consensus       160 ~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~  239 (377)
                      ++|-|+.+-+|.++  ....-+.||.+++-.|.-.   +++      +.+.+|+.|+..--                   
T Consensus       150 GTTGIsi~kkGkVi--y~ADEpTGGtHmtLvlAG~---ygi------~~EeAE~~Kr~~k~-------------------  199 (277)
T COG4820         150 GTTGISIVKKGKVI--YSADEPTGGTHMTLVLAGN---YGI------SLEEAEQYKRGHKK-------------------  199 (277)
T ss_pred             CcceeEEEEcCcEE--EeccCCCCceeEEEEEecc---cCc------CHhHHHHhhhcccc-------------------
Confidence            99999999999999  5566788998877655421   222      33456766664210                   


Q ss_pred             ceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHH
Q 017102          240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI  319 (377)
Q Consensus       240 ~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el  319 (377)
                             ++      |-|......++.         +.+.+.+-|...++       ..+.|+||.+..||+++-++++|
T Consensus       200 -------~~------Eif~~v~PV~eK---------MAeIv~~hie~~~i-------~dl~lvGGac~~~g~e~~Fe~~l  250 (277)
T COG4820         200 -------GE------EIFPVVKPVYEK---------MAEIVARHIEGQGI-------TDLWLVGGACMQPGVEELFEKQL  250 (277)
T ss_pred             -------ch------hcccchhHHHHH---------HHHHHHHHhccCCC-------cceEEecccccCccHHHHHHHHh
Confidence                   00      001100111111         44555555555544       46999999999999999999998


Q ss_pred             hhhCCCCceEEEECCCCCccccchhh
Q 017102          320 SALAPSSMKIKVVAPPERKYSVWIGG  345 (377)
Q Consensus       320 ~~~~~~~~~v~v~~~~~~~~~~w~Ga  345 (377)
                              +..++.|..|.|..-+|-
T Consensus       251 --------~l~v~~P~~p~y~TPLgI  268 (277)
T COG4820         251 --------ALQVHLPQHPLYMTPLGI  268 (277)
T ss_pred             --------ccccccCCCcceechhhh
Confidence                    345555555566555553

>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=98.98  E-value=1.4e-08  Score=98.80  Aligned_cols=240  Identities=13%  Similarity=0.154  Sum_probs=138.3

Q ss_pred             CCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC------------ceEEEEeCCCCceEEEEe--
Q 017102          102 EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVSHTVPI--  167 (377)
Q Consensus       102 ~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~~~lVVDiG~~~t~v~pv--  167 (377)
                      -..++|.+|.++...+|..+++++ ...|++-+.++++..|+++++|.            .+-..||+||+.++++.+  
T Consensus       137 v~DcvIavP~~FTd~qRravldAA-~iagLn~lrLmnd~TA~Al~ygiyKtDLP~~~ekpr~v~fvD~GHS~~q~si~aF  215 (727)
T KOG0103|consen  137 VSDCVIAVPSYFTDSQRRAVLDAA-RIAGLNPLRLMNDTTATALAYGIYKTDLPENEEKPRNVVFVDIGHSSYQVSIAAF  215 (727)
T ss_pred             CCCeeEeccccccHHHHHHHHhHH-hhcCccceeeeecchHhHhhcccccccCCCcccCcceEEEEecccccceeeeeee
Confidence            457999999999999999999999 88999999999999999999983            357899999999887754  


Q ss_pred             eCCeec-CCceEEEcccHHHHHHHHHHHHHhcC---CCc--cChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCC
Q 017102          168 YEGYAL-PHAILRLDLAGRDLTDALMKILTERG---YSF--TTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSS  236 (377)
Q Consensus       168 ~~g~~l-~~~~~~~~~GG~~l~~~l~~~l~~~~---~~~--~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~  236 (377)
                      --|..- ..+...-.+||+++++.|.+++....   +.+  .+...     ...++.+|+.+..-              .
T Consensus       216 ~kG~lkvl~ta~D~~lGgr~fDe~L~~hfa~efk~kykidv~sn~kA~lRL~~~~EKlKK~lSAN--------------~  281 (727)
T KOG0103|consen  216 TKGKLKVLATAFDRKLGGRDFDEALIDHFAKEFKTKYKIDVRSNAKAKLRLLAECEKLKKVLSAN--------------T  281 (727)
T ss_pred             ccCcceeeeeecccccccchHHHHHHHHHHHHhccccccchhhchhHHHHHHHHHHHHHHHhhcC--------------c
Confidence            334321 22233448999999999999886531   111  11111     22345555544321              0


Q ss_pred             CccceEEc-CCCceEeeCCccccccc---cCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChH
Q 017102          237 AVEKSYEL-PDGQVITIGAERFRCPE---VLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIA  312 (377)
Q Consensus       237 ~~~~~~~~-pd~~~i~i~~~~~~~~e---~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~  312 (377)
                      ..+-..+. =+...+.-.-.|..+.|   .+++.         +..-+.+++..  ..+...-++-|=++||+|+||-++
T Consensus       282 ~~plNIEcfM~d~dvs~~i~ReEfEel~~plL~r---------v~~p~~~~l~d--~~l~~edi~~VEiVGg~sripaik  350 (727)
T KOG0103|consen  282 ELPLNIECFMNDKDVSSKIKREEFEELSAPLLER---------VEVPLLKALAD--AKLKVEDIHAVEIVGGLSRIPAIK  350 (727)
T ss_pred             CCCcchhheeecchhhhhccHHHHHHHHHHHHHh---------hhHHHHHHHHH--hcCccccceeEEEecCcccchHHH
Confidence            00000000 00001110011111111   11110         11111222221  112222335689999999999888


Q ss_pred             HHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc--cccccccccHHHHhhcCCcccccc
Q 017102          313 DRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL--STFQQMWIAKSEYDESGPSIVHRK  375 (377)
Q Consensus       313 ~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l--~~~~~~~itr~~y~e~G~~~~~~k  375 (377)
                      +.|..-......    .    ..+.+.++-+|+++-...  +.|.-.|.+.+|-..+-.++-|++
T Consensus       351 e~Is~~Fgke~s----~----TlN~dEavarG~ALqcAIlSP~frVRef~v~Di~pysIs~~w~~  407 (727)
T KOG0103|consen  351 EMISDFFGKELS----R----TLNQDEAVARGAALQCAILSPTFRVREFSVEDIVPYSISLRWVK  407 (727)
T ss_pred             HHHHHHhCCccc----c----cccHHHHHHHhHHHHHHhcCccccceecceecccceeEEEEecc
Confidence            877754433221    1    123467788888776664  346666666666655555554443

>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]

Probab=98.88  E-value=8.4e-08  Score=86.15  Aligned_cols=148  Identities=19%  Similarity=0.229  Sum_probs=92.4

Q ss_pred             HhhhcccCCCCeEEeechhhhhh--hh-----cC-Cc---eEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHH
Q 017102          122 TQIMFETFNAPAMYVAIQAVLSL--YA-----SG-RT---TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDA  190 (377)
Q Consensus       122 ~~~lfe~~~~~~v~~~~~~~~a~--~~-----~g-~~---~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~  190 (377)
                      ..-+|+..|.....+=-++.+..  |.     .+ ..   ..+|+|||++.|.+..+.+|+++  ..+..++||+.++..
T Consensus       154 ri~a~~~AGl~~~vlDV~~fAl~ra~~~~~~~~~~~~a~~~vav~~Igat~s~l~vi~~gk~l--y~r~~~~g~~Qlt~~  231 (354)
T COG4972         154 RIDAFELAGLEPKVLDVESFALLRAYRLLASQFGPEEAAMKVAVFDIGATSSELLVIQDGKIL--YTREVPVGTDQLTQE  231 (354)
T ss_pred             HHHHHHHcCCCceEEehHHHHHHHHHHHHHHHhCCchhhhhheeeeecccceEEEEEECCeee--eEeeccCcHHHHHHH
Confidence            33455777776554444444332  21     11 12   24699999999999999999999  778999999999999


Q ss_pred             HHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCCC
Q 017102          191 LMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIG  270 (377)
Q Consensus       191 l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~  270 (377)
                      +.+..     ++    +...++++|.....- .++..+.-.                              .+       
T Consensus       232 i~r~~-----~L----~~~~a~~~k~~~~~P-~~y~~~vl~------------------------------~f-------  264 (354)
T COG4972         232 IQRAY-----SL----TEEKAEEIKRGGTLP-TDYGSEVLR------------------------------PF-------  264 (354)
T ss_pred             HHHHh-----CC----ChhHhHHHHhCCCCC-CchhHHHHH------------------------------HH-------
Confidence            88765     11    234577777665432 122211100                              00       


Q ss_pred             CCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHh
Q 017102          271 MESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIS  320 (377)
Q Consensus       271 ~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~  320 (377)
                        ...|.+-|.++|+-.-.--...-+..|+|+||++.+.|+.+.+.+.|+
T Consensus       265 --~~~l~~ei~Rslqfy~~~s~~~~id~i~LaGggA~l~gL~~~i~qrl~  312 (354)
T COG4972         265 --LGELTQEIRRSLQFYLSQSEMVDIDQILLAGGGASLEGLAAAIQQRLS  312 (354)
T ss_pred             --HHHHHHHHHHHHHHHHhccccceeeEEEEecCCcchhhHHHHHHHHhC
Confidence              001445555565432110011234679999999999999999999984

>KOG0102 consensus Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]

Probab=98.84  E-value=9.6e-08  Score=90.65  Aligned_cols=216  Identities=18%  Similarity=0.230  Sum_probs=131.1

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc-----eEEEEeCCCCceEEE--EeeCCeec-C
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTV--PIYEGYAL-P  174 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~-----~~lVVDiG~~~t~v~--pv~~g~~l-~  174 (377)
                      ...++++|.+++..+|+..-... .-++...+..+++|.+|++++|..     .-.|.|+|+++..|+  -+.+|.-. .
T Consensus       161 ~~avvtvpAyfndsqRqaTkdag-~iagl~vlrvineptaaalaygld~k~~g~iaV~dLgggtfdisilei~~gvfevk  239 (640)
T KOG0102|consen  161 KNAVITVPAYFNDSQRQATKDAG-QIAGLNVLRVINEPTAAALAYGLDKKEDGVIAVFDLGGGTFDISILEIEDGVFEVK  239 (640)
T ss_pred             hheeeccHHHHhHHHHHHhHhhh-hhccceeeccCCccchhHHhhcccccCCCceEEEEcCCceeeeeeehhccceeEEE
Confidence            46789999999999988755444 889999999999999999999863     568999999987665  56777543 3


Q ss_pred             CceEEEcccHHHHHHHHHHHHHhc---CCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccC----CCccceEEcCCC
Q 017102          175 HAILRLDLAGRDLTDALMKILTER---GYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS----SAVEKSYELPDG  247 (377)
Q Consensus       175 ~~~~~~~~GG~~l~~~l~~~l~~~---~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~----~~~~~~~~~pd~  247 (377)
                      ........||.+++..+.+++-..   +..+.-..+...+.++++.-         |..+...+    .....+|..-|.
T Consensus       240 sTngdtflggedfd~~~~~~~v~~fk~~~gidl~kd~~a~qrl~eaa---------EkaKielSs~~~tei~lp~iTada  310 (640)
T KOG0102|consen  240 STNGDTHLGGEDFDNALVRFIVSEFKKEEGIDLTKDRMALQRLREAA---------EKAKIELSSRQQTEINLPFITADA  310 (640)
T ss_pred             eccCccccChhHHHHHHHHHHHHhhhcccCcchhhhHHHHHHHHHHH---------HhhhhhhhhcccceeccceeeccC
Confidence            344567889999999998877432   11122122333344443321         00000011    112233444343


Q ss_pred             ---ceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHH-----hhhcCeEEecCCCCCCChHHHHHHHH
Q 017102          248 ---QVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRK-----DLYGNIVLSGGSTMFPGIADRMSKEI  319 (377)
Q Consensus       248 ---~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~-----~l~~nIvl~GG~s~i~g~~~rl~~el  319 (377)
                         +-+.+...|-.+.|+             +..+|.+.|.-|-.++|.     .-++-|+|+||.+++|-..+.+++-+
T Consensus       311 ~gpkh~~i~~tr~efe~~-------------v~~lI~Rti~p~~~aL~dA~~~~~di~EV~lvggmtrmpkv~s~V~e~f  377 (640)
T KOG0102|consen  311 SGPKHLNIELTRGEFEEL-------------VPSLIARTIEPCKKALRDASLSSSDINEVILVGGMTRMPKVQSTVKELF  377 (640)
T ss_pred             CCCeeEEEeecHHHHHHh-------------hHHHHHhhhhHHHHHHHhccCChhhhhhhhhhcchhhcHHHHHHHHHHh
Confidence               444555455444333             455666666655444443     44567999999999996666555333


Q ss_pred             hhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102          320 SALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       320 ~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      . .-|.       ...+|+-++-.||++-+
T Consensus       378 g-k~p~-------~~vnPdeava~GAaiqg  399 (640)
T KOG0102|consen  378 G-KGPS-------KGVNPDEAVAGGAAIQG  399 (640)
T ss_pred             C-CCCC-------CCcCCcchhccchhhcc
Confidence            2 2222       11245566666665543

>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []

Probab=98.42  E-value=7.3e-07  Score=83.14  Aligned_cols=70  Identities=19%  Similarity=0.200  Sum_probs=50.7

Q ss_pred             cCCCCeEEeechhhhhhhhc-----CCceEEEEeCCCCceEEEEeeCCeecC-CceEEEcccHHHHHHHHHHHHHh
Q 017102          128 TFNAPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALP-HAILRLDLAGRDLTDALMKILTE  197 (377)
Q Consensus       128 ~~~~~~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~v~pv~~g~~l~-~~~~~~~~GG~~l~~~l~~~l~~  197 (377)
                      .+.+..|.+.|++++|.|..     ...+.+|||||+.+|+++.|.++.... .+....++|-..+.+.+.+.|..
T Consensus       137 ~i~I~~V~V~PQ~~~A~~~~~~~~~~~~~~lVVDIGG~T~Dv~~v~~~~~~~~~~~~~~~~Gvs~~~~~I~~~l~~  212 (318)
T PF06406_consen  137 TITIKDVEVFPQSVGAVFDALMDLDEDESVLVVDIGGRTTDVAVVRGGLPDISKCSGTPEIGVSDLYDAIAQALRS  212 (318)
T ss_dssp             --EEEEEEEEESSHHHHHHHHHTS-TTSEEEEEEE-SS-EEEEEEEGGG--EEEEEEETTSSTHHHHHHHHHHTT-
T ss_pred             eEEEeeEEEEcccHHHHHHHHHhhcccCcEEEEEcCCCeEEeeeecCCccccchhccCCchhHHHHHHHHHHHHHH
Confidence            34477999999999998864     236789999999999999988765443 33345688999999999988855

They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.

>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative

Probab=98.36  E-value=2.1e-05  Score=70.74  Aligned_cols=43  Identities=30%  Similarity=0.623  Sum_probs=35.6

Q ss_pred             CeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHh
Q 017102          298 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSIL  348 (377)
Q Consensus       298 nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~  348 (377)
                      .|+++||.++.+++.+.+.+.|.        ..+..++++.+..-.||+++
T Consensus       206 ~Vvl~GGva~n~~l~~~l~~~lg--------~~v~~~~~~~~~~AlGaAl~  248 (248)
T TIGR00241       206 PIVFTGGVSKNKGLVKALEKKLG--------MKVITPPEPQIVGAVGAALL  248 (248)
T ss_pred             CEEEECccccCHHHHHHHHHHhC--------CcEEcCCCccHHHHHHHHhC
Confidence            79999999999999999998882        34555677888888998863

This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.

>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15

Probab=98.14  E-value=1.4e-05  Score=75.25  Aligned_cols=48  Identities=27%  Similarity=0.557  Sum_probs=40.7

Q ss_pred             hhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          295 LYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       295 l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +-+.|+++||.++.+|+.+.+.+.|.        .+++-|++|++....||+++|+
T Consensus       355 i~~~VvftGGva~N~gvv~ale~~Lg--------~~iivPe~pq~~GAiGAAL~A~  402 (404)
T TIGR03286       355 VREPVILVGGTSLIEGLVKALGDLLG--------IEVVVPEYSQYIGAVGAALLAS  402 (404)
T ss_pred             CCCcEEEECChhhhHHHHHHHHHHhC--------CcEEECCcccHHHHHHHHHHhc
Confidence            33569999999999999999999883        3566688999999999999984

Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.

>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional

Probab=98.10  E-value=1.8e-05  Score=75.47  Aligned_cols=163  Identities=15%  Similarity=0.168  Sum_probs=95.8

Q ss_pred             CCCCCCCCcEEEeCCCCceEEeeeCCC----CCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCC
Q 017102            1 MADTEDIQPLVCDNGTGMVKAGFAGDD----APRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG   76 (377)
Q Consensus         1 ~~~~~~~~~vvID~Gs~~~k~G~~~~~----~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g   76 (377)
                      ||+ ++-..|.||+||+||.+=|+.-.    .+....|...-.           +++++.-      .  .-..-|+...
T Consensus         1 ~~~-~~i~SVGIDIGTsTTqlvfSrl~l~n~a~~~~vpr~~I~-----------dkev~yr------S--~i~fTPl~~~   60 (475)
T PRK10719          1 MMT-EELLSVGIDIGTTTTQVIFSRLELENRASVFQVPRIEII-----------DKEIIYR------S--PIYFTPLLKQ   60 (475)
T ss_pred             CCc-cEEEEEEEeccCceEEEEEEEEEEecccccccCceEEEe-----------eeEEEEe------c--CceecCCCCC
Confidence            454 66778999999999998888422    222233322110           1111110      0  1134577777


Q ss_pred             ccCCHHHHHHHHHHhcccccccCCCC--CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEee-------ch----hhhh
Q 017102           77 IVSNWDDMEKIWHHTFYNELRVAPEE--HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVA-------IQ----AVLS  143 (377)
Q Consensus        77 ~i~~~~~~~~~~~~~~~~~L~~~~~~--~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~-------~~----~~~a  143 (377)
                      ..-|-+.++.+.+.=| +.-++.+++  ..+.++.-.....   +++.+++ +.++...=-|+       -+    ++++
T Consensus        61 ~~ID~~~i~~~V~~ey-~~Agi~~~die~~ahIITg~~~~~---~Nl~~~v-~~~~~~~gdfVVA~AG~~le~iva~~AS  135 (475)
T PRK10719         61 GEIDEAAIKELIEEEY-QKAGIAPESIDSGAVIITGETARK---ENAREVV-MALSGSAGDFVVATAGPDLESIIAGKGA  135 (475)
T ss_pred             ccccHHHHHHHHHHHH-HHcCCCHHHccccEEEEEechhHH---HHHHHHH-HHhcccccceeeeccCccHHHhhhHHHh
Confidence            7778999999999887 666766543  3344443322233   3333333 33221111111       11    3332


Q ss_pred             hh---hcC-CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHH
Q 017102          144 LY---ASG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDA  190 (377)
Q Consensus       144 ~~---~~g-~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~  190 (377)
                      +.   +-- ....++||||+++|+++.+.+|.++  +...+++||++++..
T Consensus       136 g~avLseEke~gVa~IDIGgGTT~iaVf~~G~l~--~T~~l~vGG~~IT~D  184 (475)
T PRK10719        136 GAQTLSEERNTRVLNIDIGGGTANYALFDAGKVI--DTACLNVGGRLIETD  184 (475)
T ss_pred             hHHHhhhhccCceEEEEeCCCceEEEEEECCEEE--EEEEEecccceEEEC
Confidence            22   211 2578999999999999999999998  778899999877654

>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D

Probab=98.08  E-value=3.8e-05  Score=68.51  Aligned_cols=50  Identities=20%  Similarity=0.447  Sum_probs=40.7

Q ss_pred             cCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102          297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       297 ~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      .+|+++||.++-+++.+.|+++|...   ...+.+..+++|++....||++++
T Consensus       213 ~~v~~~GGva~n~~~~~~le~~l~~~---~~~~~v~~~~~~q~~gAlGAAl~~  262 (262)
T TIGR02261       213 GTVLCTGGLALDAGLLEALKDAIQEA---KMAVAAENHPDAIYAGAIGAALWG  262 (262)
T ss_pred             CcEEEECcccccHHHHHHHHHHhccC---CcceEecCCCcchHHHHHHHHHcC
Confidence            46999999999999999999999532   124556667889999999999875

This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.

>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit

Probab=98.06  E-value=3.2e-05  Score=69.95  Aligned_cols=49  Identities=16%  Similarity=0.378  Sum_probs=40.0

Q ss_pred             hhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEE-CCCCCccccchhhHHhhc
Q 017102          294 DLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVV-APPERKYSVWIGGSILAS  350 (377)
Q Consensus       294 ~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~-~~~~~~~~~w~Gasi~a~  350 (377)
                      .+-+.|+++||.++.+|+.+.|+++|..        ++. .+++|++..-.||+++|.
T Consensus       238 ~i~~~v~~~GGva~N~~l~~al~~~Lg~--------~v~~~p~~p~~~GAlGAAL~A~  287 (293)
T TIGR03192       238 GVEEGFFITGGIAKNPGVVKRIERILGI--------KAVDTKIDSQIAGALGAALFGY  287 (293)
T ss_pred             CCCCCEEEECcccccHHHHHHHHHHhCC--------CceeCCCCccHHHHHHHHHHHH
Confidence            3446799999999999999999998842        333 356789999999999984

Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.

>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]

Probab=97.97  E-value=0.00037  Score=64.34  Aligned_cols=44  Identities=27%  Similarity=0.467  Sum_probs=39.9

Q ss_pred             eEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          299 IVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       299 Ivl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      ||++||+++..++.+.+.+.+        ..+|..||+|++.-..||+++++
T Consensus       346 iv~~GGva~n~av~~ale~~l--------g~~V~vP~~~ql~GAiGAAL~a~  389 (396)
T COG1924         346 IVLQGGVALNKAVVRALEDLL--------GRKVIVPPYAQLMGAIGAALIAK  389 (396)
T ss_pred             EEEECcchhhHHHHHHHHHHh--------CCeeecCCccchhhHHHHHHHHh
Confidence            999999999999999999888        45778899999999999999885

>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon

Probab=97.25  E-value=0.0015  Score=62.71  Aligned_cols=173  Identities=18%  Similarity=0.268  Sum_probs=106.9

Q ss_pred             CCcEEEeCCCCceEEeeeC---CC-CCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHH
Q 017102            7 IQPLVCDNGTGMVKAGFAG---DD-APRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD   82 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~---~~-~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~   82 (377)
                      ...|.||+||+||.+=|+.   ++ .+.+..|...-                 ++.+..=+.  .-..-|+.+...-|-+
T Consensus         3 i~SVGIDIGTSTTQlvfSrl~l~n~a~~~~vPri~I-----------------~dkeViYrS--~I~fTPl~~~~~ID~~   63 (473)
T PF06277_consen    3 ILSVGIDIGTSTTQLVFSRLTLENRASGFSVPRIEI-----------------VDKEVIYRS--PIYFTPLLSQTEIDAE   63 (473)
T ss_pred             eEEEEEeecCCceeEEEEEeEEEeccCCCccceEEE-----------------eccEEEecC--CccccCCCCCCccCHH
Confidence            4579999999999988885   22 23333333211                 111110000  1134578877777999


Q ss_pred             HHHHHHHHhcccccccCCCC--C-cEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEe---echhhhhhhhcCC-------
Q 017102           83 DMEKIWHHTFYNELRVAPEE--H-PILLTEAPLNPKANREKMTQIMFETFNAPAMYV---AIQAVLSLYASGR-------  149 (377)
Q Consensus        83 ~~~~~~~~~~~~~L~~~~~~--~-~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~---~~~~~~a~~~~g~-------  149 (377)
                      +++++++.=| +.-++.+++  . -|+++-... .++.-+.+.+.|-+.+|==.|.-   --+++.|..++|.       
T Consensus        64 al~~iv~~eY-~~Agi~p~~I~TGAVIITGETA-rKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~S~~~  141 (473)
T PF06277_consen   64 ALKEIVEEEY-RKAGITPEDIDTGAVIITGETA-RKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAALSKEH  141 (473)
T ss_pred             HHHHHHHHHH-HHcCCCHHHCccccEEEecchh-hhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHHhhhh
Confidence            9999999997 667776653  3 355554333 44444455555545444211111   2366677777763       


Q ss_pred             -ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHH-----------HHHHHHHHHHhcCCCc
Q 017102          150 -TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD-----------LTDALMKILTERGYSF  202 (377)
Q Consensus       150 -~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~-----------l~~~l~~~l~~~~~~~  202 (377)
                       ..-+=+|||+++|.++.+.+|.++  ...-+++||+.           +....+.++.+.+.+.
T Consensus       142 ~~~V~NiDIGGGTtN~avf~~G~v~--~T~cl~IGGRLi~~d~~g~i~yis~~~~~l~~~~~~~~  204 (473)
T PF06277_consen  142 HTVVANIDIGGGTTNIAVFDNGEVI--DTACLDIGGRLIEFDPDGRITYISPPIQRLLEELGLEL  204 (473)
T ss_pred             CCeEEEEEeCCCceeEEEEECCEEE--EEEEEeeccEEEEEcCCCcEEEECHHHHHHHHHhCCCC
Confidence             345668999999999999999999  66678999963           4455566666655543

The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.

>PRK13317 pantothenate kinase; Provisional

Probab=96.09  E-value=0.09  Score=47.90  Aligned_cols=71  Identities=21%  Similarity=0.184  Sum_probs=48.8

Q ss_pred             ChhHHHHHHHhcCCHH-HHHhhhcCeEEec-CCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          275 GIHETTYNSIMKCDVD-IRKDLYGNIVLSG-GSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       275 ~l~~~I~~~i~~~~~~-~r~~l~~nIvl~G-G~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +|..+|.+.|..+-.- .|..-.++|+++| |.++.|++.+.|.+.++-.     ..++.-+++|++...+||++++.
T Consensus       201 sl~~~v~~~I~~lA~~~ar~~~~~~Ivf~G~gla~n~~l~~~l~~~l~~~-----~~~~~~p~~~~~~gAlGAaL~a~  273 (277)
T PRK13317        201 GVIGLVGEVITTLSIQAAREKNIENIVYIGSTLTNNPLLQEIIESYTKLR-----NCTPIFLENGGYSGAIGALLLAT  273 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEECcccccCHHHHHHHHHHHhcC-----CceEEecCCCchhHHHHHHHHhh
Confidence            3444444444433211 2334448999999 7999999999999877421     24566678899999999998874

>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A

Probab=95.97  E-value=0.025  Score=53.23  Aligned_cols=52  Identities=17%  Similarity=0.286  Sum_probs=42.4

Q ss_pred             hhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102          295 LYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       295 l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      +-..|+++||.++-+++.+.|++.|....+   ..+++.|++|++..-+||+++|
T Consensus       381 i~~~VvftGGvA~N~gvv~aLe~~L~~~~~---~~~V~Vp~~pq~~GALGAAL~a  432 (432)
T TIGR02259       381 ITDQFTFTGGVAKNEAAVKELRKLIKENYG---EVQINIDPDSIYTGALGASEFA  432 (432)
T ss_pred             CCCCEEEECCccccHHHHHHHHHHHccccC---CCeEecCCCccHHHHHHHHHhC
Confidence            346899999999999999999999965432   2356668899999999999875

This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).

>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis

Probab=95.96  E-value=0.011  Score=53.88  Aligned_cols=48  Identities=25%  Similarity=0.443  Sum_probs=34.1

Q ss_pred             eEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102          299 IVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       299 Ivl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      |+++||..+-+.+.+.|++.|.+..+..   .+..+.+|.+.+..||.++|
T Consensus       224 v~l~GGv~~~~~~~~~l~~~l~~~~~~~---~~~~~~~~~~~~a~GAallA  271 (271)
T PF01869_consen  224 VVLSGGVFKNSPLVKALRDALKEKLPKV---PIIIPVEPQYDPAYGAALLA  271 (271)
T ss_dssp             EEEESGGGGCHHHHHHHGGGS-HHHHCC---TCECECCGSSHHHHHHHHHH
T ss_pred             EEEECCccCchHHHHHHHHHHHHhcCCC---ceEECCCCCccHHHHHHHhC
Confidence            9999999988777777765555544432   23344567899999999886

The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.

>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]

Probab=95.78  E-value=0.02  Score=50.93  Aligned_cols=95  Identities=21%  Similarity=0.271  Sum_probs=65.2

Q ss_pred             CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc-----eEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102          114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~-----~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~  188 (377)
                      .+..-+.+++.+-++++++.-.---++-||..++-.+     --.|+|+|+++|+.+-+-....+  ....+-=.|+.++
T Consensus        93 ~~l~M~~iA~~l~~~lgv~V~igGvEAemAi~GALTTPGt~~PlaIlDmG~GSTDAsii~~~g~v--~~iHlAGAG~mVT  170 (332)
T PF08841_consen   93 DKLQMQMIADELEEELGVPVEIGGVEAEMAILGALTTPGTDKPLAILDMGGGSTDASIINRDGEV--TAIHLAGAGNMVT  170 (332)
T ss_dssp             SS-TCHHHHHHHHHHHTSEEEEECEHHHHHHHHHTTSTT--SSEEEEEE-SSEEEEEEE-TTS-E--EEEEEE-SHHHHH
T ss_pred             ccccHHHHHHHHHHHHCCceEEccccHHHHHhcccCCCCCCCCeEEEecCCCcccHHHhCCCCcE--EEEEecCCchhhH
Confidence            4445567788888889999888888999988876432     34788999999999888655444  3344555789999


Q ss_pred             HHHHHHHHhcCCCccChhHHHHHHHHhHhc
Q 017102          189 DALMKILTERGYSFTTTAEREIVRDMKEKL  218 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~  218 (377)
                      -.+..-|   |.     .+.+++|++|+.-
T Consensus       171 mlI~sEL---Gl-----~d~~lAE~IKkyP  192 (332)
T PF08841_consen  171 MLINSEL---GL-----EDRELAEDIKKYP  192 (332)
T ss_dssp             HHHHHHC---T------S-HHHHHHHHHS-
T ss_pred             HHHHHhh---CC-----CCHHHHHHhhhcc
Confidence            8887766   22     2678899998743

This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.

>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional

Probab=95.59  E-value=0.088  Score=52.30  Aligned_cols=79  Identities=18%  Similarity=0.191  Sum_probs=51.8

Q ss_pred             CCCCCHHHHHHHHhhhcccCCCC--eEEeechhhhhhhhc-----CCceEEEEeCCCCceEEEEeeCCeecCCceEEEcc
Q 017102          110 APLNPKANREKMTQIMFETFNAP--AMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL  182 (377)
Q Consensus       110 p~~~~~~~~~~l~~~lfe~~~~~--~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~  182 (377)
                      ...-.-..++.+++.+.+..|++  .+.=-.++.++.++.     ...+++|+|||+++|.++.+-+|.+.  ...++|+
T Consensus        85 sAvReA~N~~~fl~~i~~~tGl~ievIsG~eEA~l~~~gv~~~l~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~l  162 (496)
T PRK11031         85 ATLRLAVNADEFLAKAQEILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQAT--SLFSLSM  162 (496)
T ss_pred             HHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHhhhhccCCCCCEEEEEecCCeeeEEEecCCcee--eeeEEec
Confidence            33434455666777776777765  222233333333221     12358999999999999999888877  6678999


Q ss_pred             cHHHHHHH
Q 017102          183 AGRDLTDA  190 (377)
Q Consensus       183 GG~~l~~~  190 (377)
                      |.-.+++.
T Consensus       163 G~vrl~e~  170 (496)
T PRK11031        163 GCVTWLER  170 (496)
T ss_pred             cchHHHHH
Confidence            98776544

>TIGR03706 exo_poly_only exopolyphosphatase

Probab=95.19  E-value=0.071  Score=49.32  Aligned_cols=79  Identities=20%  Similarity=0.169  Sum_probs=51.9

Q ss_pred             CCCCCHHHHHHHHhhhcccCCCCeEEeec---hhhhhhhhc----CCceEEEEeCCCCceEEEEeeCCeecCCceEEEcc
Q 017102          110 APLNPKANREKMTQIMFETFNAPAMYVAI---QAVLSLYAS----GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL  182 (377)
Q Consensus       110 p~~~~~~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~~----g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~  182 (377)
                      ..+-.-..++.+++.+.+..|++ +.++.   ++.+...+.    ...+++|+|+|+++|.++.+.++.+.  ...++|+
T Consensus        79 sa~R~A~N~~~~~~~i~~~tgi~-i~visg~eEa~l~~~gv~~~~~~~~~~v~DiGGGSte~~~~~~~~~~--~~~Sl~l  155 (300)
T TIGR03706        79 AALRDAKNGPEFLREAEAILGLP-IEVISGEEEARLIYLGVAHTLPIADGLVVDIGGGSTELILGKDFEPG--EGVSLPL  155 (300)
T ss_pred             HHHHcCCCHHHHHHHHHHHHCCC-eEEeChHHHHHHHHHHHHhCCCCCCcEEEEecCCeEEEEEecCCCEe--EEEEEcc
Confidence            33334455666777776666654 23444   333322221    22457999999999999999888877  6678999


Q ss_pred             cHHHHHHHH
Q 017102          183 AGRDLTDAL  191 (377)
Q Consensus       183 GG~~l~~~l  191 (377)
                      |.-.+++.+
T Consensus       156 G~vrl~e~f  164 (300)
T TIGR03706       156 GCVRLTEQF  164 (300)
T ss_pred             ceEEhHHhh
Confidence            987777664

It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.

>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type

Probab=94.97  E-value=0.24  Score=44.96  Aligned_cols=68  Identities=16%  Similarity=0.013  Sum_probs=44.2

Q ss_pred             ChhHHHHHHHhcCCH-HHHHhhhcCeEEecC-CCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHH
Q 017102          275 GIHETTYNSIMKCDV-DIRKDLYGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSI  347 (377)
Q Consensus       275 ~l~~~I~~~i~~~~~-~~r~~l~~nIvl~GG-~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi  347 (377)
                      +|..+|.+.|..+.. .-+..-.++|+++|| .+..|.+.+++..-+.- .    ..++.-+.+..+....||.+
T Consensus       209 SLl~mV~~nIg~lA~~~a~~~~~~~IvF~Gg~L~~~~~l~~~~~~~~~~-~----~~~~ifp~h~~y~gAlGAaL  278 (279)
T TIGR00555       209 SLLGLIGNNIGQIAYLCALRYNIDRIVFIGSFLRNNQLLMKVLSYATNF-W----SKKALFLEHEGYSGAIGALL  278 (279)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCeEEEECCcccCCHHHHHHHHHHHhh-c----CceEEEECCcchHHHhhhcc
Confidence            455555555544321 124455789999999 78889899888876642 1    24555566667777777764

This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).

>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]

Probab=94.08  E-value=0.1  Score=51.38  Aligned_cols=74  Identities=19%  Similarity=0.192  Sum_probs=47.2

Q ss_pred             HHHHHHHhhhcccCCCC--eEEeechhhhhhhhc----C-CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102          116 ANREKMTQIMFETFNAP--AMYVAIQAVLSLYAS----G-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       116 ~~~~~l~~~lfe~~~~~--~v~~~~~~~~a~~~~----g-~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~  188 (377)
                      .....+.+.+-+.+|++  .+.=-.++-.+.++.    + ...++|+|+|+++|.++-+-+..+.  ...++|+|.-.++
T Consensus        88 ~N~~eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~~~~~~lv~DIGGGStEl~~g~~~~~~--~~~Sl~~G~v~lt  165 (492)
T COG0248          88 PNGDEFLARVEKELGLPIEVISGEEEARLIYLGVASTLPRKGDGLVIDIGGGSTELVLGDNFEIG--LLISLPLGCVRLT  165 (492)
T ss_pred             CCHHHHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCCCCCCEEEEEecCCeEEEEEecCCccc--eeEEeecceEEee
Confidence            33444555555566665  223333444444432    3 5689999999999999988877766  6677888865544


Q ss_pred             HHH
Q 017102          189 DAL  191 (377)
Q Consensus       189 ~~l  191 (377)
                      +.+
T Consensus       166 ~~~  168 (492)
T COG0248         166 ERF  168 (492)
T ss_pred             hhh
Confidence            443

>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase)

Probab=94.07  E-value=2.2  Score=39.70  Aligned_cols=52  Identities=17%  Similarity=0.171  Sum_probs=38.4

Q ss_pred             HHhhhcccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102          121 MTQIMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~  174 (377)
                      +.+.+-+.+++| |++.++.-+++++.       +..+.++|.+|.+- -...|.+|+++.
T Consensus        89 l~~~l~~~~~~p-v~v~NDa~~~alaE~~~g~~~~~~~~~~v~igtGi-G~giv~~G~~~~  147 (318)
T TIGR00744        89 LKEKVEARVGLP-VVVENDANAAALGEYKKGAGKGARDVICITLGTGL-GGGIIINGEIRH  147 (318)
T ss_pred             HHHHHHHHHCCC-EEEechHHHHHHHHHHhcccCCCCcEEEEEeCCcc-EEEEEECCEEee
Confidence            444554667887 77899888887732       45789999999874 677788998764

This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.

>PRK10854 exopolyphosphatase; Provisional

Probab=94.00  E-value=0.14  Score=51.16  Aligned_cols=78  Identities=13%  Similarity=0.086  Sum_probs=49.0

Q ss_pred             CCCCCHHHHHHHHhhhcccCCCCe--EEeechhhhhhhhcC-----CceEEEEeCCCCceEEEEeeCCeecCCceEEEcc
Q 017102          110 APLNPKANREKMTQIMFETFNAPA--MYVAIQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL  182 (377)
Q Consensus       110 p~~~~~~~~~~l~~~lfe~~~~~~--v~~~~~~~~a~~~~g-----~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~  182 (377)
                      ...-....+..+++.+.+..|++-  +.=-.++.+..++.-     ..+++|||||+++|.++.+-+|.+.  ...+.++
T Consensus        90 sAlReA~N~~~fl~~i~~~tGl~i~vIsG~EEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~S~~l  167 (513)
T PRK10854         90 HTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRM  167 (513)
T ss_pred             HHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHhhhhcccCCCCCeEEEEeCCCeEEEEEecCCCee--EeEEEec
Confidence            333344556667777767777652  222223333322211     2458999999999999999988766  4556688


Q ss_pred             cHHHHHH
Q 017102          183 AGRDLTD  189 (377)
Q Consensus       183 GG~~l~~  189 (377)
                      |.-.+++
T Consensus       168 G~vrl~e  174 (513)
T PRK10854        168 GCVSFAQ  174 (513)
T ss_pred             ceeeHHh
Confidence            8765555

>PRK03011 butyrate kinase; Provisional

Probab=93.76  E-value=5.8  Score=37.65  Aligned_cols=46  Identities=22%  Similarity=0.320  Sum_probs=31.8

Q ss_pred             cCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhH
Q 017102          297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGS  346 (377)
Q Consensus       297 ~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gas  346 (377)
                      +-|||+||.+.-+-|.+++++.+..+.    ++.+....+-..+.-.||.
T Consensus       297 D~IVlgGGI~~~~~l~~~I~~~l~~~~----pv~i~p~~~e~~A~a~GA~  342 (358)
T PRK03011        297 DAIVLTGGLAYSKRLVERIKERVSFIA----PVIVYPGEDEMEALAEGAL  342 (358)
T ss_pred             CEEEEeCccccCHHHHHHHHHHHHhhC----CeEEEeCCCHHHHHHHHHH
Confidence            569999999987777788888777653    4566655544445555553

>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T

Probab=93.66  E-value=0.31  Score=38.34  Aligned_cols=58  Identities=19%  Similarity=0.265  Sum_probs=41.1

Q ss_pred             EEEeCCCCceEEEEeeCCeecCCceEEEccc--------HHHHH--HHHHHHHHhcCCCccChhHHHHHHHH-hHhccee
Q 017102          153 IVLDSGDGVSHTVPIYEGYALPHAILRLDLA--------GRDLT--DALMKILTERGYSFTTTAEREIVRDM-KEKLAYI  221 (377)
Q Consensus       153 lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~G--------G~~l~--~~l~~~l~~~~~~~~~~~~~~~~~~i-k~~~~~v  221 (377)
                      ++||+|++.|.++....+...  ....+++|        |.+++  +.+.+.++.         ..+.+|++ |.++..+
T Consensus         2 ~~iDiGs~~~~~~i~~~~~~~--~~~vl~~g~~~s~gi~~g~Itd~~~i~~~i~~---------a~~~AE~~~k~~i~~v   70 (120)
T PF14450_consen    2 VVIDIGSSKTKVAIAEDGSDG--YIRVLGVGEVPSKGIKGGHITDIEDISKAIKI---------AIEEAERLAKCEIGSV   70 (120)
T ss_dssp             EEEEE-SSSEEEEEEETTEEE--EEEEES----------HHHHH--HHHHHHHT-----------HHHHHHH-HHHH--S
T ss_pred             EEEEcCCCcEEEEEEEeCCCC--cEEEEEEecccccccCCCEEEEHHHHHHHHHH---------HHHHHHHHhCCeeeEE
Confidence            689999999999999888776  57788999        99999  888877732         34557777 7666543

>PRK09557 fructokinase; Reviewed

Probab=92.86  E-value=3.9  Score=37.68  Aligned_cols=52  Identities=13%  Similarity=0.013  Sum_probs=35.5

Q ss_pred             HhhhcccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecCC
Q 017102          122 TQIMFETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH  175 (377)
Q Consensus       122 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~~  175 (377)
                      .+.+-+.+++| |.+.++.-|++++.       +..+.+.+.+|. .+-...|.+|.++..
T Consensus        89 ~~~l~~~~~~p-v~~~NDa~aaA~aE~~~g~~~~~~~~~~l~igt-GiG~giv~~G~l~~G  147 (301)
T PRK09557         89 DKDLSARLNRE-VRLANDANCLAVSEAVDGAAAGKQTVFAVIIGT-GCGAGVAINGRVHIG  147 (301)
T ss_pred             HHHHHHHHCCC-EEEccchhHHHHHHHHhcccCCCCcEEEEEEcc-ceEEEEEECCEEEec
Confidence            33444556887 77889888887653       235677888874 466777789987643

>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3

Probab=91.95  E-value=0.15  Score=46.81  Aligned_cols=29  Identities=24%  Similarity=0.313  Sum_probs=22.0

Q ss_pred             hcCCceEEEEeCCCCceEEEEeeCCeecC
Q 017102          146 ASGRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       146 ~~g~~~~lVVDiG~~~t~v~pv~~g~~l~  174 (377)
                      ..+..+++++|+|+++|+|++|.||.+..
T Consensus        73 ~~g~~~~i~vDmGGTTtDi~~i~~G~p~~  101 (290)
T PF01968_consen   73 LTGLENAIVVDMGGTTTDIALIKDGRPEI  101 (290)
T ss_dssp             -HT-SSEEEEEE-SS-EEEEEEETTEE--
T ss_pred             cCCCCCEEEEeCCCCEEEEEEEECCeeec
Confidence            55888999999999999999999999863

5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.

>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3

Probab=91.53  E-value=0.38  Score=44.08  Aligned_cols=75  Identities=19%  Similarity=0.240  Sum_probs=50.0

Q ss_pred             CHHHHHHHHhhhcccCCCCeEEeec---hhhhhh----hhc-CCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHH
Q 017102          114 PKANREKMTQIMFETFNAPAMYVAI---QAVLSL----YAS-GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR  185 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~----~~~-g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~  185 (377)
                      .-..+..+++.+.+..|++- .+++   ++.++.    .+. ...+++|+|+|+++|.++.+.+|.+.  ...++|+|.-
T Consensus        69 ~A~N~~~~~~~i~~~tGi~i-~iIsgeeEa~l~~~gv~~~l~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~v  145 (285)
T PF02541_consen   69 EAKNSDEFLDRIKKETGIDI-EIISGEEEARLSFLGVLSSLPPDKNGLVIDIGGGSTELILFENGKVV--FSQSLPLGAV  145 (285)
T ss_dssp             HSTTHHHHHHHHHHHHSS-E-EEE-HHHHHHHHHHHHHHHSTTTSSEEEEEEESSEEEEEEEETTEEE--EEEEES--HH
T ss_pred             hCcCHHHHHHHHHHHhCCce-EEecHHHHHHHHHHHHHhhccccCCEEEEEECCCceEEEEEECCeee--EeeeeehHHH
Confidence            33455666777767777653 2333   222222    223 56889999999999999999999988  7788999987


Q ss_pred             HHHHHH
Q 017102          186 DLTDAL  191 (377)
Q Consensus       186 ~l~~~l  191 (377)
                      .+.+.+
T Consensus       146 rl~e~~  151 (285)
T PF02541_consen  146 RLTERF  151 (285)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            776665

6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.

>COG2441 Predicted butyrate kinase [Energy production and conversion]

Probab=91.14  E-value=0.32  Score=43.36  Aligned_cols=73  Identities=14%  Similarity=0.196  Sum_probs=44.2

Q ss_pred             hhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCC---CceEEEECCCCCccccchhhHHhhcc
Q 017102          276 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS---SMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       276 l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~---~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.+.+.+.+...-.+.++   .-|.++|-.++||-|-.-+++.|+..+..   ...++.....-..-.+..||+++|+-
T Consensus       257 l~e~vvK~v~tllps~~p---d~iylSGrf~~~~~~~~dv~~~l~d~~s~~g~~~evr~le~~~K~KeaA~GaAiiAna  332 (374)
T COG2441         257 LIEGVVKDVFTLLPSTYP---DAIYLSGRFSRIPRFFSDVKEKLRDAFSSYGFGIEVRKLESRAKAKEAAEGAAIIANA  332 (374)
T ss_pred             HHHHHHHHHHHhccccCc---ceEEEeeecccccchhhHHHHHHHHHHhhcCccceeehhhhhhhhhhhccchhhhhhh
Confidence            556666666555333333   24999999999998877777777654432   11233332222234477888888864

>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length

Probab=91.08  E-value=1.1  Score=41.73  Aligned_cols=49  Identities=22%  Similarity=0.370  Sum_probs=36.9

Q ss_pred             CeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCC---CCccccchhhHHhhc
Q 017102          298 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP---ERKYSVWIGGSILAS  350 (377)
Q Consensus       298 nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~---~~~~~~w~Gasi~a~  350 (377)
                      -|+|+|-.+.++.|.+.+...|...++-    ++....   -..-.+-.|++++|+
T Consensus       263 ~IilSGr~~~~~~~~~~l~~~l~~~~~~----~v~~l~~~~~~aKeaA~GaAiIA~  314 (343)
T PF07318_consen  263 EIILSGRFSRIPEFRKKLEDRLEDYFPV----KVRKLEGLARKAKEAAQGAAIIAN  314 (343)
T ss_pred             EEEEeccccccHHHHHHHHHHHHhhccc----ceeecccccccchhhhhhHHHHhh
Confidence            4999999999999999999999988762    222211   112448899999987

The function of this family is unknown.

>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]

Probab=90.46  E-value=3.3  Score=38.19  Aligned_cols=156  Identities=17%  Similarity=0.218  Sum_probs=82.8

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCC---------CCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeecccc
Q 017102            4 TEDIQPLVCDNGTGMVKAGFAGDD---------APRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIE   74 (377)
Q Consensus         4 ~~~~~~vvID~Gs~~~k~G~~~~~---------~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~   74 (377)
                      ++....|.||+||++|.+=|+.-+         .|++.|-.     ++           .       . +...-+..|+.
T Consensus         2 te~ilSVGIDiGTsTTQvifS~lel~Nmas~~~VPri~ii~-----kd-----------i-------~-~rS~i~FTPv~   57 (473)
T COG4819           2 TEQILSVGIDIGTSTTQVIFSKLELVNMASVSQVPRIEIIK-----KD-----------I-------S-WRSPIFFTPVD   57 (473)
T ss_pred             cceeeeeeeeccCceeeeeeeeeEEeecccccccceEEEEe-----cc-----------e-------e-eecceeeeeec
Confidence            567788999999999999887532         23222110     00           0       0 00011334554


Q ss_pred             CCccCCHHHHHHHHHHhcccccccCCCC---CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEe---echhhhhhhhcC
Q 017102           75 HGIVSNWDDMEKIWHHTFYNELRVAPEE---HPILLTEAPLNPKANREKMTQIMFETFNAPAMYV---AIQAVLSLYASG  148 (377)
Q Consensus        75 ~g~i~~~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~---~~~~~~a~~~~g  148 (377)
                      ..--.|.++++.+...=| ..-++.++.   -.|+++-...-.+.-|.. +..+-..+|-=.|.-   --+++.|--++|
T Consensus        58 ~q~~id~~alk~~v~eeY-~~AGi~pesi~sGAvIITGEtArk~NA~~v-l~alSg~aGDFVVAtAGPdLESiIAGkGaG  135 (473)
T COG4819          58 KQGGIDEAALKKLVLEEY-QAAGIAPESIDSGAVIITGETARKRNARPV-LMALSGSAGDFVVATAGPDLESIIAGKGAG  135 (473)
T ss_pred             ccCCccHHHHHHHHHHHH-HHcCCChhccccccEEEeccccccccchHH-HHHhhhcccceEEEecCCCHHHHhccCCcc
Confidence            444446677887776665 455665543   346666443332222222 222222232111111   113333333333


Q ss_pred             C------ceE--EEEeCCCCceEEEEeeCCeecCCceEEEcccHHHH
Q 017102          149 R------TTG--IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL  187 (377)
Q Consensus       149 ~------~~~--lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l  187 (377)
                      .      .++  +=+|||+++|..+-+-.|++.  ...-+++||+.+
T Consensus       136 A~t~Seqr~t~v~NlDIGGGTtN~slFD~Gkv~--dTaCLdiGGRLi  180 (473)
T COG4819         136 AQTLSEQRLTRVLNLDIGGGTTNYSLFDAGKVS--DTACLDIGGRLI  180 (473)
T ss_pred             ccchhhhhceEEEEEeccCCccceeeecccccc--cceeeecCcEEE
Confidence            2      233  447999999999999889888  444568888644

>PRK13321 pantothenate kinase; Reviewed

Probab=88.64  E-value=1.6  Score=39.35  Aligned_cols=19  Identities=32%  Similarity=0.407  Sum_probs=16.4

Q ss_pred             cEEEeCCCCceEEeeeCCC
Q 017102            9 PLVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~   27 (377)
                      .+.||+|.+++|+|+..++
T Consensus         2 iL~IDIGnT~ik~gl~~~~   20 (256)
T PRK13321          2 LLLIDVGNTNIKLGVFDGD   20 (256)
T ss_pred             EEEEEECCCeEEEEEEECC
Confidence            4789999999999998654

>PRK13324 pantothenate kinase; Reviewed

Probab=88.38  E-value=4.7  Score=36.32  Aligned_cols=19  Identities=32%  Similarity=0.441  Sum_probs=16.1

Q ss_pred             cEEEeCCCCceEEeeeCCC
Q 017102            9 PLVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~   27 (377)
                      .+.||+|-+++|.|+..++
T Consensus         2 iL~iDiGNT~ik~gl~~~~   20 (258)
T PRK13324          2 LLVMDMGNSHIHIGVFDGD   20 (258)
T ss_pred             EEEEEeCCCceEEEEEECC
Confidence            4789999999999988643

>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein

Probab=88.38  E-value=0.48  Score=43.94  Aligned_cols=30  Identities=20%  Similarity=0.351  Sum_probs=26.1

Q ss_pred             hhcCCceEEEEeCCCCceEEEEeeCCeecC
Q 017102          145 YASGRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       145 ~~~g~~~~lVVDiG~~~t~v~pv~~g~~l~  174 (377)
                      ++....+++.+|+|+++|+|+||.+|.+..
T Consensus       123 la~~~~~~I~~DmGGTTtDi~~i~~G~p~~  152 (318)
T TIGR03123       123 IAKRIPECLFVDMGSTTTDIIPIIDGEVAA  152 (318)
T ss_pred             HHhcCCCEEEEEcCccceeeEEecCCEeee
Confidence            334578999999999999999999999884

This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.

>TIGR02707 butyr_kinase butyrate kinase

Probab=88.00  E-value=23  Score=33.54  Aligned_cols=27  Identities=30%  Similarity=0.388  Sum_probs=21.3

Q ss_pred             cCeEEecCCCCCCChHHHHHHHHhhhC
Q 017102          297 GNIVLSGGSTMFPGIADRMSKEISALA  323 (377)
Q Consensus       297 ~nIvl~GG~s~i~g~~~rl~~el~~~~  323 (377)
                      +-|||+||.+.-+-+.+++++.+..+.
T Consensus       295 D~IV~gGGI~e~~~l~~~I~~~l~~~a  321 (351)
T TIGR02707       295 DAIVLTGGLAYSKYFVSEIIKRVSFIA  321 (351)
T ss_pred             CEEEEcchhhcCHHHHHHHHHHHHhhC
Confidence            569999999987777777777777664

This model represents an enzyme family in which members are designated either butryate kinase or branched-chain carboxylic acid kinase. The EC designation 2.7.2.7 describes an enzyme with relatively broad specificity; gene products whose context suggests a role in metabolism of aliphatic amino acids are likely to act as branched-chain carboxylic acid kinase. The gene typically found adjacent, ptb (phosphate butyryltransferase), likewise encodes an enzyme that may have a broad specificity that includes a role in aliphatic amino acid cabolism.

>PF03309 Pan_kinase: Type III pantothenate kinase; InterPro: IPR004619 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway

Probab=87.95  E-value=4.3  Score=35.22  Aligned_cols=19  Identities=26%  Similarity=0.323  Sum_probs=15.6

Q ss_pred             EEEeCCCCceEEeeeCCCC
Q 017102           10 LVCDNGTGMVKAGFAGDDA   28 (377)
Q Consensus        10 vvID~Gs~~~k~G~~~~~~   28 (377)
                      ++||+|-+++|+|+..++.
T Consensus         2 L~iDiGNT~ik~~~~~~~~   20 (206)
T PF03309_consen    2 LLIDIGNTRIKWALFDGDK   20 (206)
T ss_dssp             EEEEE-SSEEEEEEEETTE
T ss_pred             EEEEECCCeEEEEEEECCE
Confidence            7899999999999987653

CoA is a ubiquitous and essential cofactor in all living organsims. Pantothenate kinase catalyses the first and rate limiting step in the CoA biosynthetic pathway, which involves transferring a phosphoryl group from ATP to pantothenate, also known as vitamin B5. Three distinct types of pantothenate kinase enzymes have been identified: type I PanK enzymes are typified by the E. coli CoaA protein, type II enzymes are primarily found in eukaryotic organisms whilst type III enzymes have a wider phylogenic distribution and are not feedback inhibited by CoA []. This entry represents the type III pantothenate kinase family, such as that found in Helicobacter pylori. PanK III enzymes have a much wider phylogenic distribution than PanK I, and differs significantly in biochemical activity. PanK III enzymes are are not feedback inhibited by CoA concentration (which is also the case for PanK II enzymes), and PanK III enzymes have an unusually high Km for ATP []. ; GO: 0045893 positive regulation of transcription, DNA-dependent; PDB: 2GTD_E 3BF1_F 3BEX_D 3BF3_F 2NRH_B 2H3G_X 3DJC_J 2F9T_A 2F9W_A.

>COG1521 Pantothenate kinase type III (Bvg accessory factor family protein) [Transcription]

Probab=87.71  E-value=7.9  Score=34.63  Aligned_cols=18  Identities=17%  Similarity=0.137  Sum_probs=15.9

Q ss_pred             cEEEeCCCCceEEeeeCC
Q 017102            9 PLVCDNGTGMVKAGFAGD   26 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~   26 (377)
                      -++||+|.++++.|...+
T Consensus         2 ~L~iDiGNT~~~~a~~~~   19 (251)
T COG1521           2 LLLIDIGNTRIVFALYEG   19 (251)
T ss_pred             eEEEEeCCCeEEEEEecC
Confidence            479999999999998874

>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]

Probab=84.66  E-value=0.66  Score=41.04  Aligned_cols=23  Identities=26%  Similarity=0.575  Sum_probs=21.3

Q ss_pred             CceEEEEeCCCCceEEEEeeCCe
Q 017102          149 RTTGIVLDSGDGVSHTVPIYEGY  171 (377)
Q Consensus       149 ~~~~lVVDiG~~~t~v~pv~~g~  171 (377)
                      ..+|+.||+|+++|+|+||.+|.
T Consensus       129 ~dsci~VD~GSTTtDIIPi~~ge  151 (330)
T COG1548         129 KDSCILVDMGSTTTDIIPIKDGE  151 (330)
T ss_pred             CCceEEEecCCcccceEeecchh
Confidence            46799999999999999999996

>TIGR00671 baf pantothenate kinase, type III

Probab=83.34  E-value=15  Score=32.81  Aligned_cols=18  Identities=17%  Similarity=0.289  Sum_probs=15.7

Q ss_pred             EEEeCCCCceEEeeeCCC
Q 017102           10 LVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus        10 vvID~Gs~~~k~G~~~~~   27 (377)
                      ++||+|-+++|+|+..++
T Consensus         2 L~iDiGNT~i~~g~~~~~   19 (243)
T TIGR00671         2 LLIDVGNTRIVFALNSGN   19 (243)
T ss_pred             EEEEECCCcEEEEEEECC
Confidence            689999999999988654

This model describes a family of proteins found in a single copy in at least ten different early completed bacterial genomes. The only characterized member of the family is Bvg accessory factor (Baf), a protein required, in addition to the regulatory operon bvgAS, for heterologous transcription of the Bordetella pertussis toxin operon (ptx) in E. coli.

>PRK13318 pantothenate kinase; Reviewed

Probab=81.75  E-value=24  Score=31.70  Aligned_cols=18  Identities=22%  Similarity=0.163  Sum_probs=15.8

Q ss_pred             cEEEeCCCCceEEeeeCC
Q 017102            9 PLVCDNGTGMVKAGFAGD   26 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~   26 (377)
                      .+.||+|.+++|+|+..+
T Consensus         2 iL~IDIGnT~iK~al~d~   19 (258)
T PRK13318          2 LLAIDVGNTNTVFGLYEG   19 (258)
T ss_pred             EEEEEECCCcEEEEEEEC
Confidence            478999999999998863

>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]

Probab=80.45  E-value=3.1  Score=36.23  Aligned_cols=53  Identities=19%  Similarity=0.167  Sum_probs=34.9

Q ss_pred             hcCCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcC
Q 017102          146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG  199 (377)
Q Consensus       146 ~~g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~  199 (377)
                      -+|..+..|+-+.++.|.|+.+.+.+--- ...++++.=-.+...+.+.|.-.+
T Consensus       120 iTgA~nPvvLYvSGGNTQvIAYse~rYrI-FGETlDIAvGNClDRFAR~lklsN  172 (336)
T KOG2708|consen  120 ITGAQNPVVLYVSGGNTQVIAYSEKRYRI-FGETLDIAVGNCLDRFARVLKLSN  172 (336)
T ss_pred             eccCCCCEEEEEeCCceEEEEEccceeee-ecceehhhhhhhHHHHHHHhcCCC
Confidence            34567889999999999999998874321 224555553355556666665443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	377
1nlv_A	375	Crystal Structure Of Dictyostelium Discoideum Actin		0.0
3chw_A	375	Complex Of Dictyostelium Discoideum Actin With Prof		0.0
3ci5_A	375	Complex Of Phosphorylated Dictyostelium Discoideum		0.0
1dej_A	375	Crystal Structure Of A DictyosteliumTETRAHYMENA CHI		0.0
4efh_A	375	Acanthamoeba Actin Complex With Spir Domain D Lengt		0.0
1c0g_A	375	Crystal Structure Of 1:1 Complex Between Gelsolin S		0.0
3a5l_C	375	Crystal Structure Of A Dictyostelium P109a Mg2+-Act		0.0
3a5m_C	375	Crystal Structure Of A Dictyostelium P109i Mg2+-Act		0.0
3byh_A	374	Model Of Actin-Fimbrin Abd2 Complex Length = 374		0.0
2oan_A	375	Structure Of Oxidized Beta-Actin Length = 375		0.0
3u4l_A	375	Cryocooled Bovine Profilin:actin Crystal Structure		0.0
1d4x_A	375	Crystal Structure Of Caenorhabditis Elegans Mg-Atp		0.0
1ijj_A	377	The X-Ray Crystal Structure Of The Complex Between		0.0
2btf_A	375	The Structure Of Crystalline Profilin-Beta-Actin Le		0.0
2hf3_A	374	Crystal Structure Of Monomeric Actin In The Adp Bou		0.0
3eks_A	375	Crystal Structure Of Monomeric Actin Bound To Cytoc		0.0
1kxp_A	375	Crystal Structure Of Human Vitamin D-binding Protei		0.0
4b1v_A	376	Structure Of The Phactr1 Rpel-N Domain Bound To G-A		0.0
1eqy_A	377	Complex Between Rabbit Muscle Alpha-Actin: Human Ge		0.0
1t44_A	370	Structural Basis Of Actin Sequestration By Thymosin		0.0
3g37_O	376	Cryo-Em Structure Of Actin Filament In The Presence		0.0
1qz5_A	375	Structure Of Rabbit Actin In Complex With Kabiramid		0.0
1c0f_A	368	Crystal Structure Of Dictyostelium Caatp-Actin In C		0.0
2gwj_A	371	Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form		0.0
3w3d_A	374	Crystal Structure Of Smooth Muscle G Actin Dnase I		0.0
1lcu_A	371	Polylysine Induces An Antiparallel Actin Dimer That		0.0
2w49_D	372	Isometrically Contracting Insect Asynchronous Fligh		0.0
3m6g_A	371	Crystal Structure Of Actin In Complex With Lobophor		0.0
1atn_A	373	Atomic Structure Of The Actin:dnase I Complex Lengt		0.0
3b63_L	365	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_E	365	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_B	364	Actin Filament Model In The Extended Form Of Acroms		0.0
1yag_A	375	Structure Of The Yeast Actin-human Gelsolin Segment		0.0
1yvn_A	375	The Yeast Actin Val 159 Asn Mutant Complex With Hum		0.0
3b63_D	357	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_C	365	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_F	357	Actin Filament Model In The Extended Form Of Acroms		0.0
3b63_A	365	Actin Filament Model In The Extended Form Of Acroms		0.0
3mn5_A	359	Structures Of Actin-Bound Wh2 Domains Of Spire And		0.0
2p9k_B	394	Crystal Structure Of Bovine Arp23 COMPLEX CO-Crysta		1e-103
1k8k_B	394	Crystal Structure Of Arp23 COMPLEX Length = 394		1e-103
1k8k_A	418	Crystal Structure Of Arp23 COMPLEX Length = 418		3e-62
3dwl_A	427	Crystal Structure Of Fission Yeast Arp2/3 Complex L		2e-60
3qb0_A	498	Crystal Structure Of Actin-Related Protein Arp4 Fro		4e-20
4i6m_A	477	Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex		8e-14
4fo0_A	593	Human Actin-Related Protein Arp8 In Its Atp-Bound S		8e-07
4i6m_B	439	Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex		1e-05

>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin Complexed With Ca Atp And Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/375 (90%), Positives = 363/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+EQE+ TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin And The Last Poly-Pro Of Human Vasp Length = 375

Iteration: 1
 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/375 (90%), Positives = 362/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin With Gelsolin Length = 375

Iteration: 1
 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/375 (89%), Positives = 361/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+ VGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSXVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/375 (89%), Positives = 360/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++  K SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYKESSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKH 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D Length = 375

Iteration: 1
 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/373 (90%), Positives = 359/373 (96%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +++Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DEVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SSA+EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSSALEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFR PE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLSGG
Sbjct: 243 PDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TMFPGIADRM KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment 1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT 228: Q228kT229AA230YE360H) Length = 375

Iteration: 1
 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/375 (89%), Positives = 360/375 (96%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++   +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKH 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  715 bits (1846), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/375 (89%), Positives = 358/375 (95%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEA LNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAALNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTA   IVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/375 (89%), Positives = 358/375 (95%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEA LNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAILNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 121 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTA   IVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 181 AGRDLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 241 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 301 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375

>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex Length = 374

Iteration: 1
 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/373 (89%), Positives = 355/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 2   DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 61
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 62  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 121
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 122 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 181
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 182 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 241
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS +GMES GIHETT+NSIMKCDVDIRKDLY N VLSGG
Sbjct: 242 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGG 301
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 302 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 361
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 362 DESGPSIVHRKCF 374

>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin Length = 375

Iteration: 1
 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/373 (89%), Positives = 355/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS +GMES GIHETT+NSIMKCDVDIRKDLY N VLSGG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESXGIHETTFNSIMKCDVDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4 A Length = 375

Iteration: 1
 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/373 (89%), Positives = 355/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS +GMES GIHETT+NSIMKCDVDIRKDLY N VLSGG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin Complexed With Human Gelsolin Segment 1 At 1.75 A Resolution Length = 375

Iteration: 1
 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/373 (87%), Positives = 356/373 (95%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVIT+G ERFRCPE +FQPS +GMESAGIHET+YNSIMKCD+DIRKDLY N VLSGG
Sbjct: 243 PDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit Skeletal Muscle Actin And Latrunculin A At 2.85 A Resolution Length = 377

Iteration: 1
 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/377 (87%), Positives = 354/377 (93%)
Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA
Sbjct: 1   MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60
Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180
Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V
Sbjct: 241 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300
Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           +SGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI 
Sbjct: 301 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT 360
Query: 361 KSEYDESGPSIVHRKCF 377
           K EYDE+GPSIVHRKCF
Sbjct: 361 KQEYDEAGPSIVHRKCF 377

>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin Length = 375

Iteration: 1
 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/373 (88%), Positives = 354/373 (94%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           +DI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   DDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS +GMES GIHETT+NSIMKCDVDIRKDLY N VLSGG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound State Length = 374

Iteration: 1
 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/373 (88%), Positives = 353/373 (94%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 2   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 61
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 62  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 121
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 122 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 181
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTT EREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 182 RDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 241
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
            DGQVITIG ERFRCPE LFQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 242 KDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 301
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 302 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 361
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 362 DESGPSIVHRKCF 374

>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin D Length = 375

Iteration: 1
 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/373 (88%), Positives = 353/373 (94%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           E++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 3   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 63  GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSFTTT EREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYEL
Sbjct: 183 RDLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYEL 242
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
            DGQVITIG ERFRCPE LFQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGG
Sbjct: 243 KDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 302
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 303 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 365 DESGPSIVHRKCF 377
           DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375

>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In Complex With Skeletal Actin Length = 375

Iteration: 1
 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/375 (87%), Positives = 353/375 (94%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 361 EYDEAGPSIVHRKCF 375

>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin Length = 376

Iteration: 1
 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/376 (87%), Positives = 353/376 (93%)
Query: 2   ADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 61
            D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1   CDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 62  SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
           SKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKM 120
Query: 122 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 181
           TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLD 180
Query: 182 LAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKS 241
           LAGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 240
Query: 242 YELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVL 301
           YELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+
Sbjct: 241 YELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVM 300
Query: 302 SGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAK 361
           SGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K
Sbjct: 301 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITK 360
Query: 362 SEYDESGPSIVHRKCF 377
            EYDE+GPSIVHRKCF
Sbjct: 361 QEYDEAGPSIVHRKCF 376

>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin Domain 1 Length = 377

Iteration: 1
 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/377 (87%), Positives = 353/377 (93%)
Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA
Sbjct: 1   MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 60
Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
           QSKRGILTLKYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK 120
Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
           MTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL 180
Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           DLAGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EK
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 240
Query: 241 SYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIV 300
           SYELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V
Sbjct: 241 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV 300
Query: 301 LSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA 360
           +SGG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI 
Sbjct: 301 MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT 360
Query: 361 KSEYDESGPSIVHRKCF 377
           K EYDE+GPSIVHRKCF
Sbjct: 361 KQEYDEAGPSIVHRKCF 377

>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4: Implications For Arp23 ACTIVATION Length = 370

Iteration: 1
 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/368 (88%), Positives = 350/368 (95%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 63  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 122
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 123 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 183 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 243 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 302
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 303 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 362
Query: 370 SIVHRKCF 377
           SIVHRKCF
Sbjct: 363 SIVHRKCF 370

>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of Phosphate Length = 376

Iteration: 1
 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/375 (87%), Positives = 352/375 (93%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 2   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 62  KRGILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 121
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 181
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 241
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 242 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 301
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 361
Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 362 EYDEAGPSIVHRKCF 376

>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C Length = 375

Iteration: 1
 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/375 (87%), Positives = 352/375 (93%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360
Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 361 EYDEAGPSIVHRKCF 375

>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex With Gelsolin Segment 1 Length = 368

Iteration: 1
 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/375 (88%), Positives = 355/375 (94%), Gaps = 7/375 (1%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTG       KD+YVGDEAQS
Sbjct: 1   DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTG-------KDSYVGDEAQS 53
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 54  KRGILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 113
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDL
Sbjct: 114 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL 173
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD +MKILTERGYSFTTTAEREIVRD+KEKLAY+ALD+E E++TA +SSA+EKSY
Sbjct: 174 AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY 233
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS +GMESAGIHETTYNSIMKCDVDIRKDLYGN+VLS
Sbjct: 234 ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS 293
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TMFPGIADRM+KE++ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K 
Sbjct: 294 GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 353
Query: 363 EYDESGPSIVHRKCF 377
           EYDESGPSIVHRKCF
Sbjct: 354 EYDESGPSIVHRKCF 368

>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form Length = 371

Iteration: 1
 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/368 (88%), Positives = 349/368 (94%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 4   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 63
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 64  KYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 123
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 124 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 183
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 184 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 243
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 244 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 303
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 304 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 363
Query: 370 SIVHRKCF 377
           SIVHRKCF
Sbjct: 364 SIVHRKCF 371

>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex Length = 374

Iteration: 1
 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/373 (87%), Positives = 351/373 (94%)
Query: 5   EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
           E+   LVCDNG+G+ KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 2   EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 61
Query: 65  GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
           GILTLKYPIE GI++NWDDMEKIWHH+FYNELRVAPEEHP LLTEAPLNPKANREKMTQI
Sbjct: 62  GILTLKYPIEXGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQI 121
Query: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           MFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAG
Sbjct: 122 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAG 181
Query: 185 RDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL 244
           RDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYEL
Sbjct: 182 RDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYEL 241
Query: 245 PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 304
           PDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N VLSGG
Sbjct: 242 PDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGG 301
Query: 305 STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           +TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EY
Sbjct: 302 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 361
Query: 365 DESGPSIVHRKCF 377
           DE+GPSIVHRKCF
Sbjct: 362 DEAGPSIVHRKCF 374

>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That Nucleates Filament Assembly: Crystal Structure At 3.5 A Resolution Length = 371

Iteration: 1
 Score =  701 bits (1808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/368 (88%), Positives = 348/368 (94%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMV MGQ D+YVGDEAQSKRGILTL
Sbjct: 4   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQGDSYVGDEAQSKRGILTL 63
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 64  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 123
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 124 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 183
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 184 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 243
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 244 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 303
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 304 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 363
Query: 370 SIVHRKCF 377
           SIVHRKCF
Sbjct: 364 SIVHRKCF 371

>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 372

Iteration: 1
 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/372 (87%), Positives = 350/372 (94%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360
Query: 363 EYDESGPSIVHR 374
           EYDE+GPSIVHR
Sbjct: 361 EYDEAGPSIVHR 372

>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide Length = 371

Iteration: 1
 Score =  697 bits (1799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/371 (87%), Positives = 349/371 (94%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360
Query: 363 EYDESGPSIVH 373
           EYDE+GPSIVH
Sbjct: 361 EYDEAGPSIVH 371

>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex Length = 373

Iteration: 1
 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/372 (87%), Positives = 349/372 (93%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 2   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 62  KRGILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 121
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 122 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 181
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 182 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 241
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 242 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 301
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 361
Query: 363 EYDESGPSIVHR 374
           EYDE+GPSIVHR
Sbjct: 362 EYDEAGPSIVHR 373

>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/363 (89%), Positives = 347/363 (95%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETF
Sbjct: 63  KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 122
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD
Sbjct: 123 NTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ TA +SS++EKSYELPDGQV
Sbjct: 183 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS +GMES GIHETT+NSIMKCDVDIRKDLY N VLSGG+TM+P
Sbjct: 243 ITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYP 302
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGP
Sbjct: 303 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 362
Query: 370 SIV 372
           SIV
Sbjct: 363 SIV 365

>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/363 (88%), Positives = 345/363 (95%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 63  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 122
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 123 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 183 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 243 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 302
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 303 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 362
Query: 370 SIV 372
           SIV
Sbjct: 363 SIV 365

>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 364

Iteration: 1
 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/363 (88%), Positives = 344/363 (94%), Gaps = 1/363 (0%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 63  KYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 121
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 122 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 181
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 182 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 241
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 242 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 301
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GP
Sbjct: 302 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGP 361
Query: 370 SIV 372
           SIV
Sbjct: 362 SIV 364

>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1 Complex Length = 375

Iteration: 1
 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/372 (83%), Positives = 351/372 (94%)
Query: 6   DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65
           ++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKD+YVGDEAQSKRG
Sbjct: 4   EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 63
Query: 66  ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIM 125
           ILTL+YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAP+NPK+NREKMTQIM
Sbjct: 64  ILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIM 123
Query: 126 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 185
           FETFN PA YV+IQAVLSLY+SGRTTGIVLDSGDGV+H VPIY G++LPHAILR+DLAGR
Sbjct: 124 FETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGR 183
Query: 186 DLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP 245
           DLTD LMKIL+ERGYSF+TTAEREIVRD+KEKL Y+ALD+EQE++TA  SS++EKSYELP
Sbjct: 184 DLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELP 243
Query: 246 DGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGS 305
           DGQVITIG ERFR PE LF PS++G+ESAGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+
Sbjct: 244 DGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGT 303
Query: 306 TMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYD 365
           TMFPGIA+RM KEI+ALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWI+K EYD
Sbjct: 304 TMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYD 363
Query: 366 ESGPSIVHRKCF 377
           ESGPSIVH KCF
Sbjct: 364 ESGPSIVHHKCF 375

>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human Gelsolin Segment 1 Length = 375

Iteration: 1
 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/372 (83%), Positives = 350/372 (94%)
Query: 6   DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65
           ++  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKD+YVGDEAQSKRG
Sbjct: 4   EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 63
Query: 66  ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIM 125
           ILTL+YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAP+NPK+NREKMTQIM
Sbjct: 64  ILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIM 123
Query: 126 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 185
           FETFN PA YV+IQAVLSLY+SGRTTGIVLDSGDG +H VPIY G++LPHAILR+DLAGR
Sbjct: 124 FETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGR 183
Query: 186 DLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP 245
           DLTD LMKIL+ERGYSF+TTAEREIVRD+KEKL Y+ALD+EQE++TA  SS++EKSYELP
Sbjct: 184 DLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELP 243
Query: 246 DGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGS 305
           DGQVITIG ERFR PE LF PS++G+ESAGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+
Sbjct: 244 DGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGT 303
Query: 306 TMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYD 365
           TMFPGIA+RM KEI+ALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWI+K EYD
Sbjct: 304 TMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYD 363
Query: 366 ESGPSIVHRKCF 377
           ESGPSIVH KCF
Sbjct: 364 ESGPSIVHHKCF 375

>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357

Iteration: 1
 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/357 (88%), Positives = 338/357 (94%), Gaps = 1/357 (0%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 2   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 61
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 62  KYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 120
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 121 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 180
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 181 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 240
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 241 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 300
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDE 366
           GIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE
Sbjct: 301 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDE 357

>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/363 (84%), Positives = 345/363 (95%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           +YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAP+NPK+NREKMTQIMFETF
Sbjct: 63  RYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETF 122
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PA YV+IQAVLSLY+SGRTTGIVLDSGDGV+H VPIY G++LPHAILR+DLAGRDLTD
Sbjct: 123 NVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKIL+ERGYSF+TTAEREIVRD+KEKL Y+ALD+EQE++TA  SS++EKSYELPDGQV
Sbjct: 183 YLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFR PE LF PS++G+ESAGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+TMFP
Sbjct: 243 ITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFP 302
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIA+RM KEI+ALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWI+K EYDESGP
Sbjct: 303 GIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGP 362
Query: 370 SIV 372
           SIV
Sbjct: 363 SIV 365

>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 357

Iteration: 1
 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/355 (88%), Positives = 336/355 (94%), Gaps = 1/355 (0%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 4   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 63
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIE GI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 64  KYPIE-GIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 122
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD
Sbjct: 123 NVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQV
Sbjct: 183 YLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+P
Sbjct: 243 ITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYP 302
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY 364
           GIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K EY
Sbjct: 303 GIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEY 357

>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal Bundle In The Limulus Sperm Length = 365

Iteration: 1
 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/363 (84%), Positives = 344/363 (94%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 3   LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILTL 62
Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           +YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAP+NPK+NREKMTQIMFETF
Sbjct: 63  RYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFETF 122
Query: 130 NAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189
           N PA YV+IQAVLSLY+SGRTTGIVLDSGDG +H VPIY G++LPHAILR+DLAGRDLTD
Sbjct: 123 NVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGRDLTD 182
Query: 190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQV 249
            LMKIL+ERGYSF+TTAEREIVRD+KEKL Y+ALD+EQE++TA  SS++EKSYELPDGQV
Sbjct: 183 YLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQV 242
Query: 250 ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 309
           ITIG ERFR PE LF PS++G+ESAGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+TMFP
Sbjct: 243 ITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFP 302
Query: 310 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP 369
           GIA+RM KEI+ALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWI+K EYDESGP
Sbjct: 303 GIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGP 362
Query: 370 SIV 372
           SIV
Sbjct: 363 SIV 365

>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The Implication For Filament Nucleation Length = 359

Iteration: 1
 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/375 (83%), Positives = 338/375 (90%), Gaps = 16/375 (4%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGR                VGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGR----------------VGDEAQS 44
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 45  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 104
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 105 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 164
Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 165 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 224
Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 225 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 284
Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 285 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 344
Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 345 EYDEAGPSIVHRKCF 359

>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized With Atp And Crosslinked With Glutaraldehyde Length = 394

Iteration: 1
 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 179/387 (46%), Positives = 254/387 (65%), Gaps = 15/387 (3%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
           D++  + +VCDNGTG VK G+AG + P  +FPS+VGRP  R T  +  +  KD  VGDEA
Sbjct: 2   DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPSLVGRPIIRSTTKVGNIEIKDLMVGDEA 61
Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANRE 119
              R +L + YP+E+GIV NWDDM+ +W +TF  E L +      ILLTE P+NP  NRE
Sbjct: 62  SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNRE 121
Query: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
           K+ ++MFET+    +YVAIQAVL+LYA G  TG+V+DSGDGV+H  P+YEG++LPH   R
Sbjct: 122 KIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRR 181
Query: 180 LDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 239
           LD+AGRD+T  L+K+L  RGY+F  +A+ E VR +KEKL Y+  + EQE + A  ++ + 
Sbjct: 182 LDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241
Query: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNI 299
           +SY LPDG++I +G ERF  PE LFQP +I +E  G+ E  +N+I   D+D R + Y +I
Sbjct: 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 300 VLSGGSTMFPGIADRMSKEISAL-----------APSSMKIKVVAPPERKYSVWIGGSIL 348
           VLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++L
Sbjct: 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVL 361
Query: 349 AS-LSTFQQMWIAKSEYDESGPSIVHR 374
           A  +      W+ + EY E G  ++ +
Sbjct: 362 ADIMKDKDNFWMTRQEYQEKGVRVLEK 388

>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX Length = 394

Iteration: 1
 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/387 (45%), Positives = 255/387 (65%), Gaps = 15/387 (3%)
Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEA 60
           D++  + +VCDNGTG VK G+AG + P  +FP++VGRP  R T  +  +  KD  VGDEA
Sbjct: 2   DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEA 61
Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANRE 119
              R +L + YP+E+GIV NWDDM+ +W +TF  E L +      ILLTE P+NP  NRE
Sbjct: 62  SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNRE 121
Query: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
           K+ ++MFET+    +YVAIQAVL+LYA G  TG+V+DSGDGV+H  P+YEG++LPH   R
Sbjct: 122 KIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRR 181
Query: 180 LDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 239
           LD+AGRD+T  L+K+L  RGY+F  +A+ E VR +KEKL Y+  + EQE + A  ++ + 
Sbjct: 182 LDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241
Query: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNI 299
           +SY LPDG++I +G ERF  PE LFQP +I +E  G+ E  +N+I   D+D R + Y +I
Sbjct: 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 300 VLSGGSTMFPGIADRMSKEISAL-----------APSSMKIKVVAPPERKYSVWIGGSIL 348
           VLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++L
Sbjct: 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVL 361
Query: 349 ASLSTFQ-QMWIAKSEYDESGPSIVHR 374
           A +   +   W+ + EY E G  ++ +
Sbjct: 362 ADIMKDKDNFWMTRQEYQEKGVRVLEK 388

>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX Length = 418

Iteration: 1
 Score =  235 bits (599), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 153/407 (37%), Positives = 212/407 (52%), Gaps = 41/407 (10%)
Query: 11  VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQS 62
           V D GTG  K G+AG+  P+ + PS         VG      VM G+   D ++GDEA  
Sbjct: 9   VVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIE 68
Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           K    T K+PI HGIV +WD ME+      +  LR  PE+H  LLTE PLN   NRE   
Sbjct: 69  KPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTA 127
Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALP 174
           +IMFE+FN P +Y+A+QAVL+L AS  +        TG V+DSGDGV+H +P+ EGY + 
Sbjct: 128 EIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIG 187
Query: 175 HAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKT 234
             I  + +AGRD+T  + ++L +R          E  + +KE+ +Y+  D  +E     T
Sbjct: 188 SCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDT 247
Query: 235 S-SAVEKSYELPDG-----QVITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKC 287
             S   K Y   +        I +G ERF  PE+ F P     + +  I E     I  C
Sbjct: 248 DGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNC 307
Query: 288 DVDIRKDLYGNIVLSGGSTMFPGIADR--------------MSKEISA--LAPSSMKIKV 331
            +D+R+ LY NIVLSGGSTMF     R              +S+E+S   L P  + ++V
Sbjct: 308 PIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQV 367
Query: 332 VAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIV-HRKCF 377
           +    ++Y+VW GGS+LAS   F Q+   K +Y+E GPSI  H   F
Sbjct: 368 ITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVF 414

>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking The Arp2 Subunit Length = 427

Iteration: 1
 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 148/419 (35%), Positives = 215/419 (51%), Gaps = 59/419 (14%)
Query: 9   PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------MGQK------- 52
           P++ DNGTG  K G+AG+DAP  VFP+++   R  G   G         M  K       
Sbjct: 7   PIIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSS 65
Query: 53  -------DAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHP 104
                  D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR  PE+H 
Sbjct: 66  KRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHY 125
Query: 105 ILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLD 156
            LLTE PLNP  NRE   +IMFE+FN   +Y+A+QAVL+L AS  +        TG V+D
Sbjct: 126 FLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVD 185
Query: 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY--SFTTTAEREIVRDM 214
           SGDGV+H +P+ EGY +  +I  + LAGRD+T  +  +L +R    S   TAER     +
Sbjct: 186 SGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----I 240
Query: 215 KEKLAYIALDYEQELET--AKTSSAVEKSYELPDGQVITI--GAERFRCPEVLFQPSMIG 270
           KE+  Y+  D  +E      +    ++ + E   G   TI  G ERF  PE+ F P +  
Sbjct: 241 KEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIAS 300
Query: 271 MES-AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKE----------- 318
            +    + E   N +    +D+RK LY NIVLSGGST+F    +R+ ++           
Sbjct: 301 SDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHR 360
Query: 319 ---ISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHR 374
              +S      + + V++   ++ +VW GGS+LA    F      K++Y+E G SI  R
Sbjct: 361 SEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIARR 419

>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S. Cerevisiae Complexed With Atp Length = 498

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
Query: 265 QPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAP 324
           +P     E  G+ +  Y+SIM  DVD+R  L  N+VL+GG++  PG++DR+  E++ + P
Sbjct: 383 KPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP 442
Query: 325 SSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIAKSEYDESG 368
            S+K +++      ER+Y  W+GGSIL SL TF Q+W+ K EY+E G
Sbjct: 443 -SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVG 488

>pdb|4I6M|A Chain A, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of Swi/snf Chromatin Remodeler Length = 477

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILT 68
           +V  NG+    AGF+  + P+ + PS  + R    G    +      +   A+ + G   
Sbjct: 8   VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNXIDAAAEKRNGDEV 67
Query: 69  LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANR---EKMTQIM 125
                  G+  NWD +E  W + +  +L+V+PEE P+++T    N K +    E+  ++ 
Sbjct: 68  YTLVDSQGLPYNWDALEXQWRYLYDTQLKVSPEELPLVITXPATNGKPDXAILERYYELA 127
Query: 126 FETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 184
           F+  N P   + I+ +    + G+++  V+D G    +  PI +G  + +A++R    G
Sbjct: 128 FDKLNVPVFQIVIEPLAIALSXGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGG 186

>pdb|4FO0|A Chain A, Human Actin-Related Protein Arp8 In Its Atp-Bound State Length = 593

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 263 LFQPSMIGMESAGIHETTYNSIMKCDVD-IRKDLYGNIVLSGGSTMFPGIADRMSKEISA 321
           LF+   +G++ A +H     SI  C  D  +K +Y +I++ GG  MF    + +   I  
Sbjct: 472 LFEGKALGLDKAILH-----SIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILN 526
Query: 322 LAPSSMK-----IKVVAPPER---KYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVH 373
             P S +     + V+  P+    +   W GG++LA L T Q++WI + E+   G  ++ 
Sbjct: 527 KMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFGVRMLR 586
Query: 374 RK 375
            +
Sbjct: 587 ER 588

>pdb|4I6M|B Chain B, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of Swi/snf Chromatin Remodeler Length = 439

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 30/227 (13%)
Query: 104 PILLTEAPLNPKANREKMTQIMFETF------NAPAMYVAIQAVLSLYASGRTTGIVLDS 157
           P+LL       +++ E +TQ +FE+         PA   A  + +SL         ++D 
Sbjct: 110 PLLLITHHSWSQSDLEIITQYVFESLEINNLIQLPASLAATYSXISL-----QNCCIIDV 164
Query: 158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL----TERGYSFTTTAEREIVRD 213
           G   +  +PI +   L H +  +   G+ + D+L K+L     ++  S   +   E++ D
Sbjct: 165 GTHHTDIIPIVDYAQLDHLVSSIPXGGQSINDSLKKLLPQWDDDQIESLKKSPIFEVLSD 224
Query: 214 MKEKLAYIALDYEQELE---TAKTSSAVEKSYELPDGQVITIGAERFR-CPEVLFQPS-M 268
             +KL+      E E E   T K S     ++    G  I +G +RF+ C  ++   S  
Sbjct: 225 DAKKLSSFDFGNENEDEDEGTLKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKNISNR 284
Query: 269 IGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRM 315
           +G+    I           D++  K ++ NI++ GG+T   G  + +
Sbjct: 285 VGLTLDNID----------DINKAKAVWENIIIVGGTTSISGFKEAL 321

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	377
2fxu_A	375	Alpha-actin-1, actin, alpha skeletal muscle; actin	0.0
1k8k_B	394	ARP2, actin-like protein 2; beta-propeller, struct	0.0
1k8k_A	418	ARP3, actin-like protein 3, actin-2; beta-propelle	0.0
3dwl_A	427	Actin-related protein 3; propellor, actin-binding,	0.0
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	1e-159
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	8e-89
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ... Length = 375

 Score =  758 bits (1959), Expect = 0.0
 Identities = 328/375 (87%), Positives = 353/375 (94%)

Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQS 62
           D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQS
Sbjct: 1   DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 60

Query: 63  KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
           KRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMT
Sbjct: 61  KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMT 120

Query: 123 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 182
           QIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDL
Sbjct: 121 QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDL 180

Query: 183 AGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 242
           AGRDLTD LMKILTERGYSF TTAEREIVRD+KEKL Y+ALD+E E+ TA +SS++EKSY
Sbjct: 181 AGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240

Query: 243 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
           ELPDGQVITIG ERFRCPE LFQPS IGMESAGIHETTYNSIMKCD+DIRKDLY N V+S
Sbjct: 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMS 300

Query: 303 GGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKS 362
           GG+TM+PGIADRM KEI+ALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI K 
Sbjct: 301 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 360

Query: 363 EYDESGPSIVHRKCF 377
           EYDE+GPSIVHRKCF
Sbjct: 361 EYDEAGPSIVHRKCF 375

>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B* Length = 394

 Score =  726 bits (1876), Expect = 0.0
 Identities = 177/389 (45%), Positives = 253/389 (65%), Gaps = 15/389 (3%)

Query: 3   DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR--HTGVMVGMGQKDAYVGDEA 60
           D++  + +VCDNGTG VK G+AG + P  +FP++VGRP    T  +  +  KD  VGDEA
Sbjct: 2   DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEA 61

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANRE 119
              R +L + YP+E+GIV NWDDM+ +W +TF  E L +      ILLTE P+NP  NRE
Sbjct: 62  SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNRE 121

Query: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
           K+ ++MFET+    +YVAIQAVL+LYA G  TG+V+DSGDGV+H  P+YEG++LPH   R
Sbjct: 122 KIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRR 181

Query: 180 LDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 239
           LD+AGRD+T  L+K+L  RGY+F  +A+ E VR +KEKL Y+  + EQE + A  ++ + 
Sbjct: 182 LDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241

Query: 240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNI 299
           +SY LPDG++I +G ERF  PE LFQP +I +E  G+ E  +N+I   D+D R + Y +I
Sbjct: 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301

Query: 300 VLSGGSTMFPGIADRMSKEISAL-----------APSSMKIKVVAPPERKYSVWIGGSIL 348
           VLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++L
Sbjct: 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVL 361

Query: 349 ASLST-FQQMWIAKSEYDESGPSIVHRKC 376
           A +       W+ + EY E G  ++ +  
Sbjct: 362 ADIMKDKDNFWMTRQEYQEKGVRVLEKLG 390

>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A Length = 418

 Score =  723 bits (1869), Expect = 0.0
 Identities = 148/417 (35%), Positives = 210/417 (50%), Gaps = 43/417 (10%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGR--------PRHTGVMVGMGQK 52
           MA    +   V D GTG  K G+AG+  P+ + PS +               VM G+   
Sbjct: 1   MAG--RLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDL 58

Query: 53  DAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPL 112
           D ++GDEA  K      K+PI HGIV +WD ME+      +  LR  PE+H  LLTE PL
Sbjct: 59  DFFIGDEAIEKPT-YATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPL 117

Query: 113 NPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHT 164
           N   NRE   +IMFE+FN P +Y+A+QAVL+L AS  +        TG V+DSGDGV+H 
Sbjct: 118 NTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHV 177

Query: 165 VPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALD 224
           +P+ EGY +   I  + +AGRD+T  + ++L +R          E  + +KE+ +Y+  D
Sbjct: 178 IPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD 237

Query: 225 YEQELETAKT-SSAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSMIGME-SAGIH 277
             +E     T  S   K Y   +        I +G ERF  PE+ F P     + +  I 
Sbjct: 238 LVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPIS 297

Query: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIS----------------A 321
           E     I  C +D+R+ LY NIVLSGGSTMF     R+ +++                  
Sbjct: 298 EVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGR 357

Query: 322 LAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRK-CF 377
           L P  + ++V+    ++Y+VW GGS+LAS   F Q+   K +Y+E GPSI      F
Sbjct: 358 LKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVF 414

>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} Length = 427

 Score =  677 bits (1749), Expect = 0.0
 Identities = 137/426 (32%), Positives = 205/426 (48%), Gaps = 55/426 (12%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR------------------- 41
           MA      P++ DNGTG  K G+AG+DAP  VFP+++                       
Sbjct: 1   MAS--FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASK 58

Query: 42  ---HTGVMVGMGQKDAYVGDEAQSKRGI-LTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
              H          D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR
Sbjct: 59  GSGHLSSKRATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLR 118

Query: 98  VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT------- 150
             PE+H  LLTE PLNP  NRE   +IMFE+FN   +Y+A+QAVL+L AS  +       
Sbjct: 119 CEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRS 178

Query: 151 -TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAERE 209
            TG V+DSGDGV+H +P+ EGY +  +I  + LAGRD+T  +  +L +R    ++    +
Sbjct: 179 LTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSS---LK 235

Query: 210 IVRDMKEKLAYIALDYEQELETAKTSSAVEKS----YELPDGQVITIGAERFRCPEVLFQ 265
               +KE+  Y+  D  +E                         I +G ERF  PE+ F 
Sbjct: 236 TAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFN 295

Query: 266 PSMIGMESA-GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAP 324
           P +   +    + E   N +    +D+RK LY NIVLSGGST+F    +R+ +++  +  
Sbjct: 296 PEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVD 355

Query: 325 SSM--------------KIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPS 370
             +               + V++   ++ +VW GGS+LA    F      K++Y+E G S
Sbjct: 356 ERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGAS 415

Query: 371 IVHRKC 376
           I  R  
Sbjct: 416 IARRYQ 421

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498

 Score =  455 bits (1173), Expect = e-159
 Identities = 81/366 (22%), Positives = 136/366 (37%), Gaps = 37/366 (10%)

Query: 1   MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
           +   +++  +V D G+     G++G D P+++ PS+ G+          G K  +     
Sbjct: 17  VYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTA-----DEGNKKIFSEQSI 71

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PILLTEAPLNPKANRE 119
              R    LK  IE+G+V +WD  ++ W     NEL +      P LLTE   N   NR+
Sbjct: 72  GIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRK 131

Query: 120 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
           K  +++ E     A Y+A  +    +A+GR   +V+D G       PI +G  L  +  R
Sbjct: 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRR 191

Query: 180 LDLAGRDLTDALMKILTERGY-------------------------SFTTTAEREIVRDM 214
             +AG+ +   + K L  +                            +     R   ++ 
Sbjct: 192 NFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQEC 251

Query: 215 KEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSMIGMES 273
           KE L +I      E    + SS  ++S E P  + I    E R+   E LF P    + +
Sbjct: 252 KETLCHICPTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPA 311

Query: 274 AGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKI--KV 331
              +    NS +                SG +     +     KE  A++ S+       
Sbjct: 312 ---NWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSA 368

Query: 332 VAPPER 337
             P E 
Sbjct: 369 DTPNET 374

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae} Length = 498

 Score =  275 bits (705), Expect = 8e-89
 Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 12/223 (5%)

Query: 159 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL-MKILTERGYSFTTTAEREIVRDMKEK 217
                       Y     +                  + +   +     +R     + + 
Sbjct: 283 WNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKS 342

Query: 218 LAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIH 277
              +    E+E E              P         E  + P    +P     E  G+ 
Sbjct: 343 DKKVTPTEEKEQEA-------VSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLA 395

Query: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP-- 335
           +  Y+SIM  DVD+R  L  N+VL+GG++  PG++DR+  E++ + P S+K +++     
Sbjct: 396 DLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHT 454

Query: 336 -ERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 377
            ER+Y  W+GGSIL SL TF Q+W+ K EY+E G   +    F
Sbjct: 455 IERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 1e-05
 Identities = 32/224 (14%), Positives = 73/224 (32%), Gaps = 58/224 (25%)

Query: 181 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEK 240
           +   +D+ D    IL++        ++  +      +L +  L  ++E+        +  
Sbjct: 32  NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG--TLRLFWTLLSKQEEMVQKFVEEVLRI 89

Query: 241 SYE-LPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNS---IMKCDV------- 289
           +Y+ L             +      QPSM+        +  YN      K +V       
Sbjct: 90  NYKFL---------MSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYL 138

Query: 290 DIRKDLY-----GNIVLSGGSTMFPGIADRMSKEISALAPS---SMKIKVVAPPERKYSV 341
            +R+ L       N+++ G   +  G      K  + +A     S K++        + +
Sbjct: 139 KLRQALLELRPAKNVLIDG---V-LGSG----K--TWVALDVCLSYKVQCKMD----FKI 184

Query: 342 -WIG-------GSILASLST----FQQMWIAKSEYDESGPSIVH 373
            W+         ++L  L          W ++S++  +    +H
Sbjct: 185 FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	377
3dwl_A	427	Actin-related protein 3; propellor, actin-binding,	100.0
3qb0_A	498	Actin-related protein 4; actin fold, ATP binding,	100.0
2fxu_A	375	Alpha-actin-1, actin, alpha skeletal muscle; actin	100.0
1k8k_B	394	ARP2, actin-like protein 2; beta-propeller, struct	100.0
4fo0_A	593	Actin-related protein 8; chromatin remodeling, nuc	100.0
1k8k_A	418	ARP3, actin-like protein 3, actin-2; beta-propelle	100.0
4am6_A	655	Actin-like protein ARP8; nuclear protein, chromati	100.0
1jce_A	344	ROD shape-determining protein MREB; MBL, actin, HS	100.0
2v7y_A	509	Chaperone protein DNAK; HSP70, heat shock protein,	99.93
3h1q_A	272	Ethanolamine utilization protein EUTJ; ethanolamin	99.91
1dkg_D	383	Molecular chaperone DNAK; HSP70, GRPE, nucleotide	99.91
3qfu_A	394	78 kDa glucose-regulated protein homolog; HSP70, K	99.9
3i33_A	404	Heat shock-related 70 kDa protein 2; protein-ADP c	99.88
2kho_A	605	Heat shock protein 70; molecular chaperone, HSP70,	99.85
1yuw_A	554	Heat shock cognate 71 kDa protein; chaperone; 2.60	99.84
3d2f_A	675	Heat shock protein homolog SSE1; nucleotide exchan	99.83
4gni_A	409	Putative heat shock protein; HSP70-type ATPase, AT	99.82
4b9q_A	605	Chaperone protein DNAK; HET: ATP; 2.40A {Escherich	99.77
2ych_A	377	Competence protein PILM; cell cycle, type IV pilus	99.73
2fsj_A	346	Hypothetical protein TA0583; actin homologs, archa	99.72
4a2a_A	419	Cell division protein FTSA, putative; cell cycle,	99.64
2zgy_A	320	Plasmid segregation protein PARM; plasmid partitio	99.52
4apw_A	329	ALP12; actin-like protein; 19.70A {Clostridium tet	99.47
3js6_A	355	Uncharacterized PARM protein; partition, segregati	99.44
2d0o_A	610	DIOL dehydratase-reactivating factor large subunit	98.87
1nbw_A	607	Glycerol dehydratase reactivase alpha subunit; mol	98.86
4ehu_A	276	Activator of 2-hydroxyisocaproyl-COA dehydratase;	98.58
1hux_A	270	Activator of (R)-2-hydroxyglutaryl-COA dehydratase	97.6
1t6c_A	315	Exopolyphosphatase; alpha/beta protein, actin-like	96.73
2ews_A	287	Pantothenate kinase; PANK, structural genomics, st	96.48
2gup_A	292	ROK family protein; sugar kinase, streptococcus pn	96.27
3cer_A	343	Possible exopolyphosphatase-like protein; NESG, BL	95.87
2i7n_A	360	Pantothenate kinase 1; PANK, transferase; HET: ACO	95.72
3vgl_A	321	Glucokinase; ROK family, transferase; HET: BGC ANP	95.58
4db3_A	327	Glcnac kinase, N-acetyl-D-glucosamine kinase; stru	95.47
1u6z_A	513	Exopolyphosphatase; alpha/beta protein, askha (ace	95.41
3hi0_A	508	Putative exopolyphosphatase; 17739545, structural	95.29
3r8e_A	321	Hypothetical sugar kinase; ribonuclease H-like mot	95.1
4htl_A	297	Beta-glucoside kinase; structural genomics, sugar	95.09
3vov_A	302	Glucokinase, hexokinase; ROK, sugar kinase, transf	94.93
2qm1_A	326	Glucokinase; alpha-beta structure, putative helix-	94.53
3cet_A	334	Conserved archaeal protein; Q6M145, MRR63, NESG, X	93.47
3djc_A	266	Type III pantothenate kinase; structural genomics,	93.43
2h3g_X	268	Biosynthetic protein; pantothenate kinase, anthrax	91.65
3mdq_A	315	Exopolyphosphatase; structural genomics, joint cen	90.91
3bex_A	249	Type III pantothenate kinase; actin-like fold, ATP	90.39
1zbs_A	291	Hypothetical protein PG1100; alpha-beta protein.,	86.55
3zx3_A	452	Ectonucleoside triphosphate diphosphohydrolase 1;	86.25

>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.1e-81  Score=604.08  Aligned_cols=370  Identities=37%  Similarity=0.676  Sum_probs=322.2

Q ss_pred             CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCC----------------------CccccCCCccceeccchhc
Q 017102            5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT----------------------GVMVGMGQKDAYVGDEAQS   62 (377)
Q Consensus         5 ~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~----------------------~~~~~~~~~~~~vg~~~~~   62 (377)
                      .+.++||||+||+++|+||||++.|+++|||+++++++.                      ..+.+..+.+.+||+++..
T Consensus         3 ~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~   82 (427)
T 3dwl_A            3 SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALK   82 (427)
T ss_dssp             CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHH
T ss_pred             CCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhh
Confidence            367899999999999999999999999999999998753                      1112345568899999988


Q ss_pred             ccC-cceeeccccCCccCCHHHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhh
Q 017102           63 KRG-ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV  141 (377)
Q Consensus        63 ~~~-~~~~~~p~~~g~i~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~  141 (377)
                      ... ...+++|+++|.|.|||.++.+|+|+|.+.|++++.++|+++++|+++++..|+++++++||.|++|+++++++++
T Consensus        83 ~~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~v  162 (427)
T 3dwl_A           83 KASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAV  162 (427)
T ss_dssp             THHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHH
T ss_pred             CcccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHH
Confidence            765 6789999999999999999999999998999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcC--------CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHH
Q 017102          142 LSLYASG--------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRD  213 (377)
Q Consensus       142 ~a~~~~g--------~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~  213 (377)
                      +|+|++|        .++|+|||+|++.|+|+||++|+++.++.+++++||++++++|.++|.++++.   ..+.+.+++
T Consensus       163 la~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~  239 (427)
T 3dwl_A          163 LALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAER  239 (427)
T ss_dssp             HHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHH
T ss_pred             HHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHH
Confidence            9999998        68999999999999999999999999999999999999999999999877765   345688999


Q ss_pred             HhHhcceeecCHHHHHHHhccCCCccceEEc--CCCc--eEeeCCccccccccCCCCCCCCCC-CCChhHHHHHHHhcCC
Q 017102          214 MKEKLAYIALDYEQELETAKTSSAVEKSYEL--PDGQ--VITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCD  288 (377)
Q Consensus       214 ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--pd~~--~i~i~~~~~~~~e~lf~p~~~~~~-~~~l~~~I~~~i~~~~  288 (377)
                      +|+++|||+.|++++++.........+.|.+  |||.  .+.++.+||+++|+||+|++++.+ ..+|+++|.++|.+||
T Consensus       240 IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~  319 (427)
T 3dwl_A          240 IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSP  319 (427)
T ss_dssp             HHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSC
T ss_pred             HHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCC
Confidence            9999999999998888765443333556777  8887  788999999999999999999988 4899999999999999


Q ss_pred             HHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhC--------------CCCceEEEECCCCCccccchhhHHhhccccc
Q 017102          289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTF  354 (377)
Q Consensus       289 ~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~--------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~  354 (377)
                      +|+|+.|++|||||||+|++|||.+||++||+.+.              |...+++|..+++|.+++|+||||+|++++|
T Consensus       320 ~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f  399 (427)
T 3dwl_A          320 IDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEF  399 (427)
T ss_dssp             HHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTH
T ss_pred             HHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccch
Confidence            99999999999999999999999999999999886              4556799999999999999999999999999


Q ss_pred             ccccccHHHHhhcCCcccccccC
Q 017102          355 QQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       355 ~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      +++||||+||+|+|++|++||++
T Consensus       400 ~~~witk~EYeE~G~~iv~~~~~  422 (427)
T 3dwl_A          400 GSYCHTKADYEEYGASIARRYQI  422 (427)
T ss_dssp             HHHSEEHHHHHHSCGGGGSCCCC
T ss_pred             hheeEEHHHHhhhChHhheeccc
Confidence            99999999999999999999974

>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-79  Score=592.92  Aligned_cols=366  Identities=31%  Similarity=0.568  Sum_probs=330.8

Q ss_pred             CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccc-hhcccCcceeeccccCCccCCH
Q 017102            3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE-AQSKRGILTLKYPIEHGIVSNW   81 (377)
Q Consensus         3 ~~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~-~~~~~~~~~~~~p~~~g~i~~~   81 (377)
                      ..++..+||||+||.+||+||+|++.|++++||+++++++..      +++.+||++ +...++...+++|+++|.|.||
T Consensus        19 ggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dw   92 (498)
T 3qb0_A           19 GGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDW   92 (498)
T ss_dssp             CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEESCH
T ss_pred             CCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEccH
Confidence            457889999999999999999999999999999999987542      456789997 5555677889999999999999


Q ss_pred             HHHHHHHHHhcccccccCCCCC-cEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCC
Q 017102           82 DDMEKIWHHTFYNELRVAPEEH-PILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDG  160 (377)
Q Consensus        82 ~~~~~~~~~~~~~~L~~~~~~~-~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~  160 (377)
                      |.++.+|+|+|.+.|++.+.++ ||+|++|++++...|+++++++||.|++++++++++++||+|++|.++|+|||+|++
T Consensus        93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g  172 (498)
T 3qb0_A           93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD  172 (498)
T ss_dssp             HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred             HHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence            9999999999988899999999 999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhc------------------CCCccCh------h-HHHHHHHHh
Q 017102          161 VSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER------------------GYSFTTT------A-EREIVRDMK  215 (377)
Q Consensus       161 ~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~------------------~~~~~~~------~-~~~~~~~ik  215 (377)
                      .|+|+||++|+++.+++.++++||++++++|.++|.++                  ++.+...      . +.++++++|
T Consensus       173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK  252 (498)
T 3qb0_A          173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK  252 (498)
T ss_dssp             CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred             cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999864                  2333221      1 345899999


Q ss_pred             HhcceeecC--HHHHHHHhccCCCccceEEcCCCceEeeCCc-cccccccCCCCCCCCC---------------------
Q 017102          216 EKLAYIALD--YEQELETAKTSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSMIGM---------------------  271 (377)
Q Consensus       216 ~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~-~~~~~e~lf~p~~~~~---------------------  271 (377)
                      +++|||+.+  ++++...  ..+...+.|++|||+.|.++.+ ||++||.||+|++++.                     
T Consensus       253 E~~c~Va~~~~~~~~~~~--~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~  330 (498)
T 3qb0_A          253 ETLCHICPTKTLEETKTE--LSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP  330 (498)
T ss_dssp             HHTCCCCSSCHHHHHHHH--HHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred             HhhEEecCCccHhHHhhh--ccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence            999999987  4443322  1234578899999999999999 9999999999987643                     


Q ss_pred             -----------------------------------------------------------CCCChhHHHHHHHhcCCHHHH
Q 017102          272 -----------------------------------------------------------ESAGIHETTYNSIMKCDVDIR  292 (377)
Q Consensus       272 -----------------------------------------------------------~~~~l~~~I~~~i~~~~~~~r  292 (377)
                                                                                 +..||+++|.++|.+||.|+|
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r  410 (498)
T 3qb0_A          331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR  410 (498)
T ss_dssp             CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence                                                                       567999999999999999999


Q ss_pred             HhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECC---CCCccccchhhHHhhcccccccccccHHHHhhcCC
Q 017102          293 KDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWIAKSEYDESGP  369 (377)
Q Consensus       293 ~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~---~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~  369 (377)
                      +.|++||||+||+|++|||.+||++||+.+.| ..+++|..+   ++|.+++|+||||+|++.+|+++||||+||+|+|+
T Consensus       411 ~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~  489 (498)
T 3qb0_A          411 ATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGV  489 (498)
T ss_dssp             HHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCC
T ss_pred             HHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCc
Confidence            99999999999999999999999999999999 789999987   78999999999999999999999999999999999


Q ss_pred             -cccccccC
Q 017102          370 -SIVHRKCF  377 (377)
Q Consensus       370 -~~~~~k~~  377 (377)
                       .||+|||.
T Consensus       490 ~~iv~~kc~  498 (498)
T 3qb0_A          490 ERLLNDRFR  498 (498)
T ss_dssp             HHHHHHTTC
T ss_pred             HhhccccCc
Confidence             99999994

>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...

Probab=100.00  E-value=3.2e-77  Score=568.75  Aligned_cols=374  Identities=87%  Similarity=1.392  Sum_probs=342.5

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHH
Q 017102            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         4 ~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~   83 (377)
                      +++.++||||+||+++|+||++++.|++++||+++++++.....+...++.++|+++...++...+++|+++|.+.||+.
T Consensus         2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d~   81 (375)
T 2fxu_A            2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDD   81 (375)
T ss_dssp             --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHH
T ss_pred             CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHHH
Confidence            46789999999999999999999999999999999988766555555678899999998888889999999999999999


Q ss_pred             HHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceE
Q 017102           84 MEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH  163 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~  163 (377)
                      ++.+|+|+|.+.|++++.++++++++|++++..+|+++++++||.+++++++++++|+||+|++|..+++|||+|+++|+
T Consensus        82 ~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~  161 (375)
T 2fxu_A           82 MEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH  161 (375)
T ss_dssp             HHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred             HHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence            99999999988899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEE
Q 017102          164 TVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYE  243 (377)
Q Consensus       164 v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~  243 (377)
                      |+||++|+++.++..++++||++++++|.++|..+++++....+.+.++++|+++|+++.++.++++.....+.....|.
T Consensus       162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~  241 (375)
T 2fxu_A          162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE  241 (375)
T ss_dssp             EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred             EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence            99999999998888999999999999999999988888876667889999999999999998887766555455678899


Q ss_pred             cCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhC
Q 017102          244 LPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA  323 (377)
Q Consensus       244 ~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~  323 (377)
                      +|||+.+.++.+||.++|.||+|++++.+..+|.++|.++|.+||.++|+.+++||+||||+|++|||.+||++||..+.
T Consensus       242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~  321 (375)
T 2fxu_A          242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA  321 (375)
T ss_dssp             CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence            99999999999999999999999999989999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          324 PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       324 ~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                      |...++++..+++|.+++|+||+++|++++|+++||||+||+|+|+++++||||
T Consensus       322 p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~  375 (375)
T 2fxu_A          322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF  375 (375)
T ss_dssp             CTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred             CCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence            988889999999999999999999999999999999999999999999999997

>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*

Probab=100.00  E-value=1.9e-76  Score=566.23  Aligned_cols=372  Identities=47%  Similarity=0.888  Sum_probs=164.8

Q ss_pred             CCCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCcc-c-cCCCccceeccchhcccCcceeeccccCCccCC
Q 017102            3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM-V-GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN   80 (377)
Q Consensus         3 ~~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~-~-~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~   80 (377)
                      .+.+.++||||+||+++|+||++++.|++++||+++++++.... . +...++.++|+++...++...+++|+++|.+.|
T Consensus         2 ~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~d   81 (394)
T 1k8k_B            2 DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRN   81 (394)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEec
Confidence            35577899999999999999999999999999999988765322 1 223467899999988877788999999999999


Q ss_pred             HHHHHHHHHHhc-ccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCC
Q 017102           81 WDDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGD  159 (377)
Q Consensus        81 ~~~~~~~~~~~~-~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~  159 (377)
                      |+.++.+|+|+| .+.|++++.++++++++|++++...|+++++++||.+++++++++++|+||+|++|.++++|||+|+
T Consensus        82 wd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~  161 (394)
T 1k8k_B           82 WDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGD  161 (394)
T ss_dssp             ------------------------------------------------------------------------CCEEEECS
T ss_pred             HHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCC
Confidence            999999999999 8899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCcc
Q 017102          160 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE  239 (377)
Q Consensus       160 ~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~  239 (377)
                      ++|+|+||++|+++.++..++++||++++++|.++|.++++++....+.+.++++|+++|+++.++..+++.....+...
T Consensus       162 g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~  241 (394)
T 1k8k_B          162 GVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV  241 (394)
T ss_dssp             SCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred             CceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence            99999999999999998999999999999999999999888887666788999999999999999877776554444556


Q ss_pred             ceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHH
Q 017102          240 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI  319 (377)
Q Consensus       240 ~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el  319 (377)
                      ..|.+|||+.+.++.+||+++|+||+|++++.+..+|+++|.++|.+||.++|+.+++||+||||+|++|||.+||++||
T Consensus       242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el  321 (394)
T 1k8k_B          242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL  321 (394)
T ss_dssp             EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred             eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhC-----------CCCceEEEECCCCCccccchhhHHhhcccccc-cccccHHHHhhcCCccccc
Q 017102          320 SALA-----------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWIAKSEYDESGPSIVHR  374 (377)
Q Consensus       320 ~~~~-----------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~-~~~itr~~y~e~G~~~~~~  374 (377)
                      ..+.           |...++++..+++|.+++|+||+++|++++|+ ++||||+||+|+|+++++|
T Consensus       322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~  388 (394)
T 1k8k_B          322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK  388 (394)
T ss_dssp             HHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred             HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence            9887           77778899889999999999999999999999 9999999999999999987

>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.1e-73  Score=571.17  Aligned_cols=370  Identities=21%  Similarity=0.389  Sum_probs=293.7

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCcc----------------------------------------
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM----------------------------------------   46 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~----------------------------------------   46 (377)
                      +++||||+||.++|+|||||+.|+ .+|++++++......                                        
T Consensus        15 ~~iIVIdpGS~~~riG~A~d~~P~-~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (593)
T 4fo0_A           15 NFIIVIHPGSTTLRIGRATDTLPA-SIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN   93 (593)
T ss_dssp             GGEEEEECCSSEEEEEETTCSSCE-EEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred             CCEEEEeCCCCCeEeeecCCCCCC-eeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence            558999999999999999999997 569999987532110                                        


Q ss_pred             ---------------------------------ccCCCccceeccchhcc--cCcceeeccccCC-----------ccCC
Q 017102           47 ---------------------------------VGMGQKDAYVGDEAQSK--RGILTLKYPIEHG-----------IVSN   80 (377)
Q Consensus        47 ---------------------------------~~~~~~~~~vg~~~~~~--~~~~~~~~p~~~g-----------~i~~   80 (377)
                                                       ......+++||++|+..  .+.+.++|||++|           .+.+
T Consensus        94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~  173 (593)
T 4fo0_A           94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV  173 (593)
T ss_dssp             SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred             ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence                                             01123567999999753  5678999999999           4678


Q ss_pred             HHHHHHHHHHhcccccccCCCC---CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeC
Q 017102           81 WDDMEKIWHHTFYNELRVAPEE---HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDS  157 (377)
Q Consensus        81 ~~~~~~~~~~~~~~~L~~~~~~---~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDi  157 (377)
                      |++++.+|+|+|.+.|++.+++   |+|||++|+++++..|+.+++++||.|+||++++.++++||+|++|++||||||+
T Consensus       174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi  253 (593)
T 4fo0_A          174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV  253 (593)
T ss_dssp             HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence            9999999999998999998765   9999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCcc-----ChhHHHHHHHHhHhcceeecCHHHH----
Q 017102          158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT-----TTAEREIVRDMKEKLAYIALDYEQE----  228 (377)
Q Consensus       158 G~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~-----~~~~~~~~~~ik~~~~~v~~~~~~~----  228 (377)
                      |++.|+|+||+||+++.++..++++||++++++|.++|.++++.+.     ...++++++++|+++||++.++..+    
T Consensus       254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~  333 (593)
T 4fo0_A          254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE  333 (593)
T ss_dssp             CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred             CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence            9999999999999999999999999999999999999999887654     3457889999999999998764211    


Q ss_pred             ---------------------HHH----------------------------------------------hccCCCccce
Q 017102          229 ---------------------LET----------------------------------------------AKTSSAVEKS  241 (377)
Q Consensus       229 ---------------------~~~----------------------------------------------~~~~~~~~~~  241 (377)
                                           +..                                              ..........
T Consensus       334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (593)
T 4fo0_A          334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS  413 (593)
T ss_dssp             EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred             hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence                                 000                                              0000112345


Q ss_pred             EEcCCCceEeeCCccccccccCCCCCCC--------------------------------CCCCCChhHHHHHHHhcCC-
Q 017102          242 YELPDGQVITIGAERFRCPEVLFQPSMI--------------------------------GMESAGIHETTYNSIMKCD-  288 (377)
Q Consensus       242 ~~~pd~~~i~i~~~~~~~~e~lf~p~~~--------------------------------~~~~~~l~~~I~~~i~~~~-  288 (377)
                      +..|++..+.++.+|+.++|.||.|+..                                +.+..||+++|.++|.+|+ 
T Consensus       414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~  493 (593)
T 4fo0_A          414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS  493 (593)
T ss_dssp             ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred             ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence            7788999999999999999999998542                                1235689999999999997 


Q ss_pred             HHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCc-----eEEEECCC---CCccccchhhHHhhccccccccccc
Q 017102          289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSM-----KIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIA  360 (377)
Q Consensus       289 ~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~-----~v~v~~~~---~~~~~~w~Gasi~a~l~~~~~~~it  360 (377)
                      .|.|+.|++|||||||+|++|||.+||++||+.++|...     +++|+.++   ||.+++|+||||+|+|++|+++|||
T Consensus       494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wIt  573 (593)
T 4fo0_A          494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIY  573 (593)
T ss_dssp             HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEE
T ss_pred             HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeEC
Confidence            699999999999999999999999999999999998643     58999886   8999999999999999999999999


Q ss_pred             HHHHhhcCCcccccccC
Q 017102          361 KSEYDESGPSIVHRKCF  377 (377)
Q Consensus       361 r~~y~e~G~~~~~~k~~  377 (377)
                      |+||+|+|++||++||+
T Consensus       574 k~EYeE~G~~il~~kc~  590 (593)
T 4fo0_A          574 QREWQRFGVRMLRERAA  590 (593)
T ss_dssp             HHHHHHHTTHHHHHHCS
T ss_pred             HHHHHhhCcHHHhhcCC
Confidence            99999999999999995

>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A

Probab=100.00  E-value=5.5e-71  Score=533.61  Aligned_cols=370  Identities=39%  Similarity=0.687  Sum_probs=331.9

Q ss_pred             CCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc--------cccCCCccceeccchhcccCcceeeccccCC
Q 017102            5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHG   76 (377)
Q Consensus         5 ~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g   76 (377)
                      .+.++||||+||+++|+||++++.|++++||+++++++...        ..+....+.+||+++...++ ..+++|+++|
T Consensus         3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~-~~~~~pi~~G   81 (418)
T 1k8k_A            3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPT-YATKWPIRHG   81 (418)
T ss_dssp             CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTT-SEEECCEETT
T ss_pred             CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCC-CEEeccccCC
Confidence            46689999999999999999999999999999998876421        12223346899999988764 7899999999


Q ss_pred             ccCCHHHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhh---------c
Q 017102           77 IVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYA---------S  147 (377)
Q Consensus        77 ~i~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~---------~  147 (377)
                      .+.||+.++.+|+++|.+.|+++++++++++++|++++...|+.+.+++||.+++++++++++|+||+|+         .
T Consensus        82 ~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~  161 (418)
T 1k8k_A           82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER  161 (418)
T ss_dssp             EESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred             EECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence            9999999999999999788999888999999999999999999999999999999999999999999998         5


Q ss_pred             CCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHH
Q 017102          148 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQ  227 (377)
Q Consensus       148 g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~  227 (377)
                      +. +|+|||+|+++|+|+||++|+++.++...+++||++++++|.++|.+++..+....+.+.++++|+++|+++.++.+
T Consensus       162 ~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~  240 (418)
T 1k8k_A          162 TL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK  240 (418)
T ss_dssp             CC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred             CC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence            66 89999999999999999999999988899999999999999999998888776666788999999999999998877


Q ss_pred             HHHHhccC-CCccceEEcCCCc-----eEeeCCccccccccCCCCCCCCCCC-CChhHHHHHHHhcCCHHHHHhhhcCeE
Q 017102          228 ELETAKTS-SAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSMIGMES-AGIHETTYNSIMKCDVDIRKDLYGNIV  300 (377)
Q Consensus       228 ~~~~~~~~-~~~~~~~~~pd~~-----~i~i~~~~~~~~e~lf~p~~~~~~~-~~l~~~I~~~i~~~~~~~r~~l~~nIv  300 (377)
                      ++++.... ......|.+||+.     .+.++.+||.++|+||+|++.+.+. .+|.++|.++|.+||.++|+.+++||+
T Consensus       241 e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~Iv  320 (418)
T 1k8k_A          241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIV  320 (418)
T ss_dssp             HHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEE
T ss_pred             HHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceE
Confidence            76544322 2234689999988     8999999999999999999887764 799999999999999999999999999


Q ss_pred             EecCCCCCCChHHHHHHHHhhhC----------------CCCceEEEECCCCCccccchhhHHhhcccccccccccHHHH
Q 017102          301 LSGGSTMFPGIADRMSKEISALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEY  364 (377)
Q Consensus       301 l~GG~s~i~g~~~rl~~el~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y  364 (377)
                      ||||+|++|||.+||++||..++                |...++++..+++|.+++|+|||++|++++|+++||||+||
T Consensus       321 L~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey  400 (418)
T 1k8k_A          321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDY  400 (418)
T ss_dssp             EESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHH
T ss_pred             EeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHH
Confidence            99999999999999999999875                56667899999999999999999999999999999999999


Q ss_pred             hhcCCccccccc
Q 017102          365 DESGPSIVHRKC  376 (377)
Q Consensus       365 ~e~G~~~~~~k~  376 (377)
                      +|+|+++++|||
T Consensus       401 ~e~G~~~~~~~~  412 (418)
T 1k8k_A          401 EEIGPSICRHNP  412 (418)
T ss_dssp             HHHCGGGGGCCC
T ss_pred             hhhCHHHHhhhc
Confidence            999999999976

>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*

Probab=100.00  E-value=7.2e-60  Score=459.25  Aligned_cols=363  Identities=21%  Similarity=0.418  Sum_probs=302.7

Q ss_pred             CCCCCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc---------c----------------------------
Q 017102            4 TEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------M----------------------------   46 (377)
Q Consensus         4 ~~~~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~---------~----------------------------   46 (377)
                      .+..++|||++||.++|+|+|.|..|. .+|++++++.....         .                            
T Consensus        37 ~~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~  115 (655)
T 4am6_A           37 NDPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYY  115 (655)
T ss_dssp             CCGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence            355789999999999999999999998 77999986532100         0                            


Q ss_pred             -----------------------cc---------C--CCccceeccchhcc-cCcceeeccccCCccC----C-------
Q 017102           47 -----------------------VG---------M--GQKDAYVGDEAQSK-RGILTLKYPIEHGIVS----N-------   80 (377)
Q Consensus        47 -----------------------~~---------~--~~~~~~vg~~~~~~-~~~~~~~~p~~~g~i~----~-------   80 (377)
                                             +.         +  ...+.+||++|..+ ++.+.+++|+++|.+.    |       
T Consensus       116 k~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~  195 (655)
T 4am6_A          116 KRKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAEL  195 (655)
T ss_dssp             SCCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHH
T ss_pred             CCCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCcccccccc
Confidence                                   00         0  12477899999884 6778999999999998    8       


Q ss_pred             HHHHHHHHHHhccc-ccccCCC---CCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcC-CceEEEE
Q 017102           81 WDDMEKIWHHTFYN-ELRVAPE---EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG-RTTGIVL  155 (377)
Q Consensus        81 ~~~~~~~~~~~~~~-~L~~~~~---~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~~~lVV  155 (377)
                      |+.++.+|+|+|.+ .|+++++   ++||+|++|+++++..|+.+++++||.|++++++++.++++|+|++| .++||||
T Consensus       196 WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVV  275 (655)
T 4am6_A          196 ISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVV  275 (655)
T ss_dssp             HHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEE
T ss_pred             HHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEE
Confidence            99999999999973 8999886   79999999999999999999999999999999999999999999999 6999999


Q ss_pred             eCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCC-----CccChhHHHHHHHHhHhcceee-cCHHHHH
Q 017102          156 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY-----SFTTTAEREIVRDMKEKLAYIA-LDYEQEL  229 (377)
Q Consensus       156 DiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~ik~~~~~v~-~~~~~~~  229 (377)
                      |+|++.|+|+||++|+++.+++.++++||++++++|.++|.++++     ++....+.+++++||+++|||+ .|..   
T Consensus       276 DiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~---  352 (655)
T 4am6_A          276 NIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA---  352 (655)
T ss_dssp             EECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC---
T ss_pred             cCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh---
Confidence            999999999999999999999999999999999999999999987     4577788999999999999994 4431   


Q ss_pred             HHhccCCCccceE--EcCCC----ceEeeCCccccccccCCCCCCCC---------------------------------
Q 017102          230 ETAKTSSAVEKSY--ELPDG----QVITIGAERFRCPEVLFQPSMIG---------------------------------  270 (377)
Q Consensus       230 ~~~~~~~~~~~~~--~~pd~----~~i~i~~~~~~~~e~lf~p~~~~---------------------------------  270 (377)
                             .....|  ..|++    ..+.++.|||++||+||.|++++                                 
T Consensus       353 -------~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~  425 (655)
T 4am6_A          353 -------VQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSL  425 (655)
T ss_dssp             -------SEEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCH
T ss_pred             -------hhhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccch
Confidence                   112222  33554    36889999999999999986430                                 


Q ss_pred             ----------------------------------------------CCCCChhHHHHHHHhc-C---CHHHHHhhhcCeE
Q 017102          271 ----------------------------------------------MESAGIHETTYNSIMK-C---DVDIRKDLYGNIV  300 (377)
Q Consensus       271 ----------------------------------------------~~~~~l~~~I~~~i~~-~---~~~~r~~l~~nIv  300 (377)
                                                                    ....+|..+|.++|.. |   +....+++++||+
T Consensus       426 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nil  505 (655)
T 4am6_A          426 SQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNIL  505 (655)
T ss_dssp             HHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEE
T ss_pred             hHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEE
Confidence                                                          0024889999999974 2   3333459999999


Q ss_pred             EecCCCCCCChHHHHHHHHhhhCC--------------------------------------------------------
Q 017102          301 LSGGSTMFPGIADRMSKEISALAP--------------------------------------------------------  324 (377)
Q Consensus       301 l~GG~s~i~g~~~rl~~el~~~~~--------------------------------------------------------  324 (377)
                      +|||+|+||||...|...+...-|                                                        
T Consensus       506 ivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  585 (655)
T 4am6_A          506 IVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQ  585 (655)
T ss_dssp             EESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHH
T ss_pred             EEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhh
Confidence            999999999998766555543111                                                        


Q ss_pred             -----------CCceEEEECCCCC---ccccchhhHHhhcccccccccccHHHHhhcCCcccccccC
Q 017102          325 -----------SSMKIKVVAPPER---KYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF  377 (377)
Q Consensus       325 -----------~~~~v~v~~~~~~---~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~~k~~  377 (377)
                                 ...+|+|..+|++   .+++|+|||++|++++|.++||||+||+|.|++||++||+
T Consensus       586 ~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~  652 (655)
T 4am6_A          586 HQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI  652 (655)
T ss_dssp             HHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred             hhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence                       0134788888854   8999999999999999999999999999999999999985

>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A

Probab=100.00  E-value=2.9e-36  Score=283.59  Aligned_cols=307  Identities=15%  Similarity=0.215  Sum_probs=237.7

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhccc----CcceeeccccCCccCCHHH
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~~~~~   83 (377)
                      .+|+||+||+++++|+.++. |...+||+++...+.       ....++|++|....    ....+.+|+++|.+.+|+.
T Consensus         4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~   75 (344)
T 1jce_A            4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV   75 (344)
T ss_dssp             CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred             ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHH
Confidence            68999999999999998765 666789999876531       23457999987653    2345678999999999999


Q ss_pred             HHHHHHHhcccccccC-CCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeC
Q 017102           84 MEKIWHHTFYNELRVA-PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDS  157 (377)
Q Consensus        84 ~~~~~~~~~~~~L~~~-~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDi  157 (377)
                      .+++|.+++.+..... ....++++++|..++..+|+.+.++ ++.+|++.+.++++|+||+++++.     .+.+|||+
T Consensus        76 ~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDi  154 (344)
T 1jce_A           76 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDI  154 (344)
T ss_dssp             HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEE
T ss_pred             HHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEe
Confidence            9999999984322222 3468899999999999999998885 599999999999999999999986     68999999


Q ss_pred             CCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhc-CCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCC
Q 017102          158 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER-GYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSS  236 (377)
Q Consensus       158 G~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~-~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~  236 (377)
                      |+++|+++++..|.++  .....++||+++++.+.+++.++ +..+    ..+.++++|+++++...+...+        
T Consensus       155 Gggttdvsv~~~~~~~--~~~~~~lGG~~id~~l~~~l~~~~~~~~----~~~~ae~~K~~l~~~~~~~~~~--------  220 (344)
T 1jce_A          155 GGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRVAI----GERTAERVKIEIGNVFPSKEND--------  220 (344)
T ss_dssp             CSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCEEC----CHHHHHHHHHHHCBCSCCHHHH--------
T ss_pred             CCCeEEEEEEEcCCEE--eeCCCCccChhHHHHHHHHHHHHhCccc----CHHHHHHHHHHHhccCccccCC--------
Confidence            9999999999999887  45688999999999999998754 2222    2467999999999875443211        


Q ss_pred             CccceEEc-----CCCc--eEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhh-cCeEEecCCCCC
Q 017102          237 AVEKSYEL-----PDGQ--VITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLY-GNIVLSGGSTMF  308 (377)
Q Consensus       237 ~~~~~~~~-----pd~~--~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~-~nIvl~GG~s~i  308 (377)
                        ...+.+     .+|.  .+.++.+++.   .+|+|..     ..+.+.|.++|.+++.+.+..++ ++|+||||+|++
T Consensus       221 --~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~  290 (344)
T 1jce_A          221 --ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLL  290 (344)
T ss_dssp             --HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCS
T ss_pred             --cceEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccc
Confidence              112222     3554  3444444443   2333311     23788888999999988888888 799999999999


Q ss_pred             CChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc-ccccc
Q 017102          309 PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQ  355 (377)
Q Consensus       309 ~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~-l~~~~  355 (377)
                      |||.++|++++..      +  +..+++|.+++|.||++++. ++.|+
T Consensus       291 p~l~~~l~~~~~~------~--v~~~~~p~~ava~Gaa~~a~~~~~~~  330 (344)
T 1jce_A          291 RGLDTLLQKETGI------S--VIRSEEPLTAVAKGAGMVLDKVNILK  330 (344)
T ss_dssp             BTHHHHHHHHHSS------C--EEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred             hHHHHHHHHHHCC------C--ccccCChHHHHHHHHHHHHhChHHHH
Confidence            9999999999942      2  33466889999999999998 45553

>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}

Probab=99.93  E-value=1.7e-26  Score=227.55  Aligned_cols=297  Identities=16%  Similarity=0.212  Sum_probs=200.3

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCC--------CCceEEeeCCCCccccCCCccceeccchhccc-----Ccceeec---
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR-----GILTLKY---   71 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~-----~~~~~~~---   71 (377)
                      .+|+||+||++++++++.+..|..+        +||+++..          +...++|++|....     ....+++   
T Consensus         3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg   72 (509)
T 2v7y_A            3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG   72 (509)
T ss_dssp             CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred             CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence            5899999999999999987777655        77777762          23467898876542     1223333   


Q ss_pred             -ccc---CCccCCH-HHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhh
Q 017102           72 -PIE---HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS  143 (377)
Q Consensus        72 -p~~---~g~i~~~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a  143 (377)
                       |++   +|...+. +....+++++..   ..++  .....+++++|..++..+|+.+.+++ +.+|++.+.++++|.||
T Consensus        73 ~p~~~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~~~~~VitvPa~~~~~qr~a~~~a~-~~AGl~~~~li~Ep~AA  149 (509)
T 2v7y_A           73 TDYKVEIEGKQYTPQEISAIILQYLKSYAEDYLG--EPVTRAVITVPAYFNDAQRQATKDAG-RIAGLEVERIINEPTAA  149 (509)
T ss_dssp             SCCCEEETTEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHH
T ss_pred             CCcEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEecCHHHH
Confidence             554   5542222 222333333321   1122  23468999999999999999988876 88999999999999999


Q ss_pred             hhhcCC-----ceEEEEeCCCCceEEEEee--CCee-cCCceEEEcccHHHHHHHHHHHHHhc-----CCCccChh----
Q 017102          144 LYASGR-----TTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA----  206 (377)
Q Consensus       144 ~~~~g~-----~~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~----  206 (377)
                      ++++|.     .+.+|+|+|+++++++.+.  +|.. +.......++||.++++.|.+++.++     +.++....    
T Consensus       150 Alay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~  229 (509)
T 2v7y_A          150 ALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQ  229 (509)
T ss_dssp             HHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHH
T ss_pred             HHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHH
Confidence            999886     4799999999999999776  3533 22233456899999999999888653     44432211    


Q ss_pred             -HHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC------CC---ceEeeCCccccccccCCCCCCCCCCCCCh
Q 017102          207 -EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG---QVITIGAERFRCPEVLFQPSMIGMESAGI  276 (377)
Q Consensus       207 -~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------d~---~~i~i~~~~~~~~e~lf~p~~~~~~~~~l  276 (377)
                       -...++++|+.++...                ...+.+|      +|   ..+.++.+++.   .+|.|-.     ..+
T Consensus       230 ~l~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~fe---~l~~~~~-----~~i  285 (509)
T 2v7y_A          230 RLKDAAEKAKKELSGVT----------------QTQISLPFISANENGPLHLEMTLTRAKFE---ELSAHLV-----ERT  285 (509)
T ss_dssp             HHHHHHHHHHHHTTTCS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHHH---HHTHHHH-----HTT
T ss_pred             HHHHHHHHHHHhcCCCC----------------cEEEEEeccccCCCCCeeEEEEEEHHHHH---HHHHHHH-----HHH
Confidence             1355777777776431                1122222      23   12233433332   2333311     126


Q ss_pred             hHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          277 HETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       277 ~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+.|.++|..+.  +....+++|+||||+|++|++.++|++++..        .+..+.+|..++|.||+++|..
T Consensus       286 ~~~i~~~L~~a~--~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~  350 (509)
T 2v7y_A          286 MGPVRQALQDAG--LTPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV  350 (509)
T ss_dssp             HHHHHHHHHHHT--CCGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcC--CChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence            777778887664  2345678999999999999999999999842        2334678899999999999864

>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}

Probab=99.91  E-value=5.9e-24  Score=193.00  Aligned_cols=244  Identities=16%  Similarity=0.159  Sum_probs=178.6

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHHHHH
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK   86 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~~~~   86 (377)
                      .-.++||+||.++|+.+..++. .     .++.                 +         .....|+++|.+.||+..+.
T Consensus        28 ~~~~gIDiGS~s~k~vi~~~~~-~-----~l~~-----------------~---------~~~~~~l~~g~i~d~~~~~~   75 (272)
T 3h1q_A           28 PYKVGVDLGTADIVLVVTDQEG-I-----PVAG-----------------A---------LKWASVVKDGLVVDYIGAIQ   75 (272)
T ss_dssp             CCEEEEECCSSEEEEEEECTTC-C-----EEEE-----------------E---------EEECCCCBTTBCTTHHHHHH
T ss_pred             CEEEEEEcccceEEEEEECCCC-c-----EEEE-----------------E---------eecccccCCCEEEcHHHHHH
Confidence            4579999999999998853321 1     1111                 1         11236889999999999999


Q ss_pred             HHHHhccccccc-CCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceEEEEeCCCCceEEE
Q 017102           87 IWHHTFYNELRV-APEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV  165 (377)
Q Consensus        87 ~~~~~~~~~L~~-~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~lVVDiG~~~t~v~  165 (377)
                      +|++++...... ......++++.|..+....|+. ++.+++.+|++...+..++.|++++++..+++|||+|+++|+++
T Consensus        76 ~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~-~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~  154 (272)
T 3h1q_A           76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAEA-CGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIA  154 (272)
T ss_dssp             HHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTH-HHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred             HHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHH-HHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEE
Confidence            999997543332 2233567788887776666655 45567999999999999999999999999999999999999999


Q ss_pred             EeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC
Q 017102          166 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP  245 (377)
Q Consensus       166 pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p  245 (377)
                      ++.+|.++  .....++||.++++.+.+.+.         .+.+.++++|++++.     .+++...             
T Consensus       155 ~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~-----~~~~~~~-------------  205 (272)
T 3h1q_A          155 VIEKGKIT--ATFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSR-----HREIMRV-------------  205 (272)
T ss_dssp             EEETTEEE--EECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTT-----HHHHHHH-------------
T ss_pred             EEECCEEE--EEecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCC-----HHHHHHH-------------
Confidence            99999988  456789999999999998873         134568888888761     1111110             


Q ss_pred             CCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCC
Q 017102          246 DGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS  325 (377)
Q Consensus       246 d~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~  325 (377)
                                    .+.++.         .+.+.+.+.+.+++      ..++|+||||+|++|||.++|++++..    
T Consensus       206 --------------~~~~~~---------~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~~----  252 (272)
T 3h1q_A          206 --------------VRPVIE---------KMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLGK----  252 (272)
T ss_dssp             --------------HHHHHH---------HHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHSS----
T ss_pred             --------------HHHHHH---------HHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhCC----
Confidence                          011111         15566666666665      236999999999999999999999932    


Q ss_pred             CceEEEECCCCCccccchhhHHhh
Q 017102          326 SMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       326 ~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                          ++..+++|+++.|.||+++|
T Consensus       253 ----~v~~~~~p~~a~a~Gaal~a  272 (272)
T 3h1q_A          253 ----EVQVPIHPLLVTPLGIALFG  272 (272)
T ss_dssp             ----CCBCCSSGGGHHHHHHHTTC
T ss_pred             ----CccccCChHHHHHHHHHhcC
Confidence                33446789999999999875

>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1

Probab=99.91  E-value=9.4e-25  Score=208.02  Aligned_cols=304  Identities=16%  Similarity=0.169  Sum_probs=194.5

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCC--------CCceEEeeCCCCccccCCCccceeccchhccc------Ccceee---
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR------GILTLK---   70 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~------~~~~~~---   70 (377)
                      ..|.||+||+++.+++..+..|..+        +||+++...+         ...++|.+|....      ....++   
T Consensus         3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~---------~~~~~G~~A~~~~~~~~~~~~~~~k~~l   73 (383)
T 1dkg_D            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI   73 (383)
T ss_dssp             CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTT---------SCEEESHHHHTTSTTCGGGEEECGGGTT
T ss_pred             cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECC---------CCEEECHHHHHhhhhCccceeehhHHhh
Confidence            4789999999999998865544433        5777665332         2344665544320      000011   


Q ss_pred             ---------------cccc-------------CCccCCH-HHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHH
Q 017102           71 ---------------YPIE-------------HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR  118 (377)
Q Consensus        71 ---------------~p~~-------------~g~i~~~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~  118 (377)
                                     +|+.             +|..... +....+++++..   ..++  .....+++++|..++..+|
T Consensus        74 g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r  151 (383)
T 1dkg_D           74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR  151 (383)
T ss_dssp             TCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHH
T ss_pred             CCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHH
Confidence                           1221             2322222 333445555431   1222  2336799999999999999


Q ss_pred             HHHHhhhcccCCCCeEEeechhhhhhhhcCCc------eEEEEeCCCCceEEEEeeCC------eec-CCceEEEcccHH
Q 017102          119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRT------TGIVLDSGDGVSHTVPIYEG------YAL-PHAILRLDLAGR  185 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~------~~lVVDiG~~~t~v~pv~~g------~~l-~~~~~~~~~GG~  185 (377)
                      +.+.+++ +.+|++.+.++++|.||+++++..      +.+|+|+|+++|+++.+..+      ... .......++||.
T Consensus       152 ~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~  230 (383)
T 1dkg_D          152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE  230 (383)
T ss_dssp             HHHHHHH-HHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHH
T ss_pred             HHHHHHH-HHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHH
Confidence            9988875 889999999999999999988753      68999999999999988754      221 112345699999


Q ss_pred             HHHHHHHHHHHhc-----CCCccChh-----HHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCC-c--eEee
Q 017102          186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDG-Q--VITI  252 (377)
Q Consensus       186 ~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~-~--~i~i  252 (377)
                      ++++.|.+++.++     +.++....     -...++++|++++.....          .-..+..+..++| .  .+.+
T Consensus       231 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~----------~i~i~~~~~~~~G~~~~~~~i  300 (383)
T 1dkg_D          231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT----------DVNLPYITADATGPKHMNIKV  300 (383)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEE----------EEEEEEEEEETTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCce----------EEEEecccccCCCCeeEEEEE
Confidence            9999999988654     44432211     135677888887753100          0000011223344 2  2244


Q ss_pred             CCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEE
Q 017102          253 GAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVV  332 (377)
Q Consensus       253 ~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~  332 (377)
                      +.+++.   .+|+|..     ..+.+.|.++|.++..  ....+++|+||||+|++|++.++|++++..        ++.
T Consensus       301 t~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~  362 (383)
T 1dkg_D          301 TRAKLE---SLVEDLV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPR  362 (383)
T ss_dssp             EHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCB
T ss_pred             eHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCC
Confidence            443332   2333311     1266777778877652  345568999999999999999999999942        234


Q ss_pred             CCCCCccccchhhHHhhcc
Q 017102          333 APPERKYSVWIGGSILASL  351 (377)
Q Consensus       333 ~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+.+|.+++|.||+++|.+
T Consensus       363 ~~~~p~~ava~Gaa~~a~~  381 (383)
T 1dkg_D          363 KDVNPDEAVAIGAAVQGGV  381 (383)
T ss_dssp             CSSCTTTHHHHHHHHHTTT
T ss_pred             CCcChHHHHHHHHHHHHHh
Confidence            5678999999999999875

>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...

Probab=99.88  E-value=5.7e-23  Score=197.07  Aligned_cols=302  Identities=17%  Similarity=0.170  Sum_probs=183.7

Q ss_pred             CCCcEEEeCCCCceEEeeeCCCCCCC--------CCCceEEeeCCCCccccCCCccceeccchhccc--CcceeeccccC
Q 017102            6 DIQPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--GILTLKYPIEH   75 (377)
Q Consensus         6 ~~~~vvID~Gs~~~k~G~~~~~~P~~--------~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~--~~~~~~~p~~~   75 (377)
                      ...+|.||+||+++++++..+..|..        .+||+++..          ....++|.+|....  ......+.+++
T Consensus        22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~Kr   91 (404)
T 3i33_A           22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT----------DTERLIGDAAKNQVAMNPTNTIFDAKR   91 (404)
T ss_dssp             -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEEC----------SSCEEETHHHHHTTTTCSTTEECCGGG
T ss_pred             cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEEC----------CCCEEecHHHHHhhHhChhhhHHHHHH
Confidence            35689999999999999987665542        335555432          23466787765431  11111122221


Q ss_pred             Ccc--------------------------------------CC-HHHHHHHHHHhc---ccccccCCCCCcEEEEeCCCC
Q 017102           76 GIV--------------------------------------SN-WDDMEKIWHHTF---YNELRVAPEEHPILLTEAPLN  113 (377)
Q Consensus        76 g~i--------------------------------------~~-~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~  113 (377)
                      ..-                                      .. .+....+++++.   ...++  .....+++++|..+
T Consensus        92 ~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~--~~~~~~vitvPa~~  169 (404)
T 3i33_A           92 LIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLG--GKVHSAVITVPAYF  169 (404)
T ss_dssp             TTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEEEECTTC
T ss_pred             HhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhc--cCCCcEEEEECCCC
Confidence            111                                      11 122333444432   11222  23457999999999


Q ss_pred             CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc---------eEEEEeCCCCceEEEEee--CCee-cCCceEEEc
Q 017102          114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT---------TGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLD  181 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~---------~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~  181 (377)
                      +..+|+.+.+++ +.+|++.+.++++|.||+++++..         +.+|+|+|+++|+++.+.  ++.. +.......+
T Consensus       170 ~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~  248 (404)
T 3i33_A          170 NDSQRQATKDAG-TITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH  248 (404)
T ss_dssp             CHHHHHHHHHHH-HHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETT
T ss_pred             CHHHHHHHHHHH-HHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCC
Confidence            999999887775 889999999999999999988643         459999999999998774  4332 222334579


Q ss_pred             ccHHHHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEc---CCCc
Q 017102          182 LAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQ  248 (377)
Q Consensus       182 ~GG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---pd~~  248 (377)
                      +||.++++.+.+++.++     +........     ...+++.|+.++..                ....+.+   .++.
T Consensus       249 lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~g~  312 (404)
T 3i33_A          249 LGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSS----------------TQASIEIDSLYEGV  312 (404)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTS----------------SEEEEEEEEEETTE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcC----------------cceEEEEeeccCCc
Confidence            99999999999888432     222211100     13345555544321                1112221   1333


Q ss_pred             eEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCce
Q 017102          249 VITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMK  328 (377)
Q Consensus       249 ~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~  328 (377)
                      .+.+.-.|..+ |-++.|-     ...+.+.|.+.|.....  ....++.|+||||+|++|++.++|++.+...      
T Consensus       313 ~~~~~i~r~~~-~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~------  378 (404)
T 3i33_A          313 DFYTSITRARF-EELNADL-----FRGTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK------  378 (404)
T ss_dssp             EEEEEEEHHHH-HHHTHHH-----HHHTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHHHHHHHHHTTTC------
T ss_pred             eeEEEEcHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHHHHHHHHHcCCC------
Confidence            33322222222 2222220     11145566666665432  2345688999999999999999999887321      


Q ss_pred             EEEECCCCCccccchhhHHhhcc
Q 017102          329 IKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       329 v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                       ++..+.+|..+++.||+++|.+
T Consensus       379 -~v~~~~~p~~ava~Gaa~~a~~  400 (404)
T 3i33_A          379 -ELNKSINPDEAVAYGAAVQAAI  400 (404)
T ss_dssp             -CCBCSSCTTTHHHHHHHHHHHH
T ss_pred             -CCCCCcCHHHHHHHHHHHHHHH
Confidence             2345678999999999999875

>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}

Probab=99.85  E-value=4e-21  Score=192.57  Aligned_cols=298  Identities=17%  Similarity=0.208  Sum_probs=188.6

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCC--------CCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeec--
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKY--   71 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~--------~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~--   71 (377)
                      ..|.||+||+++.+++..+..|.+        .+||+++...+         ...++|.+|...      +..+.+++  
T Consensus         3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~t~~~~Kr~i   73 (605)
T 2kho_A            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GETLVGQPAKRQAVTNPQNTLFAIKRLI   73 (605)
T ss_dssp             -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTT---------SCEEESHHHHTTTTTCGGGEEECGGGTT
T ss_pred             CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECC---------CcEEECHHHHHHhhhCCCCEeehhhHhh
Confidence            589999999999999886554442        35777665322         234566665432      01111111  


Q ss_pred             ----------------ccc-------------CCccCCH-HHHHHHHHHhcc---cccccCCCCCcEEEEeCCCCCHHHH
Q 017102           72 ----------------PIE-------------HGIVSNW-DDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR  118 (377)
Q Consensus        72 ----------------p~~-------------~g~i~~~-~~~~~~~~~~~~---~~L~~~~~~~~vvl~~p~~~~~~~~  118 (377)
                                      |++             .|..... +....+++++..   ..++  ..-..+++++|..++..+|
T Consensus        74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~--~~v~~~VitVPa~f~d~qr  151 (605)
T 2kho_A           74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQR  151 (605)
T ss_dssp             TCBSSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHC--SCCCEEEEEECTTCCHHHH
T ss_pred             CCCCCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhC--CCCcEEEEEECCCCCHHHH
Confidence                            221             2222222 233444444421   2233  2235799999999999999


Q ss_pred             HHHHhhhcccCCCCeEEeechhhhhhhhcCC------ceEEEEeCCCCceEEEEee------CCee-cCCceEEEcccHH
Q 017102          119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIY------EGYA-LPHAILRLDLAGR  185 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~pv~------~g~~-l~~~~~~~~~GG~  185 (377)
                      +.+.+++ +.+|++.+.++++|.||++++|.      .+.+|+|+|+++++|+.+.      +|.. +.......++||.
T Consensus       152 ~a~~~A~-~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~  230 (605)
T 2kho_A          152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGE  230 (605)
T ss_dssp             HHHHHHH-HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGG
T ss_pred             HHHHHHH-HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHH
Confidence            9888776 88999999999999999998874      3479999999999999886      3432 2222345689999


Q ss_pred             HHHHHHHHHHHhc-----CCCccChh-----HHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcC------CC-c
Q 017102          186 DLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG-Q  248 (377)
Q Consensus       186 ~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p------d~-~  248 (377)
                      ++++.|.+++.++     +.++....     -...++++|+.++...                ...+.+|      +| .
T Consensus       231 d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~  294 (605)
T 2kho_A          231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ----------------QTDVNLPYITADATGPK  294 (605)
T ss_dssp             GTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------EEEEEEEEEEEETTEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEecccccCCCCce
Confidence            9999999888643     33332211     1244666777665321                1122222      23 1


Q ss_pred             eE--eeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCC
Q 017102          249 VI--TIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSS  326 (377)
Q Consensus       249 ~i--~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~  326 (377)
                      .+  .++.+.|   |-++.|-     ...+.+.|.++|.....  ....++.|+||||+|++|++.++|++.+..     
T Consensus       295 ~~~~~itr~~f---e~l~~~~-----~~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg~-----  359 (605)
T 2kho_A          295 HMNIKVTRAKL---ESLVEDL-----VNRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK-----  359 (605)
T ss_dssp             EEEEEEEHHHH---HTTCCST-----TGGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHSS-----
T ss_pred             EEEEEEeHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHHHhcCC-----
Confidence            22  3333332   2233331     12267788888877642  234568999999999999999999988842     


Q ss_pred             ceEEEECCCCCccccchhhHHhhcc
Q 017102          327 MKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       327 ~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                         .+..+.+|..+++.||+++|..
T Consensus       360 ---~~~~~~npd~aVA~GAa~~a~~  381 (605)
T 2kho_A          360 ---EPRKDVNPDEAVAIGAAVQGGV  381 (605)
T ss_dssp             ---CCBCSSCTTTHHHHHHHHHHTT
T ss_pred             ---CcCcCCCcchHHHHHHHHHHHH
Confidence               1234568899999999999874

>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*

Probab=99.84  E-value=9.9e-21  Score=187.93  Aligned_cols=213  Identities=16%  Similarity=0.211  Sum_probs=145.7

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-------ceEEEEeCCCCceEEEEee--CCee-
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYA-  172 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lVVDiG~~~t~v~pv~--~g~~-  172 (377)
                      ..+++++|..++..+|+.+.+++ +.+|++.+.++++|.||+++++.       .+.+|+|+|+++++++.+.  +|.. 
T Consensus       140 ~~~VitVPa~f~~~qr~a~~~A~-~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~  218 (554)
T 1yuw_A          140 TNAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE  218 (554)
T ss_dssp             CEEEEEECTTCCHHHHHHHHHHH-HTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred             CeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence            57999999999999999888765 88999999999999999998873       4689999999999999886  6754 


Q ss_pred             cCCceEEEcccHHHHHHHHHHHHHh-----cCCCccChh-----HHHHHHHHhHhcceeecCHHHHHHHhccCCCccceE
Q 017102          173 LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY  242 (377)
Q Consensus       173 l~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~  242 (377)
                      +.......++||+++++.|.+++.+     .+.++....     -...++++|+.++...                ...+
T Consensus       219 v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~----------------~~~i  282 (554)
T 1yuw_A          219 VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST----------------QASI  282 (554)
T ss_dssp             EEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS----------------EEEE
T ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc----------------eEEE
Confidence            2334446799999999999988753     233332211     1244666666655321                1223


Q ss_pred             EcC---CCceEe--eCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHH
Q 017102          243 ELP---DGQVIT--IGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMS  316 (377)
Q Consensus       243 ~~p---d~~~i~--i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~  316 (377)
                      .++   +|....  ++.+.+. ..+.+|..         +.+.|.++|....  +.+..++.|+||||+|++|++.++|+
T Consensus       283 ~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~---------i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~  351 (554)
T 1yuw_A          283 EIDSLYEGIDFYTSITRARFEELNADLFRG---------TLDPVEKALRDAK--LDKSQIHDIVLVGGSTRIPKIQKLLQ  351 (554)
T ss_dssp             EETTCSSSCCEEEEEEHHHHHHHTHHHHHH---------TTHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred             EEeeccCCceEEEEEEHHHHHHHHHHHHHH---------HHHHHHHHHHHcC--CChhhCcEEEEECCcccChHHHHHHH
Confidence            332   333222  2222221 11222222         4456666666542  22345689999999999999999999


Q ss_pred             HHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          317 KEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       317 ~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +.+...       ++..+.+|..+++.||+++|.
T Consensus       352 ~~f~~~-------~v~~~~np~~aVA~Gaa~~a~  378 (554)
T 1yuw_A          352 DFFNGK-------ELNKSINPDEAVAYGAAVQAA  378 (554)
T ss_dssp             HHTTTC-------CCBCCSCTTTHHHHHHHHHHH
T ss_pred             HHcCCC-------ccccCCCchhHHHHHHHHHHH
Confidence            877432       233456889999999999986

>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*

Probab=99.83  E-value=1.2e-20  Score=190.66  Aligned_cols=213  Identities=10%  Similarity=0.176  Sum_probs=146.4

Q ss_pred             CcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC------------ceEEEEeCCCCceEEEEee--
Q 017102          103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVSHTVPIY--  168 (377)
Q Consensus       103 ~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~~~lVVDiG~~~t~v~pv~--  168 (377)
                      ..+++++|..++..+|+.+.+.+ +.+|++.+.++++|.||++++|.            .+.+|+|+|+++++|+.+.  
T Consensus       139 ~~~VITVPa~f~~~qR~a~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~  217 (675)
T 3d2f_A          139 TDVCIAVPPWYTEEQRYNIADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK  217 (675)
T ss_dssp             CEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred             ceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence            57999999999999999988876 88999999999999999987642            4689999999999999875  


Q ss_pred             CCee-cCCceEEEcccHHHHHHHHHHHHHh-----cCCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCC
Q 017102          169 EGYA-LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSA  237 (377)
Q Consensus       169 ~g~~-l~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~  237 (377)
                      +|.. +.......++||.++++.|.+++..     .+.++.....     ...++.+|+.++...               
T Consensus       218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~---------------  282 (675)
T 3d2f_A          218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT---------------  282 (675)
T ss_dssp             TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS---------------
T ss_pred             CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC---------------
Confidence            6654 3333345799999999999998853     2333221110     244666666554210               


Q ss_pred             ccceEEcC---CCce--EeeCCcccc-ccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCCh
Q 017102          238 VEKSYELP---DGQV--ITIGAERFR-CPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI  311 (377)
Q Consensus       238 ~~~~~~~p---d~~~--i~i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~  311 (377)
                       ...+.++   ++..  +.++.+.|. +.+.++..         +.+.|.++|.....  ...-++.|+||||+|++|++
T Consensus       283 -~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~---------i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~v  350 (675)
T 3d2f_A          283 -NAPFSVESVMNDVDVSSQLSREELEELVKPLLER---------VTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPTL  350 (675)
T ss_dssp             -EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTT---------TTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHHH
T ss_pred             -ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHH---------HHHHHHHHHHHhCC--ChhhCcEEEEECCCccChHH
Confidence             1122222   1222  233333322 22333333         66677777765431  12345799999999999999


Q ss_pred             HHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          312 ADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       312 ~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .++|++.+..        .+..+.+|..+++.||+++|..
T Consensus       351 ~~~l~~~fg~--------~~~~~~nPdeaVA~GAa~~a~~  382 (675)
T 3d2f_A          351 KQSISEAFGK--------PLSTTLNQDEAIAKGAAFICAI  382 (675)
T ss_dssp             HHHHHHHHTS--------CEECCSCTTTHHHHHHHHHHHH
T ss_pred             HHHHHHhcCC--------CccccCCcchHHHHHHHHHHHH
Confidence            9999988842        2345678899999999999863

>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}

Probab=99.82  E-value=1.5e-20  Score=180.58  Aligned_cols=221  Identities=14%  Similarity=0.169  Sum_probs=141.9

Q ss_pred             CCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc--------eEEEEeCCCCceEEEEe--eCC
Q 017102          101 EEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPI--YEG  170 (377)
Q Consensus       101 ~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~--------~~lVVDiG~~~t~v~pv--~~g  170 (377)
                      ....+++++|..++..+|+.+.+.+ +..|++.+.++++|.||+++++..        +.+|+|+|+++|+++.+  .+|
T Consensus       149 ~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~  227 (409)
T 4gni_A          149 KVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSG  227 (409)
T ss_dssp             CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETT
T ss_pred             CCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCC
Confidence            3467999999999999999888777 889999999999999999998764        58999999999999875  333


Q ss_pred             ee-cCCceEEEcccHHHHHHHHHHHHHhc-----C--CCccChh-H----HHHHHHHhHhcceeecCHHHHHHHhccCCC
Q 017102          171 YA-LPHAILRLDLAGRDLTDALMKILTER-----G--YSFTTTA-E----REIVRDMKEKLAYIALDYEQELETAKTSSA  237 (377)
Q Consensus       171 ~~-l~~~~~~~~~GG~~l~~~l~~~l~~~-----~--~~~~~~~-~----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~  237 (377)
                      .. +.......++||.++++.|.+++..+     +  .+..... .    ...++.+|+.++..                
T Consensus       228 ~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------  291 (409)
T 4gni_A          228 MYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRS----------------  291 (409)
T ss_dssp             EEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHS----------------
T ss_pred             eEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCC----------------
Confidence            21 11222357999999999999888642     1  1111100 0    12345555543311                


Q ss_pred             ccceEEc---CCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHH
Q 017102          238 VEKSYEL---PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR  314 (377)
Q Consensus       238 ~~~~~~~---pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~r  314 (377)
                      ....+.+   .++....+.-.|..+ |-++.|-     ...+.+.|.+.|.+..  .....++.|+||||+|++|++.++
T Consensus       292 ~~~~i~i~~~~~~~~~~~~itr~~~-~~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~V~LvGG~s~~p~v~~~  363 (409)
T 4gni_A          292 TNASFSVESLIDGLDFASTINRLRY-ETIARTV-----FEGFNRLVESAVKKAG--LDPLDVDEVIMSGGTSNTPRIAAN  363 (409)
T ss_dssp             SEEEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHHHHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHH
T ss_pred             CceEEEeecccCCcceEEEeeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcC--CCHHHCCEEEEECCccccHHHHHH
Confidence            0111222   123322222222222 2223330     0114555556665442  223456889999999999999999


Q ss_pred             HHHHHhhhCCCCceEEE------ECCCCCccccchhhHHhhccc
Q 017102          315 MSKEISALAPSSMKIKV------VAPPERKYSVWIGGSILASLS  352 (377)
Q Consensus       315 l~~el~~~~~~~~~v~v------~~~~~~~~~~w~Gasi~a~l~  352 (377)
                      |++.+..      ++++      ....+|..++-.||++++...
T Consensus       364 l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~  401 (409)
T 4gni_A          364 FRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLI  401 (409)
T ss_dssp             HHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred             HHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence            9877733      2345      234588999999999998764

>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D

Probab=99.77  E-value=3.8e-19  Score=178.27  Aligned_cols=304  Identities=17%  Similarity=0.168  Sum_probs=179.4

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCC--------CCCCceEEeeCCCCccccCCCccceeccchhcc------cCcceeeccc
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPR--------AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK------RGILTLKYPI   73 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~--------~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~------~~~~~~~~p~   73 (377)
                      .+|.||+||+++.+++..+..|.        ..+||+++...+         ...++|.+|...      ...+.+++.+
T Consensus         3 ~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~---------~~~~vG~~A~~~~~~~p~~ti~~~Krll   73 (605)
T 4b9q_A            3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQD---------GCTLVGQPAKRQAVTNPQNTLFAIKRLI   73 (605)
T ss_dssp             CEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTT---------SCEEESHHHHHTTTTCGGGEECCGGGTT
T ss_pred             cEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCC---------CcEEecHHHHHHHHhCCCcEehhhHHhh
Confidence            57999999999999987554443        344666655422         235567665432      1111222222


Q ss_pred             cC-------------------------------CccCC-HHHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHH
Q 017102           74 EH-------------------------------GIVSN-WDDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANR  118 (377)
Q Consensus        74 ~~-------------------------------g~i~~-~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~  118 (377)
                      ..                               |.... .+....+++++.   ...|+.  .-..+++++|..++..+|
T Consensus        74 G~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr  151 (605)
T 4b9q_A           74 GRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQR  151 (605)
T ss_dssp             TCBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHH
T ss_pred             CCCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHH
Confidence            11                               11112 233344444443   123332  335799999999999999


Q ss_pred             HHHHhhhcccCCCCeEEeechhhhhhhhcCC------ceEEEEeCCCCceEEEEeeCCe------e-cCCceEEEcccHH
Q 017102          119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVSHTVPIYEGY------A-LPHAILRLDLAGR  185 (377)
Q Consensus       119 ~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~~~lVVDiG~~~t~v~pv~~g~------~-l~~~~~~~~~GG~  185 (377)
                      +.+.+++ +..|++.+.++++|.||++++|.      .+.+|+|+|+++++++.+.-+.      . +.......++||.
T Consensus       152 ~a~~~Aa-~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~  230 (605)
T 4b9q_A          152 QATKDAG-RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGE  230 (605)
T ss_dssp             HHHHHHH-HHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHH
T ss_pred             HHHHHHH-HHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChH
Confidence            8877776 88999999999999999998863      4679999999999999876433      1 1122234688999


Q ss_pred             HHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC---CceEee
Q 017102          186 DLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD---GQVITI  252 (377)
Q Consensus       186 ~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd---~~~i~i  252 (377)
                      ++++.+.+++..+     +.+......     ...++.+|..++....            ......+...+   +..+.+
T Consensus       231 d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~------------~~i~~~~~~~~~~g~~~~~~  298 (605)
T 4b9q_A          231 DFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ------------TDVNLPYITADATGPKHMNI  298 (605)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSE------------EEEEEEEEEECSSSEEEEEE
T ss_pred             HHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCC------------eEEEEeeeccCCCCCeeEEE
Confidence            9999999888642     222211111     2335555555442110            00011111111   112222


Q ss_pred             CCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEE
Q 017102          253 GAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVV  332 (377)
Q Consensus       253 ~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~  332 (377)
                      .-.|..+ |-++.|-     ...+.+.|.+++.....  ...-++.|+||||+|++|++.+++++.+..        .+.
T Consensus       299 ~itr~~~-e~l~~~~-----~~~i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~~~l~~~fg~--------~~~  362 (605)
T 4b9q_A          299 KVTRAKL-ESLVEDL-----VNRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPR  362 (605)
T ss_dssp             EEEHHHH-HHHHHHH-----HHHTTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------CCC
T ss_pred             EEeHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHHHHHHHHhcc--------CcC
Confidence            2122222 1122220     00134455555554321  223457899999999999999999988832        123


Q ss_pred             CCCCCccccchhhHHhhcc
Q 017102          333 APPERKYSVWIGGSILASL  351 (377)
Q Consensus       333 ~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+.+|..++-.||+++|..
T Consensus       363 ~~~nPdeaVA~GAai~a~~  381 (605)
T 4b9q_A          363 KDVNPDEAVAIGAAVQGGV  381 (605)
T ss_dssp             SSSCTTTHHHHHHHHHHHH
T ss_pred             CCcChhHHHHHhHHHHHHH
Confidence            4567899999999999864

>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}

Probab=99.73  E-value=2.3e-17  Score=156.59  Aligned_cols=173  Identities=16%  Similarity=0.231  Sum_probs=109.1

Q ss_pred             HHHHHHhhhcccCCCCeEEeechhhhhhhhcC-------CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHH
Q 017102          117 NREKMTQIMFETFNAPAMYVAIQAVLSLYASG-------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD  189 (377)
Q Consensus       117 ~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-------~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~  189 (377)
                      ..+.+.+++ +.+|++.+.+..+|+|++.+++       ..+.+|||+|+++|+++.+.+|.++  .....++||.++++
T Consensus       152 ~v~~~~~~~-~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~--~~~~~~~GG~~i~~  228 (377)
T 2ych_A          152 AVAGVLEAL-RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPL--AVRVLTLSGKDFTE  228 (377)
T ss_dssp             HHHHHHHHH-HHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHH
T ss_pred             HHHHHHHHH-HHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEE--EEEeeechHHHHHH
Confidence            345555555 8899999999999999998864       2456999999999999999999887  56788999999999


Q ss_pred             HHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCC
Q 017102          190 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMI  269 (377)
Q Consensus       190 ~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~  269 (377)
                      .+.+.+   +.      +.+.++++|.++++...+..++          ...+.+++ ..+.++.+.  +.|++ .|   
T Consensus       229 ~i~~~~---~~------~~~~aE~~K~~~~~~~~~~~~~----------~~~i~~~~-~~~~i~~~~--~~~~i-~~---  282 (377)
T 2ych_A          229 AIARSF---NL------DLLAAEEVKRTYGMATLPTEDE----------ELLLDFDA-ERERYSPGR--IYDAI-RP---  282 (377)
T ss_dssp             HHHHHT---TC------CHHHHHHHHHHTC------------------------------------C--HHHHH-HH---
T ss_pred             HHHHHh---CC------CHHHHHHHHhhccccccccccc----------cccccccc-ccccCCHHH--HHHHH-HH---
Confidence            988743   22      2456899999988754321110          00111221 111222111  11111 11   


Q ss_pred             CCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHh
Q 017102          270 GMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIS  320 (377)
Q Consensus       270 ~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~  320 (377)
                        ....+.+.|.++|..++...+....++|+||||+|++||+.+++++++.
T Consensus       283 --~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~  331 (377)
T 2ych_A          283 --VLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG  331 (377)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred             --HHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence              0011455566666555444555678899999999999999999999994

>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*

Probab=99.72  E-value=1.1e-17  Score=156.67  Aligned_cols=177  Identities=15%  Similarity=0.129  Sum_probs=125.2

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCcccc------C--------CCccceeccchhcccCcceeecccc
Q 017102            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG------M--------GQKDAYVGDEAQSKRGILTLKYPIE   74 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~------~--------~~~~~~vg~~~~~~~~~~~~~~p~~   74 (377)
                      .+.||+|+.++|+-. ++ .-...+||.++........++      .        .+..+.||++|.         +|++
T Consensus        23 ~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l~   91 (346)
T 2fsj_A           23 VVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQG   91 (346)
T ss_dssp             EEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCSS
T ss_pred             EEEEecCCcceeEEe-cC-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------cccC
Confidence            689999999999863 33 224468898876654321100      0        134566776653         8899


Q ss_pred             CCccCCHHHHHHHHHHhccccc-ccCCCCCcEE--EEeCCCCCHHHHHHHHhhhccc-------------CCCCeEEeec
Q 017102           75 HGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPIL--LTEAPLNPKANREKMTQIMFET-------------FNAPAMYVAI  138 (377)
Q Consensus        75 ~g~i~~~~~~~~~~~~~~~~~L-~~~~~~~~vv--l~~p~~~~~~~~~~l~~~lfe~-------------~~~~~v~~~~  138 (377)
                      .+.+.+ +..+.++.+.+.+.. ........++  ++.|......+|+.+.+.+...             +++..|.+++
T Consensus        92 ~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~  170 (346)
T 2fsj_A           92 DGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRP  170 (346)
T ss_dssp             TTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEE
T ss_pred             CCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEc
Confidence            999988 666666666653322 1112335689  9999988888888888876432             1356799999


Q ss_pred             hhhhhhhhc--C-----C-ceEEEEeCCCCceEEEEee--CCeecCCceEEEcccHHHHHHHHHHHHHh
Q 017102          139 QAVLSLYAS--G-----R-TTGIVLDSGDGVSHTVPIY--EGYALPHAILRLDLAGRDLTDALMKILTE  197 (377)
Q Consensus       139 ~~~~a~~~~--g-----~-~~~lVVDiG~~~t~v~pv~--~g~~l~~~~~~~~~GG~~l~~~l~~~l~~  197 (377)
                      +|.+|++++  +     . .+.+|||+|+++|+++.+.  +|.++.......++||+++++++.+.+++
T Consensus       171 Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~  239 (346)
T 2fsj_A          171 QGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAK  239 (346)
T ss_dssp             TTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHH
Confidence            999999974  2     1 4559999999999999998  78766655678899999999999887754

>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*

Probab=99.64  E-value=1.6e-15  Score=145.17  Aligned_cols=200  Identities=12%  Similarity=0.151  Sum_probs=131.9

Q ss_pred             CHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102          114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       114 ~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~  188 (377)
                      ++...+.+.+++ +..|+....++.+|+|+++++..     .+.+|||+|+++|+++.+.+|.+.  .....++||++++
T Consensus       166 ~~~~v~n~~~~~-~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~--~~~~i~~GG~~it  242 (419)
T 4a2a_A          166 PLKVYEMFYNFL-QDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVI  242 (419)
T ss_dssp             EHHHHHHHHHHH-HTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEE--EEEEESCCHHHHH
T ss_pred             eHHHHHHHHHHH-HHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEE--EEEecccHHHHHH
Confidence            344556666665 88999999999999999998765     368999999999999999999988  5678999999999


Q ss_pred             HHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHHhccCCCccceEEcCC--C-ceEeeCCccc-cccccCC
Q 017102          189 DALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QVITIGAERF-RCPEVLF  264 (377)
Q Consensus       189 ~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd--~-~~i~i~~~~~-~~~e~lf  264 (377)
                      +.+.+.+.         ...+.+|++|.+++......           .....+.+|.  + ....++...+ .+.+..+
T Consensus       243 ~dIa~~l~---------~~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~v  302 (419)
T 4a2a_A          243 KDVSAVLD---------TSFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARL  302 (419)
T ss_dssp             HHHHHHHT---------CCHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHC---------CCHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHH
Confidence            99988762         13467999999887542210           0111222221  1 1122221111 1111111


Q ss_pred             CCCCCCCCCCChhHHHHHHHhcCCH----HHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEEC-----C-
Q 017102          265 QPSMIGMESAGIHETTYNSIMKCDV----DIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA-----P-  334 (377)
Q Consensus       265 ~p~~~~~~~~~l~~~I~~~i~~~~~----~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~-----~-  334 (377)
                      +.         +.+.|.+.|.....    .......+.|+||||+|++||+.+.+++.+..      ++++..     | 
T Consensus       303 ee---------i~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~------~vri~~~~~~~p~  367 (419)
T 4a2a_A          303 RE---------IMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS------PVRTGCYANSDRP  367 (419)
T ss_dssp             HH---------HHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS------CEEECCGGGSSSC
T ss_pred             HH---------HHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC------CeEEEecCCCCch
Confidence            11         45556666655432    11345678899999999999999999999843      455554     3 


Q ss_pred             ---------CCCccccchhhHHhhcc
Q 017102          335 ---------PERKYSVWIGGSILASL  351 (377)
Q Consensus       335 ---------~~~~~~~w~Gasi~a~l  351 (377)
                               .+|.|+.-.|-.+++..
T Consensus       368 ~~~~~~~~~~~P~~~t~~Gl~~~~~~  393 (419)
T 4a2a_A          368 SIINADEVANDPSFAAAFGNVFAVSE  393 (419)
T ss_dssp             CCBTCHHHHTCGGGHHHHHTTCC---
T ss_pred             hccCcccccCCchHHHHHHHHHHHhh
Confidence                     36788888888777754

>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A

Probab=99.52  E-value=2.3e-14  Score=132.69  Aligned_cols=179  Identities=12%  Similarity=0.120  Sum_probs=106.8

Q ss_pred             cccCCCCeEEeechhhhhhhhcC-----CceEEEEeCCCCceEEEEeeCCee-cCCceEEEcccHHHHHHHHHHHHHhcC
Q 017102          126 FETFNAPAMYVAIQAVLSLYASG-----RTTGIVLDSGDGVSHTVPIYEGYA-LPHAILRLDLAGRDLTDALMKILTERG  199 (377)
Q Consensus       126 fe~~~~~~v~~~~~~~~a~~~~g-----~~~~lVVDiG~~~t~v~pv~~g~~-l~~~~~~~~~GG~~l~~~l~~~l~~~~  199 (377)
                      .+.+++..+.++++|++|+++++     ..+.+|||+|+++|+++.+.+|.+ +.......++||.++++.+.+.+.+++
T Consensus       135 ~~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~  214 (320)
T 2zgy_A          135 GDTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR  214 (320)
T ss_dssp             BCCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCS
T ss_pred             CcEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcC
Confidence            34566789999999999998763     357899999999999999999876 433456779999999999999886543


Q ss_pred             CCccChhHHHHHHHH-hHhcceeecCHHHHHHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhH
Q 017102          200 YSFTTTAEREIVRDM-KEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHE  278 (377)
Q Consensus       200 ~~~~~~~~~~~~~~i-k~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~  278 (377)
                      ..+    ....++++ |.+....   +.   ....         ..|.        ......+. +.+     -...+.+
T Consensus       215 ~~i----~~~~ae~~lk~~~~~~---~~---~~~i---------~~~~--------~~~~~~~~-i~~-----~~~~~~~  261 (320)
T 2zgy_A          215 TKG----SSYLADDIIIHRKDNN---YL---KQRI---------NDEN--------KISIVTEA-MNE-----ALRKLEQ  261 (320)
T ss_dssp             BGG----GHHHHHHHHHTTTCHH---HH---HHHS---------SSSC--------THHHHHHH-HHH-----HHHHHHH
T ss_pred             CCC----CHHHHHHHHHHhhhhh---cc---ccee---------cCch--------hhHHHHHH-HHH-----HHHHHHH
Confidence            222    23456666 5441100   00   0000         0000        00000000 000     0001233


Q ss_pred             HHHHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          279 TTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       279 ~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      .|.+.+.+.      ...+.|+||||+|.+  +.+.|+    +.++... -++..+++|+++.-.|+.++++
T Consensus       262 ~i~~~i~~~------~~~~~vvl~GGga~l--l~~~l~----~~~~~~~-~~~~~~~~P~~a~A~G~~~~~~  320 (320)
T 2zgy_A          262 RVLNTLNEF------SGYTHVMVIGGGAEL--ICDAVK----KHTQIRD-ERFFKTNNSQYDLVNGMYLIGN  320 (320)
T ss_dssp             HHHHHHTTC------CCCCEEEEESTTHHH--HHHHHH----HTSCCCG-GGEECCSCGGGHHHHHHHHHHC
T ss_pred             HHHHHHHhh------cCCCeEEEECChHHH--HHHHHH----HHhCCCC-CceeeCCCcHHHHHHHHHHhcC
Confidence            333344332      234789999999987  554444    4443210 0244567899999999998863

>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}

Probab=99.47  E-value=2.4e-14  Score=132.86  Aligned_cols=185  Identities=12%  Similarity=0.057  Sum_probs=115.4

Q ss_pred             CCCCCCcEEEeCCCCceEEeee--C---CCCCCCCCCceEEeeCCCC-------ccccCCCccceeccchhcccCcceee
Q 017102            3 DTEDIQPLVCDNGTGMVKAGFA--G---DDAPRAVFPSIVGRPRHTG-------VMVGMGQKDAYVGDEAQSKRGILTLK   70 (377)
Q Consensus         3 ~~~~~~~vvID~Gs~~~k~G~~--~---~~~P~~~~ps~~~~~~~~~-------~~~~~~~~~~~vg~~~~~~~~~~~~~   70 (377)
                      .+.+.-.|.||+|-.++|+-..  +   +..-+..|||.++......       ..+..++..++||+.+...       
T Consensus         3 ~~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~-------   75 (329)
T 4apw_A            3 NITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED-------   75 (329)
T ss_dssp             --CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC-------
T ss_pred             CccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc-------
Confidence            3445567899999999998753  2   1223457888876543311       1223456677888865321       


Q ss_pred             ccccCCccCCHHHHHHHHHHhcccccccC-CCCCcEEEEeCCCCCH--HHHHHHHhhhccc-------------CCCCeE
Q 017102           71 YPIEHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPILLTEAPLNPK--ANREKMTQIMFET-------------FNAPAM  134 (377)
Q Consensus        71 ~p~~~g~i~~~~~~~~~~~~~~~~~L~~~-~~~~~vvl~~p~~~~~--~~~~~l~~~lfe~-------------~~~~~v  134 (377)
                       -.......  +....++..++...+... ..+-.+++..|...-.  .+|+.+.+.+-..             +.+..|
T Consensus        76 -~~~~~k~~--~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v  152 (329)
T 4apw_A           76 -SSETSKTN--LIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDI  152 (329)
T ss_dssp             -SGGGCCCT--THHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEE
T ss_pred             -cccCCcCc--hhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEE
Confidence             11112211  234444444432334322 1223455666644332  2344555544321             224579


Q ss_pred             EeechhhhhhhhcC----CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHh
Q 017102          135 YVAIQAVLSLYASG----RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE  197 (377)
Q Consensus       135 ~~~~~~~~a~~~~g----~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~  197 (377)
                      .+.|++..|++...    ..+.+|||+|+++|+++.+.+|.++......+++||.++++.+.+.+.+
T Consensus       153 ~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~  219 (329)
T 4apw_A          153 TIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD  219 (329)
T ss_dssp             EEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred             EEEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence            99999999998762    3578999999999999999999998777778999999999999887754

>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}

Probab=99.44  E-value=1.7e-13  Score=128.27  Aligned_cols=185  Identities=14%  Similarity=0.161  Sum_probs=117.9

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc---------------cccCCCcc-ceeccchhcccCcceeec
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------------MVGMGQKD-AYVGDEAQSKRGILTLKY   71 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~---------------~~~~~~~~-~~vg~~~~~~~~~~~~~~   71 (377)
                      -.|.||+|-.++|+ ..++  -.+.|||.++...+...               .+..+... ++||+.|......  ..+
T Consensus         5 ~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~--~~~   79 (355)
T 3js6_A            5 YVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT--GKD   79 (355)
T ss_dssp             EEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC--CEE
T ss_pred             EEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc--ccc
Confidence            37899999999996 4444  24678998875433211               11123445 7889877543111  112


Q ss_pred             cc-cCCccCCHHHHHHHHHHhc---ccccccCCCCCcEEEEeCCCCCHHHH-HHHHhhhccc-----------CCCCeEE
Q 017102           72 PI-EHGIVSNWDDMEKIWHHTF---YNELRVAPEEHPILLTEAPLNPKANR-EKMTQIMFET-----------FNAPAMY  135 (377)
Q Consensus        72 p~-~~g~i~~~~~~~~~~~~~~---~~~L~~~~~~~~vvl~~p~~~~~~~~-~~l~~~lfe~-----------~~~~~v~  135 (377)
                      .+ ......+-+ ...++...+   ...+.....+-.+++..|......++ +.+.+.+...           +.+..|.
T Consensus        80 ~~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~  158 (355)
T 3js6_A           80 TASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVK  158 (355)
T ss_dssp             CCCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEE
T ss_pred             ccccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEE
Confidence            22 233443322 222222222   12121111123577778877665555 4666666432           2236899


Q ss_pred             eechhhhhhhhcC-----------CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhc
Q 017102          136 VAIQAVLSLYASG-----------RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER  198 (377)
Q Consensus       136 ~~~~~~~a~~~~g-----------~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~  198 (377)
                      ++++|.+|+++++           ..+.+|||+|+++|+++.+.+|.++.....++++||..+++.+.+.+.++
T Consensus       159 v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~  232 (355)
T 3js6_A          159 IVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK  232 (355)
T ss_dssp             EEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred             EEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence            9999999999875           35679999999999999999999987777889999999999999998654

>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A

Probab=98.87  E-value=3.8e-09  Score=100.65  Aligned_cols=180  Identities=12%  Similarity=0.114  Sum_probs=106.9

Q ss_pred             chhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHH
Q 017102          138 IQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR  212 (377)
Q Consensus       138 ~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~  212 (377)
                      -+|.||.+++=.     ...++||+|+++|+++.+.+|..+  +...+++||++++..+..-|.        ..+...+|
T Consensus       390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~gG~~VT~DIA~~Lg--------t~d~~~AE  459 (610)
T 2d0o_A          390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMIIARELG--------LEDRYLAE  459 (610)
T ss_dssp             EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHHHHHHHT--------CCCHHHHH
T ss_pred             ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence            677777776532     467899999999999999999988  778899999999999998882        12367899


Q ss_pred             HHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEee--CCc-cccccc-cCCCCCC-CCCCCCC--hhH--HHHHH
Q 017102          213 DMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPSM-IGMESAG--IHE--TTYNS  283 (377)
Q Consensus       213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i--~~~-~~~~~e-~lf~p~~-~~~~~~~--l~~--~I~~~  283 (377)
                      ++|. ++......           .   .....+...+++  ... ...++. .+..|+. ... .+.  +.+  ++.+.
T Consensus       460 rIK~-YG~A~ve~-----------l---f~~~dede~Iev~~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEElelVR~~  523 (610)
T 2d0o_A          460 EIKK-YPLAKVES-----------L---FHLRHEDGSVQFFSTPLPPAVFARVCVVKADELVPL-PGDLALEKVRAIRRS  523 (610)
T ss_dssp             HHHH-SCEEEECS-----------S---SEEEETTSCEEECSSCCCGGGTTCEEEECSSCEEEC-CTTCCHHHHHHHHHH
T ss_pred             Hhcc-cCceeecc-----------c---ccccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHHHHHHHHH
Confidence            9999 87654321           0   000001112222  000 000111 0000010 011 112  333  33333


Q ss_pred             HhcC---CHHHH-----Hhh-----hcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECC-----CCCccccchhh
Q 017102          284 IMKC---DVDIR-----KDL-----YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP-----PERKYSVWIGG  345 (377)
Q Consensus       284 i~~~---~~~~r-----~~l-----~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~-----~~~~~~~w~Ga  345 (377)
                      +.+.   -..+|     ..+     +..||||||+|+++|+.+-.++.|..+     .+++-.|     ..|.|++-.|-
T Consensus       524 ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y-----~VRiGrP~~~gv~gP~fAtAvGL  598 (610)
T 2d0o_A          524 AKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHY-----RLVAGRGNIRGSEGPRNAVATGL  598 (610)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTS-----SCEEEECCGGGTSTTSCHHHHHH
T ss_pred             HhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCCcHHHHHHH
Confidence            1111   00111     112     256999999999999999999888662     4555443     36788888886


Q ss_pred             HHh
Q 017102          346 SIL  348 (377)
Q Consensus       346 si~  348 (377)
                      .+|
T Consensus       599 lly  601 (610)
T 2d0o_A          599 ILS  601 (610)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6

Probab=98.86  E-value=3.5e-09  Score=101.24  Aligned_cols=180  Identities=12%  Similarity=0.122  Sum_probs=106.1

Q ss_pred             chhhhhhhhcCC-----ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHH
Q 017102          138 IQAVLSLYASGR-----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR  212 (377)
Q Consensus       138 ~~~~~a~~~~g~-----~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~  212 (377)
                      -+|.||.+++=.     ...++||+|+++|+++.+.+|..+  +...+++||++++..+..-|.        ..+...+|
T Consensus       392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~Lg--------~~d~~~AE  461 (607)
T 1nbw_A          392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTELG--------LEDLSLAE  461 (607)
T ss_dssp             CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHHT--------CSCHHHHH
T ss_pred             ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhC--------CCCHHHHH
Confidence            677777776532     467899999999999999999888  778899999999999998882        12367899


Q ss_pred             HHhHhcceeecCHHHHHHHhccCCCccceEEcCCCceEee--CCc-cccccc-cCCCCC-CCCCCCCC--hhH--HHHHH
Q 017102          213 DMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITI--GAE-RFRCPE-VLFQPS-MIGMESAG--IHE--TTYNS  283 (377)
Q Consensus       213 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~pd~~~i~i--~~~-~~~~~e-~lf~p~-~~~~~~~~--l~~--~I~~~  283 (377)
                      ++|. ++......           .   .....+...+++  ... ...++. .+..|+ +... .+.  +.+  ++.+.
T Consensus       462 rIK~-YG~A~~e~-----------l---f~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEElelVR~~  525 (607)
T 1nbw_A          462 AIKK-YPLAKVES-----------L---FSIRHENGAVEFFREALSPAVFAKVVYIKEGELVPI-DNASPLEKIRLVRRQ  525 (607)
T ss_dssp             HHHH-SCEEEECS-----------S---SEEEETTSCEEECSSCCCGGGTTCEEEEETTEEEEE-CCSSCHHHHHHHHHH
T ss_pred             Hhcc-cCceeecc-----------c---ccccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHHHHHHHHH
Confidence            9999 87654321           0   000001111221  000 000000 000000 0011 111  333  33333


Q ss_pred             HhcC---CHHHHH----------hhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECC-----CCCccccchhh
Q 017102          284 IMKC---DVDIRK----------DLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP-----PERKYSVWIGG  345 (377)
Q Consensus       284 i~~~---~~~~r~----------~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~-----~~~~~~~w~Ga  345 (377)
                      +.+.   -..+|.          ..+..||||||+|+++|+.+-.++.|..+     .+++-.|     ..|.|++-.|-
T Consensus       526 ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~-----~VRiGrP~~~g~~gP~fAtAvGL  600 (607)
T 1nbw_A          526 AKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY-----GVVAGQGNIRGTEGPRNAVATGL  600 (607)
T ss_dssp             HHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT-----TCEEEECCGGGTSCSCCHHHHHH
T ss_pred             HhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC-----CeEEecCCccccCCchHHHHHHH
Confidence            1111   011111          11256999999999999999999999773     3444433     36788888886


Q ss_pred             HHh
Q 017102          346 SIL  348 (377)
Q Consensus       346 si~  348 (377)
                      .+|
T Consensus       601 lly  603 (607)
T 1nbw_A          601 LLA  603 (607)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            554

>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A

Probab=98.58  E-value=4.7e-08  Score=88.12  Aligned_cols=51  Identities=25%  Similarity=0.448  Sum_probs=42.2

Q ss_pred             HHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          292 RKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       292 r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +....+.|+++||.|+.|+++++|++.+.        .++..|++|++..-.||+++|.
T Consensus       203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A~  253 (276)
T 4ehu_A          203 RIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYAF  253 (276)
T ss_dssp             HHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHHH
T ss_pred             hcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHHH
Confidence            44556789999999999999999988772        2466788899998999999984

>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5

Probab=97.60  E-value=0.00032  Score=62.66  Aligned_cols=48  Identities=17%  Similarity=0.383  Sum_probs=39.0

Q ss_pred             hcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          296 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       296 ~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+.|+++||.++.+++.+.+.+.|..        ++..++.++++.-.||+++|..
T Consensus       209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~  256 (270)
T 1hux_A          209 VKDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK  256 (270)
T ss_dssp             CSSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred             CCeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence            36799999999999999999988833        3555667778889999999854

>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*

Probab=96.73  E-value=0.0027  Score=57.88  Aligned_cols=73  Identities=15%  Similarity=0.105  Sum_probs=52.1

Q ss_pred             HHHHHHHhhhcccCCCCeEEeechhh---hhhh----hcC-CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHH
Q 017102          116 ANREKMTQIMFETFNAPAMYVAIQAV---LSLY----ASG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL  187 (377)
Q Consensus       116 ~~~~~l~~~lfe~~~~~~v~~~~~~~---~a~~----~~g-~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l  187 (377)
                      ..++.+++.+.+..|++ |.++...-   ++.+    +.+ ..+++|||+|+++|.++-+.++.+.  ...++|+|+-.+
T Consensus        97 ~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l  173 (315)
T 1t6c_A           97 KNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNL  173 (315)
T ss_dssp             TTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHH
T ss_pred             cCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHH
Confidence            45566677776677876 34444322   2221    123 5679999999999999999899886  667899999888


Q ss_pred             HHHH
Q 017102          188 TDAL  191 (377)
Q Consensus       188 ~~~l  191 (377)
                      ++.+
T Consensus       174 ~e~~  177 (315)
T 1t6c_A          174 TETF  177 (315)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8875

>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14

Probab=96.48  E-value=0.022  Score=50.85  Aligned_cols=50  Identities=18%  Similarity=0.004  Sum_probs=40.6

Q ss_pred             hhcCeEEecC-CCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102          295 LYGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       295 l~~nIvl~GG-~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      -+++|+++|| .+..|++.++|.+.+.-.     ..++.-++++++....||++++
T Consensus       236 ~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~  286 (287)
T 2ews_A          236 KTENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLE  286 (287)
T ss_dssp             TCCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTC
T ss_pred             CCCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhC
Confidence            3457999999 999999999999776442     3466668889999999999876

>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10

Probab=96.27  E-value=0.017  Score=51.80  Aligned_cols=51  Identities=12%  Similarity=0.096  Sum_probs=40.2

Q ss_pred             HHhhhcccCCCCeEEeechhhhhhhhc-----CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102          121 MTQIMFETFNAPAMYVAIQAVLSLYAS-----GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       121 l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~~~lVVDiG~~~t~v~pv~~g~~l~  174 (377)
                      +.+.+ +.+++| |.+.++.-+++++.     +..+.++|-+|.+ +-...|.+|++..
T Consensus        87 l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~  142 (292)
T 2gup_A           87 WYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHR  142 (292)
T ss_dssp             HHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEEC
T ss_pred             HHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEe
Confidence            55666 778888 78999999998873     5678999999986 6677788987764

>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}

Probab=95.87  E-value=0.0035  Score=57.78  Aligned_cols=75  Identities=17%  Similarity=0.174  Sum_probs=48.5

Q ss_pred             HHHHHHHhhhcccCCCCeEEeec---hhhhhhhhc--------CCceEEEEeCCCCceEEEEeeC--Ceec--CCceEEE
Q 017102          116 ANREKMTQIMFETFNAPAMYVAI---QAVLSLYAS--------GRTTGIVLDSGDGVSHTVPIYE--GYAL--PHAILRL  180 (377)
Q Consensus       116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~~~--------g~~~~lVVDiG~~~t~v~pv~~--g~~l--~~~~~~~  180 (377)
                      ..++.+++.+.+.+|++ |.+++   ++.++.++.        ....++|||||+++|.++.+.+  +.+.  .....++
T Consensus       102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl  180 (343)
T 3cer_A          102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM  180 (343)
T ss_dssp             TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred             cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence            33455666665666765 33333   333333322        2256999999999999998877  4331  1256789


Q ss_pred             cccHHHHHHHH
Q 017102          181 DLAGRDLTDAL  191 (377)
Q Consensus       181 ~~GG~~l~~~l  191 (377)
                      |+|+-.+++.+
T Consensus       181 plG~v~lt~~~  191 (343)
T 3cer_A          181 NIGSVRMTERH  191 (343)
T ss_dssp             SCCHHHHHHHT
T ss_pred             ehhHHHHHHHh
Confidence            99999988876

>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*

Probab=95.72  E-value=0.033  Score=51.19  Aligned_cols=56  Identities=9%  Similarity=0.070  Sum_probs=40.7

Q ss_pred             HHhhhcCeEEecC-CCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhh
Q 017102          292 RKDLYGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       292 r~~l~~nIvl~GG-~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      ++.-+++|+++|| .++.|++.+.|.+.|.---..  .+++.-++++++.-.+||++++
T Consensus       302 ~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~  358 (360)
T 2i7n_A          302 LNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL  358 (360)
T ss_dssp             HHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred             HHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence            3444468999999 999999999999988521111  2334445678999999998764

>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*

Probab=95.58  E-value=0.16  Score=46.14  Aligned_cols=46  Identities=17%  Similarity=0.161  Sum_probs=35.9

Q ss_pred             ccCCCCeEEeechhhhhhhh-------cCCceEEEEeCCCCceEEEEeeCCeecC
Q 017102          127 ETFNAPAMYVAIQAVLSLYA-------SGRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       127 e~~~~~~v~~~~~~~~a~~~-------~g~~~~lVVDiG~~~t~v~pv~~g~~l~  174 (377)
                      +.+++| |.+.++.-+++++       .+..+.++|-+|.+ +-...|.+|.++.
T Consensus        94 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~  146 (321)
T 3vgl_A           94 QRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR  146 (321)
T ss_dssp             HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred             hhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence            456787 8899999988875       24578899999977 7777788998774

>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}

Probab=95.47  E-value=0.11  Score=47.38  Aligned_cols=52  Identities=21%  Similarity=0.251  Sum_probs=36.6

Q ss_pred             CeEEecCCCCCCChHHHHHHHHhhhCCC-CceEEEECCCCCccccchhhHHhh
Q 017102          298 NIVLSGGSTMFPGIADRMSKEISALAPS-SMKIKVVAPPERKYSVWIGGSILA  349 (377)
Q Consensus       298 nIvl~GG~s~i~g~~~rl~~el~~~~~~-~~~v~v~~~~~~~~~~w~Gasi~a  349 (377)
                      .|+|.||.+..+-|.+++++.+.+.... ..++++..+.-...+.-.||+.++
T Consensus       272 ~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~  324 (327)
T 4db3_A          272 VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN  324 (327)
T ss_dssp             EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred             EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence            5889999888877888888888776532 224555555444567778988765

>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*

Probab=95.41  E-value=0.044  Score=53.35  Aligned_cols=73  Identities=12%  Similarity=0.094  Sum_probs=50.7

Q ss_pred             HHHHHHHhhhcccCCCCeEEeech---hhhhhhh----cC-CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHH
Q 017102          116 ANREKMTQIMFETFNAPAMYVAIQ---AVLSLYA----SG-RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL  187 (377)
Q Consensus       116 ~~~~~l~~~lfe~~~~~~v~~~~~---~~~a~~~----~g-~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l  187 (377)
                      ..+..+++.+-+..|++ |.+++.   +-+...+    .. ...++|||||+++|.++-..++.+.  ...++|+|.-.+
T Consensus        96 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl  172 (513)
T 1u6z_A           96 LNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSF  172 (513)
T ss_dssp             TTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHH
T ss_pred             cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHH
Confidence            44456677776778876 334442   2222222    12 2379999999999999999888887  667899999888


Q ss_pred             HHHH
Q 017102          188 TDAL  191 (377)
Q Consensus       188 ~~~l  191 (377)
                      ++.+
T Consensus       173 te~f  176 (513)
T 1u6z_A          173 AQLY  176 (513)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7765

>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}

Probab=95.29  E-value=0.053  Score=52.67  Aligned_cols=72  Identities=21%  Similarity=0.216  Sum_probs=49.8

Q ss_pred             HHHHHHHhhhcccCCCCeEEeec---hhhhhhh----hcCCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHH
Q 017102          116 ANREKMTQIMFETFNAPAMYVAI---QAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT  188 (377)
Q Consensus       116 ~~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~----~~g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~  188 (377)
                      ..+..+++.+.+.+|++ |.+++   ++-+..+    +.....++|||||+++|.++-+.+|.+.  ...++|+|.-.++
T Consensus       100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~  176 (508)
T 3hi0_A          100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLRLS  176 (508)
T ss_dssp             TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHHHH
T ss_pred             cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEehh
Confidence            34455666666667776 33443   3332222    2234578999999999999999999887  6678999997777


Q ss_pred             HH
Q 017102          189 DA  190 (377)
Q Consensus       189 ~~  190 (377)
                      +.
T Consensus       177 e~  178 (508)
T 3hi0_A          177 EQ  178 (508)
T ss_dssp             HH
T ss_pred             hc
Confidence            64

>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}

Probab=95.10  E-value=0.19  Score=45.61  Aligned_cols=46  Identities=17%  Similarity=0.161  Sum_probs=35.8

Q ss_pred             ccC-CCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102          127 ETF-NAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       127 e~~-~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~  174 (377)
                      +.+ ++| |++.++.-|++++.       +..+.++|-+|.+ +-...|.+|+++.
T Consensus       115 ~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~  168 (321)
T 3r8e_A          115 SEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFI  168 (321)
T ss_dssp             HHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred             HHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEec
Confidence            456 776 78999998887642       4578999999987 7777788998875

>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}

Probab=95.09  E-value=1.1  Score=39.99  Aligned_cols=52  Identities=12%  Similarity=0.210  Sum_probs=37.9

Q ss_pred             cCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       297 ~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      +.|+|.||.+..+.|.+++++.+......  .+++..+.-.+.+.-.||+.++.
T Consensus       239 ~~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~  290 (297)
T 4htl_A          239 THIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFL  290 (297)
T ss_dssp             SEEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHH
T ss_pred             CEEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHH
Confidence            35899999999899999999999866543  23444444445678889887664

>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}

Probab=94.93  E-value=0.19  Score=45.18  Aligned_cols=47  Identities=19%  Similarity=0.268  Sum_probs=34.6

Q ss_pred             ccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecCC
Q 017102          127 ETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALPH  175 (377)
Q Consensus       127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~~  175 (377)
                      +.+++| |.+.++.-+++++.       +..+.++|-+|.+ +-...|.+|++...
T Consensus        96 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G  149 (302)
T 3vov_A           96 EATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRG  149 (302)
T ss_dssp             HHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred             HhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeC
Confidence            456777 77899988887643       3578899999876 55666778887643

>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}

Probab=94.53  E-value=0.12  Score=46.77  Aligned_cols=46  Identities=15%  Similarity=0.182  Sum_probs=35.7

Q ss_pred             ccCCCCeEEeechhhhhhhhc-------CCceEEEEeCCCCceEEEEeeCCeecC
Q 017102          127 ETFNAPAMYVAIQAVLSLYAS-------GRTTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       127 e~~~~~~v~~~~~~~~a~~~~-------g~~~~lVVDiG~~~t~v~pv~~g~~l~  174 (377)
                      +.+++| |.+.++.-+++++.       +..+.++|-+|.+ +-...+.+|.+..
T Consensus       106 ~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~  158 (326)
T 2qm1_A          106 SALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH  158 (326)
T ss_dssp             HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred             HHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence            445777 78999999988752       4578999999987 6677788988765

>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A

Probab=93.47  E-value=0.042  Score=49.69  Aligned_cols=25  Identities=28%  Similarity=0.541  Sum_probs=23.6

Q ss_pred             ceEEEEeCCCCceEEEEeeCCeecC
Q 017102          150 TTGIVLDSGDGVSHTVPIYEGYALP  174 (377)
Q Consensus       150 ~~~lVVDiG~~~t~v~pv~~g~~l~  174 (377)
                      .++++||||+++|+|+|+.+|.++.
T Consensus       127 ~~~llvDIGsTTTDIipi~~G~pl~  151 (334)
T 3cet_A          127 ENCILVDMGSTTTDIIPIVEGKVVA  151 (334)
T ss_dssp             SSEEEEEECSSCEEEEEEETTEECC
T ss_pred             CCEEEEEcCcchhhhhhhcCCeecc
Confidence            6799999999999999999999985

>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}

Probab=93.43  E-value=0.54  Score=41.33  Aligned_cols=19  Identities=26%  Similarity=0.349  Sum_probs=16.7

Q ss_pred             cEEEeCCCCceEEeeeCCC
Q 017102            9 PLVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~   27 (377)
                      .++||+|.+++|+|+..++
T Consensus         4 lL~IDIGNT~iK~gl~d~~   22 (266)
T 3djc_A            4 ILCIDVGNSHIYGGVFDGD   22 (266)
T ss_dssp             EEEEEECSSEEEEEEEETT
T ss_pred             EEEEEECCCeEEEEEEECC
Confidence            6999999999999988653

>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}

Probab=91.65  E-value=0.87  Score=40.08  Aligned_cols=19  Identities=21%  Similarity=0.198  Sum_probs=16.1

Q ss_pred             cEEEeCCCCceEEeeeCCC
Q 017102            9 PLVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~   27 (377)
                      -++||+|.+++|+|+..++
T Consensus         2 lL~IDIGNT~ik~gl~~~~   20 (268)
T 2h3g_X            2 IFVLDVGNTNAVLGVFEEG   20 (268)
T ss_dssp             EEEEEECSSEEEEEEEETT
T ss_pred             EEEEEECcCcEEEEEEECC
Confidence            3789999999999988543

>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}

Probab=90.91  E-value=0.27  Score=44.46  Aligned_cols=72  Identities=17%  Similarity=0.197  Sum_probs=49.1

Q ss_pred             HHHHHHhhhcccCCCCeEEeec---hhhhhhh------hcCCceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHH
Q 017102          117 NREKMTQIMFETFNAPAMYVAI---QAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL  187 (377)
Q Consensus       117 ~~~~l~~~lfe~~~~~~v~~~~---~~~~a~~------~~g~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l  187 (377)
                      .+..+++.+-+.+|++ |.++.   ++.++.+      .....+++|+|||+++|.++-+.++.+.  ...++|+|.-.+
T Consensus        90 N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl  166 (315)
T 3mdq_A           90 NKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEIL--WKQSFEIGGQRL  166 (315)
T ss_dssp             THHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEE--EEEEESCCHHHH
T ss_pred             CHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEe--eeEEEechhhHH
Confidence            4455666665667776 33333   3322222      2223579999999999999999999887  677899998777


Q ss_pred             HHHH
Q 017102          188 TDAL  191 (377)
Q Consensus       188 ~~~l  191 (377)
                      ++.+
T Consensus       167 ~e~f  170 (315)
T 3mdq_A          167 IDRF  170 (315)
T ss_dssp             HHHS
T ss_pred             HHHh
Confidence            6654

>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A

Probab=90.39  E-value=1  Score=39.12  Aligned_cols=19  Identities=21%  Similarity=0.193  Sum_probs=16.4

Q ss_pred             cEEEeCCCCceEEeeeCCC
Q 017102            9 PLVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~   27 (377)
                      -++||+|.+++|+|+..++
T Consensus         5 ~L~IDIGNT~ik~gl~~~~   23 (249)
T 3bex_A            5 YLLVDVGNTHSVFSITEDG   23 (249)
T ss_dssp             EEEEEECSSEEEEEEESSS
T ss_pred             EEEEEECCCeEEEEEEECC
Confidence            5889999999999988644

>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5

Probab=86.55  E-value=4.2  Score=35.94  Aligned_cols=69  Identities=14%  Similarity=0.069  Sum_probs=46.4

Q ss_pred             cEEEEeCCCCCHHHHHHHHhhhcccCCC-CeEEeechhhhhhhh-cCCceEEEEeCCCCceEEEEeeCCeec
Q 017102          104 PILLTEAPLNPKANREKMTQIMFETFNA-PAMYVAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEGYAL  173 (377)
Q Consensus       104 ~vvl~~p~~~~~~~~~~l~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~~~lVVDiG~~~t~v~pv~~g~~l  173 (377)
                      .+-+..|-.. ......+.+.+-+.+++ ..|.+.++.-+++++ .+..+++++=+|.+..-...+.||+..
T Consensus        62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~  132 (291)
T 1zbs_A           62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA  132 (291)
T ss_dssp             EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred             EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence            4666677654 22223444455445665 368999999999997 567788888888776555556788775

>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*

Probab=86.25  E-value=2.5  Score=39.99  Aligned_cols=88  Identities=11%  Similarity=0.086  Sum_probs=46.0

Q ss_pred             HHHHHHHHhccccccc-CCCCCcEEEEeCCCCC------HHHHHHHHhhhcccC---CC--CeEEeechhh-------hh
Q 017102           83 DMEKIWHHTFYNELRV-APEEHPILLTEAPLNP------KANREKMTQIMFETF---NA--PAMYVAIQAV-------LS  143 (377)
Q Consensus        83 ~~~~~~~~~~~~~L~~-~~~~~~vvl~~p~~~~------~~~~~~l~~~lfe~~---~~--~~v~~~~~~~-------~a  143 (377)
                      .++.+++.+. +.... ..+..||.+.-..-+-      ...++.+++.+-+.+   +|  ..|.+++..-       ++
T Consensus        90 ~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~v  168 (452)
T 3zx3_A           90 YLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITI  168 (452)
T ss_dssp             HHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHH
Confidence            4555555543 22111 1245677766443221      113344444443333   33  4677766332       23


Q ss_pred             hhhcCC------ceEEEEeCCCCceEEEEeeCCe
Q 017102          144 LYASGR------TTGIVLDSGDGVSHTVPIYEGY  171 (377)
Q Consensus       144 ~~~~g~------~~~lVVDiG~~~t~v~pv~~g~  171 (377)
                      .|..|.      .+..++|+|+++|.|+=..++.
T Consensus       169 nyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~  202 (452)
T 3zx3_A          169 NYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS  202 (452)
T ss_dssp             HHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred             HhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence            334442      5677899999999999665553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	377
d2fxua2	225	c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxI	1e-117
d1k8ka2	258	c.55.1.1 (A:161-418) Actin-related protein 3, Arp3	1e-107
d1k8kb1	190	c.55.1.1 (B:154-343) Actin-related protein 2, Arp2	2e-80
d2fxua1	140	c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId:	3e-75
d1k8ka1	158	c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {	6e-72

>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 225

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  336 bits (863), Expect = e-117
 Identities = 192/225 (85%), Positives = 210/225 (93%)

Query: 149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAER 208
           RTTGIVLDSGDGV+H VPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGYSF TTAER
Sbjct: 1   RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAER 60

Query: 209 EIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSM 268
           EIVRD+KEKL Y+ALD+E E+ TA +SS++EKSYELPDGQVITIG ERFRCPE LFQPS 
Sbjct: 61  EIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSF 120

Query: 269 IGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMK 328
           IGMESAGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+PGIADRM KEI+ALAPS+MK
Sbjct: 121 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMK 180

Query: 329 IKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVH 373
           IK++APPERKYSVWIGGSILASLSTFQQMWI K EYDE+GPSIVH
Sbjct: 181 IKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH 225

>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 258

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  312 bits (801), Expect = e-107
 Identities = 84/251 (33%), Positives = 123/251 (49%), Gaps = 24/251 (9%)

Query: 151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREI 210
           TG V+DSGDGV+H +P+ EGY +   I  + +AGRD+T  + ++L +R          E 
Sbjct: 4   TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLET 63

Query: 211 VRDMKEKLAYIALDYEQELETAKT-SSAVEKSYEL-----PDGQVITIGAERFRCPEVLF 264
            + +KE+ +Y+  D  +E     T  S   K Y            I +G ERF  PE+ F
Sbjct: 64  AKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFF 123

Query: 265 QPSMIGMESA-GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI---- 319
            P     +    I E     I  C +D+R+ LY NIVLSGGSTMF     R+ +++    
Sbjct: 124 HPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTV 183

Query: 320 ------------SALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDES 367
                         L P  + ++V+    ++Y+VW GGS+LAS   F Q+   K +Y+E 
Sbjct: 184 DARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEI 243

Query: 368 GPSIV-HRKCF 377
           GPSI  H   F
Sbjct: 244 GPSICRHNPVF 254

>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]} Length = 190

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 2, Arp2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  242 bits (619), Expect = 2e-80
 Identities = 85/177 (48%), Positives = 123/177 (69%)

Query: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIV 211
           G+V+DSGDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY+F  +A+ E V
Sbjct: 1   GVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETV 60

Query: 212 RDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGM 271
           R +KEKL Y+  + EQE + A  ++ + +SY LPDG++I +G ERF  PE LFQP +I +
Sbjct: 61  RMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINV 120

Query: 272 ESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMK 328
           E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L    + 
Sbjct: 121 EGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVL 177

>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]} Length = 140

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  227 bits (580), Expect = 3e-75
 Identities = 131/139 (94%), Positives = 136/139 (97%)

Query: 10  LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
           LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTL
Sbjct: 2   LVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 61

Query: 70  KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETF 129
           KYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETF
Sbjct: 62  KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETF 121

Query: 130 NAPAMYVAIQAVLSLYASG 148
           N PAMYVAIQAVLSLYASG
Sbjct: 122 NVPAMYVAIQAVLSLYASG 140

>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]} Length = 158

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  219 bits (559), Expect = 6e-72
 Identities = 63/153 (41%), Positives = 84/153 (54%), Gaps = 9/153 (5%)

Query: 9   PLVCDNGTGMVKAGFAGDDAPRAVFPSIVG--------RPRHTGVMVGMGQKDAYVGDEA 60
             V D GTG  K G+AG+  P+ + PS +               VM G+   D ++GDEA
Sbjct: 5   ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEA 64

Query: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
             K      K+PI HGIV +WD ME+      +  LR  PE+H  LLTE PLN   NRE 
Sbjct: 65  IEKPTY-ATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREY 123

Query: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGI 153
             +IMFE+FN P +Y+A+QAVL+L AS  +  +
Sbjct: 124 TAEIMFESFNVPGLYIAVQAVLALAASWTSRQV 156

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	377
d2fxua2	225	Actin {Cow (Bos taurus) [TaxId: 9913]}	100.0
d1k8ka2	258	Actin-related protein 3, Arp3 {Cow (Bos taurus) [T	100.0
d1k8kb1	190	Actin-related protein 2, Arp2 {Cow (Bos taurus) [T	100.0
d1k8ka1	158	Actin-related protein 3, Arp3 {Cow (Bos taurus) [T	99.97
d2fxua1	140	Actin {Cow (Bos taurus) [TaxId: 9913]}	99.97
d1e4ft2	191	Cell division protein FtsA {Thermotoga maritima [T	99.44
d1jcea2	196	Prokaryotic actin homolog MreB {Thermotoga maritim	99.31
d1dkgd2	198	Heat shock protein 70kDa, ATPase fragment {Escheri	99.14
d1bupa2	193	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	99.01
d1jcea1	137	Prokaryotic actin homolog MreB {Thermotoga maritim	99.0
d2zgya2	163	Plasmid segregation protein ParM {Escherichia coli	98.65
d1bupa1	185	Heat shock protein 70kDa, ATPase fragment {Cow (Bo	98.58
d1dkgd1	183	Heat shock protein 70kDa, ATPase fragment {Escheri	98.52
d2fsja1	161	Hypothetical protein Ta0583 {Archaeon Thermoplasma	98.49
d2i7na2	212	Pantothenate kinase 1, PANK1 {Human (Homo sapiens)	95.29
d2fsja2	164	Hypothetical protein Ta0583 {Archaeon Thermoplasma	94.73
d1t6ca2	180	Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 6	93.39
d1u6za3	177	Exopolyphosphatase Ppx {Escherichia coli [TaxId: 5	93.38
d1huxa_	259	Hydroxyglutaryl-CoA dehydratase component A {Acida	92.66
d1nbwa3	202	ATPase domain of the glycerol dehydratase reactiva	92.17
d2zgya1	157	Plasmid segregation protein ParM {Escherichia coli	90.62
d1q18a1	110	Glucokinase Glk {Escherichia coli [TaxId: 562]}	87.47
d1zc6a1	114	Probable N-acetylglucosamine kinase CV2896 {Chromo	87.2
d2aa4a1	119	N-acetylmannosamine kinase NanK {Escherichia coli	81.41

>d2fxua2 c.55.1.1 (A:147-371) Actin {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.2e-53  Score=370.65  Aligned_cols=225  Identities=85%  Similarity=1.343  Sum_probs=216.5

Q ss_pred             CceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHH
Q 017102          149 RTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE  228 (377)
Q Consensus       149 ~~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~  228 (377)
                      ++||||||+|++.|+|+||+||+++.++..++++||++++++|.++|.+++.......+.+.++++|+.+|+++.+...+
T Consensus         1 rtTglVVDiG~~~t~v~PV~eG~~l~~~~~~~~~GG~~lt~~l~~~L~~~~~~~~~~~~~~~~~~~ke~~~~~~~d~~~e   80 (225)
T d2fxua2           1 RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENE   80 (225)
T ss_dssp             CSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHH
T ss_pred             CCEEEEEEcCCCcEEEEEEECCEEchhceEEEECcHHHHHHHHHHHHhhccCCcCCHHHHHHHHHHHHHHhhcccchhHH
Confidence            57999999999999999999999999999999999999999999999999998888888899999999999999999888


Q ss_pred             HHHhccCCCccceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCC
Q 017102          229 LETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF  308 (377)
Q Consensus       229 ~~~~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i  308 (377)
                      .......+.....|.+|||+.+.++.+|+.++|+||+|..++.+..+|+++|.++|.+||.|+|+.|++||+||||+|++
T Consensus        81 ~~~~~~~~~~~~~~~lpdg~~i~i~~er~~~~E~lF~p~~~~~~~~gl~~~i~~sI~~~~~d~r~~l~~nIvl~GG~s~~  160 (225)
T d2fxua2          81 MATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY  160 (225)
T ss_dssp             HHHHHHCSTTCEEEECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCS
T ss_pred             HhhcccCcccceeEECCCCCEEEEchHhccccHhhcCccccCCccCChhHHHHHHhhcCCcchhhhhhcCEEEeCCcccC
Confidence            88777777788899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhhcCCcccc
Q 017102          309 PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVH  373 (377)
Q Consensus       309 ~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e~G~~~~~  373 (377)
                      |||.+||++||..+.+...++++..+++|++++|+|||++|++++|+++||||+||+|+|++||+
T Consensus       161 ~G~~~RL~~El~~~~~~~~~~~v~~~~~~~~~aW~Ggsilasl~~f~~~~itk~eY~E~G~~ivh  225 (225)
T d2fxua2         161 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVH  225 (225)
T ss_dssp             TTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC
T ss_pred             CchhHHHHhHHHHhhccccceEEecCCCCCeeEEeCHhhhhcCccHhhEEEEHHHHHhhCccccC
Confidence            99999999999999998889999999999999999999999999999999999999999999986

>d1k8ka2 c.55.1.1 (A:161-418) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.9e-50  Score=359.62  Aligned_cols=228  Identities=36%  Similarity=0.666  Sum_probs=204.0

Q ss_pred             ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHH
Q 017102          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL  229 (377)
Q Consensus       150 ~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~  229 (377)
                      -||||||+|++.|+|+||+||+++.++.+++++||++++++|.++|.++++......+.+.++.+|+++||++.|+..+.
T Consensus         3 ~TGlVVDiG~~~T~v~PV~eG~~l~~~~~~~~~GG~~lt~~L~~~L~~~~~~~~~~~~~~~~~~~ke~~~~v~~d~~~e~   82 (258)
T d1k8ka2           3 LTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEF   82 (258)
T ss_dssp             CCEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHH
T ss_pred             CEEEEEEcCCCcEEEEEEECCEEchhheEEEeCcHHHHHHHHHHHHHHcCCCCCcHHHHHHHHhHHhhhcccccchHHHH
Confidence            48999999999999999999999999999999999999999999999999988877788899999999999999998887


Q ss_pred             HHhccC-CCccceEEcC-----CCceEeeCCccccccccCCCCCCCCCC-CCChhHHHHHHHhcCCHHHHHhhhcCeEEe
Q 017102          230 ETAKTS-SAVEKSYELP-----DGQVITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCDVDIRKDLYGNIVLS  302 (377)
Q Consensus       230 ~~~~~~-~~~~~~~~~p-----d~~~i~i~~~~~~~~e~lf~p~~~~~~-~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~  302 (377)
                      +..... ....+.|..+     ++..+.++.+|+.++|+||+|+..+.+ ..+|+++|.++|.+||+|.|+.|++||+||
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~er~~~~E~lF~p~~~~~~~~~~l~~~i~~si~~~~~d~r~~L~~nIvl~  162 (258)
T d1k8ka2          83 NKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLS  162 (258)
T ss_dssp             HHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEE
T ss_pred             HhhcccccccccccccccccCCCCeEEecCccceeccHHHhhhhhhcccccccchHHHHHHHHhccHHhhHHHHhCEEEe
Confidence            765432 2233455554     466888999999999999999988765 578999999999999999999999999999


Q ss_pred             cCCCCCCChHHHHHHHHhhhC----------------CCCceEEEECCCCCccccchhhHHhhcccccccccccHHHHhh
Q 017102          303 GGSTMFPGIADRMSKEISALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDE  366 (377)
Q Consensus       303 GG~s~i~g~~~rl~~el~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~~y~e  366 (377)
                      ||+|++|||.+||++||.+.+                |...++++..+++|.+++|+||||+|++++|+++||||+||+|
T Consensus       163 GG~s~~~Gf~eRL~~EL~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~~~~r~~s~W~Ggsila~l~~f~~~~Itk~eY~E  242 (258)
T d1k8ka2         163 GGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEE  242 (258)
T ss_dssp             SGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHHHH
T ss_pred             cCcccCCCHHHHHHHHHHhhcchhhhhhhhccccccCCCCceeeEecCCCCCceehHHHHHHHcCccHHhheecHHHHhh
Confidence            999999999999999997653                3344678888999999999999999999999999999999999


Q ss_pred             cCCccc-ccccC
Q 017102          367 SGPSIV-HRKCF  377 (377)
Q Consensus       367 ~G~~~~-~~k~~  377 (377)
                      +|++|| +||||
T Consensus       243 ~G~~iv~~rk~f  254 (258)
T d1k8ka2         243 IGPSICRHNPVF  254 (258)
T ss_dssp             HCGGGGGCCCCC
T ss_pred             hChHHHhcCCCc
Confidence            999999 68898

>d1k8kb1 c.55.1.1 (B:154-343) Actin-related protein 2, Arp2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 2, Arp2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.6e-37  Score=262.59  Aligned_cols=174  Identities=49%  Similarity=0.901  Sum_probs=165.5

Q ss_pred             EEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHHH
Q 017102          152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELET  231 (377)
Q Consensus       152 ~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~  231 (377)
                      |||||+|++.|+|+||+||+++.++..++++||+++++++.++|.+++.......+...++++|++.|+++.++.++...
T Consensus         1 GlVVDiG~~~T~v~PV~dG~~l~~a~~~~~igG~~lt~~l~~~l~~~~~~~~~~~~~~~~~~i~~~~~~v~~~~~~e~~~   80 (190)
T d1k8kb1           1 GVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKL   80 (190)
T ss_dssp             CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHH
T ss_pred             CEEEEcCCCcEEEEEeECCEEcccceEEEeccHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHhhhhhhcccHHHHHHh
Confidence            68999999999999999999999999999999999999999999999888877777889999999999999999988887


Q ss_pred             hccCCCccceEEcCCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHHhhhcCeEEecCCCCCCCh
Q 017102          232 AKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI  311 (377)
Q Consensus       232 ~~~~~~~~~~~~~pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~  311 (377)
                      ..........|.+|||+.+.++.+|+.++|.||+|+..+.+..+|+++|.++|.+||.|.|+.|++||+||||+|++|||
T Consensus        81 ~~~~~~~~~~~~lpdg~~i~i~~er~~~~E~lF~p~~~~~~~~~l~~~i~~si~~c~~d~r~~L~~NIvl~GG~Sl~pGf  160 (190)
T d1k8kb1          81 ALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGL  160 (190)
T ss_dssp             HHHCSTTCEEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTH
T ss_pred             hhcccceeeeeecCCCcEEEEChhhccccccccChhhcCcccccHHHHHHHHHHhCCHhHHHHHHcCEEEECcccCCCCH
Confidence            77777778899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhCCC
Q 017102          312 ADRMSKEISALAPS  325 (377)
Q Consensus       312 ~~rl~~el~~~~~~  325 (377)
                      .+||++||+++.|.
T Consensus       161 ~~RL~~EL~~l~p~  174 (190)
T d1k8kb1         161 PSRLERELKQLYLE  174 (190)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhH
Confidence            99999999998764

>d1k8ka1 c.55.1.1 (A:3-160) Actin-related protein 3, Arp3 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin-related protein 3, Arp3
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=1.8e-31  Score=219.72  Aligned_cols=145  Identities=43%  Similarity=0.744  Sum_probs=128.0

Q ss_pred             CCcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc--------cccCCCccceeccchhcccCcceeeccccCCcc
Q 017102            7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV   78 (377)
Q Consensus         7 ~~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~--------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i   78 (377)
                      .++||||+||+++|+||+|++.|++++||+++.+.....        ..+....+.++|+++.++. ...+.+|+++|.+
T Consensus         3 ~PavViD~GS~~~KaG~age~~P~~i~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~ig~e~~~~~-~~~~~~pi~~G~i   81 (158)
T d1k8ka1           3 LPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP-TYATKWPIRHGIV   81 (158)
T ss_dssp             SCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-TSEEECCEETTEE
T ss_pred             CCcEEEECCCCeEEEEECCCCCCCEEeccceeecccccccCchhcccccCCCccceecChhhhhCC-CccccccccCCeE
Confidence            468999999999999999999999999999987654322        2233445778999987654 4678999999999


Q ss_pred             CCHHHHHHHHHHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCceE
Q 017102           79 SNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG  152 (377)
Q Consensus        79 ~~~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~~~  152 (377)
                      .|||.++.+|+++|.+.|.++++++||++++|+++++..|++++|++||+|++|++++.+++++|+||+|++++
T Consensus        82 ~dwd~~e~l~~~~~~~~l~v~~~~~pvlltEp~~~~~~~Re~~~EilFE~~~vpa~~~~~~~~Lslya~g~~~~  155 (158)
T d1k8ka1          82 EDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQ  155 (158)
T ss_dssp             SCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTT
T ss_pred             ecHHHHHHHHHHHHHHhcccCCCCCceeeeecCCCCHHHHHHHHHHHhhhcCCCEEEEEchhhhhheeCCCCCC
Confidence            99999999999999899999999999999999999999999999999999999999999999999999998764

>d2fxua1 c.55.1.1 (A:7-146) Actin {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Actin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=4.9e-31  Score=213.19  Aligned_cols=140  Identities=94%  Similarity=1.485  Sum_probs=127.3

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhcccCcceeeccccCCccCCHHHHHHHH
Q 017102            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIW   88 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~~~~~~~~~   88 (377)
                      .||||+||++||+||+|++.|++++|+++++++......+....+.++|+++........+++|+++|.+.||+.++++|
T Consensus         1 avViD~Gs~~~k~G~age~~P~~~~ps~~g~~~~~~~~~~~~~~~~~igd~~~~~~~~~~~~~p~~~g~v~dwd~~e~~~   80 (140)
T d2fxua1           1 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIW   80 (140)
T ss_dssp             CEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHHHHHHHH
T ss_pred             CEEEECCCCeEEEeeCCCCCcceEeccceeeecccccccCccccceeeChhHhhccccccccCcCcCCcccCHHHHHHHH
Confidence            58999999999999999999999999999999887776666677889999988877778899999999999999999999


Q ss_pred             HHhcccccccCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcC
Q 017102           89 HHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG  148 (377)
Q Consensus        89 ~~~~~~~L~~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g  148 (377)
                      +++|.+.|.++++++|+++++|++++...|++++|++||.|++|++++.+++++++|++|
T Consensus        81 ~~~~~~~l~~~~~~~pvlltE~~~~~~~~r~~~~EilFE~~~vp~~~~~~~~~ls~ys~G  140 (140)
T d2fxua1          81 HHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASG  140 (140)
T ss_dssp             HHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTT
T ss_pred             HHhhhhhcccCCCCCcceeeccCCCCHHHHHHHHHHhhccCCCCEEEEEhhHHhHhhcCC
Confidence            999988999999999999999999999999999999999999999999999999999987

>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Cell division protein FtsA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.44  E-value=1.5e-13  Score=115.41  Aligned_cols=141  Identities=14%  Similarity=0.164  Sum_probs=86.7

Q ss_pred             eEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHHH
Q 017102          151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELE  230 (377)
Q Consensus       151 ~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~  230 (377)
                      ..+|||+|+++|+++.+.+|.++  ....+++||+++++.+.+.+.         ...+.+|++|.+++.+..+..    
T Consensus         8 Gv~vvDiG~~tt~i~i~~~G~l~--~~~~i~~GG~~iT~~Ia~~l~---------i~~~~AE~iK~~~g~~~~~~~----   72 (191)
T d1e4ft2           8 GVVVVNLGYNFTGLIAYKNGVPI--KISYVPVGMKHVIKDVSAVLD---------TSFEESERLIITHGNAVYNDL----   72 (191)
T ss_dssp             CEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHHHHHHT---------CCHHHHHHHHHHHCCSCCTTC----
T ss_pred             CEEEEEeCCCcEEEEEEECCeEE--EEEEEeeChHHHHHHHHHHhc---------ccHHHHHHHHhhccccccccc----
Confidence            46899999999999999999998  678899999999999998772         235679999999887643311    


Q ss_pred             HhccCCCccceEEcCCCc-eEeeCCcc-ccccccCCCCCCCCCCCCChhHHHHHHHhcC----CHHHHHhhhcCeEEecC
Q 017102          231 TAKTSSAVEKSYELPDGQ-VITIGAER-FRCPEVLFQPSMIGMESAGIHETTYNSIMKC----DVDIRKDLYGNIVLSGG  304 (377)
Q Consensus       231 ~~~~~~~~~~~~~~pd~~-~i~i~~~~-~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~----~~~~r~~l~~nIvl~GG  304 (377)
                           ......+.-.++. ...+.... ..+.+..+..         +.+.+.+.+..+    ..+....+..+|+||||
T Consensus        73 -----~~~~i~~~~~~~~~~~~~~~~~l~~ii~~~~~e---------i~~~i~~~~~~~~~~~~~~~~~~~~~~IvLtGG  138 (191)
T d1e4ft2          73 -----KEEEIQYRGLDGNTIKTTTAKKLSVIIHARLRE---------IMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGG  138 (191)
T ss_dssp             -----CCCEEEEECTTSSCEEEEEHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHC------CGGGCEEEESG
T ss_pred             -----cchhcccccccCCCcccccHHHHHHHHHHHHHH---------HHHHHHHHHHhhccchhhhcccccCceEEEecc
Confidence                 1111112112221 11111100 0011111111         233333334332    22333456678999999


Q ss_pred             CCCCCChHHHHHHHHh
Q 017102          305 STMFPGIADRMSKEIS  320 (377)
Q Consensus       305 ~s~i~g~~~rl~~el~  320 (377)
                      +|++|||.+.+++.|.
T Consensus       139 gs~l~gl~~~l~~~l~  154 (191)
T d1e4ft2         139 GAKIPRINELATEVFK  154 (191)
T ss_dssp             GGGSTTHHHHHHHHHC
T ss_pred             hhhhhhHHHHHHHHHC
Confidence            9999999999999885

>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

Probab=99.31  E-value=2.1e-12  Score=108.48  Aligned_cols=174  Identities=16%  Similarity=0.249  Sum_probs=105.8

Q ss_pred             ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhcceeecCHHHHH
Q 017102          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL  229 (377)
Q Consensus       150 ~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~  229 (377)
                      .+.+|+|+|+++|+|+.+..|.+.  ....++.||.+++..+...+.........   .......+............. 
T Consensus         7 ~gvlV~DiGGGT~Dvsi~~~g~~~--~~~~~~~gg~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-   80 (196)
T d1jcea2           7 SGNMVVDIGGGTTEVAVISLGSIV--TWESIRIAGDEMDEAIVQYVRETYRVAIG---ERTAERVKIEIGNVFPSKEND-   80 (196)
T ss_dssp             SCEEEEEECSSCEEEEEEETTEEE--EEEEESCSHHHHHHHHHHHHHHHHCEECC---HHHHHHHHHHHCBCSCCHHHH-
T ss_pred             CceEEEEcCCCcEEEEEEEcCCEe--EEeeecCCCcccccchhhhhhhhhccccc---chhHHHHHHHHhhhhhhhhcc-
Confidence            467999999999999999999887  55678999999999988877543211111   112222222222221111111 


Q ss_pred             HHhccCCCccceEEcCCCceEeeCC---ccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHHH-hhhcCeEEecCC
Q 017102          230 ETAKTSSAVEKSYELPDGQVITIGA---ERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRK-DLYGNIVLSGGS  305 (377)
Q Consensus       230 ~~~~~~~~~~~~~~~pd~~~i~i~~---~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r~-~l~~nIvl~GG~  305 (377)
                       ...   .........++.......   +.....+.++..         +.+.|.+++..+...... ...+.|+||||+
T Consensus        81 -~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~i~~~l~~~~~~~~~~~~~~~IvLvGGs  147 (196)
T d1jcea2          81 -ELE---TTVSGIDLSTGLPRKLTLKGGEVREALRSVVVA---------IVESVRTTLEKTPPELVSDIIERGIFLTGGG  147 (196)
T ss_dssp             -HCE---EEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHH---------HHHHHHHHHHTSCHHHHHHHHHHCEEEESGG
T ss_pred             -ccc---eeeeeeeccCCCccccccchhhHHHHHHHHHHH---------HHHHHHHHHHHhhccccccccccceEEeCch
Confidence             000   011112222332222111   112233334333         667778888877766544 345679999999


Q ss_pred             CCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhc
Q 017102          306 TMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS  350 (377)
Q Consensus       306 s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~  350 (377)
                      |++|++++++++.+..      ++  ....+|..+++.||+++++
T Consensus       148 S~ip~v~~~l~~~fg~------~v--~~~~~P~~aVA~GAai~~~  184 (196)
T d1jcea2         148 SLLRGLDTLLQKETGI------SV--IRSEEPLTAVAKGAGMVLD  184 (196)
T ss_dssp             GCSBTHHHHHHHHHSS------CE--EECSSTTTHHHHHHHHGGG
T ss_pred             hcchhHHHHHHHHHCc------CC--ccCCChHHHHHHHHHHHHH
Confidence            9999999999988832      33  3356889999999998864

>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=99.14  E-value=1.3e-11  Score=103.86  Aligned_cols=169  Identities=19%  Similarity=0.239  Sum_probs=98.7

Q ss_pred             CCceEEEEeCCCCceEEEEeeC------Cee-cCCceEEEcccHHHHHHHHHHHHHh-----cCCCccChhH-----HHH
Q 017102          148 GRTTGIVLDSGDGVSHTVPIYE------GYA-LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTAE-----REI  210 (377)
Q Consensus       148 g~~~~lVVDiG~~~t~v~pv~~------g~~-l~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~~~-----~~~  210 (377)
                      |..+-+|+|+|+++++++.+.=      +.. +........+||+++++.+.+++.+     .+.+......     ...
T Consensus         1 g~~~vlV~D~GggT~Dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~   80 (198)
T d1dkgd2           1 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEA   80 (198)
T ss_dssp             CEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHH
T ss_pred             CCeEEEEEEcCCCcEEEEEEEEEccCCCcEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHH
Confidence            3457799999999999987741      211 1112234578999999999988743     2333322111     123


Q ss_pred             HHHHhHhcceeecCHHHHHHHhccCCCccceEEcC----C---CceE--eeCCcccc-ccccCCCCCCCCCCCCChhHHH
Q 017102          211 VRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP----D---GQVI--TIGAERFR-CPEVLFQPSMIGMESAGIHETT  280 (377)
Q Consensus       211 ~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~~p----d---~~~i--~i~~~~~~-~~e~lf~p~~~~~~~~~l~~~I  280 (377)
                      +++.|+.++.                .....+.+|    |   +..+  .+..+.+. ..+.++..         +.++|
T Consensus        81 ~e~~K~~Ls~----------------~~~~~i~~~~~~~~~~~~~~~~~~itr~~~~~~~~~~~~~---------~~~~i  135 (198)
T d1dkgd2          81 AEKAKIELSS----------------AQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNR---------SIELL  135 (198)
T ss_dssp             HHHHHHHTTS----------------SSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHH---------HHHHH
T ss_pred             HHHHHHHhcC----------------CCeEEEEEeeeecCCCCCceEEEEEcHHHHHHHHHHHHHH---------HHHHH
Confidence            4444444331                111122221    1   1222  23333222 22222222         56666


Q ss_pred             HHHHhcCCHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          281 YNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       281 ~~~i~~~~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      .+++.+...+  ..-++.|+|+||+|++|.++++|++.+..        ++....+|..++-.||+++|..
T Consensus       136 ~~~l~~a~~~--~~~Id~v~lvGG~sr~p~l~~~i~~~f~~--------~~~~~~~p~~aVa~GAa~~aa~  196 (198)
T d1dkgd2         136 KVALQDAGLS--VSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRKDVNPDEAVAIGAAVQGGV  196 (198)
T ss_dssp             HHHHHTTTCC--TTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCBCSSCTTTHHHHHHHHHTTT
T ss_pred             HHHHHHhCCC--hhHCcEEEEEcCccCCHHHHHHHHHHHCC--------CCCCCCChHHHHHHHHHHHHHh
Confidence            7777665433  22357799999999999999999988742        1233457789999999999874

>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.01  E-value=7.4e-11  Score=98.77  Aligned_cols=172  Identities=18%  Similarity=0.245  Sum_probs=92.7

Q ss_pred             CceEEEEeCCCCceEEEEee--CCee-cCCceEEEcccHHHHHHHHHHHHHhc-----CCCccChhH-----HHHHHHHh
Q 017102          149 RTTGIVLDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMK  215 (377)
Q Consensus       149 ~~~~lVVDiG~~~t~v~pv~--~g~~-l~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik  215 (377)
                      ..+-+|+|+|+++++++.+-  ++.. +..+.....+||.++++.+.+++.++     +.+......     ...++..|
T Consensus         4 e~~VlV~D~GggT~Dvsv~~~~~~~~~v~~~~g~~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~e~~K   83 (193)
T d1bupa2           4 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAK   83 (193)
T ss_dssp             CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEEeCCCeEEEEEEEEeCCEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHh
Confidence            35689999999999988642  2321 11222345799999999998877431     222211111     12233333


Q ss_pred             HhcceeecCHHHHHHHhccCCCccceEEc---CCCceEeeCCccccccccCCCCCCCCCCCCChhHHHHHHHhcCCHHHH
Q 017102          216 EKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIR  292 (377)
Q Consensus       216 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~---pd~~~i~i~~~~~~~~e~lf~p~~~~~~~~~l~~~I~~~i~~~~~~~r  292 (377)
                      +.++.                .....+.+   .++....+.-.|..+ |-++.|-     ...+.+.|.+++.+...  .
T Consensus        84 ~~ls~----------------~~~~~~~~~~~~~~~~~~~~itr~~~-e~~~~~~-----~~~~~~~i~~~l~~~~~--~  139 (193)
T d1bupa2          84 RTLSS----------------STQASIEIDSLYEGIDFYTSITRARF-EELNADL-----FRGTLDPVEKALRDAKL--D  139 (193)
T ss_dssp             HHHTT----------------SSEEEEEEEEEETTEEEEEEEEHHHH-HHHTHHH-----HHHTHHHHHHHHHHHTC--C
T ss_pred             hccCC----------------CceEEEEEecccCCCccceEEcHHHH-HHHHHHH-----HHHHHHHHHHHHHHcCC--C
Confidence            33321                11112222   223333222222222 2233330     01133444444443221  1


Q ss_pred             HhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          293 KDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       293 ~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      ..-++.|++|||+|++|.+++.+++.+...       .+..+.+|+.++-.||+++|..
T Consensus       140 ~~~i~~V~lvGG~sr~p~v~~~i~~~f~~~-------~i~~~~~p~~aVa~GaA~~aa~  191 (193)
T d1bupa2         140 KSQIHDIVLVGGSTRIPKIQKLLQDFFNGK-------ELNKSINPDEAVAYGAAVQAAI  191 (193)
T ss_dssp             GGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBCSSCGGGHHHHHHHHHHHH
T ss_pred             HHHCCEEEEECCccccHHHHHHHHHHcCCC-------CCCCCCChHHHHHHHHHHHHHh
Confidence            223567999999999998888777665321       2334568899999999999864

>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Prokaryotic actin homolog MreB
species: Thermotoga maritima [TaxId: 2336]

Probab=99.00  E-value=6.9e-10  Score=87.33  Aligned_cols=131  Identities=11%  Similarity=0.086  Sum_probs=93.6

Q ss_pred             CcEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCccccCCCccceeccchhccc----CcceeeccccCCccCCHHH
Q 017102            8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD   83 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~vg~~~~~~~----~~~~~~~p~~~g~i~~~~~   83 (377)
                      +.|.||+||+++.+.+.++.. ....|+..+....       ......+|+++....    ......+++..+...+.+.
T Consensus         1 ~~iGIDlGTtns~va~~~~~~-v~~~~~~~~~~~~-------~~~~~~~g~~a~~~~~~~~~~~~~~k~~~~~~~~~~~~   72 (137)
T d1jcea1           1 KDIGIDLGTANTLVFLRGKGI-VVNEPSVIAIDST-------TGEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV   72 (137)
T ss_dssp             CEEEEEECSSEEEEEETTTEE-EEEEESCEEEETT-------TCCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred             CeEEEEcChhhEEEEEeCCCE-EeecCCcceEecC-------CCeEEEEehHHhhhhhhccccceeEEeccCCccCcHHH
Confidence            468999999999998765431 1223444443322       123344566555442    2245677888999999888


Q ss_pred             HHHHHHHhcccccc-cCCCCCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhc
Q 017102           84 MEKIWHHTFYNELR-VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS  147 (377)
Q Consensus        84 ~~~~~~~~~~~~L~-~~~~~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~  147 (377)
                      .+.++.++...... ....-..+++++|..+...+|+.+.+.+ +..|++.+.++++|+||++++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~VItVPa~f~~~qR~at~~Aa-~~AGl~vv~li~EPtAAAiGa  136 (137)
T d1jcea1          73 ALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAG-LEAGASKVFLIEEPMAAAIGS  136 (137)
T ss_dssp             HHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHHH-HHTTCSEEEEEEHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhcCccccceEEEeecccCHHHHHHHHHHH-HHcCCCEEEEeCCHHHHHhCC
Confidence            88888777533222 2234577999999999999999988877 889999999999999999876

>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Plasmid segregation protein ParM
species: Escherichia coli [TaxId: 562]

Probab=98.65  E-value=2e-08  Score=80.96  Aligned_cols=49  Identities=12%  Similarity=0.030  Sum_probs=39.0

Q ss_pred             ceEEEEeCCCCceEEEEeeCCeecCC-ceEEEcccHHHHHHHHHHHHHhc
Q 017102          150 TTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTER  198 (377)
Q Consensus       150 ~~~lVVDiG~~~t~v~pv~~g~~l~~-~~~~~~~GG~~l~~~l~~~l~~~  198 (377)
                      .+.+|||+|+++|+++.+.++..... +....+.||.++++.+.+.+...
T Consensus         7 ~~ilViDiGggTtDi~v~~~~~~~~~~~~~~~~~G~~~i~~~i~~~l~~~   56 (163)
T d2zgya2           7 DSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLA   56 (163)
T ss_dssp             CEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCcEEEEEEcCCeEEEEEeeccccccchHHHHHHHHhhHHh
Confidence            57899999999999998876655433 34567999999999999888543

>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase fragment {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.58  E-value=3.7e-08  Score=81.26  Aligned_cols=47  Identities=9%  Similarity=0.017  Sum_probs=43.0

Q ss_pred             CCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCC
Q 017102          102 EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGR  149 (377)
Q Consensus       102 ~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~  149 (377)
                      -..+|+++|..++..+|+.+.+.+ +..|++.+.++++|.||++++|.
T Consensus       136 ~~~~VitvPa~f~~~qr~~~~~Aa-~~AGl~~~~li~EP~AAAl~Ygl  182 (185)
T d1bupa1         136 VTNAVVTVPAYFNDSQRQATKDAG-TIAGLNVLRIINEPTAAAIAYGL  182 (185)
T ss_dssp             CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTT
T ss_pred             cCcEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHhcc
Confidence            356999999999999999988887 88999999999999999999985

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Heat shock protein 70kDa, ATPase fragment
species: Escherichia coli, gene dnaK [TaxId: 562]

Probab=98.52  E-value=1.3e-08  Score=83.96  Aligned_cols=48  Identities=10%  Similarity=0.018  Sum_probs=43.4

Q ss_pred             CCcEEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhcCCc
Q 017102          102 EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRT  150 (377)
Q Consensus       102 ~~~vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~  150 (377)
                      -..+||++|..++..+|+.+.+.+ +..|++.+.++++|.||++++|..
T Consensus       133 ~~~~VitVPa~f~~~~r~~l~~Aa-~~AG~~~~~li~EP~AAAl~Ygl~  180 (183)
T d1dkgd1         133 VTEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAYGLD  180 (183)
T ss_dssp             CCEEEECBCTTCCHHHHHHHHHHH-HHTTCEESCCCBHHHHHHHHHTCC
T ss_pred             CCeEEEEECCCCCHHHHHHHHHHH-HHcCCCEEEEecCHHHHHHHhccc
Confidence            357999999999999999988888 789999999999999999998853

>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ta0583-like
domain: Hypothetical protein Ta0583
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.49  E-value=9.6e-08  Score=76.77  Aligned_cols=49  Identities=18%  Similarity=0.257  Sum_probs=39.5

Q ss_pred             ceEEEEeCCCCceEEEEeeCC--eecCCceEEEcccHHHHHHHHHHHHHhc
Q 017102          150 TTGIVLDSGDGVSHTVPIYEG--YALPHAILRLDLAGRDLTDALMKILTER  198 (377)
Q Consensus       150 ~~~lVVDiG~~~t~v~pv~~g--~~l~~~~~~~~~GG~~l~~~l~~~l~~~  198 (377)
                      .+.+|||+|+++|+++.+.++  .+........+.|+.++.+.+.+.+..+
T Consensus         6 g~~lviDIG~gTtDi~v~~~~~~~~~~~~~~~~~~g~~~i~~~i~~~i~~~   56 (161)
T d2fsja1           6 GYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE   56 (161)
T ss_dssp             SEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEcCcCeEEEEEEECCCeEEEEEEeccHhHHHHHHHHHHHHHHHHH
Confidence            468999999999999988765  4555455678999999999998887643

>d2i7na2 c.55.1.14 (A:382-593) Pantothenate kinase 1, PANK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Fumble-like
domain: Pantothenate kinase 1, PANK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.29  E-value=0.021  Score=46.65  Aligned_cols=72  Identities=11%  Similarity=0.041  Sum_probs=48.1

Q ss_pred             ChhHHHHHHHhcC-CHHHHHhhhcCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHH
Q 017102          275 GIHETTYNSIMKC-DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSI  347 (377)
Q Consensus       275 ~l~~~I~~~i~~~-~~~~r~~l~~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi  347 (377)
                      ++.++|.+.|... -...+..=+++|+++||.+.-..+++++.+.....+.. ..+++.-+.+..++.-.||.|
T Consensus       136 S~q~~v~~~l~~~a~~aa~~~~~k~iv~~Ggv~aN~~lr~~l~~~~~~~~~~-~~i~~~Fp~~~~y~galGA~l  208 (212)
T d2i7na2         136 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSK-GQLKALFLEHEGYFGAVGALL  208 (212)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTT-TSCCEEEETTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHhhCHHHHHHHHHHHHHHHhh-CCceEEecCChhhhHHHHHHH
Confidence            4555666555433 23344555689999999999999999998776554322 144555566667888888654

>d2fsja2 c.55.1.12 (A:1-164) Hypothetical protein Ta0583 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ta0583-like
domain: Hypothetical protein Ta0583
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.73  E-value=0.014  Score=45.62  Aligned_cols=131  Identities=15%  Similarity=0.084  Sum_probs=68.8

Q ss_pred             cEEEeCCCCceEEeeeCCCCCCCCCCceEEeeCCCCc---------cccCCCccceeccchhcccCcceeeccccCCccC
Q 017102            9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVS   79 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~~P~~~~ps~~~~~~~~~~---------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~   79 (377)
                      .+.||+|-.++|+- .++. -...+||.++.....+.         ....++..+++|+.|....    ..+++......
T Consensus         3 iigiD~G~g~tK~~-~~~~-~~~~fPS~v~~~~~~~~~~~~~~~~~~~~~~~~~y~vG~~A~~~~----~~~~~~~dk~~   76 (164)
T d2fsja2           3 VVGLDVGYGDTKVI-GVDG-KRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNN----IRVPQGDGRLA   76 (164)
T ss_dssp             EEEEEECSSEEEEE-CGGG-CEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSC----CBCCSSTTCTT
T ss_pred             EEEEEcCCcceEEE-ecCC-CEEEEeeeceeccccccccCCCceeEEEEeCCeEEEEccchhhcc----ccccccccccc
Confidence            78899999999974 3332 23568998876543322         1122455677887663321    12344444443


Q ss_pred             CHHHHHHHHHHhcccccccC-CCCCc--EEEEeCCCCCHHHHHHHHhhhcc-------------cCCCCeEEeechhhhh
Q 017102           80 NWDDMEKIWHHTFYNELRVA-PEEHP--ILLTEAPLNPKANREKMTQIMFE-------------TFNAPAMYVAIQAVLS  143 (377)
Q Consensus        80 ~~~~~~~~~~~~~~~~L~~~-~~~~~--vvl~~p~~~~~~~~~~l~~~lfe-------------~~~~~~v~~~~~~~~a  143 (377)
                      +.+. ..++..++....... ..+..  +++-.|...-..+++++.+.+..             .+.+..|.+.|++..|
T Consensus        77 ~~~~-~~l~l~al~~~~~~~~~~~~~v~lv~GLP~~~~~~~ke~~~~~l~~~~~~~~~~~g~~~~i~I~~v~V~pQg~ga  155 (164)
T d2fsja2          77 SKEA-FPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGA  155 (164)
T ss_dssp             STTT-HHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHH
T ss_pred             CHHH-HHHHHHHHHHHhhhcCCCceeEEEEecCCHHHHHHHHHHHHHHhcCCCceEEeeCCeEEEEEEeEEEEecCCHHH
Confidence            3221 222222221111111 12223  44446765555677777777642             2345677778888877


Q ss_pred             hhh
Q 017102          144 LYA  146 (377)
Q Consensus       144 ~~~  146 (377)
                      .+.
T Consensus       156 ~~~  158 (164)
T d2fsja2         156 ALY  158 (164)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            663

>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.39  E-value=0.051  Score=42.98  Aligned_cols=40  Identities=20%  Similarity=0.174  Sum_probs=34.6

Q ss_pred             ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHH
Q 017102          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL  191 (377)
Q Consensus       150 ~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l  191 (377)
                      .+++|+|+|+++|.++-+-++.+.  ...++++|.-.+++.+
T Consensus         3 ~~~lviDIGGGStEli~~~~~~i~--~~~Sl~lG~vrl~e~f   42 (180)
T d1t6ca2           3 GEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNLTETF   42 (180)
T ss_dssp             SEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHHHHHH
T ss_pred             CCEEEEEeCCChHhhEEeeCCcee--eEEEeecceEEeeccc
Confidence            478999999999999999999888  6789999987776654

>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Ppx/GppA phosphatase
domain: Exopolyphosphatase Ppx
species: Escherichia coli [TaxId: 562]

Probab=93.38  E-value=0.059  Score=42.31  Aligned_cols=40  Identities=13%  Similarity=0.091  Sum_probs=33.6

Q ss_pred             ceEEEEeCCCCceEEEEeeCCeecCCceEEEcccHHHHHHHH
Q 017102          150 TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL  191 (377)
Q Consensus       150 ~~~lVVDiG~~~t~v~pv~~g~~l~~~~~~~~~GG~~l~~~l  191 (377)
                      ...||+|+|+++|.++.+.++.+.  ...++|+|.-.+++.+
T Consensus         2 gr~Lv~DIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl~e~~   41 (177)
T d1u6za3           2 GRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSFAQLY   41 (177)
T ss_dssp             SCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHHHHHH
T ss_pred             CCEEEEEeCCChhheEEEECCcEe--EEEEeccceEEeeccc
Confidence            458999999999999999999887  6678999986665554

>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Hydroxyglutaryl-CoA dehydratase component A
species: Acidaminococcus fermentans [TaxId: 905]

Probab=92.66  E-value=0.023  Score=47.36  Aligned_cols=47  Identities=17%  Similarity=0.410  Sum_probs=37.8

Q ss_pred             cCeEEecCCCCCCChHHHHHHHHhhhCCCCceEEEECCCCCccccchhhHHhhcc
Q 017102          297 GNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL  351 (377)
Q Consensus       297 ~nIvl~GG~s~i~g~~~rl~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l  351 (377)
                      +.|+++||.++.++|.+++++.|        +.++..|+.+..+.-.||+++|.-
T Consensus       209 ~~Iv~gGGv~~~~~~~~~l~~~l--------~~~i~~~~~~~~agaiGAA~lA~~  255 (259)
T d1huxa_         209 KDVVMTGGVAQNYGVRGALEEGL--------GVEIKTSPLAQYNGALGAALYAYK  255 (259)
T ss_dssp             SSEEEESGGGGCHHHHHHHHHHH--------CSCEECCGGGGGHHHHHHHHHHHH
T ss_pred             CcEEEEccccccHHHHHHHHHHH--------CCCEEcCCCccHHHHHHHHHHHHH
Confidence            46999999999999999998887        234666777778888999998853

>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ATPase domain of dehydratase reactivase alpha subunit
domain: ATPase domain of the glycerol dehydratase reactivase alpha subunit
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.17  E-value=0.4  Score=36.71  Aligned_cols=55  Identities=22%  Similarity=0.303  Sum_probs=39.1

Q ss_pred             EEEeCCCCceEEEEee-CCeecCCceEEEcccHHHHHHHHHHHHHhcCCCccChhHHHHHHHHhHhc
Q 017102          153 IVLDSGDGVSHTVPIY-EGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKL  218 (377)
Q Consensus       153 lVVDiG~~~t~v~pv~-~g~~l~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~  218 (377)
                      .|+|+|+++|+.+-|- +|.+.   .....=.|+.++..+..-|   |.     .+..++|++|+.-
T Consensus         7 aIlDlG~GStDasii~~~g~v~---avhlAGAG~mVTmlI~~eL---Gl-----~d~~lAE~IKkyP   62 (202)
T d1nbwa3           7 AILDLGAGSTDAAIVNAEGQIT---AVHLAGAGNMVSLLIKTEL---GL-----EDLSLAEAIKKYP   62 (202)
T ss_dssp             EEEEECSSEEEEEEECSSSCEE---EEEEECCHHHHHHHHHHHH---TC-----SCHHHHHHHHHSC
T ss_pred             EEEEcCCCccchhhccCCCcEE---EEEecCCchhhHHHHHHHh---CC-----CcHHHHHHHhhcc
Confidence            5789999999988664 35433   2344557899999988777   22     2467899998753

>d2zgya1 c.55.1.1 (A:1-157) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Actin/HSP70
domain: Plasmid segregation protein ParM
species: Escherichia coli [TaxId: 562]

Probab=90.62  E-value=0.1  Score=40.14  Aligned_cols=130  Identities=14%  Similarity=0.101  Sum_probs=61.3

Q ss_pred             cEEEeCCCCceEEeeeCCC--CCCCCCCceEEeeCCCCc------cccCCCccceeccchhcccCcceeeccccCCccCC
Q 017102            9 PLVCDNGTGMVKAGFAGDD--APRAVFPSIVGRPRHTGV------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN   80 (377)
Q Consensus         9 ~vvID~Gs~~~k~G~~~~~--~P~~~~ps~~~~~~~~~~------~~~~~~~~~~vg~~~~~~~~~~~~~~p~~~g~i~~   80 (377)
                      .|.||.|..++|+.+...+  .+..+.|+..........      ..-.++..+.+|..+..........+       ..
T Consensus         2 ~I~iD~Gy~nvK~a~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~y~v~G~~Y~vG~~~~~~~~t~~~dy-------~~   74 (157)
T d2zgya1           2 LVFIDDGSTNIKLQWQESDGTIKQHISPNSFKREWAVSFGDKKVFNYTLNGEQYSFDPISPDAVVTTNIAW-------QY   74 (157)
T ss_dssp             EEEEEECSSEEEEEEECSSSCEEEEEEECCEESSCCCCSSSCCCCEEEETTEEEEECTTCBSCCCSCCSGG-------GG
T ss_pred             EEEEecCCCcEEEEEecCCCcEeEEEeccccccccccccCCCceEEEEECCEEEEEcCCcccccccccccc-------cc
Confidence            5889999999998765422  222344443322111100      00112334445544322110000000       01


Q ss_pred             HHHHHHHHHHhcccccccCCCCCcEEEEeCCC--C------CHHHHHHHHhhhcc--------cCCCCeEEeechhhhhh
Q 017102           81 WDDMEKIWHHTFYNELRVAPEEHPILLTEAPL--N------PKANREKMTQIMFE--------TFNAPAMYVAIQAVLSL  144 (377)
Q Consensus        81 ~~~~~~~~~~~~~~~L~~~~~~~~vvl~~p~~--~------~~~~~~~l~~~lfe--------~~~~~~v~~~~~~~~a~  144 (377)
                      .+....++.+.+ ...+.++.+-.+++..|..  .      .+...+...+-++.        .+.+..|.+.|++++|.
T Consensus        75 ~~~~~ali~~aL-~~~~~~~~~v~~~~glp~~~f~~~~~~~~~~~i~~k~~~~~~~~~~~~~~~~~I~~V~V~Pq~~~A~  153 (157)
T d2zgya1          75 SDVNVVAVHHAL-LTSGLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAG  153 (157)
T ss_dssp             SHHHHHHHHHHH-HHHSCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHH
T ss_pred             cHHHHHHHHHHH-HHcCCCCCcEEEEecCCHHHHhhhhhHHHHHHHHhhhcccceeeecCCeEEEEEEEEEEEeCcHHhh
Confidence            223444555555 3344445544566667742  1      12222333333432        35568999999999998


Q ss_pred             hh
Q 017102          145 YA  146 (377)
Q Consensus       145 ~~  146 (377)
                      |.
T Consensus       154 ~~  155 (157)
T d2zgya1         154 YE  155 (157)
T ss_dssp             HH
T ss_pred             hc
Confidence            75

>d1q18a1 c.55.1.7 (A:2-111) Glucokinase Glk {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: Glucokinase
domain: Glucokinase Glk
species: Escherichia coli [TaxId: 562]

Probab=87.47  E-value=0.15  Score=36.34  Aligned_cols=25  Identities=8%  Similarity=-0.080  Sum_probs=20.5

Q ss_pred             hhhcccCCCCeEEeechhhhhhhhc
Q 017102          123 QIMFETFNAPAMYVAIQAVLSLYAS  147 (377)
Q Consensus       123 ~~lfe~~~~~~v~~~~~~~~a~~~~  147 (377)
                      +.+.+.++.+.|.+.++.-|++|+.
T Consensus        83 ~~l~~~~~~~~v~v~NDa~AaA~gi  107 (110)
T d1q18a1          83 AEMKKNLGFSHLEIINDFTAVSMAI  107 (110)
T ss_dssp             HHHHHHTTCSEEEEEEHHHHHHHHG
T ss_pred             HHHHHHhCCCcEEEEehHHHHhccc
Confidence            3344678899999999999999875

>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase CV2896 {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: BadF/BadG/BcrA/BcrD-like
domain: Probable N-acetylglucosamine kinase CV2896
species: Chromobacterium violaceum [TaxId: 536]

Probab=87.20  E-value=1  Score=31.83  Aligned_cols=63  Identities=10%  Similarity=0.134  Sum_probs=39.2

Q ss_pred             HHHHHHHHHHhcccccccCCCCCc---EEEEeCCCCCHHHHHHHHhhhcccCCCCeEEeechhhhhhhhc
Q 017102           81 WDDMEKIWHHTFYNELRVAPEEHP---ILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAS  147 (377)
Q Consensus        81 ~~~~~~~~~~~~~~~L~~~~~~~~---vvl~~p~~~~~~~~~~l~~~lfe~~~~~~v~~~~~~~~a~~~~  147 (377)
                      |+.+.+.++.++ +.-+....+..   +.+..+.......++.+.+.+   ..+..|.+.++.-+|+++.
T Consensus        46 ~~~i~~~i~~~~-~~ag~~~~~~~~~~~~~g~aG~~~~~~~~~l~~~~---~~~~~v~v~nDa~~A~~ga  111 (114)
T d1zc6a1          46 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGEFESQA---PGFARLSLATDGYTTLLGA  111 (114)
T ss_dssp             HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHHHHHTC---CCCSEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHcCCChhhhceeEEEEEecCCCcHHHHHHHHHhC---CCCCeEEEECHHHHHHHHh
Confidence            445555555555 33444444432   445567666677767666544   3446899999999998863

>d2aa4a1 c.55.1.10 (A:1-119) N-acetylmannosamine kinase NanK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: ROK
domain: N-acetylmannosamine kinase NanK
species: Escherichia coli [TaxId: 562]

Probab=81.41  E-value=1.2  Score=31.71  Aligned_cols=20  Identities=30%  Similarity=0.410  Sum_probs=17.2

Q ss_pred             CcEEEeCCCCceEEeeeCCC
Q 017102            8 QPLVCDNGTGMVKAGFAGDD   27 (377)
Q Consensus         8 ~~vvID~Gs~~~k~G~~~~~   27 (377)
                      +.+.||+|.++++++....+
T Consensus         2 ~~lgiDiGgT~i~~~l~d~~   21 (119)
T d2aa4a1           2 TTLAIDIGGTKLAAALIGAD   21 (119)
T ss_dssp             CEEEEEECSSEEEEEEECTT
T ss_pred             eEEEEEeCcCEEEEEEEcCC
Confidence            47999999999999988654