Citrus Sinensis ID: 017120
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 377 | ||||||
| 224072162 | 462 | predicted protein [Populus trichocarpa] | 0.952 | 0.777 | 0.756 | 1e-169 | |
| 224058361 | 429 | predicted protein [Populus trichocarpa] | 0.938 | 0.825 | 0.768 | 1e-167 | |
| 255537733 | 462 | conserved hypothetical protein [Ricinus | 0.973 | 0.794 | 0.737 | 1e-166 | |
| 297745405 | 420 | unnamed protein product [Vitis vinifera] | 0.954 | 0.857 | 0.704 | 1e-160 | |
| 359489711 | 450 | PREDICTED: uncharacterized protein LOC10 | 0.954 | 0.8 | 0.704 | 1e-160 | |
| 356513299 | 454 | PREDICTED: uncharacterized protein LOC10 | 0.954 | 0.792 | 0.702 | 1e-158 | |
| 225426012 | 427 | PREDICTED: uncharacterized protein LOC10 | 0.970 | 0.857 | 0.713 | 1e-157 | |
| 356527674 | 452 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.827 | 0.685 | 1e-157 | |
| 147777966 | 420 | hypothetical protein VITISV_028215 [Viti | 0.965 | 0.866 | 0.713 | 1e-156 | |
| 224127878 | 442 | predicted protein [Populus trichocarpa] | 0.992 | 0.846 | 0.674 | 1e-155 |
| >gi|224072162|ref|XP_002303634.1| predicted protein [Populus trichocarpa] gi|222841066|gb|EEE78613.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust.
Identities = 276/365 (75%), Positives = 308/365 (84%), Gaps = 6/365 (1%)
Query: 13 EDQNEMPQKEPEIGAEKCDLFTGDWVPNLKGPVYTNASCPLIESHQNCMGNGRPDSGYLY 72
E +E PQK KCDLFTGDW+PN GP+YTN+SC LIE HQNCM NGR DSGYL+
Sbjct: 104 EPDDETPQKG------KCDLFTGDWIPNPSGPMYTNSSCSLIEGHQNCMRNGRTDSGYLF 157
Query: 73 WRWRPENCELPPFNAENFLYLMRNKTWALIGDSISRNHVQSLLCMLSTVEQAVEVYHDEE 132
WRW P +C+LPPFNA+ FL +MRNK WALIGDSISRNHVQSLLC+LSTVEQAVEVYHDEE
Sbjct: 158 WRWNPRDCQLPPFNAQRFLEVMRNKRWALIGDSISRNHVQSLLCILSTVEQAVEVYHDEE 217
Query: 133 YRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDKLDKKWTEQYLNLDY 192
Y+SKRWHFPSYNF++S IWSPFL KAAIFED +GVSTSEVQL LDKLD WT Y LDY
Sbjct: 218 YKSKRWHFPSYNFTISNIWSPFLVKAAIFEDNDGVSTSEVQLQLDKLDTNWTNLYQGLDY 277
Query: 193 MIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTELGFDFAYRKTLSSVMDFIAASKHKGL 252
MIISTGKWFLK++IY+ENDTVVGCH CP +N TE GF FAY K L M+FIA SKHKGL
Sbjct: 278 MIISTGKWFLKAAIYHENDTVVGCHICPGKNFTEKGFVFAYEKALRYAMNFIATSKHKGL 337
Query: 253 VFFRTSTPDHFENGEWHNGGSCQKMMPVKEGDIELKDLNRILRNIELEEFEKAVPRASQN 312
+FFRTSTPDHFENGEWHNGG+C K P KEG+IELKDLN+ILR +EL EFEKA +A++N
Sbjct: 338 IFFRTSTPDHFENGEWHNGGNCTKTTPAKEGEIELKDLNKILRTVELAEFEKASAKAAEN 397
Query: 313 GVKLKLLDFTNLLLLRPDGHPGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDTWNDLIME 372
GV LKLLDFTNLLL RPDGHPG YR+F PFA+DK+AKVQNDCLHWCLPGPID WND+IME
Sbjct: 398 GVNLKLLDFTNLLLSRPDGHPGPYRQFHPFAQDKNAKVQNDCLHWCLPGPIDYWNDVIME 457
Query: 373 TVVNG 377
+NG
Sbjct: 458 MAING 462
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224058361|ref|XP_002299487.1| predicted protein [Populus trichocarpa] gi|222846745|gb|EEE84292.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255537733|ref|XP_002509933.1| conserved hypothetical protein [Ricinus communis] gi|223549832|gb|EEF51320.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297745405|emb|CBI40485.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|359489711|ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356513299|ref|XP_003525351.1| PREDICTED: uncharacterized protein LOC100816814 [Glycine max] | Back alignment and taxonomy information |
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| >gi|225426012|ref|XP_002273303.1| PREDICTED: uncharacterized protein LOC100265666 [Vitis vinifera] gi|297742310|emb|CBI34459.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356527674|ref|XP_003532433.1| PREDICTED: uncharacterized protein LOC100778581 [Glycine max] | Back alignment and taxonomy information |
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| >gi|147777966|emb|CAN70903.1| hypothetical protein VITISV_028215 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224127878|ref|XP_002320186.1| predicted protein [Populus trichocarpa] gi|222860959|gb|EEE98501.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 377 | ||||||
| TAIR|locus:2136113 | 432 | TBL23 "AT4G11090" [Arabidopsis | 0.968 | 0.844 | 0.615 | 1.2e-131 | |
| TAIR|locus:2128489 | 430 | TBL24 "AT4G23790" [Arabidopsis | 0.968 | 0.848 | 0.604 | 6.6e-129 | |
| TAIR|locus:2035342 | 456 | TBL25 "AT1G01430" [Arabidopsis | 0.917 | 0.758 | 0.576 | 5.6e-116 | |
| TAIR|locus:2125048 | 442 | TBL26 "AT4G01080" [Arabidopsis | 0.933 | 0.796 | 0.546 | 1.3e-114 | |
| TAIR|locus:2146062 | 526 | TBL21 "AT5G15890" [Arabidopsis | 0.885 | 0.634 | 0.435 | 8.5e-81 | |
| TAIR|locus:2020628 | 416 | TBL27 "TRICHOME BIREFRINGENCE- | 0.944 | 0.855 | 0.401 | 3.9e-76 | |
| TAIR|locus:2146077 | 426 | TBL19 "AT5G15900" [Arabidopsis | 0.896 | 0.793 | 0.399 | 3.9e-76 | |
| TAIR|locus:2091388 | 414 | TBL22 "AT3G28150" [Arabidopsis | 0.933 | 0.850 | 0.381 | 6.7e-72 | |
| TAIR|locus:2153077 | 501 | YLS7 "AT5G51640" [Arabidopsis | 0.904 | 0.680 | 0.375 | 6.7e-65 | |
| TAIR|locus:2138043 | 533 | TBL18 "AT4G25360" [Arabidopsis | 0.952 | 0.673 | 0.355 | 3.3e-63 |
| TAIR|locus:2136113 TBL23 "AT4G11090" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1291 (459.5 bits), Expect = 1.2e-131, P = 1.2e-131
Identities = 229/372 (61%), Positives = 289/372 (77%)
Query: 8 VVSEAEDQNEMPQKEPEIGAEKCDLFTGDWVPNLKGPVYTNASCPLI-ESHQNCMGNGRP 66
++S+ EDQ +P +I EKCDLFTG W+ + GP+YTN SC ++ ++HQNC+ NGRP
Sbjct: 62 ILSDNEDQ--IPV---DIEVEKCDLFTGKWIKDPLGPIYTNESCGIVVDAHQNCITNGRP 116
Query: 67 DSGYLYWRWRPENCELPPFNAENFLYLMRNKTWALIGDSISRNHVQSLLCMLSTVEQAVE 126
DSG+L W+W+P +C LP F++ FL LMRNK+WA+IGDSI+RNHV+SLLCMLSTVE+ VE
Sbjct: 117 DSGFLNWKWKPNDCSLPRFDSLRFLQLMRNKSWAIIGDSIARNHVESLLCMLSTVEKPVE 176
Query: 127 VYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDKLDKKWTEQ 186
VYHDE YRSKRWHFPSYNF+VS IWSPFL +A IFED NGVS++ VQLHLDKLD WT+
Sbjct: 177 VYHDENYRSKRWHFPSYNFTVSNIWSPFLVQADIFEDSNGVSSAAVQLHLDKLDNTWTDL 236
Query: 187 YLNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKR-NLTELGFDFAYRKTLSSVMDFIA 245
+ +LDY IIS+G+WFLK+++Y+EN VGCH CP+ N+T+LGFD+AY +L VMDFIA
Sbjct: 237 FPSLDYAIISSGEWFLKTAVYHENANPVGCHGCPESSNMTDLGFDYAYNTSLRHVMDFIA 296
Query: 246 ASKHKGLVFFRTSTPDHFENGEWHNGGSCQKMMPVKEGDIELKDLNRILRNIELEEFEKA 305
SK KG++FFRTS PDHFE+GEWHNGG+C+K PV E +E+K LN+ILR++E+ +FE+
Sbjct: 297 KSKTKGMIFFRTSIPDHFEDGEWHNGGTCKKTEPVGEEAVEMKVLNKILRDVEINQFERV 356
Query: 306 VPRASQNGVKXXXXXXXXXXXXRPDGHPGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDT 365
V Q RPDGHPG YREF+PF KDK+A VQNDCLHWCLPGPID
Sbjct: 357 VTEMGQESENLKLLDFAGMLLTRPDGHPGPYREFRPFDKDKNATVQNDCLHWCLPGPIDH 416
Query: 366 WNDLIMETVVNG 377
ND+I+E +VNG
Sbjct: 417 LNDVILEIIVNG 428
|
|
| TAIR|locus:2128489 TBL24 "AT4G23790" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035342 TBL25 "AT1G01430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125048 TBL26 "AT4G01080" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2146062 TBL21 "AT5G15890" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020628 TBL27 "TRICHOME BIREFRINGENCE-LIKE 27" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2146077 TBL19 "AT5G15900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2091388 TBL22 "AT3G28150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2153077 YLS7 "AT5G51640" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2138043 TBL18 "AT4G25360" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 377 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 6e-97 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 2e-40 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-25 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 289 bits (741), Expect = 6e-97
Identities = 108/294 (36%), Positives = 153/294 (52%), Gaps = 27/294 (9%)
Query: 82 LPPFNAENFLYLMRNKTWALIGDSISRNHVQSLLCMLSTVEQAVEVYHDEEYRSKRWHFP 141
LP F+A+ FL +R K +GDS+SRN +SL+C+LS VE + + R R+ F
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKTLERDGRLFRFRFK 60
Query: 142 SYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDKLDKKWTEQYLNLDYMIISTGKWF 201
YN ++ WSPFL ++ + + L LD +D+KW++ + D ++ ++G W+
Sbjct: 61 DYNVTIEFYWSPFLVES------DNAEEGKRVLKLDSIDEKWSKLWPGADVLVFNSGHWW 114
Query: 202 LKSSIYYENDTVVGCHYCPKRNLTELGFDFAYRKTLSSVMDFIAA--SKHKGLVFFRTST 259
L +Y G YC K N E+GF AYRK L + ++ K VFFRT +
Sbjct: 115 LHRKVYI------GWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRVFFRTFS 168
Query: 260 PDHFENGEWHNGGSCQKMMPVKEGDIELKDLNRILRNIELEEFEKAVPRASQNGVKLKLL 319
P HFE GEW+ GGSC + P+ E K L + +I E +A +KLL
Sbjct: 169 PVHFEGGEWNTGGSCYETEPLLG--SEYKGLTPEMIDIVNEVLSRA-----AMKTPVKLL 221
Query: 320 DFTNLLLLRPDGHPGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDTWNDLIMET 373
D T L R DGHP YR+ P K+ DCLHWCLPG DTWN+L++
Sbjct: 222 DITLLSQYRKDGHPSVYRKPGPPKKE------QDCLHWCLPGVPDTWNELLLAL 269
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 377 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.06 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-112 Score=833.25 Aligned_cols=329 Identities=30% Similarity=0.590 Sum_probs=285.1
Q ss_pred CCCCCCCCCccCceeeCCCCCCcCCCCCC-CcccccCccCCCCCCCCCceeeecCCCCCCCCCCHHHHHHHHcCCeeEEe
Q 017120 24 EIGAEKCDLFTGDWVPNLKGPVYTNASCP-LIESHQNCMGNGRPDSGYLYWRWRPENCELPPFNAENFLYLMRNKTWALI 102 (377)
Q Consensus 24 ~~~~~~Cd~~~G~WV~d~~~p~Y~~~~Cp-~i~~~~~C~~nGRpD~~yl~WrWqP~~C~L~~fd~~~fl~~lrgk~i~fV 102 (377)
.++.+.||+|+|+||+|+++|+|++.+|| ||++++||++|||||++|++|||||++|+||||||.+||++|||||||||
T Consensus 47 ~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 47 QANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 36688899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ehhhhHHHHHHHHHhhcccccceeeeeccccceeeEEeccCceEEEEEeccccccccccccCCCCccceEEEEecccchh
Q 017120 103 GDSISRNHVQSLLCMLSTVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAKAAIFEDYNGVSTSEVQLHLDKLDKK 182 (377)
Q Consensus 103 GDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~wspfLv~~~~~~~~~~~~~~~~~l~lD~~~~~ 182 (377)
||||+|||||||+|||+++++...+....+.+.++|+|++||+||+||||||||+.+.. . +...|+||+++.
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~---~----~~~~l~LD~id~- 198 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAV---Q----GKRVLKLEEISG- 198 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecC---C----CceeEEecCcch-
Confidence 99999999999999999977655444455567889999999999999999999997632 1 234699999875
Q ss_pred HHhhcCCccEEEEecceecccccccccCCeEeccccC--CCCcccccchHHHHHHHHHHHHHHHH--hcCCCcEEEEeeC
Q 017120 183 WTEQYLNLDYMIISTGKWFLKSSIYYENDTVVGCHYC--PKRNLTELGFDFAYRKTLSSVMDFIA--ASKHKGLVFFRTS 258 (377)
Q Consensus 183 ~~~~~~~~DvlV~ntG~Ww~~~~~~~~~g~~~g~~~~--~~~~~~~~~~~~Ayr~al~t~~~~v~--~~~~~~~vffRt~ 258 (377)
+++.|+++|||||||||||.+++ .+.||.++ ...++++|++..||++||+||++||+ +++.+|+|||||+
T Consensus 199 ~a~~w~~~DvlVfntghWw~~~~------~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~ 272 (387)
T PLN02629 199 NANAWRDADVLIFNTGHWWSHQG------SLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSI 272 (387)
T ss_pred hhhhhccCCEEEEeCccccCCCC------eeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEec
Confidence 58899999999999999999864 34566554 34467899999999999999999997 6788999999999
Q ss_pred CCCCCCCCCCCCCC-----CC-CcccccCCCCcccchhhHHHhhhhHHHHHHHhhhhccCCceeEEEecccccccCCCCC
Q 017120 259 TPDHFENGEWHNGG-----SC-QKMMPVKEGDIELKDLNRILRNIELEEFEKAVPRASQNGVKLKLLDFTNLLLLRPDGH 332 (377)
Q Consensus 259 sP~Hf~~g~W~~gg-----~C-~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLDIt~ls~~R~DaH 332 (377)
||+||+||+||+|| +| ++|+|+.+.++ .+....+|+ +++++.+.++.+|++||||+||++|||||
T Consensus 273 SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~~~~~~~~~--------~ve~v~~~~~~~v~lLDIT~ls~lR~DgH 343 (387)
T PLN02629 273 SPTHYNPSEWSAGASTTTKNCYGETTPMSGMTY-PGAYPDQMR--------VVDEVIRGMHNPAYLLDITLLSELRKDGH 343 (387)
T ss_pred CcccccCCCcCCCCCCCCCCCccCCccCcCccc-cCcchHHHH--------HHHHHHHhcCCceEEEechhhhhcCCCCC
Confidence 99999999999865 68 79999985543 344444443 23344445678999999999999999999
Q ss_pred CCCcccCCCcccCCCCCCCCCcccccCCChhhHHHHHHHHHHh
Q 017120 333 PGAYREFQPFAKDKDAKVQNDCLHWCLPGPIDTWNDLIMETVV 375 (377)
Q Consensus 333 ps~y~~~~~~~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~ 375 (377)
||+|++..+.++++++..++||+||||||||||||||||++|+
T Consensus 344 Ps~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 344 PSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 9999866556666777888999999999999999999999996
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 377 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 5e-05
Identities = 70/438 (15%), Positives = 128/438 (29%), Gaps = 139/438 (31%)
Query: 3 ELVFSVVSEAEDQNEMPQKEPEIGAEKCDLFTGDWVPNLKGPVYTNASCPLIESHQNCMG 62
++ S++S+ E + + K+ G + LF W K E Q +
Sbjct: 40 DMPKSILSKEEIDHIIMSKDAVSGTLR--LF---WTLLSKQE----------EMVQKFVE 84
Query: 63 NG-RPDSGYLYWRWRPENCELPPFNAENFLYLMRNKTW----ALIGDSISR--------N 109
R + +L + E P ++ R++ + ++SR
Sbjct: 85 EVLRINYKFLMSPIKTE-QRQPSMMTRMYIE-QRDRLYNDNQVFAKYNVSRLQPYLKLRQ 142
Query: 110 HVQSL-------LC-ML----STVEQAVEVYHDEEYRSKRWHFPSYNFSVSVIWSPFLAK 157
+ L + +L + V A++V + + K + W
Sbjct: 143 ALLELRPAKNVLIDGVLGSGKTWV--ALDVCLSYKVQCK--------MDFKIFWLNL--- 189
Query: 158 AAIFEDYNGVSTSEVQLHLDKL----DKKWT---EQYLNLDYMIISTGKW---FLKSSIY 207
N S V L KL D WT + N+ I S LKS Y
Sbjct: 190 ------KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 208 YEN----DTVVGCHYCPKRNLTEL-GFDFAYRKTL-----SSVMDFIAAS--KHKGLVFF 255
V +N F+ + K L V DF++A+ H L
Sbjct: 244 ENCLLVLLNV--------QNAKAWNAFNLSC-KILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 256 RTS-TPDHFEN--GEWHNGGSCQ-------KMMPVKEGDI--ELKD-LNRI--LRNIELE 300
+ TPD ++ ++ + Q P + I ++D L +++ +
Sbjct: 295 SMTLTPDEVKSLLLKYLD-CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 301 EFEKAVPRASQNGVKLKLLDFTNLLLLRPDGHPGAYREFQPFAKDKDAKVQNDCLHWCLP 360
+ + L +L+ P + + F A +
Sbjct: 354 KLTTII------ESSLNVLE--------PAEYRKMFDRLSVF--PPSAHI---------- 387
Query: 361 GPIDT----WNDLIMETV 374
P W D+I V
Sbjct: 388 -PTILLSLIWFDVIKSDV 404
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 377 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 93.08 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=93.08 E-value=0.37 Score=41.56 Aligned_cols=52 Identities=15% Similarity=0.272 Sum_probs=36.2
Q ss_pred CCccEEEEecceecccccccccCCeEeccccCCCCcccccchHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCC
Q 017120 188 LNLDYMIISTGKWFLKSSIYYENDTVVGCHYCPKRNLTELGFDFAYRKTLSSVMDFIAASKHKGLVFFRTSTPDHF 263 (377)
Q Consensus 188 ~~~DvlV~ntG~Ww~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~Ayr~al~t~~~~v~~~~~~~~vffRt~sP~Hf 263 (377)
..+|+|||+.|..=. .. ..+.|+..|+++++.+....++++++|-+..|...
T Consensus 73 ~~pd~Vvi~~G~ND~--------------------~~----~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 73 TKFDVIHFNNGLHGF--------------------DY----TEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRT 124 (200)
T ss_dssp SCCSEEEECCCSSCT--------------------TS----CHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCEE
T ss_pred CCCCeEEEEeeeCCC--------------------CC----CHHHHHHHHHHHHHHHhhhCCCccEEEeccCCCcc
Confidence 578999999885310 00 13467777888777776456778999999888653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 377 | |||
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 82.88 |
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein BT2961 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=82.88 E-value=0.19 Score=40.88 Aligned_cols=14 Identities=43% Similarity=0.615 Sum_probs=12.6
Q ss_pred cCCeeEEeehhhhH
Q 017120 95 RNKTWALIGDSISR 108 (377)
Q Consensus 95 rgk~i~fVGDSl~R 108 (377)
.||+|+|+|||++-
T Consensus 7 ~~kkI~~~GDS~T~ 20 (248)
T d3bzwa1 7 QGKKVGYIGDSITD 20 (248)
T ss_dssp TTCEEEEEESTTTC
T ss_pred CCCEEEEEehHHcc
Confidence 58999999999984
|