Citrus Sinensis ID: 017130


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
MSCSYLTTWVSSKSNLSSHLLHLNQNSVDYLCNFSSRKYPSKSSVFTPIRCGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIVIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALTQFD
cccccccccccccccccHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHccccccEEEEEccccccccHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccCEEEEECcccccccccccccccccHHHHHHHHHHccccccHHHcccccccccccccccEECccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
*********************************************F****CGLRELKERLNTVKNTQKITEAMKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIVIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAMSTATDNADELKKNLSVAYNQERQAKITGELLEIVAGAEALT***
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MSCSYLTTWVSSKSNLSSHLLHLNQNSVDYLCNFSSRKYPSKSSVFTPIRCGxxxxxxxxxxxxxxxxxxxxxKLVAAARVRKAQEAVISSRPFVEKLVEFLYVINEQLQLDDIDVPLTNIRPVKKVAIVIITGDRGLCGGFNKAVIKKAENRMVELKDMGLDCVVISVGKKGNAYFRHRSNVSVIRCIEGEGFYTVKEAQTIADNVFSLFVSEEVDKVELVYTKFVSLVKSDPVIHTLLPLSMKGVICNENGMCVDAVEDELFRLTTNEGKMIVERDSVTFNKGELSPLMLFEQDPAQILDAMMPLYMNSQILRALQESFASEVAARMSAxxxxxxxxxxxxxxxxxxxxxERQAKITGELLEIVAGAEALTQFD

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ATP synthase gamma chain 2, chloroplastic Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.confidentQ01909
ATP synthase gamma chain Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.probableB0BZL3
ATP synthase gamma chain The complex from the organism is particularly stable to disruption and remains functional after 6 hrs at 55 degrees Celsius.probableQ8DLU1

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2QE7, chain G
Confidence level:very confident
Coverage over the Query: 52-98,115-244,304-353
View the alignment between query and template
View the model in PyMOL
Template: 3OE7, chain G
Confidence level:confident
Coverage over the Query: 53-113,125-235,252-294,307-371
View the alignment between query and template
View the model in PyMOL