Citrus Sinensis ID: 017144

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
Protein Sequence
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Secondary Structure (PSIPRED)
cccEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccEEEEcccccccccccccccccccccccccccEEEEEEEEEccHHHHHHHHHHccccEEEEEEEcccccEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEccHHHHHHHHHHcccEEEEccccccccccEEEEEEcccccEEEEEEccccccccccEEEEEccHHHHHHHHHHccccEEEEEEccccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEccccHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEcccccccccccccccccccccccccccccccccccccEEccccccHHHHHHHHHcHccHHHHcccccHHHHHccccccccccccccccccccccHHHHHHcccccccEEEEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEccccccccEEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHcccEEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEEcccccccEEEEEEEccccEEcccccEEEEEEEccccHHHHHHHHHHccccEEcccccccccccEEEEEEcccccEEEEEccHHHHHHcc
Coil and Loop (DISEMBL)
mlrtlpiaspssltvstynktslpsqsslklspfcvnndggnnisyCYSTSRRLALFQLgaaipqshfFGAKALKLLRAegstieastsgnmaptsntvteqnVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMkllrkrdipedrytnaflgygpedsHFVVELTYnygvdkydigtgfghfgiAVEDVAKTVDLVKAkggkvtrepgpvkggntviafiedpdgykfellergptpeplcQVMLRVGDLDRAINFYKKAFGMELlrkrdnpdykYTIAVMGYGPEDKNAVLELTYnhgvteydkgngyaqiaigtdDVYKTAEAIKLsggkitrepgplpgintkitacldpdgwksvFVDNLDFLKELE
Flexible Loop (DISEMBL)
mlrtlpiaspssltvsTYNKTslpsqsslklsPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIeastsgnmaptsntvteqnvldwvksdkrrMLHVVyrvgdldktikFYTECLGmkllrkrdipeDRYTNAFlgygpedsHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKakggkvtrepgpvkggntvIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKafgmellrkrdnpdYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLsggkitrepgplpGINTKITacldpdgwkSVFVDNLDFLKELE
Low Complexity Region (SEG)
MLRTLPIASPSSLTVSTYNKTslpsqsslklspFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Disordered region (IsUnstruct)
*******************************SPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRA*********************EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL****
Disordered Region (DISOPRED)
******************************************************ALFQLGAAIPQ**********LLRAEGS***********************DWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL****
Disordered Region (DISEMBL)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Disordered Region (DISPRO)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	376	2.2.26 [Sep-21-2011]
Q8W593	350	Probable lactoylglutathio	yes	no	0.869	0.934	0.791	1e-155
Q948T6	291	Lactoylglutathione lyase	no	no	0.757	0.979	0.707	1e-121
Q39366	282	Putative lactoylglutathio	N/A	no	0.726	0.968	0.715	1e-118
P0AC83	135	Lactoylglutathione lyase	yes	no	0.329	0.918	0.588	9e-40
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.329	0.918	0.588	9e-40
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.329	0.918	0.588	9e-40
Q55595	131	Probable lactoylglutathio	N/A	no	0.327	0.938	0.593	1e-39
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.329	0.918	0.564	7e-39
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.329	0.918	0.564	7e-39
P44638	135	Lactoylglutathione lyase	yes	no	0.351	0.977	0.575	1e-38

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  548 bits (1411), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/336 (79%), Positives = 291/336 (86%), Gaps = 9/336 (2%)

Query: 47  CYSTSRRLALFQLGA------AIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVT 100
           C+S S R  +  L         +PQS  FG  + KLLR   + +  + SG  A      T
Sbjct: 18  CFSDSPRFPISLLSRNLSRTLHVPQSQLFGLTSHKLLRRSVNCLGVAESGKAA---QATT 74

Query: 101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
           + ++L WVK+DKRRMLHVVYRVGD+D+TIKFYTECLGMKLLRKRDIPE++YTNAFLGYGP
Sbjct: 75  QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP 134

Query: 161 EDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNT 220
           EDSHFV+ELTYNYGVDKYDIG GFGHFGIAV+DVAKTV+LVKAKGGKV+REPGPVKGG T
Sbjct: 135 EDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKT 194

Query: 221 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAI FY+KAFGMELLR RDNP+YK
Sbjct: 195 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYK 254

Query: 281 YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR 340
           YTIA+MGYGPEDK  VLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIKL GGKITR
Sbjct: 255 YTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITR 314

Query: 341 EPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 376
           EPGPLPGI+TKITACLDPDGWKSVFVDN+DFLKELE
Sbjct: 315 EPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  435 bits (1118), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/294 (70%), Positives = 245/294 (83%), Gaps = 9/294 (3%)

Query: 88  TSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP 147
            SG+ A  S  V    VL+W K DK+R+LH VYRVGDLD+TIK YTEC GMKLLRKRD+P
Sbjct: 2   ASGSEAEKSPEV----VLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVP 57

Query: 148 EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGG- 206
           E++YTNAFLG+GPED++F +ELTYNYGVDKYDIG GFGHF IA EDV K  + +K+    
Sbjct: 58  EEKYTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCC 117

Query: 207 KVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAF 266
           K+TREPGPVKGG+TVIAF +DPDGY FEL++RGPTPEPLCQVMLRVGDLDR+I FY+KA 
Sbjct: 118 KITREPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAL 177

Query: 267 GMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK 326
           GM+LLRK+D PDYKYTIA++GY  EDK  V+ELTYN+GVTEY KGN YAQ+AIGT+DVYK
Sbjct: 178 GMKLLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYK 237

Query: 327 TAEAIKLS----GGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 376
           +AEA++L     GGKI R+PGPLPG+NTKI + LDPDGWK V VDN DFLKEL+
Sbjct: 238 SAEAVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  424 bits (1091), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/278 (71%), Positives = 236/278 (84%), Gaps = 5/278 (1%)

Query: 103 NVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED 162
           ++++W K DKRR LHVVYRVGDLD+TI+FYTEC GMK+LRKRD+PE++Y+NAFLG+GPE 
Sbjct: 6   DLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGFGPET 65

Query: 163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
           S+FVVELTYNYGV  YDIGTGFGHF I+ +DV+K V+ V+AKGG VTREPGPVKGG +VI
Sbjct: 66  SNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGGGSVI 125

Query: 223 AFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT 282
           AF++DPDGY FEL++RGPTPEPLCQVMLRVGDLDRA+ F +KA GM LLR+ + P+Y  T
Sbjct: 126 AFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPEYN-T 184

Query: 283 IAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLS----GGKI 338
           I +MGY  E ++ VLELTYN+GVTEY KGN YAQIAIGTDDVYK+AE +K+     GGKI
Sbjct: 185 IGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQELGGKI 244

Query: 339 TREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 376
           TRE GPLPG+ TKI + LDPDGWK V VDN DFLKELE
Sbjct: 245 TREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Brassica oleracea var. gemmifera (taxid: 178616)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  164 bits (416), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  164 bits (416), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  164 bits (416), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q55595|LGUL_SYNY3 Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gloA PE=3 SV=1

 Score =  164 bits (414), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 95/123 (77%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
           +LH + RVGDLDK+++FY + LGM LLRK+D P   +T AF+GYG E  + V+ELT+N+G
Sbjct: 3   LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWG 62

Query: 175 VDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
            DKYD+G GFGH  + VED+  T D ++ KGGKV REPGP+K G TVIAF+EDPDGYK E
Sbjct: 63  TDKYDLGNGFGHIALGVEDIYSTCDKIRDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIE 122

Query: 235 LLE 237
           L++
Sbjct: 123 LIQ 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  161 bits (408), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 95/124 (76%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GV+ YD+G  +GH  ++V++ A+  + ++  GG VTRE GPVKGG+T+IAF+EDPDGYK 
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  161 bits (408), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 70/124 (56%), Positives = 95/124 (76%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GV+ YD+G  +GH  ++V++ A+  + ++  GG VTRE GPVKGG+T+IAF+EDPDGYK 
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P44638|LGUL_HAEIN Lactoylglutathione lyase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=gloA PE=1 SV=1

 Score =  160 bits (406), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 76/132 (57%), Positives = 97/132 (73%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++LH + RVGDLD++IKFY + LGM+LLR  + PE +YT AFLGY   +S   +ELTYN+
Sbjct: 2   QILHTMLRVGDLDRSIKFYQDVLGMRLLRTSENPEYKYTLAFLGYEDGESAAEIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY+ GT +GH  I V+D+  T + V+A GG VTRE GPVKGG+TVIAF+EDPDGYK 
Sbjct: 62  GVDKYEHGTAYGHIAIGVDDIYATCEAVRASGGNVTREAGPVKGGSTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           E +E   T   L
Sbjct: 122 EFIENKSTKSGL 133

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	376
359484559	362	PREDICTED: probable lactoylglutathione l	0.960	0.997	0.758	1e-165
449443163	362	PREDICTED: probable lactoylglutathione l	0.962	1.0	0.755	1e-165
225429965	364	PREDICTED: probable lactoylglutathione l	0.869	0.898	0.851	1e-164
296081860	359	unnamed protein product [Vitis vinifera]	0.869	0.910	0.851	1e-164
225445150	355	PREDICTED: probable lactoylglutathione l	0.882	0.935	0.823	1e-163
255546389	369	lactoylglutathione lyase, putative [Rici	0.845	0.861	0.851	1e-161
255550986	389	lactoylglutathione lyase, putative [Rici	0.867	0.838	0.797	1e-160
224119744	355	predicted protein [Populus trichocarpa]	0.936	0.991	0.748	1e-160
357520937	347	Lactoylglutathione lyase [Medicago trunc	0.920	0.997	0.716	1e-159
449530241	354	PREDICTED: probable lactoylglutathione l	0.930	0.988	0.75	1e-158

>gi|359484559|ref|XP_003633121.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 2 [Vitis vinifera] gi|297738782|emb|CBI28027.3| unnamed protein product [Vitis vinifera]

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 286/377 (75%), Positives = 323/377 (85%), Gaps = 16/377 (4%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R +P+A+    ++S++   S  S+    LS F +              SR +    +G
Sbjct: 1   MVRIIPMATSFRPSLSSFG-FSTSSRLGFPLSTFNI--------------SRTVTSLHVG 45

Query: 61  AAIPQSHFFGAKALKLLRA-EGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
           +AIPQS  FG  A KLLR  EG+ +  + +GN+A  S +  ++NVL+WVK DKRRMLHVV
Sbjct: 46  SAIPQSQIFGLNASKLLRGGEGNAMGFNATGNIAHASTSAAQENVLEWVKKDKRRMLHVV 105

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLR+RDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVDKYD
Sbjct: 106 YRVGDLDRTIKFYTECLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYD 165

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IG GFGHFGIAVEDV KTVDL+KAKGGKVTREPGPVKGG+TVIAFIEDPDGYKFELLERG
Sbjct: 166 IGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKGGSTVIAFIEDPDGYKFELLERG 225

Query: 240 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL 299
           PTPEPLCQVMLRVGDLDR+INFY+KAFGMELLRKRDNP+YKYTIA+MGYGPEDKNAVLEL
Sbjct: 226 PTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDKNAVLEL 285

Query: 300 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 359
           TYN+GV+EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC+DPD
Sbjct: 286 TYNYGVSEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACVDPD 345

Query: 360 GWKSVFVDNLDFLKELE 376
           GWKSVFVDN+DFLKEL+
Sbjct: 346 GWKSVFVDNIDFLKELD 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443163|ref|XP_004139350.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 284/376 (75%), Positives = 327/376 (86%), Gaps = 14/376 (3%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R  P+AS S            PS S+ + + F   +  G ++S  ++T+RR+AL QLG
Sbjct: 1   MVRITPMASFSVR----------PSLSAFRFAGF---SRSGLSLS-SFNTTRRIALLQLG 46

Query: 61  AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVY 120
           +A+PQS +FG KA  +LR EGS I  + +GN A  S + + +N+LDWVK DKRRMLHVVY
Sbjct: 47  SAVPQSQYFGLKAFDMLRGEGSNIGMTVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVY 106

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
           RVGDLDKTIKFYTECLGMKLLRKRDIPE++YTNAFLG+GPEDSHFV+ELTYNYGVDKYDI
Sbjct: 107 RVGDLDKTIKFYTECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYNYGVDKYDI 166

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 240
           GT FGHFGIAVEDV KTV+L+KAKGGKVTRE GPVKGG TVIAF+EDPDGYKFEL+ERGP
Sbjct: 167 GTAFGHFGIAVEDVYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYKFELIERGP 226

Query: 241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT 300
           TPEPLCQVMLRVGDLDR+I+FYKKA+GMELLRKRDNPDYKYTIA+MGYGPEDKNAV+ELT
Sbjct: 227 TPEPLCQVMLRVGDLDRSIDFYKKAYGMELLRKRDNPDYKYTIAMMGYGPEDKNAVMELT 286

Query: 301 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           YN+GVT+Y+KGN YAQIAIGTDDVY+TAEA+KLSGGK+TREPGPLPGINTKITACLDPDG
Sbjct: 287 YNYGVTDYEKGNAYAQIAIGTDDVYRTAEAVKLSGGKVTREPGPLPGINTKITACLDPDG 346

Query: 361 WKSVFVDNLDFLKELE 376
           WK+VFVDN+DFLKELE
Sbjct: 347 WKTVFVDNVDFLKELE 362

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429965|ref|XP_002283968.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Vitis vinifera]

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 280/329 (85%), Positives = 302/329 (91%), Gaps = 2/329 (0%)

Query: 48  YSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW 107
           +++SRRLALF LG AIPQS   G K LKL R EG+ +EA T+GNMA  +  V+E NVL+W
Sbjct: 38  FTSSRRLALFHLGTAIPQSELLGGKTLKLFRMEGNMLEAGTAGNMAQAA--VSEGNVLEW 95

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            K+DKRRMLHVVYRVG+LDKT+KFYTECLGMKLLR+ DIPE+RY NAFLGYGPEDSHFVV
Sbjct: 96  AKTDKRRMLHVVYRVGNLDKTMKFYTECLGMKLLRRCDIPEERYANAFLGYGPEDSHFVV 155

Query: 168 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
           ELTYNYGVDK DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG TVIAF+ED
Sbjct: 156 ELTYNYGVDKIDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGKTVIAFVED 215

Query: 228 PDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMG 287
           PDGYKFELLER PTPEPLCQVMLRVGDLDR+I FY+KAFGMELLRKRDNP+YKYTIA+MG
Sbjct: 216 PDGYKFELLEREPTPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRKRDNPEYKYTIAMMG 275

Query: 288 YGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 347
           YGPEDK+AVLELTYN+GV EYDKGNGYAQIAIGTDDVYKTAEAI+L GGKITREPGPLP 
Sbjct: 276 YGPEDKSAVLELTYNYGVLEYDKGNGYAQIAIGTDDVYKTAEAIRLCGGKITREPGPLPV 335

Query: 348 INTKITACLDPDGWKSVFVDNLDFLKELE 376
           INTKITACLDPDGWKSVFVDN DFLKELE
Sbjct: 336 INTKITACLDPDGWKSVFVDNADFLKELE 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081860|emb|CBI20865.3| unnamed protein product [Vitis vinifera]

 Score =  584 bits (1505), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 280/329 (85%), Positives = 302/329 (91%), Gaps = 2/329 (0%)

Query: 48  YSTSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW 107
           +++SRRLALF LG AIPQS   G K LKL R EG+ +EA T+GNMA  +  V+E NVL+W
Sbjct: 33  FTSSRRLALFHLGTAIPQSELLGGKTLKLFRMEGNMLEAGTAGNMAQAA--VSEGNVLEW 90

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            K+DKRRMLHVVYRVG+LDKT+KFYTECLGMKLLR+ DIPE+RY NAFLGYGPEDSHFVV
Sbjct: 91  AKTDKRRMLHVVYRVGNLDKTMKFYTECLGMKLLRRCDIPEERYANAFLGYGPEDSHFVV 150

Query: 168 ELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
           ELTYNYGVDK DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG TVIAF+ED
Sbjct: 151 ELTYNYGVDKIDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGKTVIAFVED 210

Query: 228 PDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMG 287
           PDGYKFELLER PTPEPLCQVMLRVGDLDR+I FY+KAFGMELLRKRDNP+YKYTIA+MG
Sbjct: 211 PDGYKFELLEREPTPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRKRDNPEYKYTIAMMG 270

Query: 288 YGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 347
           YGPEDK+AVLELTYN+GV EYDKGNGYAQIAIGTDDVYKTAEAI+L GGKITREPGPLP 
Sbjct: 271 YGPEDKSAVLELTYNYGVLEYDKGNGYAQIAIGTDDVYKTAEAIRLCGGKITREPGPLPV 330

Query: 348 INTKITACLDPDGWKSVFVDNLDFLKELE 376
           INTKITACLDPDGWKSVFVDN DFLKELE
Sbjct: 331 INTKITACLDPDGWKSVFVDNADFLKELE 359

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445150|ref|XP_002284023.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like isoform 1 [Vitis vinifera]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/339 (82%), Positives = 307/339 (90%), Gaps = 7/339 (2%)

Query: 45  SYCYSTSRRLAL----FQLGA--AIPQSHFFGAKALKLLRA-EGSTIEASTSGNMAPTSN 97
           S+ +STS RL      F +    +IPQS  FG  A KLLR  EG+ +  + +GN+A  S 
Sbjct: 17  SFGFSTSSRLGFPLSTFNISRTLSIPQSQIFGLNASKLLRGGEGNAMGFNATGNIAHAST 76

Query: 98  TVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLG 157
           +  ++NVL+WVK DKRRMLHVVYRVGDLD+TIKFYTECLGMKLLR+RDIPE+RYTNAFLG
Sbjct: 77  SAAQENVLEWVKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRRRDIPEERYTNAFLG 136

Query: 158 YGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG 217
           YGPEDSHFV+ELTYNYGVDKYDIG GFGHFGIAVEDV KTVDL+KAKGGKVTREPGPVKG
Sbjct: 137 YGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVEDVTKTVDLIKAKGGKVTREPGPVKG 196

Query: 218 GNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP 277
           G+TVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDR+INFY+KAFGMELLRKRDNP
Sbjct: 197 GSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNP 256

Query: 278 DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK 337
           +YKYTIA+MGYGPEDKNAVLELTYN+GV+EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK
Sbjct: 257 EYKYTIAMMGYGPEDKNAVLELTYNYGVSEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGK 316

Query: 338 ITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 376
           ITREPGPLPGINTKITAC+DPDGWKSVFVDN+DFLKEL+
Sbjct: 317 ITREPGPLPGINTKITACVDPDGWKSVFVDNIDFLKELD 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546389|ref|XP_002514254.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223546710|gb|EEF48208.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 275/323 (85%), Positives = 296/323 (91%), Gaps = 5/323 (1%)

Query: 59  LGAAIPQSHFFGAKAL-KLLRAEGST----IEASTSGNMAPTSNTVTEQNVLDWVKSDKR 113
           LG+A+PQSHFFG KA  K  R E ST    +  + +GNMA  S   ++++ L+W KSDKR
Sbjct: 47  LGSAVPQSHFFGLKATSKPWRGEISTSSSGLGVAATGNMAQASTFASQESALEWAKSDKR 106

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           RMLHVVYRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNY
Sbjct: 107 RMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNY 166

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKYDIGT FGHFGIAVEDVAKTV+L+KAKGGKVTREP PVKGG TVIAFIEDPDGYKF
Sbjct: 167 GVDKYDIGTAFGHFGIAVEDVAKTVELIKAKGGKVTREPAPVKGGKTVIAFIEDPDGYKF 226

Query: 234 ELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK 293
           ELLERGPTPEPLCQVMLRVGDLDR+INFY+KAFGMELLRKRDNP+YKYTIA+MGYGPEDK
Sbjct: 227 ELLERGPTPEPLCQVMLRVGDLDRSINFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDK 286

Query: 294 NAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKIT 353
           NAVLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAE IKL GGKITREPGPLPGINTKIT
Sbjct: 287 NAVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEGIKLFGGKITREPGPLPGINTKIT 346

Query: 354 ACLDPDGWKSVFVDNLDFLKELE 376
           ACLDPDGWKSVFVDN+DFLKELE
Sbjct: 347 ACLDPDGWKSVFVDNIDFLKELE 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550986|ref|XP_002516541.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223544361|gb|EEF45882.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 260/326 (79%), Positives = 303/326 (92%)

Query: 51  SRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKS 110
           SRRLALFQLGAA+P+SH  G +A KLLR +G+T EASTS  MA  S  + EQNVL+WV +
Sbjct: 64  SRRLALFQLGAALPESHLLGGRASKLLRVDGNTSEASTSSKMASMSTALAEQNVLEWVSN 123

Query: 111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT 170
           DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR+IPE+RY+NAFLGYGPE+S+F VELT
Sbjct: 124 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRNIPEERYSNAFLGYGPEESNFTVELT 183

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
           YNYG+DKY+IG GFGHFGIAVEDV KTV+LVKAKGG++TR+ GPVKGG ++IA+++DPDG
Sbjct: 184 YNYGIDKYNIGNGFGHFGIAVEDVVKTVNLVKAKGGRITRDSGPVKGGGSIIAYVQDPDG 243

Query: 231 YKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGP 290
           Y FELLERGPTPEPLCQVMLRVGDL+R++NFYKKAFG++LLRKRD+P+ KY++A+MGYGP
Sbjct: 244 YTFELLERGPTPEPLCQVMLRVGDLERSVNFYKKAFGLQLLRKRDDPESKYSVAIMGYGP 303

Query: 291 EDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINT 350
           EDKNAVLELTYN+G+TEY+KG+GYAQIAIGT+DVYK+AEAIKL GG+I REPGPLPGINT
Sbjct: 304 EDKNAVLELTYNYGITEYEKGDGYAQIAIGTNDVYKSAEAIKLCGGEIIREPGPLPGINT 363

Query: 351 KITACLDPDGWKSVFVDNLDFLKELE 376
           KITACLDPDGWKSVFVDN+DFL+ELE
Sbjct: 364 KITACLDPDGWKSVFVDNVDFLRELE 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119744|ref|XP_002331150.1| predicted protein [Populus trichocarpa] gi|222873233|gb|EEF10364.1| predicted protein [Populus trichocarpa]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/377 (74%), Positives = 315/377 (83%), Gaps = 25/377 (6%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R +P+ S SS+  S+Y          L  S F   N          + SRR A   L 
Sbjct: 1   MVRIIPMVS-SSIRPSSY----------LTCSSFMFCN--------ACAPSRRFAY--LA 39

Query: 61  AAIPQSHFFGAKAL-KLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
            A+PQSHFFG KA  K+ R E  TI    +GNMA  S   T++++L+WVK DKRRMLHVV
Sbjct: 40  TAVPQSHFFGLKASSKIWRGESRTI---ATGNMAQASTAATQESLLEWVKKDKRRMLHVV 96

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVD YD
Sbjct: 97  YRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDSYD 156

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IG GFGHFGIAVEDVAKTV+L+KAKGGKV REPGPVKGG+TVIAFIEDPDGYKFELLERG
Sbjct: 157 IGAGFGHFGIAVEDVAKTVELIKAKGGKVNREPGPVKGGSTVIAFIEDPDGYKFELLERG 216

Query: 240 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL 299
           PTPEPLCQVMLRVGDLDR+INFY+KAFGM+LLRKRDNP+YKYTIA+MGYG EDKN VLEL
Sbjct: 217 PTPEPLCQVMLRVGDLDRSINFYEKAFGMKLLRKRDNPEYKYTIAMMGYGSEDKNCVLEL 276

Query: 300 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 359
           TYN+GVTEYDKGN YAQIAIGTDDVY+TAEA+++ GGK+TREPGPLPGINTKITACLDPD
Sbjct: 277 TYNYGVTEYDKGNAYAQIAIGTDDVYRTAEAVEIFGGKVTREPGPLPGINTKITACLDPD 336

Query: 360 GWKSVFVDNLDFLKELE 376
           GWK+VFVDN+DFLKELE
Sbjct: 337 GWKTVFVDNIDFLKELE 353

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520937|ref|XP_003630757.1| Lactoylglutathione lyase [Medicago truncatula] gi|355524779|gb|AET05233.1| Lactoylglutathione lyase [Medicago truncatula]

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 270/377 (71%), Positives = 311/377 (82%), Gaps = 31/377 (8%)

Query: 1   MLRTLPIASPSSL-TVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQL 59
           M+R +PIAS S L T+S +N+T                               R++    
Sbjct: 1   MVRVIPIASSSILPTLSLFNRTP------------------------------RISFSHF 30

Query: 60  GAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVV 119
             A+PQSH FG KA +L +  G++++  +SGN++ +    + +NVL+WVK DKRRMLHVV
Sbjct: 31  STAVPQSHNFGLKACRLFKQNGNSLKVMSSGNVSSSVTAASPENVLEWVKQDKRRMLHVV 90

Query: 120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
           YRVGDLD+TIKFYTECLGMKLLRKRDIPE+RYTNAFLGYGPEDSHFV+ELTYNYGVDKYD
Sbjct: 91  YRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYD 150

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           IGT FGHFGIAV+D+ KTV+L++AKGGK+TREPGPVKGG TVIAF+EDPDGYKFELLERG
Sbjct: 151 IGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERG 210

Query: 240 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL 299
           PTPEPLCQVMLRVGDL+R+I FY+KAFGMELLR RDNPD KYTIA++GYGPEDK+ VLEL
Sbjct: 211 PTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPDNKYTIAMLGYGPEDKSTVLEL 270

Query: 300 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 359
           TYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIKLS GK+TREPGPLPGINTKITACLDPD
Sbjct: 271 TYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGINTKITACLDPD 330

Query: 360 GWKSVFVDNLDFLKELE 376
           GWK+VFVDN+DFLKELE
Sbjct: 331 GWKTVFVDNIDFLKELE 347

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449530241|ref|XP_004172104.1| PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Cucumis sativus]

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 273/364 (75%), Positives = 315/364 (86%), Gaps = 14/364 (3%)

Query: 1   MLRTLPIASPSSLTVSTYNKTSLPSQSSLKLSPFCVNNDGGNNISYCYSTSRRLALFQLG 60
           M+R  P+AS S            PS S+ + + F   +  G ++S  ++T+RR+AL QLG
Sbjct: 1   MVRITPMASFSVR----------PSLSAFRFAGF---SRSGLSLS-SFNTTRRIALLQLG 46

Query: 61  AAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVY 120
           +A+PQS +FG KA  +LR EGS I  + +GN A  S + + +N+LDWVK DKRRMLHVVY
Sbjct: 47  SAVPQSQYFGLKAFDMLRGEGSNIGMTVAGNAAQASTSSSSENLLDWVKQDKRRMLHVVY 106

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
           RVGDLDKTIKFYTECLGMKLLRKRDIPE++YTNAFLG+GPEDSHFV+ELTYNYGVDKYDI
Sbjct: 107 RVGDLDKTIKFYTECLGMKLLRKRDIPEEKYTNAFLGFGPEDSHFVIELTYNYGVDKYDI 166

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 240
           GT FGHFGIAVEDV KTV+L+KAKGGKVTRE GPVKGG TVIAF+EDPDGYKFEL+ERGP
Sbjct: 167 GTAFGHFGIAVEDVYKTVELIKAKGGKVTREAGPVKGGRTVIAFVEDPDGYKFELIERGP 226

Query: 241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT 300
           TPEPLCQVMLRVGDLDR+I+FYKKA+GMELLRKRDNPDYKYTIA+MGYGPEDKNAV+ELT
Sbjct: 227 TPEPLCQVMLRVGDLDRSIDFYKKAYGMELLRKRDNPDYKYTIAMMGYGPEDKNAVMELT 286

Query: 301 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           YN+GVT+Y+KGN YAQIAIGTDDVY+TAEA+KLSGGK+TREPGPLPGINTKITACLDPDG
Sbjct: 287 YNYGVTDYEKGNAYAQIAIGTDDVYRTAEAVKLSGGKVTREPGPLPGINTKITACLDPDG 346

Query: 361 WKSV 364
           WK+V
Sbjct: 347 WKTV 350

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	376
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.869	0.934	0.791	6.8e-143
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.329	0.918	0.588	7.8e-39
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.329	0.898	0.588	1e-36
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.329	0.898	0.588	1e-36
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.329	0.911	0.572	2.1e-36
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.329	0.911	0.552	2.4e-35
ZFIN|ZDB-GENE-040912-38	298	glod4 "glyoxalase domain conta	0.646	0.815	0.335	2.8e-27
FB|FBgn0031143	293	CG1532 [Drosophila melanogaste	0.654	0.839	0.307	6.8e-24
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.654	0.825	0.291	2.9e-23
UNIPROTKB|F1RHJ9	496	GLOD4 "Uncharacterized protein	0.651	0.493	0.314	4.2e-23

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1397 (496.8 bits), Expect = 6.8e-143, P = 6.8e-143
 Identities = 266/336 (79%), Positives = 292/336 (86%)

Query:    47 CYSTSRRLALFQLGAA------IPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVT 100
             C+S S R  +  L         +PQS  FG  + KLLR   + +  + SG  A  +   T
Sbjct:    18 CFSDSPRFPISLLSRNLSRTLHVPQSQLFGLTSHKLLRRSVNCLGVAESGKAAQAT---T 74

Query:   101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
             + ++L WVK+DKRRMLHVVYRVGD+D+TIKFYTECLGMKLLRKRDIPE++YTNAFLGYGP
Sbjct:    75 QDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP 134

Query:   161 EDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNT 220
             EDSHFV+ELTYNYGVDKYDIG GFGHFGIAV+DVAKTV+LVKAKGGKV+REPGPVKGG T
Sbjct:   135 EDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKT 194

Query:   221 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
             VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAI FY+KAFGMELLR RDNP+YK
Sbjct:   195 VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYK 254

Query:   281 YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR 340
             YTIA+MGYGPEDK  VLELTYN+GVTEYDKGN YAQIAIGTDDVYKTAEAIKL GGKITR
Sbjct:   255 YTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLFGGKITR 314

Query:   341 EPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 376
             EPGPLPGI+TKITACLDPDGWKSVFVDN+DFLKELE
Sbjct:   315 EPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 73/124 (58%), Positives = 97/124 (78%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   234 ELLE 237
             EL+E
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDLDK+I+FYT+ +GM LLRK +  E +YT AFLGYG E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV  Y+ G  +GH  I V+D+  T D +KA GG VTREPGPVKGG T IAF++DPDGY  
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   234 ELLE 237
             EL++
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVGDLDK+I+FYT+ +GM LLRK +  E +YT AFLGYG E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV  Y+ G  +GH  I V+D+  T D +KA GG VTREPGPVKGG T IAF++DPDGY  
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   234 ELLE 237
             EL++
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 71/124 (57%), Positives = 96/124 (77%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
             R+LH + RVG+L+K+++FY + LGMKLLRK +  E +YT AF+GY  ED + V+ELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:   174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             GV+KY++GT FGH  I V+DV +TV+ ++  GGKV RE  PV GG TVIAF+EDPD YK 
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   234 ELLE 237
             EL++
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 69/125 (55%), Positives = 93/125 (74%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYN 172
             ++LH + RVG+L+++I FYT+ LGMKLLR  + PE +Y+ AF+GYG E +   V+ELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:   173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             +G +KYD+GTGFGH  I  +D+    + + A GGKVTR PGPV GG T IAF+EDPDGYK
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   233 FELLE 237
              E ++
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

ZFIN|ZDB-GENE-040912-38 glod4 "glyoxalase domain containing 4" [Danio rerio (taxid:7955)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 92/274 (33%), Positives = 135/274 (49%)

Query:   113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
             +R LH V++VGD  KT  FY + LGMK+LR  +           P D +++   +G+GPE
Sbjct:     4 KRALHFVFKVGDRTKTATFYRDVLGMKILRHEEFEEGCKATCNGPYDGKWSKTMVGFGPE 63

Query:   162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
             D HFV ELTYNYGV +Y +G  F   G+ ++  A+ V   K     +T+       G+ +
Sbjct:    64 DDHFVAELTYNYGVGEYRLGNDF--LGLTLQS-AQAVSNAKRLNWPLTQV------GDCL 114

Query:   222 IAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
                 E P GY+F L+++  P  +P+ +V L V DL R+++++    GM+++ K  N D K
Sbjct:   115 Y-MTEAPGGYRFYLIDKEQPNSDPVQKVSLAVSDLQRSVHYWSGLLGMKVIEK--NEDKK 171

Query:   281 YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR 340
               IAVMG+   D    LEL    G  ++    G    A   D +      +K    KI  
Sbjct:   172 --IAVMGFS--DNQCKLELQDIGGAVDHGTAFGRIAFACPRDQLPDIEALMKKDSEKIIT 227

Query:   341 EPGPL--PGINTKITACL-DPDGWKSVFVDNLDF 371
                 L  PG  T     L DPDG +  FV +  F
Sbjct:   228 PLVSLDTPGKATVEVVILGDPDGHEICFVGDEAF 261

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0031143 CG1532 [Drosophila melanogaster (taxid:7227)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 86/280 (30%), Positives = 131/280 (46%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPED 162
             R LH V+++GD  K   F+ + LGM +LR  +  E           +R++   +GYGPE 
Sbjct:    12 RALHYVFKIGDRAKNAFFFRQILGMTVLRHEEFKEGCDAACNGPYDNRWSKTMVGYGPES 71

Query:   163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
             SHFV+ELTYNYGV  Y++G  FG   I  +D+   +         VT+  G  K G+   
Sbjct:    72 SHFVIELTYNYGVSSYEMGNDFGGVTIHSKDI---LSRAAEHSYPVTQVSG--KAGS--- 123

Query:   223 AFIEDPDGYKFELLERGP-TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKY 281
               +  PDGYKF ++++   + +P+  V L V +L  +  ++     +++L + +      
Sbjct:   124 -LLTSPDGYKFYVIDQASASSDPVQSVELNVSNLQNSRKYWHDLLQLKVLEENE------ 176

Query:   282 TIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITRE 341
                 + YG  ++ A LE+T         K  G    AI         EA+K +GG I   
Sbjct:   177 ASVRLSYG--EQQASLEITQISEPINRAKAYGRIAFAIPAAQQPPLQEAVKAAGGAILTP 234

Query:   342 PGPL--PGINTKITACL-DPDGWKSVFVDNLDF--LKELE 376
                L  PG  T     L DPDG +  FVD   F  L ++E
Sbjct:   235 LITLDTPGKATVTVVILGDPDGHEICFVDEEGFGQLSQVE 274

GO:0022008 "neurogenesis" evidence=IMP

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 81/278 (29%), Positives = 134/278 (48%)

Query:   113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
             RR LH V++VG+  +T+ F+ + LGM++LR  +           P D +++   +G+GPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:   162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
             D HFV ELTYNYG+  Y +G  F   G+ +   A +  +  A+     R   P+      
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDF--MGLTL---ASSQAVSNAR-----RLEWPLSKVAEG 113

Query:   222 IAFIEDPDGYKFELLERGPTP-EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
             +   E P GYKF L +R P+  +P+ +V L V DL +++N++    GM++  + +   + 
Sbjct:   114 VFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQDEEKKW- 172

Query:   281 YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR 340
                A++GY   D    LEL    G  ++    G    +    ++    + +K     I  
Sbjct:   173 ---ALLGYA--DDQCKLELQGIQGAVDHSAAFGRIAFSCPQKELPDLEDLMKRESQSILT 227

Query:   341 EPGPL--PGINT-KITACLDPDGWKSVFVDNLDFLKEL 375
                 L  PG  T ++    DPDG +  FV +  F +EL
Sbjct:   228 PLVSLDTPGKATVQVVILADPDGHEICFVGDEAF-REL 264

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|F1RHJ9 GLOD4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 272 (100.8 bits), Expect = 4.2e-23, P = 4.2e-23
 Identities = 87/277 (31%), Positives = 132/277 (47%)

Query:   114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPED 162
             R LH V++VG+  +T  FY + LGMK+LR  +           P D +++   +G+GPED
Sbjct:   203 RALHFVFKVGNRFQTAYFYRDVLGMKILRHEEFDEGCKAACNGPYDGKWSKTMVGFGPED 262

Query:   163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
              HFV ELTYNYG+  Y +G  F   GI +   A +  +  A+  K+      V  G   +
Sbjct:   263 DHFVAELTYNYGIGNYKLGNDF--MGITL---ASSQAVSNAR--KLEWPLSEVAEG---V 312

Query:   223 AFIEDPDGYKFELLERGPT-PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKY 281
                E P GYKF L    P   +P+ +V L V DL +++N++    GM++  K    D K 
Sbjct:   313 YETEAPGGYKFYLQNCSPPRSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEK----DEKT 368

Query:   282 TIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITRE 341
               A++GY   D    LEL    G  ++    G    +    ++ +  + +K    KI   
Sbjct:   369 QRALLGYA--DNQCKLELQGIQGAVDHAAAFGRIAFSCPQKELPELEDLMKRENQKILTP 426

Query:   342 PGPL--PGINT-KITACLDPDGWKSVFVDNLDFLKEL 375
                L  PG  T ++    DPDG +  FV +  F +EL
Sbjct:   427 LVSLDTPGKATVQVVILADPDGHEICFVGDEAF-REL 462

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.7916	0.8696	0.9342	yes	no
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.7158	0.7260	0.9680	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.946
3rd Layer	2.5.1	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	376
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	2e-84
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	2e-58
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	6e-51
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	2e-47
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	1e-39
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	3e-38
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	6e-31
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	6e-28
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	1e-23
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-22
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	5e-18
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	5e-17
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-15
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	3e-14
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	8e-14
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	3e-13
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	4e-12
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	9e-12
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	8e-11
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	4e-10
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	4e-09
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	5e-09
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	7e-09
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	9e-09
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	1e-08
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	1e-08
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-08
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	2e-08
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	3e-08
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	4e-08
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	2e-07
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	3e-07
TIGR01263	353	TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygen	2e-06
cd07267	113	cd07267, THT_Oxygenase_N, N-terminal domain of 2,4	4e-06
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	4e-06
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	5e-06
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	9e-06
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	2e-05
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	2e-05
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	2e-05
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	3e-05
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	3e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	3e-05
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	4e-05
cd07254	120	cd07254, Glo_EDI_BRP_like_20, This conserved domai	5e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	6e-05
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	7e-05
cd08360	134	cd08360, MhqB_like_C, C-terminal domain of Burkhol	9e-05
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	1e-04
cd07244	121	cd07244, FosA, FosA, a Fosfomycin resistance prote	1e-04
cd07237	154	cd07237, BphC1-RGP6_C_like, C-terminal domain of 2	1e-04
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	2e-04
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	2e-04
cd08342	136	cd08342, HPPD_N_like, N-terminal domain of 4-hydro	4e-04
cd07266	121	cd07266, HPCD_N_class_II, N-terminal domain of 3,4	6e-04
TIGR03211	303	TIGR03211, catechol_2_3, catechol 2,3 dioxygenase	0.001
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	0.002
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	0.003
cd07239	144	cd07239, BphC5-RK37_C_like, C-terminal, catalytic,	0.003

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  601 bits (1551), Expect = 0.0
 Identities = 246/286 (86%), Positives = 268/286 (93%)

Query: 91  NMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR 150
             A  S     +++L+W K DKRRMLHVVYRVGDLD+TIKFYTECLGMKLLRKRDIPE++
Sbjct: 1   ASAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEK 60

Query: 151 YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTR 210
           YTNAFLGYGPEDS+FVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV+LVKAKGGKVTR
Sbjct: 61  YTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTR 120

Query: 211 EPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMEL 270
           EPGPVKGG +VIAF++DPDGYKFEL++RGPTPEPLCQVMLRVGDLDR+I FY+KAFGM+L
Sbjct: 121 EPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKL 180

Query: 271 LRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEA 330
           LRKRDNP+YKYTIA+MGYGPEDK  VLELTYN+GVTEY KGN YAQIAIGTDDVYKTAEA
Sbjct: 181 LRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEA 240

Query: 331 IKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE 376
           IKL GGKITREPGPLPGINTKITACLDPDGWK+VFVDN+DFLKELE
Sbjct: 241 IKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  252 bits (646), Expect = 2e-84
 Identities = 87/141 (61%), Positives = 107/141 (75%)

Query: 107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV 166
             K+ KRR+LH + RVGDLDK++ FYTE LGMKLLRKRD PE +++ AFLGYG E S  V
Sbjct: 10  DPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAV 69

Query: 167 VELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
           +ELT+N+G +KYD+G GFGH  I V+DV K  + V+A GG V REPGPVKGG TVIAF+E
Sbjct: 70  IELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVE 129

Query: 227 DPDGYKFELLERGPTPEPLCQ 247
           DPDGYK EL++R  T + L  
Sbjct: 130 DPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  185 bits (472), Expect = 2e-58
 Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 3/123 (2%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
            LH + RV DL+K++ FYT+ LGMKLLR++D PE ++T  FLGY  EDS  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 175 VD-KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
            +  YD G GFGH   AV+DV    + ++  G +VT+ PG        IAFI+DPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGDGGMKG--IAFIKDPDGYWI 118

Query: 234 ELL 236
           EL+
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  166 bits (423), Expect = 6e-51
 Identities = 63/124 (50%), Positives = 84/124 (67%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 304
           L   MLRVGDLD++++FY +  GM+LLRKRD P+ K+++A +GYG E   AV+ELT+N G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 305 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSV 364
             +YD GNG+  IAIG DDVYK  E ++  GG + REPGP+ G  T I    DPDG+K  
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIE 137

Query: 365 FVDN 368
            +  
Sbjct: 138 LIQR 141

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  157 bits (398), Expect = 2e-47
 Identities = 70/117 (59%), Positives = 91/117 (77%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
           RVGDL ++I FYT  LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+GVDKY++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 237
           GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK EL+E
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  136 bits (345), Expect = 1e-39
 Identities = 51/115 (44%), Positives = 70/115 (60%), Gaps = 3/115 (2%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
             MLRV DL+++++FY    GM+LLR++D P+ K+T+  +GY  ED   VLELTYN G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 307 E-YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           E YD GNG+  +A   DDVY   E ++  G ++T+ PG   G    I    DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPG--DGGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  133 bits (336), Expect = 3e-38
 Identities = 60/122 (49%), Positives = 82/122 (67%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 308
           MLRVGDL R+I+FY    GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN 368
           + G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++ 
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEE 120

Query: 369 LD 370
            D
Sbjct: 121 KD 122

Length = 129

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  113 bits (285), Expect = 6e-31
 Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ HV  RVGDL+K++ FYT+ LG KL+ + D  E    +AF          V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 174 GVDKYDIGT---GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
                  G           +V+DV    D +KA G ++ REPG    G     +  DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYS-YFRDPDG 115

Query: 231 YKFEL 235
              EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  105 bits (265), Expect = 6e-28
 Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 21/137 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI----------PED-RYTNAFLGYGPE 161
           RR LH V++VG+ +KTIKFY E LGMK+LR  +           P D +++   +GYGPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
           D HFVVELTYNYG+  Y++G  F    I  +                 +   PV      
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS----------NAKKHNWPVTEVEDG 110

Query: 222 IAFIEDPDGYKFELLER 238
           +  ++ P GYKF L+++
Sbjct: 111 VYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 94.0 bits (234), Expect = 1e-23
 Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV   V DL+  + FY + LG ++L +     +    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAEF---AFLRLG----GTRLEL-FEGDEP 52

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
               G G  H    V+DV   V+ +KA G ++   P     G  V A+  DPDG   EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGRV-AYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 90.9 bits (226), Expect = 2e-22
 Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
            V LRVGDL+++++FY    G +L+ + D+ +     A    G      VLEL  N    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFTAGG----RVLELLLNETPP 59

Query: 307 EYDKG---NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWK 362
               G   +  A IA   DDV    + +K +G +I REPG   G   + +   DPDG  
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGR-HGWGGRYSYFRDPDGNL 117

Length = 120

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 80.6 bits (199), Expect = 5e-18
 Identities = 50/152 (32%), Positives = 76/152 (50%), Gaps = 31/152 (20%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY-----GPEDS------ 163
           M   ++R+ D   ++ FY+  LGM LL++ D PE +++  FLGY      P D       
Sbjct: 28  MQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVW 87

Query: 164 ----HFVVELTYNYGVDK------YDIG----TGFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                  +ELT+N+G +       Y  G     GFGH GI V+DV K  +  +  G +  
Sbjct: 88  TFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFV 147

Query: 210 REP--GPVKGGNTVIAFIEDPDGYKFELLERG 239
           ++P  G +KG    +AFI+DPDGY  E+ +  
Sbjct: 148 KKPDDGKMKG----LAFIKDPDGYWIEIFDLK 175

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 78.9 bits (194), Expect = 5e-17
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 31/150 (20%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY-----GPED------- 162
           M   +YR+ D   ++ FY+  LGM LL++ D PE +++  F+GY      P D       
Sbjct: 76  MQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVW 135

Query: 163 ---SHFVVELTYNYGVDK------YDIGT----GFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                  +ELT+N+G +       Y  G     GFGH GI V+DV K  +  +  G +  
Sbjct: 136 TFGQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFV 195

Query: 210 REP--GPVKGGNTVIAFIEDPDGYKFELLE 237
           ++P  G +KG    IAFI+DPDGY  E+ +
Sbjct: 196 KKPNDGKMKG----IAFIKDPDGYWIEIFD 221

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 72.5 bits (177), Expect = 2e-15
 Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 19/141 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYG-----------PE 161
             + HV   V DL+ +I FYT+ LG++L++      D      L +              
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 162 DSHFVVELTYNYGV-DKYDIGT-GFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVK 216
                    +   V      G  G GH    V+D A     +  +   G ++        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 217 GGNTVIAFIEDPDGYKFELLE 237
           G   V  +  DPDG   EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 67.8 bits (166), Expect = 3e-14
 Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
            V DL+    FY E LG ++       +  Y    LG       F+  +      +    
Sbjct: 2   PVSDLEAARAFYEELLGFEVEE----EDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           G G  H    V+D+   V  +KA GG +   P     G     ++ DPDG   EL
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWGGR-EFYVRDPDGNLIEL 108

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 67.4 bits (165), Expect = 8e-14
 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 21/129 (16%)

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRD---------NPDY--KYTIAVMGYGPEDKNAVLE 298
            +VG+ ++ I FY++  GM++LR  +         N  Y  K++  ++GYGPED + V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 299 LTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDP 358
           LTYN+G+ +Y+ GN +  I I +      A+              P+  +   +     P
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNW----------PVTEVEDGVYEVKAP 117

Query: 359 DGWKSVFVD 367
            G+K   +D
Sbjct: 118 GGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 65.5 bits (160), Expect = 3e-13
 Identities = 32/114 (28%), Positives = 45/114 (39%), Gaps = 9/114 (7%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
            V L V DL+ A+ FY+   G E+L +          A +  G       LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 307 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
               G G   +A   DDV    E +K +G +I   P   P    ++    DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGG-RVAYFRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 65.0 bits (158), Expect = 4e-12
 Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 34/148 (22%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGY-----GPED--------- 292
           Q M R+ D   +++FY +  GM LL++ D P+ K+++  MGY      P D         
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 293 -KNAVLELTYNHGVTE-------YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITR 340
            + A +ELT+N G TE       Y  GN    G+  I I  DDVYK  E  +  G +  +
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVK 196

Query: 341 EP--GPLPGINTKITACLDPDG-WKSVF 365
           +P  G + G    I    DPDG W  +F
Sbjct: 197 KPNDGKMKG----IAFIKDPDGYWIEIF 220

Length = 233

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 62.9 bits (153), Expect = 9e-12
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 34/148 (22%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGY-----GPED--------- 292
           Q M R+ D   +++FY +  GM LL++ D P+ K+++  +GY      P D         
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTF 89

Query: 293 -KNAVLELTYNHGVTE-------YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITR 340
            + A +ELT+N G TE       Y  GN    G+  I I  DDVYK  E  +  G +  +
Sbjct: 90  GRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVK 148

Query: 341 EP--GPLPGINTKITACLDPDG-WKSVF 365
           +P  G + G    +    DPDG W  +F
Sbjct: 149 KPDDGKMKG----LAFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 58.2 bits (141), Expect = 8e-11
 Identities = 26/111 (23%), Positives = 40/111 (36%), Gaps = 8/111 (7%)

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYD 309
           L V DL+ A  FY++  G E+  + ++ +Y                 +EL          
Sbjct: 1   LPVSDLEAARAFYEELLGFEV--EEEDGEY---AEFRLGLVLALGGFIELI--GLPEPDA 53

Query: 310 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
            G G   +    DD+      +K +GG I   P   P    +     DPDG
Sbjct: 54  PGGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPW-GGREFYVRDPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 56.6 bits (137), Expect = 4e-10
 Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 18/116 (15%)

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKY-TIAVMGYGPEDKNAVLELTYNHGVTE- 307
           L V DL+RA  FY+K FG       D  + +Y      G G              G    
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGA------------GGGLMA 62

Query: 308 ---YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                 G G   I    DD+  T E +  +GGK+ R     PG    I   +DP+G
Sbjct: 63  RPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPEG 117

Length = 127

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 53.7 bits (130), Expect = 4e-09
 Identities = 28/120 (23%), Positives = 36/120 (30%), Gaps = 17/120 (14%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
             D ++   FY    G             Y     G G              G+ K    
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGA-----------VGGLMKAPEP 55

Query: 182 TGFGHFG----IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 237
                 G     AV+DV      V+A GGKV   P  +  G    A   DP+G  F L +
Sbjct: 56  AAGSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLWQ 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 53.7 bits (130), Expect = 5e-09
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 17/132 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLL-RKRDIPEDRYTNAFLGYGPEDSHFVVEL------ 169
           H+   V DL+  +KFY + LG+    R+    E     AFLG G  +    +EL      
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLG--NVQ--IELIEPLDD 58

Query: 170 --TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIED 227
                  ++K   G G  H    V+D+   +  +KA+G ++ +E   +  G   +AF+  
Sbjct: 59  DSPIAKFLEKR--GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHP 116

Query: 228 PDGYKF--ELLE 237
            D      EL+E
Sbjct: 117 KDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 53.6 bits (128), Expect = 7e-09
 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 19/130 (14%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH--- 303
            V L V DL+ +I+FY    G+ L++   N         + +   D      L +     
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 304 ----------GVTEYDKGNGYAQIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINT 350
                      +       G   +A   DD          +   G +I        G+  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGV-- 122

Query: 351 KITACLDPDG 360
                 DPDG
Sbjct: 123 -HVYFRDPDG 131

Length = 138

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 53.1 bits (128), Expect = 9e-09
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 15/128 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLG-MKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYG 174
           HV   V DL+++  FY   LG +     ++  + R +     G      + V++      
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGT-----YLVLQQADGES 58

Query: 175 VDKYDI-GTGFGHFGIAVEDVAKTVD----LVKAKGGKVTREPGPVK--GGNTVIAFIED 227
             ++D    G  H           VD     +  +G ++   P      G      F ED
Sbjct: 59  AGRHDRRNPGLHHLAFRAPSREA-VDELYARLAKRGAEILYAPREPYAGGPGYYALFFED 117

Query: 228 PDGYKFEL 235
           PDG + EL
Sbjct: 118 PDGIRLEL 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 11/128 (8%)

Query: 113 RRMLHVVY---RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
                +V+    V DL++   FY +  G       D+ E RY   F   G      ++  
Sbjct: 5   GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYA-VFPADGAGAGGGLMA- 62

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                      G G      AV+D+  T++ V A GGKV R      GG   IA   DP+
Sbjct: 63  -----RPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKVLRPKTEFPGGGR-IAHFVDPE 116

Query: 230 GYKFELLE 237
           G +F L  
Sbjct: 117 GNRFGLWS 124

Length = 127

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 3/110 (2%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DLD    F+ + LG+               AF   G +     VEL      +
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 177 KYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
            +    G G  H    V+D+   V  ++A+G +V  +          +AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYNYGV 175
           HV  RV DL+ +  FYT+ LG++   +   P   +  A+L  G     H + E       
Sbjct: 3   HVALRVPDLEASRAFYTDVLGLEEGPR---PPFLFPGAWLYAGDGPQLHLIEE----DPP 55

Query: 176 DKYDIGTG-FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA-FIEDPDGYKF 233
           D    G G   H    V+D+      +KA G   T    P  G   V   F+ DPDG + 
Sbjct: 56  DALPEGPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPGDG---VRQLFVRDPDGNRI 112

Query: 234 EL 235
           EL
Sbjct: 113 EL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 45/173 (26%), Positives = 60/173 (34%), Gaps = 36/173 (20%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTYN 172
           R  HV  RV DLDK+ +FY + LG +               +L G      H +V     
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKAP 57

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                        + G  V   ED+ K  D  +  G  V        GG      +EDP 
Sbjct: 58  S--------AALSYIGFRVSKEEDLDKAADFFQKLGHPVRLVR---DGGQPEALRVEDPF 106

Query: 230 GYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           GY  E                  RG +P  L    + V D+ RA+ FYK+  G
Sbjct: 107 GYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELG 159

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 19/130 (14%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED-------SHFVVEL 169
           HV     D  +T+ FYT+ LG++L++K    +D  T   L +G          + F    
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTY-HLFFGDGLGSPGTLLTFFEWPD 62

Query: 170 TYNYGVDKYDIGTG-FGHFGIAVEDVAKTVDLVK---AKGGKVTREPGPVKGGNTVIAFI 225
               G      G G   H   +V   A      +   A G  V+      + G   + F 
Sbjct: 63  AGPKG----RRGPGQIHHIAFSVPSEASLEAWRERLRAAGVPVSGV--VDRFGERSLYF- 115

Query: 226 EDPDGYKFEL 235
           EDPDG + EL
Sbjct: 116 EDPDGIRLEL 125

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 51.0 bits (123), Expect = 4e-08
 Identities = 34/127 (26%), Positives = 44/127 (34%), Gaps = 18/127 (14%)

Query: 117 HVVYRVGDLDKTIKFYTEC---LGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           HV   V DL++   FY      LG+K +              +GYG         +T  +
Sbjct: 3   HVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTKPF 55

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVD----LVKAKGGKVTREPG--PVKGGNTVIAFIED 227
             +    G G  H   A       VD       A GG     PG  P  G     A++ D
Sbjct: 56  DGEPATAGNGT-HVAFAAPSRE-AVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRD 113

Query: 228 PDGYKFE 234
           PDG K E
Sbjct: 114 PDGNKIE 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 32/129 (24%), Positives = 48/129 (37%), Gaps = 22/129 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +  V   V DL     FY E  G+ ++       +     +L       H ++ L  +
Sbjct: 2   TALRGVGLGVPDLAAAAAFYREVWGLSVV------AEDDGIVYLR-ATGSEHHILRLRRS 54

Query: 173 YGVDKYDIGTGFGHFGIA----VEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIE 226
              D+  +      F +A    V+ +A+ V    A+GG V  EPG     GG     F  
Sbjct: 55  ---DRNRLDV--VSFSVASRADVDALARQVA---ARGGTVLSEPGATDDPGGGYGFRFF- 105

Query: 227 DPDGYKFEL 235
           DPDG   E 
Sbjct: 106 DPDGRLIEF 114

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYD 309
           L   D +RA  FY   FG        +    Y +   G G      +++           
Sbjct: 6   LPTTDPERAKAFYGAVFGWTF-EDMGDGGGDYAVFSTGGGA--VGGLMKAP-----EPAA 57

Query: 310 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                  +    DDV   A  ++ +GGK+   P  +PG+  +     DP+G
Sbjct: 58  GSPPGWLVYFAVDDVDAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEG 107

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|233334 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 55/265 (20%), Positives = 92/265 (34%), Gaps = 55/265 (20%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV--ELTYNYG 174
            V + VGD  +   +Y    G + + K     ++ ++          +FV+    + +  
Sbjct: 5   FVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREKASHV---LRQGQINFVLTAPYSSDSP 61

Query: 175 VDKYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE------ 226
              +    G G       V+D A   +    +G +  + P  +  G   +A I+      
Sbjct: 62  AADFAAKHGDGVKDVAFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVV 121

Query: 227 ----DPDGYK-------FELLERGPTPEPLCQVMLRV----------GDLDRAINFYKKA 265
               D  GYK       FE L      EP   V L            G ++    FY+K 
Sbjct: 122 HTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGLIAIDHLVGNVYRGQMEPWAEFYEKI 181

Query: 266 FGMELLRKRD--------------NPDYKYTIAVM-GYGPEDKNAVLELTYNHGVTEYDK 310
           FG   +R  D              +PD K  I +      +DK+ + E    +       
Sbjct: 182 FGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFYN------ 235

Query: 311 GNGYAQIAIGTDDVYKTAEAIKLSG 335
           G G   IA+ TDD+ +T  A++  G
Sbjct: 236 GAGVQHIALNTDDIVRTVRALRARG 260

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PMID:8000039). In some bacterial species, this enzyme has been studied as a hemolysin [Energy metabolism, Amino acids and amines]. Length = 353

>gnl|CDD|176688 cd07267, THT_Oxygenase_N, N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 25/128 (19%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTY 171
             + HV +   DLDK  +F T+  G+++  + D         +  GYG +   FV     
Sbjct: 2   TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTD--PFV----- 47

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAK---GGKVTREPGPVKGGNTVIAFIEDP 228
            Y   K +    F          A   DL KA    G  V  +     GG  V   + DP
Sbjct: 48  -YVARKGE-KARFVGAAFEAASRA---DLEKAAALPGASVIDDLEAPGGGKRVT--LTDP 100

Query: 229 DGYKFELL 236
           DG+  EL+
Sbjct: 101 DGFPVELV 108

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity. Length = 113

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 12/139 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HVV  V DL+  ++FY + LG  +      P       FL   P++ H +  +T      
Sbjct: 4   HVVLYVRDLEAMVRFYRDVLGFTV--TDRGPLGGL--VFLSRDPDEHHQIALITGRPAAP 59

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLV---KAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                 G  H    V+ +    DL    +A G        PV  GN    +  DPDG + 
Sbjct: 60  PPG-PAGLNHIAFEVDSLDDLRDLYERLRAAGIT---PVWPVDHGNAWSIYFRDPDGNRL 115

Query: 234 EL-LERGPTPEPLCQVMLR 251
           EL ++           ML 
Sbjct: 116 ELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 44.8 bits (107), Expect = 5e-06
 Identities = 32/124 (25%), Positives = 42/124 (33%), Gaps = 18/124 (14%)

Query: 248 VMLRVGDLDRAINFYKKAFG-MELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
           V L V DL+RA  FY      + + R  ++         +GYG         +T      
Sbjct: 4   VTLGVNDLERARAFYDAVLAPLGIKRVMEDGP-----GAVGYGKGGGGPDFWVTKPFDGE 58

Query: 307 EYDKGNGYAQIAI------GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDP 358
               GNG   +A         D  +  A A+   GG     PG  P       A    DP
Sbjct: 59  PATAGNG-THVAFAAPSREAVDAFH--AAALAA-GGTDEGAPGLRPHYGPGYYAAYVRDP 114

Query: 359 DGWK 362
           DG K
Sbjct: 115 DGNK 118

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 44.2 bits (105), Expect = 9e-06
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 6/129 (4%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ HV   V DL++  KFY + LG ++    ++PE      F+  G      +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 174 GVDKY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGK-VTREPGPVKGGNTVIAFI--EDP 228
            + K+    G G  H  I V+D+   ++ +K KG + +  EP     G  V AF+  +  
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPV-AFLHPKST 119

Query: 229 DGYKFELLE 237
            G   EL +
Sbjct: 120 GGVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 20/126 (15%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
           V DL+    FY + LG++L+ K D    R   AF   G       + L ++ G      G
Sbjct: 8   VDDLEAAEAFYEDVLGLELMLKED---RR--LAFFWVGGRG----MLLLFDPGATSTPGG 58

Query: 182 T-------GFGHFGIAV--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                   G GHF  A+  E++A+    ++AKG  +  E    +GG ++  +  DPDG  
Sbjct: 59  EIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWPRGGRSL--YFRDPDGNL 116

Query: 233 FELLER 238
            EL   
Sbjct: 117 LELATP 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 43.3 bits (103), Expect = 2e-05
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 26/126 (20%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY--D 179
           V DL ++  FY    G K         D    AF   G      V+ L   +  ++   D
Sbjct: 6   VADLARSRAFYRA-GGWK---TSADSNDGV--AFFQLG----GLVLAL---FPREELAKD 52

Query: 180 IG-----TGFGHFGIA-----VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
            G      GF    +A      ++V   +    A G  + + P  V  G     +  DPD
Sbjct: 53  AGVPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGG-YSGYFADPD 111

Query: 230 GYKFEL 235
           G+ +E+
Sbjct: 112 GHLWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           V  V D++K++ FY + LG ++  +   PE  Y  A +      +   +           
Sbjct: 3   VLPVSDIEKSLAFYRDVLGFEVDFEH--PEPLY--AQVSRD--GAQLHLSEHDGDEWVPL 56

Query: 179 DIGTGFGHFGIAVEDVAKTVDLVKAKG-GKVTREPGPVKGGNTVIAFIEDPDGY 231
             G     + I V+DV      +KAKG   +   P     G    A ++DPDG 
Sbjct: 57  GRGGNV--Y-IEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFA-VQDPDGN 106

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 11/119 (9%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRD-NPDYK-YTIAVMGYGPEDKNAVLELTYNHG 304
            V L V D D+A+ FY +  G E+         ++  T+A     P      L L     
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAP----PGSPETSLVLAPPAN 56

Query: 305 VTEYDKGN---GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                 G    G   + + TDD+  T E +K  G + T EP  +P     +    DPDG
Sbjct: 57  PAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYG--TVAVFRDPDG 113

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 41/141 (29%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            V   V D DK + FYTE LG ++  + D+P                   V +       
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVP------------MGGGFRWVTVA-----P 41

Query: 177 KYDIGTGF------------------GHFGI--AVEDVAKTVDLVKAKGGKVTREPGPVK 216
                T                    G  G+    +D+  T + +KA+G + T EP  + 
Sbjct: 42  PGSPETSLVLAPPANPAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMP 101

Query: 217 GGNTVIAFIEDPDGYKFELLE 237
            G   +A   DPDG  F L++
Sbjct: 102 YG--TVAVFRDPDGNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.6 bits (101), Expect = 3e-05
 Identities = 14/33 (42%), Positives = 23/33 (69%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRD 145
           +R+ HVV  V D++ T+ FYT  LGM+++R  +
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 42.2 bits (99), Expect = 4e-05
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRY---TNAFLGYGPEDSHFVVELTYNY 173
           H+   V DL+K+I FY + LG +L+      ++ Y      ++    EDS    E TY +
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYTH 58

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                        F I  E+  +  + +KA G ++  E   V+G    I F  DPDG+  
Sbjct: 59  IA-----------FQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGHLL 106

Query: 234 EL 235
           EL
Sbjct: 107 EL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|176677 cd07254, Glo_EDI_BRP_like_20, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 26/128 (20%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS--HFVVELTYNY 173
            HV   V DL+ +I FY++  G++  + R    D Y      +  ED   +FV+      
Sbjct: 3   FHVALNVDDLEASIAFYSKLFGVEPTKVR----DDYAK----FLLEDPRLNFVLN----- 49

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF-------IE 226
                  G G  H G+ V+      ++ +AK           K  +T   +       + 
Sbjct: 50  -ERPGAPGGGLNHLGVQVDSAE---EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVT 105

Query: 227 DPDGYKFE 234
           DPDG  +E
Sbjct: 106 DPDGNAWE 113

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 120

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 6e-05
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+  V  RV DL++++ FY + LG+++L + D      + A LG G +    V+E   + 
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 174 GVDKYDIGTGFGHFGIAVEDVA 195
                   TG  HF I +   A
Sbjct: 56  PPAPPG-TTGLYHFAILLPSRA 76

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 13/30 (43%), Positives = 21/30 (70%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDN 276
            V LRV DL+R++ FY+   G+E+L + D+
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLERTDS 34

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176708 cd08360, MhqB_like_C, C-terminal domain of Burkholderia sp

 Score = 41.5 bits (98), Expect = 9e-05
 Identities = 31/131 (23%), Positives = 46/131 (35%), Gaps = 23/131 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN--AFLGYGPEDSHFVVELT 170
           RR+ HVV  V D++    FY + LG +         DR+    AFL       H  + L 
Sbjct: 2   RRLGHVVLFVPDVEAAEAFYRDRLGFR-------VSDRFKGRGAFLRAAGGGDHHNLFL- 53

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDV------AKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
               +       GF H    V D+         +      G +    PG  + G+    +
Sbjct: 54  ----IKTPAPMAGFHHAAFEVGDIDEVMLGGNHML---RAGYQTGWGPGRHRIGSNYFWY 106

Query: 225 IEDPDGYKFEL 235
             DP G + E 
Sbjct: 107 FRDPWGGEVEY 117

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Length = 134

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 29/139 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE-DSH-FVVELT 170
           + + HV     D  ++ +FY E LG+ L+R+              Y PE  S+   + L 
Sbjct: 2   KGIHHVAIICSDYARSKEFYVEVLGLTLIRET-------------YRPERKSYKLDLALN 48

Query: 171 YNYGVD-----------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-G 218
             Y ++            Y    G  H   AVED+   V  +KA G +V  EP  V    
Sbjct: 49  GEYQIELFSFPNPPPRPSYPEACGLRHLAFAVEDIEAAVAELKAHGVEV--EPIRVDEFT 106

Query: 219 NTVIAFIEDPDGYKFELLE 237
                F  DPDG   EL E
Sbjct: 107 GKRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176668 cd07244, FosA, FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 19/121 (15%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DL++++ FY + LG KL  + D        A+L  G  D    + +  N G  
Sbjct: 4   HITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAG--DLWLCLSVDANVGPA 55

Query: 177 KYDIGTGFGH--FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
           K      + H  F ++ ED A   + ++  G K  +E      G++   +  DPDG+K E
Sbjct: 56  K-----DYTHYAFSVSEEDFASLKEKLRQAGVKEWKE--NTSEGDSF--YFLDPDGHKLE 106

Query: 235 L 235
           L
Sbjct: 107 L 107

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 121

>gnl|CDD|176661 cd07237, BphC1-RGP6_C_like, C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 23/105 (21%), Positives = 33/105 (31%), Gaps = 18/105 (17%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN---- 172
           HVV    D D+   FY + LG +L        D               F   L  N    
Sbjct: 12  HVVLATPDPDEAHAFYRDVLGFRL-------SDEIDIPLPPGPTARVTF---LHCNGRHH 61

Query: 173 -YGVDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPG 213
              + +        H  + V    DV +  D V+A+G  +    G
Sbjct: 62  SLALAEGPGPKRIHHLMLEVTSLDDVGRAYDRVRARGIPIAMTLG 106

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in this subfamily. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, they belong to a different subfamily of the ED_TypeI_classII_C (C-terminal domain of type I, class II extradiol dioxygenases) family. Length = 154

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 14/127 (11%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ H    V D+ + ++FY E LG ++    +  E     A+L       H   ++    
Sbjct: 136 RLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG-GVH---DIALTN 191

Query: 174 GVDKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGG--NTVIAFIEDP 228
           G      G    H    V D     K  D++ + G   + E GP + G  N    ++ DP
Sbjct: 192 GN-----GPRLHHIAYWVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDP 246

Query: 229 DGYKFEL 235
           DG++ EL
Sbjct: 247 DGHRIEL 253

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 16/124 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HVV R  D+  T  FYT+ LG ++  +   P      A+L    ++ H +        + 
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFRVSDRVGDPGVLAA-AWL-RCDDEHHDL-------ALF 52

Query: 177 KYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGY 231
               G G  H    VE   D+ +  D + A G  +  E GP +   GN +  +  DPDG 
Sbjct: 53  PGPEGPGLHHVAFEVESLDDIKRAGDRLAANG--IQIEWGPGRHGPGNNLFLYFRDPDGN 110

Query: 232 KFEL 235
           + EL
Sbjct: 111 RIEL 114

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|176690 cd08342, HPPD_N_like, N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 9/127 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV--ELTYNYG 174
           HV + VG+  +   +++  LG + +      ED+ +         D +FV+   L     
Sbjct: 3   HVEFYVGNAKQLASWFSTKLGFEPVAYH-GSEDKASYL---LRQGDINFVLNSPLNSFAP 58

Query: 175 VDKYDI--GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           V  +    G G       V+D A   +   A+G K  +EP   + G   IA I+      
Sbjct: 59  VADFLEKHGDGVCDVAFRVDDAAAAYERAVARGAKPVQEP-VEEPGELKIAAIKGYGDSL 117

Query: 233 FELLERG 239
             L++R 
Sbjct: 118 HTLVDRK 124

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, substrates, do not use alpha-ketoglutarate, and incorporate both atoms of dioxygen into the aromatic product. Both HPPD and HmaS exhibit duplicate beta barrel topology in their N- and C-terminal domains which share sequence similarity, suggestive of a gene duplication. Each protein has only one catalytic site located in at the C-terminal domain. This HPPD_N_like domain represents the N-terminal domain. Length = 136

>gnl|CDD|211354 cd07266, HPCD_N_class_II, N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 35/128 (27%), Positives = 51/128 (39%), Gaps = 22/128 (17%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS-HFVVELTYN 172
           R+ HV  RV DLD++ +FY + LG+       +  +    A    G E+  H  + LT  
Sbjct: 4   RLGHVELRVTDLDRSREFYVDLLGL-------VVTEEDDGAIYLRGLEEFIHHSLVLT-- 54

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR-EPGPVKG-GNTVIAFIED 227
               K       GH G  V   ED+ K     +  G      E G   G G  +   ++D
Sbjct: 55  ----KAP-EPAVGHLGFRVRSEEDLDKAEAFFQELGLPTRWVEAGEEPGQGRALR--VQD 107

Query: 228 PDGYKFEL 235
           P G+  E 
Sbjct: 108 PLGFPLEF 115

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a different superfamily. Length = 121

>gnl|CDD|234146 TIGR03211, catechol_2_3, catechol 2,3 dioxygenase

 Score = 40.3 bits (95), Expect = 0.001
 Identities = 51/218 (23%), Positives = 78/218 (35%), Gaps = 55/218 (25%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYN 172
           R+ HV  RV DL++++K YT+ LG++    RD    R Y  A+  +     H+ V LT  
Sbjct: 4   RLGHVELRVLDLEESLKHYTDVLGLEET-GRD--GQRVYLKAWDEWD----HYSVILTEA 56

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
              D      G  H    V    D+ + V  ++A G      P G + G    + F   P
Sbjct: 57  ---DT----AGLDHMAFKVESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRF-TLP 108

Query: 229 DGYKFELL---ERGPT------PEP------------LCQVMLRVGDLDRAINFYKKAFG 267
            G+  EL    E          P+P            L   +L   D+     F+ +  G
Sbjct: 109 SGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDHCLLYGEDVAENTRFFTEVLG 168

Query: 268 MELLRK-RDNPDYK------------YTIAVMGYGPED 292
             L  +       +            + IA +G  PE 
Sbjct: 169 FRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVG-DPEP 205

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase [Energy metabolism, Other]. Length = 303

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 37.5 bits (88), Expect = 0.002
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 12/115 (10%)

Query: 252 VGDLDRAINFYKKAFGMELL-RKRDNPDYKYTIAVMGYGPEDKNAVLEL----TYNHGVT 306
           V DL+ A+ FY+   G+    R+    +    +A +G G    N  +EL      +  + 
Sbjct: 8   VPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLG----NVQIELIEPLDDDSPIA 63

Query: 307 EY--DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 359
           ++   +G G   IA   DD+      +K  G ++  + GP  G   K  A L P 
Sbjct: 64  KFLEKRGEGLHHIAFEVDDIDAALARLKAQGVRLL-QEGPRIGAGGKRVAFLHPK 117

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPD 278
           V+L V D++  ++FY +  GME++R  +   
Sbjct: 7   VVLTVADIEATLDFYTRVLGMEVVRFGEEVG 37

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|176663 cd07239, BphC5-RK37_C_like, C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

 Score = 37.4 bits (87), Expect = 0.003
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 17/125 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            ++ HVV    D+DKT+ FY + LG ++    D   D+   AFL     D H +      
Sbjct: 3   VKISHVVLNSPDVDKTVAFYEDVLGFRV---SDWLGDQM--AFLRCN-SDHHSIAIARGP 56

Query: 173 YGVDKYDIGTGFGHFGI---AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +            H      ++++V + +  +  KG  +   PG    G+   A+  DP 
Sbjct: 57  H--------PSLNHVAFEMPSIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPG 108

Query: 230 GYKFE 234
           G+  E
Sbjct: 109 GFVIE 113

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 144

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	376
PLN02300	286	lactoylglutathione lyase	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	100.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.98
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.97
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.87
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.84
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.83
PLN02367	233	lactoylglutathione lyase	99.8
PLN02367	233	lactoylglutathione lyase	99.8
PRK10291	129	glyoxalase I; Provisional	99.8
PRK10291	129	glyoxalase I; Provisional	99.78
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.78
PLN03042	185	Lactoylglutathione lyase; Provisional	99.77
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.76
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.76
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.76
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.75
PLN03042	185	Lactoylglutathione lyase; Provisional	99.74
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.74
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.74
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.74
PRK11478	129	putative lyase; Provisional	99.73
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.73
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.73
PLN02300	286	lactoylglutathione lyase	99.73
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.72
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.72
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.72
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.72
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.72
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.71
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.71
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.71
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.71
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.7
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.7
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.69
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.69
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.69
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.69
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.68
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.68
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.68
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.68
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.67
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.67
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.67
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.67
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.67
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.67
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.67
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.66
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.66
PRK11478	129	putative lyase; Provisional	99.66
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.66
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.66
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.66
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.65
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.65
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.65
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.65
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.64
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.64
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.64
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.64
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.63
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.63
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.63
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.63
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.63
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.63
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.62
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.62
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.62
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.62
PRK06724	128	hypothetical protein; Provisional	99.62
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.61
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.6
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.6
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.6
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.6
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.58
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.58
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.58
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.57
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.57
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.57
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.57
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.57
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.56
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.56
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.56
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.56
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.56
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.55
PRK06724	128	hypothetical protein; Provisional	99.55
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.55
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.55
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.55
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.55
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.54
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.54
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.54
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.53
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.53
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.53
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.53
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.53
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.52
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.52
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.51
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.51
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.51
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.5
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.5
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.5
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.5
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.5
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.49
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.49
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.49
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.49
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.48
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.48
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.48
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.47
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.47
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.47
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.47
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.46
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.46
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.45
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.45
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.45
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.44
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.43
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.43
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.43
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.43
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.43
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.42
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.42
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.42
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.41
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.41
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.41
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.41
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.41
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.41
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.41
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.4
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.37
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.36
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.34
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.31
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.31
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.3
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.16
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.08
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.05
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	98.9
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.9
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.87
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.87
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	98.83
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.83
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	98.82
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.82
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	98.77
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.7
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.65
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.63
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.63
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.47
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.27
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.15
PRK10148	147	hypothetical protein; Provisional	98.07
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	97.97
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.95
PRK10148	147	hypothetical protein; Provisional	97.8
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	97.71
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.39
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	97.38
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.2
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.54
PF15067	236	FAM124: FAM124 family	94.9
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	94.38
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	94.29
PF15067	236	FAM124: FAM124 family	93.07

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=5.7e-44  Score=334.16  Aligned_cols=281  Identities=87%  Similarity=1.448  Sum_probs=236.0

Q ss_pred             ccccCcccccccccccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC
Q 017144           96 SNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV  175 (376)
Q Consensus        96 ~~~~~p~~~~~~~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~  175 (376)
                      +..+..+.+.+|.++.+.+|.||.|.|+|++++++||+++|||++..+...++..+..+|+.+++...++.+++....+.
T Consensus         6 ~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~   85 (286)
T PLN02300          6 STAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGV   85 (286)
T ss_pred             ccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCC
Confidence            33445667899998999999999999999999999999999999987665555556677887766555677888765444


Q ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCCccccccccCCh
Q 017144          176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDL  255 (376)
Q Consensus       176 ~~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~v~L~v~D~  255 (376)
                      ..+..+.|+.|++|.|+|+++++++++++|+++...|...++++.+.+||+||||+.|||++..+.+.++.|+.|.|+|+
T Consensus        86 ~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~~d~  165 (286)
T PLN02300         86 DKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDL  165 (286)
T ss_pred             CccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEeCCH
Confidence            44445678999999999999999999999999988887776656678899999999999999999999999999999999


Q ss_pred             hHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHHHHHHHHcC
Q 017144          256 DRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSG  335 (376)
Q Consensus       256 ~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G  335 (376)
                      +++.+||+++|||++......++.++.+.++..++......+++..+.+...+..+++.+|++|.|+|+++++++++++|
T Consensus       166 ~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~~~~G  245 (286)
T PLN02300        166 DRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVG  245 (286)
T ss_pred             HHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHHHHcC
Confidence            99999999999999986555555567777776544334556777665554445668899999999999999999999999


Q ss_pred             CeeecCCccCCCCCceEEEEECCCCCeEEEEeccccccccC
Q 017144          336 GKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKELE  376 (376)
Q Consensus       336 ~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  376 (376)
                      ++++.+|...|+.+.+.++|+||||+.++|+++++|+||||
T Consensus       246 ~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~~  286 (286)
T PLN02300        246 GKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE  286 (286)
T ss_pred             CeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhcC
Confidence            99999988888655588999999999999999999999997

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.3e-36  Score=260.52  Aligned_cols=258  Identities=52%  Similarity=0.878  Sum_probs=226.2

Q ss_pred             ccccccccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC-----------CceEEEEEeeCCCCceEEEEEEec
Q 017144          104 VLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYN  172 (376)
Q Consensus       104 ~~~~~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~l~l~~~  172 (376)
                      ++.|.+.+..++-|+++.|.|.+++++||+++|||++....++++           ++|...++++|++..|++++|..+
T Consensus         7 ~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYN   86 (299)
T KOG2943|consen    7 LLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYN   86 (299)
T ss_pred             hhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEec
Confidence            678889999999999999999999999999999999999888887           678899999999999999999999


Q ss_pred             CCCCCCCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCCcccccccc
Q 017144          173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRV  252 (376)
Q Consensus       173 ~~~~~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~v~L~v  252 (376)
                      .+...|..|.++.||.+.++|+-...+.+...|.+         +++...+++.||||+.|+|++..+.+.++.+|+|+|
T Consensus        87 YgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~V  157 (299)
T KOG2943|consen   87 YGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGK---------GSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNV  157 (299)
T ss_pred             cCccceeccCCcccEEEeHHHHHHHHHHhcCcCCc---------ccceEEEEEECCCCcEEEEeccCCCCCCeEEEEEEe
Confidence            99999999999999999999988777777665542         234557789999999999999999999999999999


Q ss_pred             CChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHHHHHHH
Q 017144          253 GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIK  332 (376)
Q Consensus       253 ~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~~~l~  332 (376)
                      +|+++++.||+++|||++.+.    +.++..++++++++  ++.+||+++++......|.+...+++..+|+..+.+.++
T Consensus       158 gdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~iK  231 (299)
T KOG2943|consen  158 GDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAIK  231 (299)
T ss_pred             hhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHHHH
Confidence            999999999999999999865    33467788898876  599999999998888888888888888899999999999


Q ss_pred             HcCCeeecCCccC--CCC-CceEEEEECCCCCeEEEEeccccccccC
Q 017144          333 LSGGKITREPGPL--PGI-NTKITACLDPDGWKSVFVDNLDFLKELE  376 (376)
Q Consensus       333 ~~G~~~~~~p~~~--~~~-~~~~~~~~DPdG~~iel~~~~~~~~~~~  376 (376)
                      ..+.++..+..+.  |++ ...++.+.||||+.|+||.+++|+++++
T Consensus       232 ~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk  278 (299)
T KOG2943|consen  232 SANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSK  278 (299)
T ss_pred             HhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhc
Confidence            9987766554432  443 3478899999999999999999999864

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=100.00  E-value=2.7e-30  Score=242.89  Aligned_cols=234  Identities=26%  Similarity=0.311  Sum_probs=171.5

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      +.+|+||.|.|+|++++++||+++|||++..+.+      ..+|+.......++.+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~v   68 (294)
T TIGR02295         2 ILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFRV   68 (294)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC-------CCcCccEEEEEe
Confidence            5689999999999999999999999999876542      234554322222334444332       235788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC---------------CCCCccccccccC
Q 017144          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------TPEPLCQVMLRVG  253 (376)
Q Consensus       192 ~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~---------------~~~~~~~v~L~v~  253 (376)
                      +   |+++++++|+++|+++...+..   +..+.+||+|||||.|||+....               .+.+++|+.|.|.
T Consensus        69 ~~~~dl~~~~~~l~~~Gv~v~~~~~~---~~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v~  145 (294)
T TIGR02295        69 SKEEDLDKAADFFQKLGHPVRLVRDG---GQPEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVP  145 (294)
T ss_pred             CCHHHHHHHHHHHHhcCCcEEeecCC---CCceEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEeC
Confidence            7   6888999999999998765432   24589999999999999986331               1235899999999


Q ss_pred             ChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC---HHHHHHH
Q 017144          254 DLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD---VYKTAEA  330 (376)
Q Consensus       254 D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D---l~~~~~~  330 (376)
                      |++++.+||+++|||++......+.+.....++..+.  .++.+.+..       ..+++++|++|.|+|   +++++++
T Consensus       146 dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~Hiaf~v~d~~~v~~~~~~  216 (294)
T TIGR02295       146 DVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG--GVHDIALTN-------GNGPRLHHIAYWVHDPLNIIKACDI  216 (294)
T ss_pred             CHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCC--CcCceEeec-------CCCCceeeEEEEcCCHHHHHHHHHH
Confidence            9999999999999999876544333333344444221  122333321       134689999999998   5567899


Q ss_pred             HHHcCCe--eecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          331 IKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       331 l~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      |+++|++  +..+|+++..+..+++|++||+|+.|||+....
T Consensus       217 l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~~  258 (294)
T TIGR02295       217 LASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGDY  258 (294)
T ss_pred             HHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEeccc
Confidence            9999998  667777666544578999999999999987654

The enzyme from Bacillus brevis contains manganese.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.98  E-value=2.1e-30  Score=244.68  Aligned_cols=234  Identities=23%  Similarity=0.256  Sum_probs=169.5

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      .++|+|+.|.|+|++++++||+++|||++..+.+      ..+++.......++.+.+.+.       ...|+.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDG------QRVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecC------ceEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            4589999999999999999999999999876543      134454422212344444332       235789999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC---------------------CCCccc
Q 017144          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------------PEPLCQ  247 (376)
Q Consensus       192 ~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~---------------------~~~~~~  247 (376)
                      +   |+++++++|+++|+++...|.....+.++.+||+||||+.|||++....                     ..+++|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            8   6889999999999998765542222345789999999999999974421                     134889


Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCe-EEEEeecCCCCCceEEEEcccCCCccccCCCc-eeEEEEEeCC--
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKY-TIAVMGYGPEDKNAVLELTYNHGVTEYDKGNG-YAQIAIGTDD--  323 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g-~~hiaf~V~D--  323 (376)
                      +.|.|+|++++.+||+++|||++......+++.. ...++..+.  ....+.+..       ..+.+ ++|++|.|+|  
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~g~~~Hiaf~v~~~~  219 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSN--KAHDIAFVG-------DPEPGKLHHVSFFLDSWE  219 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCC--CCcccceec-------CCCCCceEEEEEEcCCHH
Confidence            9999999999999999999999876543333332 233444322  122222211       11234 8999999986  


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          324 -VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       324 -l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                       +++++++|+++|+++.++|.+++....+++||+||+||.|||..
T Consensus       220 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       220 DVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             HHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence             55688899999999988887776444579999999999999973

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.97  E-value=1.1e-29  Score=237.86  Aligned_cols=233  Identities=18%  Similarity=0.225  Sum_probs=171.2

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      .+|+||+|.|+|++++++||+++|||++..+.+     ....|+.++..  ++.+.+....       ..++.|++|.|+
T Consensus         2 ~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~-----~~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~V~   67 (286)
T TIGR03213         2 RGLGYLGIGVSDVDAWREFATEVLGMMVASEGE-----NDALYLRLDSR--AHRIAVHPGE-------SDDLAYAGWEVA   67 (286)
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhccCcccccCCC-----CceEEEEcCCC--ceEEEEEECC-------cCCeeeEeeeeC
Confidence            489999999999999999999999998764321     12446666543  3444454421       246789999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEEcCCCCEEEEeecCCC------------------CCCccccc
Q 017144          193 D---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQVM  249 (376)
Q Consensus       193 d---~d~~~~rl~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~~------------------~~~~~~v~  249 (376)
                      |   ++++.++|+++|+++...|...  ..+....++|.|||||.+|++.....                  +.+++|+.
T Consensus        68 ~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~  147 (286)
T TIGR03213        68 DEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHIV  147 (286)
T ss_pred             CHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEEE
Confidence            8   8889999999999987655321  12356789999999999999963211                  12689999


Q ss_pred             cccCChhHHHHHHHHhhCCEEeceecC--CCC-CeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHH
Q 017144          250 LRVGDLDRAINFYKKAFGMELLRKRDN--PDY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK  326 (376)
Q Consensus       250 L~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~-~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~  326 (376)
                      |.|+|++++.+||+++|||++......  +++ .+...++..++.  ++.+.+..      .....+++|++|+|+|+++
T Consensus       148 l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~------~~~~~~~~Hiaf~v~d~~~  219 (286)
T TIGR03213       148 LRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAA------GPSEKRLNHLMLEVDTLDD  219 (286)
T ss_pred             EEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEec------CCCCCceEEEEEEcCCHHH
Confidence            999999999999999999998765422  211 123455654322  33333322      1134679999999987666


Q ss_pred             ---HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          327 ---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       327 ---~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                         +.++|+++|+ ....|++++.+..+++|++||+|++|||...
T Consensus       220 v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       220 VGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             HHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence               8999999999 6667777766567899999999999999763

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.87  E-value=4.7e-20  Score=177.45  Aligned_cols=221  Identities=22%  Similarity=0.368  Sum_probs=150.0

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC----C--CCCCCceEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----Y--DIGTGFGHF  187 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~----~--~~~~g~~hi  187 (376)
                      +++||.+.|+|++++.+||++.|||++.......... ..+.++.|    ...+++........    +  .+++|+.|+
T Consensus         2 ~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G----~~~l~L~~~~~~~s~~~~~~~~hg~gv~~i   76 (353)
T TIGR01263         2 GFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQG----QINFVLTAPYSSDSPAADFAAKHGDGVKDV   76 (353)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeC----CEEEEEecCCCCCchHHHHHHhCCCceEEE
Confidence            6899999999999999999999999998763222221 22233433    34566655332211    1  257899999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC---------------------C----C
Q 017144          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---------------------T----P  242 (376)
Q Consensus       188 ~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~---------------------~----~  242 (376)
                      +|.|+|++++++++.++|+++..+|.....+.....-+..++|..+.|+++..                     .    -
T Consensus        77 af~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (353)
T TIGR01263        77 AFRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGL  156 (353)
T ss_pred             EEEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCCe
Confidence            99999999999999999999987765531011222223344444444443210                     0    1


Q ss_pred             CCccccccccC--ChhHHHHHHHHhhCCEEeceecCCC--CCe-EEEEeecCCCCCceEEEEcccCC---Cc------cc
Q 017144          243 EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPD--YKY-TIAVMGYGPEDKNAVLELTYNHG---VT------EY  308 (376)
Q Consensus       243 ~~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~~~~--~~~-~~~~l~~~~~~~~~~l~l~~~~~---~~------~~  308 (376)
                      ..++|+++.|.  |++++++||+++|||++....+...  ... ..++..   ..+...++|..+..   ..      ..
T Consensus       157 ~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~---~~g~~~i~L~ep~~~~~~s~i~~fl~~  233 (353)
T TIGR01263       157 IAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMAS---PDGKVKIPLNEPASGKDKSQIEEFLEF  233 (353)
T ss_pred             EEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEEC---CCCcEEEEEeccCCCCCCCHHHHHHHH
Confidence            24899999999  9999999999999999876543221  112 222222   12346677766321   11      12


Q ss_pred             cCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 017144          309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  342 (376)
Q Consensus       309 ~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p  342 (376)
                      ..|+|++||||.|+|+++++++|+++|++++..|
T Consensus       234 ~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       234 YNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             cCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            3589999999999999999999999999999876

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.84  E-value=4.9e-19  Score=157.14  Aligned_cols=194  Identities=23%  Similarity=0.359  Sum_probs=140.1

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CCCCCCceEEE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFG  188 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~  188 (376)
                      +..+.+.-|+|.|+|++++..||+++||+++..+..      ..+-++.+..   ..+.|.+.+.... .....|+-|++
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~------~~v~L~vgg~---~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETD------GSVTLGVGGT---PLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccC------ceEEEeeCCE---EEEEEEeCCCCCCCCccccceeeee
Confidence            455689999999999999999999999999988765      4556666643   4556666444332 23567999999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC------------------------
Q 017144          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------------  241 (376)
Q Consensus       189 f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~------------------------  241 (376)
                      |.+++   +.++..++...|+++. ++.++.  ....+||.||+||.||++..++.                        
T Consensus        77 fLlP~r~~L~~~l~hl~~~~~~l~-Ga~DH~--vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~  153 (265)
T COG2514          77 FLLPTREDLARVLNHLAEEGIPLV-GASDHL--VSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLE  153 (265)
T ss_pred             eecCCHHHHHHHHHHHHhcCCccc-ccCcch--hheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhh
Confidence            99997   5666778888899886 344543  57899999999999999966542                        


Q ss_pred             ------------CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcc-cCCCccc
Q 017144          242 ------------PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTY-NHGVTEY  308 (376)
Q Consensus       242 ------------~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~-~~~~~~~  308 (376)
                                  ...|+||.|.|.|++++.+||+++|||++...  .+    ...|+.+|+  .++.+.... +......
T Consensus       154 ~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~--~~----~A~F~a~G~--YHHHia~N~W~s~~~~~  225 (265)
T COG2514         154 EATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTAR--GP----SALFLASGD--YHHHLAANTWNSRGARP  225 (265)
T ss_pred             hccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeec--CC----cceEEecCC--cceeEEEeccccCCCCC
Confidence                        11379999999999999999999999999866  22    235667654  355554432 2111111


Q ss_pred             --cCCCceeEEEEEeCC
Q 017144          309 --DKGNGYAQIAIGTDD  323 (376)
Q Consensus       309 --~~g~g~~hiaf~V~D  323 (376)
                        ..-.|+..+.+.+++
T Consensus       226 ~~~~~~GLa~~~i~~~~  242 (265)
T COG2514         226 RNANASGLAWLEIHTPD  242 (265)
T ss_pred             CCCCCCCcceEEEEcCC
Confidence              223477777777766

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.83  E-value=4.1e-19  Score=150.24  Aligned_cols=138  Identities=63%  Similarity=1.079  Sum_probs=107.5

Q ss_pred             ccccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEE
Q 017144          108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (376)
Q Consensus       108 ~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi  187 (376)
                      .++..++|+||.|.|+|++++.+||+++|||++..+...++..+..++++.+....+..+++.......+...+.++.|+
T Consensus        11 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi   90 (150)
T TIGR00068        11 PKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHI   90 (150)
T ss_pred             cccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEE
Confidence            46677899999999999999999999999999877655444444566777654444455666543332233345688999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCCc
Q 017144          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPL  245 (376)
Q Consensus       188 ~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  245 (376)
                      +|.|+|+++++++|.++|+++..+|...+++..+.+||+||||+.|||++......++
T Consensus        91 ~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~  148 (150)
T TIGR00068        91 AIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGL  148 (150)
T ss_pred             EEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhc
Confidence            9999999999999999999988877666666677889999999999999887655443

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.80  E-value=7.9e-19  Score=155.64  Aligned_cols=125  Identities=33%  Similarity=0.575  Sum_probs=104.8

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCC---------------CceEEEEcccCCCcc-
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED---------------KNAVLELTYNHGVTE-  307 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~l~~~~~~~~-  307 (376)
                      .+.|++|+|.|++++++||+++|||++..+.+.++.++.++|+++++..               ....|||.++++... 
T Consensus        75 ~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e~~  154 (233)
T PLN02367         75 IMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTESD  154 (233)
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCCcc
Confidence            4899999999999999999999999999888888888999999754321               246899998877542 


Q ss_pred             -----ccCC----CceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          308 -----YDKG----NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       308 -----~~~g----~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                           +..|    .|++|++|.|+|+++++++|+++|+++..+|...+.  .+++|++||||++|||++...
T Consensus       155 ~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        155 PDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             ccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccc
Confidence                 4433    489999999999999999999999999987754332  478999999999999999764

>PLN02367 lactoylglutathione lyase

Probab=99.80  E-value=2.3e-18  Score=152.73  Aligned_cols=128  Identities=37%  Similarity=0.685  Sum_probs=104.8

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCC---------------ceEEEEEEecCCCC
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED---------------SHFVVELTYNYGVD  176 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~l~l~~~~~~~  176 (376)
                      ...+.|+.|+|.|++++++||+++|||++..+.+.++..+..+|+++++..               ....|||.++.+..
T Consensus        73 ~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e  152 (233)
T PLN02367         73 GYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTE  152 (233)
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCC
Confidence            447999999999999999999999999999998888888889999764311               13478998765543


Q ss_pred             C------CCCC----CCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          177 K------YDIG----TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       177 ~------~~~~----~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      .      +..+    .|++||+|.|+|+++++++|+++|+++...|....  ..+.+|++||||+.|||++...-
T Consensus       153 ~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~--~~riaFIkDPDGn~IEL~e~~~~  225 (233)
T PLN02367        153 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGK--MKGIAFIKDPDGYWIEIFDLKTI  225 (233)
T ss_pred             ccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCC--ceEEEEEECCCCCEEEEEecccc
Confidence            1      3332    58999999999999999999999999987776432  35678999999999999987654

>PRK10291 glyoxalase I; Provisional

Probab=99.80  E-value=3.2e-18  Score=140.87  Aligned_cols=124  Identities=56%  Similarity=1.059  Sum_probs=97.1

Q ss_pred             EEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHH
Q 017144          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (376)
Q Consensus       119 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~~~  198 (376)
                      .|.|+|++++++||+++|||++..+...++..+..+|+.+++......+++....+..++..+.++.|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            37899999999999999999988766555555677788776544344566665444344445668999999999999999


Q ss_pred             HHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCC
Q 017144          199 DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (376)
Q Consensus       199 ~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  242 (376)
                      ++|+++|+++..+|.+.+++..+.+||+||||+.|||++....+
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~  124 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  124 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccccc
Confidence            99999999988776666555567788999999999999977543

>PRK10291 glyoxalase I; Provisional

Probab=99.78  E-value=4.4e-18  Score=140.04  Aligned_cols=122  Identities=49%  Similarity=0.935  Sum_probs=97.1

Q ss_pred             ccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHHH
Q 017144          249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTA  328 (376)
Q Consensus       249 ~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~  328 (376)
                      +|.|.|++++++||+++|||++......++..+.+.++..++......+++....+...+..+.+++|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            47899999999999999999987665556666777787765444455667765444444456678999999999999999


Q ss_pred             HHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          329 EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       329 ~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      ++|+++|+++..++.+.+.+..+++|++||||+.|||++..+
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            999999999988776665554467889999999999999763

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.78  E-value=5e-17  Score=155.68  Aligned_cols=249  Identities=21%  Similarity=0.271  Sum_probs=169.5

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC--ceEEEEEeeCCCCceEEEEEEecCCC-----------------
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGV-----------------  175 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~-----------------  175 (376)
                      ++||.+.|.|..++..||+..|||+.+.......+  ......++-|+    +.+.+......                 
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r~g~----i~fv~~~~~~~~~~~~~~~~~~~~~~~~   76 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLRSGD----LVFLFTAPYSPKIGAGDDDPASTAPHPS   76 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEEeCC----EEEEEeCCCCCccccccccccccccccc
Confidence            58999999999999999999999998876543222  12233444332    22323222101                 


Q ss_pred             --CC------CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCC----CCeEEEEEEcCCCCEEEEeecCC---
Q 017144          176 --DK------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG----GNTVIAFIEDPDGYKFELLERGP---  240 (376)
Q Consensus       176 --~~------~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~----~~~~~~~~~DPdG~~iel~~~~~---  240 (376)
                        ..      ..+|+|+.-++|+|+|++++++++.++|++...+|.....    +.-...-+..++|..+.|+++..   
T Consensus        77 ~~~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~  156 (398)
T PLN02875         77 FSSDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDG  156 (398)
T ss_pred             cCcHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCC
Confidence              00      0267899999999999999999999999998777665432    12345556777888888776421   


Q ss_pred             ------------C--------CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCC-----CeEEEEeecCCCCCce
Q 017144          241 ------------T--------PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-----KYTIAVMGYGPEDKNA  295 (376)
Q Consensus       241 ------------~--------~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~  295 (376)
                                  .        -..|+|++++|.+++.++.||+++|||+.....+.++.     +.....+..+  ++..
T Consensus       157 ~~f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp--~g~v  234 (398)
T PLN02875        157 AKFLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASN--NEMV  234 (398)
T ss_pred             CccCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcC--CCcE
Confidence                        0        12589999999999999999999999998865443321     1334444432  2356


Q ss_pred             EEEEcccCC----Cc------cccCCCceeEEEEEeCCHHHHHHHHHHc----CCeeecCC-c--------cCCC---C-
Q 017144          296 VLELTYNHG----VT------EYDKGNGYAQIAIGTDDVYKTAEAIKLS----GGKITREP-G--------PLPG---I-  348 (376)
Q Consensus       296 ~l~l~~~~~----~~------~~~~g~g~~hiaf~V~Dl~~~~~~l~~~----G~~~~~~p-~--------~~~~---~-  348 (376)
                      .++|..+..    .+      ...+|+|++||||.|+|+.+++++|+++    |++++..| .        +.+.   . 
T Consensus       235 ~ipLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e  314 (398)
T PLN02875        235 LLPLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEE  314 (398)
T ss_pred             EEEeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChh
Confidence            777776532    11      1256899999999999999999999999    99999855 1        1121   0 


Q ss_pred             ------CceEEEEECCCCCeEEEEecc
Q 017144          349 ------NTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       349 ------~~~~~~~~DPdG~~iel~~~~  369 (376)
                            ...+.+=+|.+|.++++...+
T Consensus       315 ~~~~L~~~~ILvD~d~~G~LLQIFTkp  341 (398)
T PLN02875        315 QIKECEELGILVDKDDQGVLLQIFTKP  341 (398)
T ss_pred             hHHHHHHcCEEEecCCCceEEEEeccc
Confidence                  113556667777777776655

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.77  E-value=2.3e-17  Score=143.39  Aligned_cols=130  Identities=34%  Similarity=0.641  Sum_probs=101.1

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCC---------------ceEEEEEEecC
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED---------------SHFVVELTYNY  173 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~---------------~~~~l~l~~~~  173 (376)
                      .+...++.|+.|+|.|++++++||+++|||++..+...++..+..+|++++...               ....|+|....
T Consensus        22 ~~~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~  101 (185)
T PLN03042         22 ATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNW  101 (185)
T ss_pred             CCCCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcC
Confidence            344558999999999999999999999999998887777777788888754311               12478888654


Q ss_pred             CCCC------CC----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          174 GVDK------YD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       174 ~~~~------~~----~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      +...      +.    .+.|+.|++|.|+|+++++++|+++|+++...|...  ...+.+|++||||+.|||++...
T Consensus       102 ~~~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~--~~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        102 GTESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDG--KMKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             CCcccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccC--CceeEEEEECCCCCEEEEEECCC
Confidence            3221      22    235899999999999999999999999998766432  23567888999999999998653

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.76  E-value=2.5e-17  Score=138.14  Aligned_cols=118  Identities=17%  Similarity=0.254  Sum_probs=89.7

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCc-eEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      .++|+||+|.|+|++++.+||+++|||++..+...+++. ...+|+..+..  ++.+.+...       .+.+++|++|.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~~-------~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVGG-------PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEecC-------CCCCceEEEEE
Confidence            458999999999999999999999999987765433222 23557765543  334444332       13578999999


Q ss_pred             eCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          191 VEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       191 V~d~d~---~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      |+|+++   +.++|+++|+++...|.++..+.++++||.|||||.|||...
T Consensus        75 v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            999887   567999999998877776554457789999999999999753

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.76  E-value=3.8e-17  Score=133.29  Aligned_cols=114  Identities=45%  Similarity=0.869  Sum_probs=89.2

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC-----------CceEEEEEeeCCCCceEEEEEEecCCCCCCCCCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGT  182 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~  182 (376)
                      ++.|++|+|.|+++|++||+++|||++..+...++           +.+..+++++++...+..++|.++.+..+++.+.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            68999999999999999999999999987775554           3344466766544456789999877666666555


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       183 g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      +  |++|.|++. ++.++|+++|+++...|.      + +++++||||+.|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~------~-~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNAKKHNWPVTEVED------G-VYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHHHHCCCceecCCC------C-EEEEECCCCCEEEEec
Confidence            5  667777776 556999999999876543      1 7889999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.76  E-value=2.1e-17  Score=139.76  Aligned_cols=131  Identities=48%  Similarity=0.875  Sum_probs=101.7

Q ss_pred             CCCCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEE
Q 017144          240 PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  319 (376)
Q Consensus       240 ~~~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf  319 (376)
                      ....++.|+.|.|.|++++.+||+++|||++......+...+.+.+++.+.......+++....+......+.+..|++|
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f   92 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAI   92 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEE
Confidence            34567999999999999999999999999987655555555566666654333345566654433333445568899999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          320 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       320 ~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      .|+|+++++++++++|+++..+|...+.+..+.+|++||+|+.|||++..+
T Consensus        93 ~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  143 (150)
T TIGR00068        93 GVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS  143 (150)
T ss_pred             ecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCc
Confidence            999999999999999999998886666554578899999999999999774

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.75  E-value=5.6e-17  Score=131.31  Aligned_cols=120  Identities=53%  Similarity=0.927  Sum_probs=92.3

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC-CCCCCCCCceEEEEEeCC
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~~~~~~~g~~hi~f~V~d  193 (376)
                      |.||+|.|+|++++.+||+++|||++......++..+..+++.......+..+++...... .++..+.++.|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5899999999999999999999999887655444445567777654112345555543222 233344578899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       194 ~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      +++++++++++|+++..+|...  ++++.+||+||+|+.+|++
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG--GMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC--CCceEEEEECCCCCEEEeC
Confidence            9999999999999998887655  3567899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.74  E-value=4.1e-17  Score=141.84  Aligned_cols=126  Identities=30%  Similarity=0.555  Sum_probs=99.5

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCC---------------CceEEEEcccCCCcc
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED---------------KNAVLELTYNHGVTE  307 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~l~~~~~~~~  307 (376)
                      ..+.|++|.|.|++++++||+++|||++..+...++.++.+++++.+...               ....++|.++.+...
T Consensus        26 ~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~~~  105 (185)
T PLN03042         26 YIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTES  105 (185)
T ss_pred             cEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCCcc
Confidence            35899999999999999999999999998877666777888888753211               245788887554321


Q ss_pred             ------ccC----CCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          308 ------YDK----GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       308 ------~~~----g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                            +..    +.|+.|++|.|+|+++++++|+++|+++...|....  ..+++|++||||++|||++...
T Consensus       106 ~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~--~~~~~fi~DPdG~~IEl~e~~~  176 (185)
T PLN03042        106 DPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK--MKGLAFIKDPDGYWIEIFDLKR  176 (185)
T ss_pred             cccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC--ceeEEEEECCCCCEEEEEECCC
Confidence                  221    248999999999999999999999999987664322  2467899999999999998763

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.74  E-value=7.3e-18  Score=149.68  Aligned_cols=158  Identities=18%  Similarity=0.267  Sum_probs=125.3

Q ss_pred             cccchhhhhccccCCccccccchHHHHHHcCcccccccCCCccCCccccCccc----------cccccccc---------
Q 017144           51 SRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQN----------VLDWVKSD---------  111 (376)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~----------~~~~~~~~---------  111 (376)
                      -+.-.|||+|+++|+++++|+...++... |....+++||.++++.|+.||+|          +..|.+..         
T Consensus        67 ~~~aGLyH~AfLlP~r~~L~~~l~hl~~~-~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~  145 (265)
T COG2514          67 PRAAGLYHTAFLLPTREDLARVLNHLAEE-GIPLVGASDHLVSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEP  145 (265)
T ss_pred             ccccceeeeeeecCCHHHHHHHHHHHHhc-CCcccccCcchhheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccc
Confidence            35678999999999999999999888775 67788999999999999999999          33343222         


Q ss_pred             --------------------ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEe
Q 017144          112 --------------------KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY  171 (376)
Q Consensus       112 --------------------~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~  171 (376)
                                          .+.|+||+|.|.|++++.+||+++|||+++.+.+      ...|+..|.+++|+.++.+.
T Consensus       146 ld~~~ll~~~~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHHHia~N~W~  219 (265)
T COG2514         146 LDVEALLEEATKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHHHLAANTWN  219 (265)
T ss_pred             cCHHHHhhhccccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcceeEEEeccc
Confidence                                2479999999999999999999999999988733      57899999999898888888


Q ss_pred             cCCCCCCC-CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          172 NYGVDKYD-IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       172 ~~~~~~~~-~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      ..+..+.+ ...|+.++.+.+++-..+....                  .   ...||.|+.+.++
T Consensus       220 s~~~~~~~~~~~GLa~~~i~~~~~~~l~~~~------------------~---~~~Dp~G~~i~~~  264 (265)
T COG2514         220 SRGARPRNANASGLAWLEIHTPDPEKLDATG------------------T---RLTDPWGIVIRVV  264 (265)
T ss_pred             cCCCCCCCCCCCCcceEEEEcCCcccccccc------------------c---ceecCCCceEEEe
Confidence            76654432 4578999999888744321100                  0   0289999998875

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.74  E-value=1.1e-16  Score=133.76  Aligned_cols=122  Identities=26%  Similarity=0.329  Sum_probs=89.9

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC-----------CceEEEEEeeCCCCceEEEEEEecCCCC-----
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----------DRYTNAFLGYGPEDSHFVVELTYNYGVD-----  176 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----------~~~~~~~l~~g~~~~~~~l~l~~~~~~~-----  176 (376)
                      .+++||+|.|+|++++++||++ |||++..+...++           .....+++.....  ...+++.......     
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g--~~~iel~~~~~~~~~~~~   78 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDG--HSRLELSKFHHPAVIADH   78 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCC--CceEEEEEecCCCCcCcC
Confidence            4899999999999999999998 9998865543221           1123344443222  4567776632111     


Q ss_pred             --CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          177 --KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       177 --~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                        ....+.|+.|+||.|+|+++++++|+++|+++..+|.... ++.+.+|++||||+.|||+|.
T Consensus        79 ~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~-~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          79 RPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYE-NSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecC-CCeEEEEEECCCCCEEEeeec
Confidence              1123468899999999999999999999999987665544 367889999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.74  E-value=1.1e-16  Score=132.80  Aligned_cols=118  Identities=25%  Similarity=0.315  Sum_probs=91.4

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      .+|+||+|.|+|++++++||+++|||++..+..     ....|+..+....++.+.+.....     ...|+.|++|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~-----~~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK-----GRGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec-----CcEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            479999999999999999999999999876542     135677665322355666654321     1368999999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          193 DVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       193 d~d~~~---~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      |++++.   ++|+++|+++...|...+.++.+++||+||+|+.|||.....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            988766   599999999887777666566778999999999999996543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK11478 putative lyase; Provisional

Probab=99.73  E-value=1.3e-16  Score=130.90  Aligned_cols=122  Identities=21%  Similarity=0.296  Sum_probs=85.6

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC-CceEEEEEeeCCCCceEEEEEEecCCC---CCCCCCCCceE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGH  186 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~~~~~~g~~h  186 (376)
                      ...+++||+|.|+|++++++||+++|||++..+...++ ..+. ..+..+.   +..+++......   .......|+.|
T Consensus         3 ~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~-~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~g~~h   78 (129)
T PRK11478          3 GLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWK-GDLALNG---QYVIELFSFPFPPERPSRPEACGLRH   78 (129)
T ss_pred             CcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccce-eeEecCC---CcEEEEEEecCCCCCCCCCCCCceeE
Confidence            34689999999999999999999999999864322111 1111 1222222   345666542211   11123457899


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       187 i~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      ++|.|+|+++++++|++.|+++...+.. +.++.+.+||+||||+.||+++
T Consensus        79 i~f~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         79 LAFSVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEEEeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999999999998644322 2235688999999999999986

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.73  E-value=3.6e-17  Score=138.83  Aligned_cols=119  Identities=26%  Similarity=0.379  Sum_probs=90.4

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC-CCceEEEEEeeCCCC---ceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-EDRYTNAFLGYGPED---SHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~---~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      +|+||+|.|+|++++++||+++|||++..+...+ ......+|+.+++..   .++.+.+...       .+.+++|+||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-------~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQG-------PESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhcC-------CCCceeEEEE
Confidence            5899999999999999999999999987665433 223356777764321   1112222211       1468999999


Q ss_pred             EeCCHHHHH---HHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          190 AVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       190 ~V~d~d~~~---~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .|+|++++.   ++|+++|+++..+|+.+..+...++|++||+||.|||....
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999999886   89999999998888777655667889999999999999554

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.73  E-value=1e-16  Score=130.35  Aligned_cols=115  Identities=29%  Similarity=0.323  Sum_probs=85.7

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      .++|+|+.|.|+|++++++||+++|||++.....  +   ..+++.......++.+.+...       ...++.|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~---~~~~~~~~~~~~~~~~~l~~~-------~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--Q---GRVYLKAWDEFDHHSIVLREA-------DTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--C---ceEEEEccCCCcccEEEeccC-------CCCCeeEEEEEe
Confidence            4589999999999999999999999999876532  1   234555432222344544321       235788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       192 ~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +   |+++++++|+++|+++...|.....+.++.+||+|||||.||+...
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  119 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYAD  119 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEe
Confidence            7   6889999999999998765544333456789999999999999864

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>PLN02300 lactoylglutathione lyase

Probab=99.73  E-value=2.1e-16  Score=147.95  Aligned_cols=182  Identities=40%  Similarity=0.696  Sum_probs=128.5

Q ss_pred             hhhhhccccCCccccccchHHHHHHcCcccccccC---CCccCCccccCccc-ccccc--cccceeeEEEEEEeCChhHH
Q 017144           55 ALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTS---GNMAPTSNTVTEQN-VLDWV--KSDKRRMLHVVYRVGDLDKT  128 (376)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~p~~-~~~~~--~~~~~~i~Hv~l~v~Dl~~a  128 (376)
                      .+.|+++.+++-   -... +.++..|........   +......++.||+| .++..  .....++.|+.|.|+|++++
T Consensus        93 g~~hia~~v~dv---d~~~-~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~~d~~~a  168 (286)
T PLN02300         93 GFGHFGIAVEDV---AKTV-ELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRS  168 (286)
T ss_pred             CccEEEEEeCCH---HHHH-HHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEeCCHHHH
Confidence            467999999764   2223 334444432221111   11112356789999 33332  23456899999999999999


Q ss_pred             HHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHHHHHHHcCCee
Q 017144          129 IKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKV  208 (376)
Q Consensus       129 ~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i  208 (376)
                      .+||+++|||++......++..+..+++.++.......+++....+...+..+++.+|++|.|+|+++++++++++|+++
T Consensus       169 ~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~~~~G~~v  248 (286)
T PLN02300        169 IKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAIKLVGGKI  248 (286)
T ss_pred             HHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHHHHcCCeE
Confidence            99999999999986555455556777776543322335666554443344456889999999999999999999999999


Q ss_pred             ecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          209 TREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       209 ~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      ..+|...++.+++.++|+||||+.++|++...
T Consensus       249 ~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~  280 (286)
T PLN02300        249 TREPGPLPGINTKITACLDPDGWKTVFVDNID  280 (286)
T ss_pred             ecCCccCCCCceEEEEEECCCCCEEEEEccch
Confidence            99888887655678899999999999997653

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1.8e-16  Score=128.89  Aligned_cols=119  Identities=23%  Similarity=0.373  Sum_probs=87.7

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC---CCCCCCceEEEEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YDIGTGFGHFGIA  190 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~---~~~~~g~~hi~f~  190 (376)
                      +++||+|.|+|++++++||+++|||++..+...+...+..+|+..++   ...+++.+.....+   .....|+.|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            58999999999999999999999999865543333334556776652   34567665332211   1233588999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       191 V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      |+|   +++++++|+++|+++..+|...+. +.+.++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            964   789999999999999876654433 445677999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.72  E-value=3e-16  Score=130.46  Aligned_cols=123  Identities=21%  Similarity=0.264  Sum_probs=93.0

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC------CCCCCCceEEE
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDIGTGFGHFG  188 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~------~~~~~g~~hi~  188 (376)
                      |+|+.|.|+|++++++||+++|||++..+...+  .....++..+    ...+.+........      ...+.++.|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQG----DINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEcC----CEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999987664322  1223444322    34555554222111      12456889999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCC
Q 017144          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  244 (376)
Q Consensus       189 f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  244 (376)
                      |.|+|+++++++++++|+++..+|...+ ++.+.++++||||+.|||++.....++
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~-~~~~~~~i~dp~G~~ie~~~~~~~~~~  129 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEP-GELKIAAIKGYGDSLHTLVDRKGYKGP  129 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecC-CeEEEEEEeccCCcEEEEEecCCCCCc
Confidence            9999999999999999999998888754 477899999999999999997766443

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1.2e-16  Score=130.28  Aligned_cols=114  Identities=29%  Similarity=0.580  Sum_probs=89.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCC-----------CCeEEEEeecCCCCCceEEEEcccCCCccccCCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----------YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGN  312 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~  312 (376)
                      ++.|++|+|.|+++|++||+++|||++.++.+.++           +++..++++..++..+..++|.++++..+++.|.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            57899999999999999999999999887665554           4445556665444457789999988776676666


Q ss_pred             ceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          313 GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       313 g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      +  |++|.|++. ++.++|+++|+++...|.       .+++++||||++|||++
T Consensus        82 ~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNAKKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHHHHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            6  566666666 555999999999886543       27899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.72  E-value=2.1e-16  Score=131.93  Aligned_cols=118  Identities=23%  Similarity=0.414  Sum_probs=89.5

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      |+.+|.||.|.|+|++++++||+++|||++..+.+      ..+++..+.    ..+.+......+....+.++.|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g----~~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNG----LWIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCC----eEEEeeccCCCCCccCCCCeeEEEEE
Confidence            45689999999999999999999999999875432      345565542    34444433222222234568899999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          191 VE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       191 V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      ++  |+++++++++++|+++...|...++ +++.+||+|||||.|||.+..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCC
Confidence            98  8999999999999998766665544 568999999999999998654

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.72  E-value=1.8e-16  Score=149.02  Aligned_cols=174  Identities=21%  Similarity=0.314  Sum_probs=121.8

Q ss_pred             hhhhhccccCCccccccchHHHHHHcCcccccccCCCccCCccccCccc-cccc-----------------ccccceeeE
Q 017144           55 ALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQN-VLDW-----------------VKSDKRRML  116 (376)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~-----------------~~~~~~~i~  116 (376)
                      .+.|+++.+++..++.....++.+. |...............++.||+| .++.                 .....++|+
T Consensus        60 ~~~hiaf~v~~~~dl~~~~~~l~~~-Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~  138 (294)
T TIGR02295        60 ALSYIGFRVSKEEDLDKAADFFQKL-GHPVRLVRDGGQPEALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLD  138 (294)
T ss_pred             CccEEEEEeCCHHHHHHHHHHHHhc-CCcEEeecCCCCceEEEEECCCCCEEEEEEchhhcccccccccccCCccceeee
Confidence            5789999999888887766666664 43333222222345677889999 1111                 112357899


Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCH--
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV--  194 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~--  194 (376)
                      ||+|.|+|++++++||+++|||++..+...+.+.....|+..+..  ++.+.+...       .+.+++|+||.|+|.  
T Consensus       139 Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~Hiaf~v~d~~~  209 (294)
T TIGR02295       139 HFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG--VHDIALTNG-------NGPRLHHIAYWVHDPLN  209 (294)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC--cCceEeecC-------CCCceeeEEEEcCCHHH
Confidence            999999999999999999999998766543333333556654432  233444321       236899999999994  


Q ss_pred             -HHHHHHHHHcCCe--eecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          195 -AKTVDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       195 -d~~~~rl~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                       +++.++|+++|++  +...|+.+..+...++|++||+|+.||++..
T Consensus       210 v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~  256 (294)
T TIGR02295       210 IIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTG  256 (294)
T ss_pred             HHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEec
Confidence             4568899999997  6666766555566789999999999999864

The enzyme from Bacillus brevis contains manganese.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.71  E-value=2.3e-16  Score=127.72  Aligned_cols=120  Identities=41%  Similarity=0.763  Sum_probs=92.5

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC-ccccCCCceeEEEEEeCC
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV-TEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~-~~~~~g~g~~hiaf~V~D  323 (376)
                      +.|+.|.|+|++++.+||+++||+++......++....++++.......+..+++....+. .....+.+..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999876554444445666666533113456666554332 223445688999999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      +++++++++++|+++..+|....  ..+++||+||+|++|||+
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~~--~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDGG--MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccCC--CceEEEEECCCCCEEEeC
Confidence            99999999999999998876553  357899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.71  E-value=3.2e-16  Score=134.24  Aligned_cols=125  Identities=29%  Similarity=0.340  Sum_probs=88.4

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEe----ec--------------CCCceEEEEEeeCCCCceEEEEEEecCC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR----DI--------------PEDRYTNAFLGYGPEDSHFVVELTYNYG  174 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~----~~--------------~~~~~~~~~l~~g~~~~~~~l~l~~~~~  174 (376)
                      ++++||+|.|+|++++++||+++|||++..+.    ..              .......+++..++   ...+++++...
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            47999999999999999999999999885321    00              01123455665443   33477777543


Q ss_pred             CCCCC-----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCC-eec-CC-CCeEEEEEEcCCCCEEEEeecCC
Q 017144          175 VDKYD-----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP-GPV-KG-GNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       175 ~~~~~-----~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p-~~~-~~-~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      .....     .+.|+.|++|.|+|+++++++|+++|+++...+ ... ++ ...+.+|++|||||.|||++...
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            22111     246899999999999999999999998764332 211 11 13478999999999999998764

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.71  E-value=2.4e-16  Score=148.82  Aligned_cols=173  Identities=14%  Similarity=0.188  Sum_probs=119.4

Q ss_pred             chhhhhccccCCccccccchHHHHHHcCcccc-ccc--CCCccCCccccCccc-cccc----------------------
Q 017144           54 LALFQLGAAIPQSHFFGAKALKLLRAEGSTIE-AST--SGNMAPTSNTVTEQN-VLDW----------------------  107 (376)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~~~~~~~~p~~-~~~~----------------------  107 (376)
                      ..+.|+++.+++...+.....++.+. |.... ...  +.......++.||+| .+|.                      
T Consensus        59 ~g~~hiaf~v~~~~dl~~~~~~l~~~-G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~  137 (303)
T TIGR03211        59 AGLDHMAFKVESEADLERLVKRLEAY-GVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDP  137 (303)
T ss_pred             CceeEEEEEeCCHHHHHHHHHHHHHc-CCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccc
Confidence            35779999999988887777776654 43322 111  122234567789998 1110                      


Q ss_pred             -ccccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCce-EEEEEeeCCCCceEEEEEEecCCCCCCCCCCC-c
Q 017144          108 -VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRY-TNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-F  184 (376)
Q Consensus       108 -~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g-~  184 (376)
                       ..+..++|+||+|.|+|++++++||+++|||++..+...+++.. ...|+..+..  ++.+.+...       .+.| +
T Consensus       138 ~~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~~~g~~  208 (303)
T TIGR03211       138 LRGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK--AHDIAFVGD-------PEPGKL  208 (303)
T ss_pred             cCCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC--CcccceecC-------CCCCce
Confidence             11235689999999999999999999999999877654433322 3456655432  222333221       1234 8


Q ss_pred             eEEEEEeCCH---HHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          185 GHFGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       185 ~hi~f~V~d~---d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      +|+||.|+|+   ++++++|+++|+++..+|..+..+.++++||+||+|+.||+.
T Consensus       209 ~Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~  263 (303)
T TIGR03211       209 HHVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETF  263 (303)
T ss_pred             EEEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEe
Confidence            9999999974   457779999999998888766544568999999999999998

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.71  E-value=2.9e-16  Score=131.29  Aligned_cols=112  Identities=21%  Similarity=0.285  Sum_probs=89.1

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCH-
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV-  194 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~-  194 (376)
                      +||.|.|+|++++++||+++|||++..+.+     ...+|+.......++.+.+.+.       ...+++|++|.|+|. 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~-----~~~~~l~~~~~~~~h~~~~~~~-------~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIE-----DRIVFMRCHPNPFHHTFAVGPA-------SSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeC-----CEEEEEEcCCCCCcceeeeccC-------CCCceEEEEEECCCHH
Confidence            599999999999999999999999877642     1467787654333455544321       236899999999875 


Q ss_pred             --HHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          195 --AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       195 --d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                        ++++++|+++|+++..+|..++.++.+.+||+||+|+.||+.-..
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  115 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGM  115 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCc
Confidence              567999999999998888887767788999999999999998554

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.70  E-value=4.3e-16  Score=132.37  Aligned_cols=123  Identities=23%  Similarity=0.346  Sum_probs=93.8

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC---CCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCce
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP---EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  185 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~  185 (376)
                      ++..++|+||+|.|+|++++++||+++|||++......+   +.....+|+.++..  ++.+.+....      .+.++.
T Consensus         4 ~~~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~i~~~~~~------~~~g~~   75 (154)
T cd07237           4 VTGDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGR--HHSLALAEGP------GPKRIH   75 (154)
T ss_pred             ccCCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCC--CCCEEEEcCC------CCceeE
Confidence            345678999999999999999999999999987653322   11335677776543  3344444321      236799


Q ss_pred             EEEEEeCCHH---HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          186 HFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       186 hi~f~V~d~d---~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |++|.|+|.+   +++++|+++|+++..+|..++.++.+.+|++||+|+.|||....
T Consensus        76 Hiaf~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~  132 (154)
T cd07237          76 HLMLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGG  132 (154)
T ss_pred             EEEEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCc
Confidence            9999998755   68999999999998887776666778999999999999998554

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=7.8e-16  Score=124.91  Aligned_cols=121  Identities=30%  Similarity=0.372  Sum_probs=85.5

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC--C-CCCCCCCceEEEE
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--D-KYDIGTGFGHFGI  189 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--~-~~~~~~g~~hi~f  189 (376)
                      .+|+||+|.|+|++++++||+++|||++......++.......+....   ...+++......  . ....+.|+.|++|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~~   78 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLAF   78 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEEE
Confidence            479999999999999999999999999876543222111122232221   224455432211  1 1123468899999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       190 ~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      .|+|++++.++++++|+++...|.... .+.+.+|++||+|+.|||+|
T Consensus        79 ~v~d~~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          79 SVEDIEAAVKHLKAKGVEVEPIRVDEF-TGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCC-CceEEEEEECCCCCEEEecC
Confidence            999999999999999999876553333 35678999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.69  E-value=9e-16  Score=131.38  Aligned_cols=118  Identities=25%  Similarity=0.398  Sum_probs=85.8

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      ++|+||+|.|+|++++++||+++|||++......+.+.....|+..+..  ++.+.+...       .+.++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~--~~~i~l~~~-------~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGG--VHDTALTGG-------NGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCC--cceEEEecC-------CCCceeEEEEEcC
Confidence            5899999999999999999999999998755433233333456654433  334444332       2357899999998


Q ss_pred             C---HHHHHHHHHHcCCe--eecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          193 D---VAKTVDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       193 d---~d~~~~rl~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |   +++++++|+++|+.  +..+|..+..++.+++||+|||||.||+++..
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            6   66778899999986  33445544434567899999999999998644

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.69  E-value=4.7e-16  Score=129.24  Aligned_cols=120  Identities=20%  Similarity=0.252  Sum_probs=91.5

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc------ccCCCceeEEE
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE------YDKGNGYAQIA  318 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~------~~~g~g~~hia  318 (376)
                      ++|+.|.|+|++++++||+++|||++......++  ....++..    ....+.+........      ...+.+.+|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~----g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQ----GDINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEc----CCEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5799999999999999999999999976543321  23344432    134555543222111      12457899999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecccc
Q 017144          319 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  371 (376)
Q Consensus       319 f~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  371 (376)
                      |.|+|+++++++|+++|++++.+|...+++ .+.++++||||+.|||+++.+.
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~-~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGE-LKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCe-EEEEEEeccCCcEEEEEecCCC
Confidence            999999999999999999999988764543 5899999999999999998764

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=4.9e-16  Score=129.89  Aligned_cols=121  Identities=20%  Similarity=0.285  Sum_probs=89.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCC-----------CCCeEEEEeecCCCCCceEEEEcccCCCcc-----
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP-----------DYKYTIAVMGYGPEDKNAVLELTYNHGVTE-----  307 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~-----  307 (376)
                      ++.|++|.|.|++++++||++ |||++......+           ..+..++++..  .+++..++|.....+..     
T Consensus         3 ~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~g~~~iel~~~~~~~~~~~~~   79 (142)
T cd08353           3 RMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRT--PDGHSRLELSKFHHPAVIADHR   79 (142)
T ss_pred             eeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeC--CCCCceEEEEEecCCCCcCcCC
Confidence            578999999999999999998 999886543221           12344555542  22356677765322111     


Q ss_pred             --ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          308 --YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       308 --~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                        ...+.|+.|++|.|+|+++++++|+++|+++..++...+.+ .+++|++||||+.|||+|.
T Consensus        80 ~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~-~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          80 PAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENS-YRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCC-eEEEEEECCCCCEEEeeec
Confidence              12346889999999999999999999999998766544432 5889999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=8.1e-16  Score=124.97  Aligned_cols=113  Identities=21%  Similarity=0.324  Sum_probs=85.0

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      .+.+|+|++|.|+|++++++||+++|||++..+.+      ..+|+...+...++.+.+...       ...++.|++|.
T Consensus         3 ~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af~   69 (121)
T cd09013           3 DIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAWR   69 (121)
T ss_pred             CccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEEE
Confidence            45689999999999999999999999999876543      245665543323445555432       23578999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       191 V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      |+|   ++++.++++++|+++...+...  +.+..+||+|||||.+|+...
T Consensus        70 v~~~~~v~~~~~~l~~~G~~~~~~~~~~--~~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          70 ASSPEALERRVAALEASGLGIGWIEGDP--GHGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             cCCHHHHHHHHHHHHHcCCccccccCCC--CCcceEEEECCCCCEEEEEEe
Confidence            984   7788999999999875433222  245688999999999999854

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.68  E-value=2.9e-16  Score=133.25  Aligned_cols=120  Identities=18%  Similarity=0.191  Sum_probs=89.6

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCC-CCCeEEEEeecCCCC---CceEEEEcccCCCccccCCCceeEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP-DYKYTIAVMGYGPED---KNAVLELTYNHGVTEYDKGNGYAQIAI  319 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~l~~~~~~---~~~~l~l~~~~~~~~~~~g~g~~hiaf  319 (376)
                      +++|+.|.|+|++++++||+++||+++......+ ..+....++..+...   .++.+.+..       ..+++++|++|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            4789999999999999999999999987654333 223345566543210   001111110       12578999999


Q ss_pred             EeCCHHHHH---HHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          320 GTDDVYKTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       320 ~V~Dl~~~~---~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      .|+|++++.   ++|+++|+++.++++++..+...++|++||+||.|||.....
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~  127 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGD  127 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCce
Confidence            999999986   999999999999998887665678899999999999986653

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.68  E-value=7.3e-16  Score=125.05  Aligned_cols=114  Identities=27%  Similarity=0.356  Sum_probs=85.3

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      ++++.|+.|.|+|++++++||+++|||++....+      ..+|+.......++.+.+.+.       ...++.|++|.|
T Consensus         2 ~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~v   68 (121)
T cd07266           2 ILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFRV   68 (121)
T ss_pred             cceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeC-------CCCceeEEEEEC
Confidence            4689999999999999999999999999875432      234554322222344444432       125788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       192 ~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .   |+++++++++++|+++...|.....+.++.+|+.||||+.||++..
T Consensus        69 ~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~  118 (121)
T cd07266          69 RSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAE  118 (121)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEec
Confidence            5   6889999999999998766544444456789999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.68  E-value=2.2e-15  Score=129.66  Aligned_cols=123  Identities=21%  Similarity=0.338  Sum_probs=90.9

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      .+.+|+|++|.|+|++++++||+++|||++........+.....|+.....  ++.+.+.....    ....++.|++|.
T Consensus         3 ~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~----~~~~~~~hiaf~   76 (166)
T cd09014           3 GVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK--VHDVAYTRDPA----GARGRLHHLAYA   76 (166)
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC--ceeEEEecCCC----CCCCCceEEEEE
Confidence            456899999999999999999999999998766543333334567765433  33444433211    122468999999


Q ss_pred             eCCH---HHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          191 VEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       191 V~d~---d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |+|.   ++++++|+++|+++...|.....+...++|+.||+|+.|||+...
T Consensus        77 v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          77 LDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             CCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            9964   477889999999987777665544556799999999999999763

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.68  E-value=1e-15  Score=125.16  Aligned_cols=113  Identities=16%  Similarity=0.232  Sum_probs=85.7

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      +..+|.||+|.|+|++++.+||+++|||++..+.+      ...|++.+..  ++.+.+....        ++..|++|+
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~i~l~~~~--------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDAR--DHTLVYIEGD--------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCc--cEEEEEEeCC--------CceEEEEEE
Confidence            45689999999999999999999999999865432      2467776543  3445554321        356799999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEEcCCCCEEEEeecC
Q 017144          191 VED---VAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       191 V~d---~d~~~~rl~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |+|   +++++++++++|+++..++....  .+..+++||+|||||.||+....
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            986   99999999999999876554221  23467789999999999998543

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.67  E-value=9e-16  Score=125.49  Aligned_cols=119  Identities=31%  Similarity=0.520  Sum_probs=86.4

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCC-C---C--CCCCCceEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-K---Y--DIGTGFGHF  187 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-~---~--~~~~g~~hi  187 (376)
                      +|+|++|.|+|++++++||+++|||++......++.....+++..++    ..+++....... .   +  ..+.|+.|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGN----TKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCC----EEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            58999999999999999999999999876543333334556666542    245555432111 0   0  124678899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecC-CeecCCCCeEEEEE--EcCCCCEEEEee
Q 017144          188 GIAVEDVAKTVDLVKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLE  237 (376)
Q Consensus       188 ~f~V~d~d~~~~rl~~~G~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~  237 (376)
                      +|.|+|+++++++|+++|+++..+ |...+ ++.+.+|+  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGA-GGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCC-CCCEEEEecccccCcEEEEecC
Confidence            999999999999999999998764 43333 34566667  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.67  E-value=1.6e-15  Score=125.23  Aligned_cols=113  Identities=23%  Similarity=0.377  Sum_probs=83.2

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC-
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED-  193 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d-  193 (376)
                      |+||.|.|+|++++++||+++|||++..+.+      ...++..+.    ..+.+......+......++.|++|.|++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGE------KTAYFTIGG----TWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCC------ccceEeeCc----eEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            6899999999999999999999999865422      234455542    34444443322222223578899999985 


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          194 -VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       194 -~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                       +++++++|+++|+++..+|....+ .++.+||.|||||.|||.+.
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~  115 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTG  115 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccC-cceEEEEECCCCCEEEEecC
Confidence             999999999999998755544333 56889999999999999844

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.67  E-value=1.4e-15  Score=123.53  Aligned_cols=111  Identities=19%  Similarity=0.258  Sum_probs=84.2

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d  193 (376)
                      +|.||+|.|+|++++++||+++|||++..+..     ...+|+..++.  ++.+.+....       ..++.|++|.+++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~~--~~~~~l~~~~-------~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE-----DGALYLRMDDR--AWRIAVHPGE-------ADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC-----CCeEEEEccCC--ceEEEEEeCC-------CCceeEEEEEECC
Confidence            68999999999999999999999999865421     12456665433  4555554421       2577899999975


Q ss_pred             ---HHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEEcCCCCEEEEeec
Q 017144          194 ---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       194 ---~d~~~~rl~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                         +++++++|+++|+++...|.+.  ..+.++.+||+|||||.||++..
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence               8888999999999997655322  22345789999999999999854

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.67  E-value=6.6e-16  Score=125.66  Aligned_cols=120  Identities=28%  Similarity=0.404  Sum_probs=86.7

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeec--CCCceEEEEEeeCCCCceEEEEEEecCCCCCCCC---CCCceEEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI--PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI---GTGFGHFG  188 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~--~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~---~~g~~hi~  188 (376)
                      +|+||+|.|.|++++++||+++|||++......  ........++..+..  ++.+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG--HIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS--CEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc--ceeeeeeccccccccccccccccceeEE
Confidence            689999999999999999999999999987762  222334555555443  44444444322221111   01345666


Q ss_pred             EEeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEE
Q 017144          189 IAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (376)
Q Consensus       189 f~V~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  235 (376)
                      +.+.   |+++++++|++.|+++..+|.....+....+|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            6665   5778899999999999988888877777778999999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.67  E-value=2.1e-15  Score=126.64  Aligned_cols=113  Identities=23%  Similarity=0.419  Sum_probs=87.5

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d  193 (376)
                      +|+||.|.|+|++++++||+++|||++.....     ....|+..+..  ++.+.+...       ...++.|++|.|+|
T Consensus         4 ~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v~d   69 (144)
T cd07239           4 KISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG-----DQMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEMPS   69 (144)
T ss_pred             eeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC-----CeEEEEECCCC--cceEEEccC-------CCCceEEEEEECCC
Confidence            79999999999999999999999999865432     13467776654  234444332       12578899999999


Q ss_pred             HHHHH---HHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          194 VAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       194 ~d~~~---~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      ++++.   ++|+++|+++..+|.....+..+++||+||+|+.|||++...
T Consensus        70 ~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          70 IDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             HHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            77765   899999999887765555455678899999999999997653

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.67  E-value=1.2e-15  Score=143.01  Aligned_cols=174  Identities=21%  Similarity=0.293  Sum_probs=121.5

Q ss_pred             chhhhhccccCCccccccchHHHHHHcCcccccc-----cCCCccCCccccCccc-ccccc--------c----------
Q 017144           54 LALFQLGAAIPQSHFFGAKALKLLRAEGSTIEAS-----TSGNMAPTSNTVTEQN-VLDWV--------K----------  109 (376)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~~~~p~~-~~~~~--------~----------  109 (376)
                      -.+.|+++.|++...+.....+|.+ .|......     .....+...++.||+| .+|..        .          
T Consensus        57 ~~~~~~~f~V~~~~~l~~~~~~L~~-~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~  135 (286)
T TIGR03213        57 DDLAYAGWEVADEAGLDQVKEKLEK-AGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSG  135 (286)
T ss_pred             CCeeeEeeeeCCHHHHHHHHHHHHH-cCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCc
Confidence            3567899999998777666666655 45333221     1223345678889999 22211        0          


Q ss_pred             --ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC--C-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCc
Q 017144          110 --SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--D-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  184 (376)
Q Consensus       110 --~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~--~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~  184 (376)
                        ....+|+||+|.|+|++++.+||+++|||++..+...+.  + .+..+|+.+++.  ++.+.+....      ...++
T Consensus       136 ~~~~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~~~------~~~~~  207 (286)
T TIGR03213       136 FVTGDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAAGP------SEKRL  207 (286)
T ss_pred             cccCCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEecCC------CCCce
Confidence              113489999999999999999999999999876543221  1 123567877654  3344443321      24679


Q ss_pred             eEEEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          185 GHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       185 ~hi~f~V~d~d~---~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      +|++|.|+|.++   ++++|+++|+ +...|+.++.+..+++|++||+|+.||+..
T Consensus       208 ~Hiaf~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~  262 (286)
T TIGR03213       208 NHLMLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGW  262 (286)
T ss_pred             EEEEEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeec
Confidence            999999998776   7899999999 555666666667889999999999999985

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.67  E-value=2.4e-15  Score=128.07  Aligned_cols=118  Identities=19%  Similarity=0.193  Sum_probs=87.1

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CCCCCCceEEEEEeC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVE  192 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~f~V~  192 (376)
                      +|+||+|.|+|++++++||+++|||++..+..     ....|+..+. ..++.+++........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~-----~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG-----DRVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC-----CEEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            58999999999999999999999999976643     1233443332 2245677766432221 223357889999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       193 d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      |   +++++++|++.|+++.. +...  +..+.+||+||||+.||++...+
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~~--~~~~s~yf~DPdG~~iEl~~~~~  122 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVDR--FYFKSLYFREPGGILFEIATDGP  122 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-cccc--ccEEEEEEECCCCcEEEEEECCC
Confidence            8   89999999999998643 3332  34688999999999999998654

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.66  E-value=4.6e-16  Score=139.60  Aligned_cols=254  Identities=21%  Similarity=0.350  Sum_probs=170.4

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCc--eEEEEEeeCCCCceEEEEEEecCCCC-----CCCCCCCc
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR--YTNAFLGYGPEDSHFVVELTYNYGVD-----KYDIGTGF  184 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~~~~~l~l~~~~~~~-----~~~~~~g~  184 (376)
                      ..+++||.+.|.|...+..||+..|||+.....+.+.+.  +...-++.|  ...+.+.-...++-.     -..+|.|+
T Consensus        15 ~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g--~~vFv~~s~~~p~~~~~G~~l~~Hgdgv   92 (381)
T KOG0638|consen   15 FLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG--KIVFVFNSAYNPDNSEYGDHLVKHGDGV   92 (381)
T ss_pred             eeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC--CEEEEEecCCCCCchhhhhhhhhcccch
Confidence            358999999999999999999999999988755443321  111222222  112222222221111     12367788


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEEcCCCCEEEEeecCCC-----------------C---
Q 017144          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGPT-----------------P---  242 (376)
Q Consensus       185 ~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~~~-----------------~---  242 (376)
                      ..+||+|+|++++.+.+.++|+.+..+|.....  |..+++.++.+.-....+++....                 +   
T Consensus        93 kdvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~l~  172 (381)
T KOG0638|consen   93 KDVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPKLP  172 (381)
T ss_pred             hceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCCCC
Confidence            899999999999999999999999988876654  456777788887666666655431                 1   


Q ss_pred             ----CCccccccccC--ChhHHHHHHHHhhCCEEeceecCCCCCe-----EEEEeecCCCCCceEEEEcccC-CCc----
Q 017144          243 ----EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPDYKY-----TIAVMGYGPEDKNAVLELTYNH-GVT----  306 (376)
Q Consensus       243 ----~~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~~l~l~~~~-~~~----  306 (376)
                          ..++|++.+++  .++.+.+||.+.|||...+..+++.-+.     +.+.+..  .+.-..+.+.++. +.+    
T Consensus       173 ~~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vlan--~~esi~mpinEp~~G~k~ksQ  250 (381)
T KOG0638|consen  173 KGGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLAN--YEESIKMPINEPAPGKKKKSQ  250 (381)
T ss_pred             ccceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHhc--CCccEEEeccCCCCCCccHHH
Confidence                24799999998  6899999999999999887776543211     0111111  1112333333322 111    


Q ss_pred             -----cccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccC--------C--C---C-------CceEEEEECCCCC
Q 017144          307 -----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--------P--G---I-------NTKITACLDPDGW  361 (376)
Q Consensus       307 -----~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~--------~--~---~-------~~~~~~~~DPdG~  361 (376)
                           .++.|+|++|+++-++|+-.+++.+++.|++++.+|...        .  .   .       ...+..=.|-.|.
T Consensus       251 Iqeyv~y~gG~GvQHiaL~tedIi~Ai~~lr~rG~eFLs~Ps~YYqnl~erl~~~~~~vked~~~l~el~ILvD~De~gy  330 (381)
T KOG0638|consen  251 IQEYVEYHGGAGVQHIALNTEDIIEAIRGLRARGGEFLSPPSTYYQNLKERLSTSIRKVKEDIKLLEELGILVDFDENGY  330 (381)
T ss_pred             HHHHHHhcCCCceeeeeecchHHHHHHHHHHhcCCccccCCHHHHHhHHHHhhhhhhhhhccHHHHHHcCeEEecCCCcE
Confidence                 247899999999999999999999999999999888421        0  0   0       0134455677788


Q ss_pred             eEEEEecc
Q 017144          362 KSVFVDNL  369 (376)
Q Consensus       362 ~iel~~~~  369 (376)
                      ++++...+
T Consensus       331 LLQIFTKp  338 (381)
T KOG0638|consen  331 LLQIFTKP  338 (381)
T ss_pred             Eeeeeccc
Confidence            88887654

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.66  E-value=3.1e-15  Score=123.48  Aligned_cols=119  Identities=18%  Similarity=0.228  Sum_probs=84.0

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCc-eEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR-YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      |+.+|+||.|.|+|++++++||+++|||++..+.+..... ....++..+    ...+++......    ...+++|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~----~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIG----GLWIAIMEGDSL----QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcC----CeEEEEecCCCC----CCCCceEEEE
Confidence            4568999999999999999999999999876554221100 011222222    134555532211    2246899999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          190 AVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       190 ~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .|+  |++++.++|+++|+++..+ .+...+.++.+||+|||||.+||...
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~  122 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTG  122 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecC-CccccCCceEEEEECCCCCEEEEecC
Confidence            998  6999999999999987643 33333457899999999999999854

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK11478 putative lyase; Provisional

Probab=99.66  E-value=2.4e-15  Score=123.36  Aligned_cols=121  Identities=16%  Similarity=0.165  Sum_probs=83.4

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCC-CCeEEEEeecCCCCCceEEEEcccCCCc---cccCCCceeEEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKYTIAVMGYGPEDKNAVLELTYNHGVT---EYDKGNGYAQIA  318 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~l~~~~~~~---~~~~g~g~~hia  318 (376)
                      .+++|+.|.|+|++++.+||+++|||++......+. ..+.. .+..+   .+..+++.......   ......+..|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~-~~~~~---~~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKG-DLALN---GQYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEeccccccccccccee-eEecC---CCcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            458999999999999999999999999864322111 11111 12211   13556664322111   112335788999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          319 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       319 f~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      |.|+|+++++++|+++|+++...+.. +..+.+++||+||||+.|||++.
T Consensus        81 f~v~d~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         81 FSVDDIDAAVAHLESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEeCCHHHHHHHHHHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEeC
Confidence            99999999999999999998744322 32235889999999999999874

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.66  E-value=2.3e-15  Score=124.70  Aligned_cols=121  Identities=19%  Similarity=0.227  Sum_probs=90.4

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      |.++.|+.|.|.|++++.+||+++||+++.....  .   ...++..++...+..+.+....     ....+++|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~-----~~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTP-----APMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCC-----CCCCcceEEEEEe
Confidence            4578999999999999999999999999875432  1   1234544322234555554321     1247899999999


Q ss_pred             CCHHHHH---HHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccccc
Q 017144          322 DDVYKTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  372 (376)
Q Consensus       322 ~Dl~~~~---~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  372 (376)
                      +|+++..   ++|+++|+++.++|.+++.++.+++||+||+|+.|||.......
T Consensus        71 ~d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~~  124 (134)
T cd08360          71 GDIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDYV  124 (134)
T ss_pred             CCHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccccc
Confidence            9887766   59999999998888777765557799999999999998765443

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.66  E-value=3.3e-15  Score=125.31  Aligned_cols=118  Identities=11%  Similarity=0.128  Sum_probs=86.7

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCe-EEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEE
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKY-TIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  320 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~  320 (376)
                      ..+++|++|.|+|++++.+||+++|||++..+...+++.. ...++..+..  .+.+.+..       ..+.+++|++|.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~-------~~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVG-------GPDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEec-------CCCCCceEEEEE
Confidence            4568999999999999999999999999876653333322 2334443322  23333321       113678999999


Q ss_pred             eCCHHH---HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          321 TDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       321 V~Dl~~---~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      |+|+++   +.++|+++|+++.++|.++..+..+.+||+|||||.|||+..
T Consensus        75 v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            998777   678999999999888877664445789999999999999763

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.66  E-value=4.6e-15  Score=122.36  Aligned_cols=117  Identities=30%  Similarity=0.441  Sum_probs=90.3

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHH
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA  195 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d  195 (376)
                      +||.|.|+|++++++||+++|||++......+ +....+|+..+..  ++.+.+....      ...++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            59999999999999999999999987665433 3235667776543  3345554431      1468899999999875


Q ss_pred             ---HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          196 ---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       196 ---~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                         +++++++++|+++...|...+.+..++++|+||+|+.|||.+..+.
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCcc
Confidence               6789999999999877766555567889999999999999976654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=8e-15  Score=119.45  Aligned_cols=118  Identities=25%  Similarity=0.411  Sum_probs=88.0

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCC-CCCCCCCceEEEEEe
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-KYDIGTGFGHFGIAV  191 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-~~~~~~g~~hi~f~V  191 (376)
                      ++|+||+|.|+|++++++||+++|||++....+      ..+++..++.  ...+.+....... ......++.|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~~--~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGK--RPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCCC--eEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            479999999999999999999999999976632      3456665442  3455565543321 222346788999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          192 ED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       192 ~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      +|   +++++++++++|+++..+ ...  +..+.+||+|||||.+|+....+.
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~-~~~--~~~~~~~~~DPdG~~iEi~~~~~~  122 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGA-SDH--LVSEALYLSDPEGNGIEIYADRPR  122 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceecc-ccc--cceeEEEEECCCCCEEEEEEecCc
Confidence            85   889999999999987543 332  245789999999999999976653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.65  E-value=5.3e-15  Score=118.57  Aligned_cols=114  Identities=24%  Similarity=0.232  Sum_probs=84.9

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCH
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  194 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~  194 (376)
                      +.|++|.|+|++++++||+++||+++..... +..  ..+++..++.   ..+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGGG---AVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCCc---cEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999875542 112  2344554431   223333322211  1234567899999999


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       195 d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      ++++++|+++|+++..+|...+ +.++.++++|||||.|+|+|
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIP-GVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccC-CcEEEEEEECCCCCEEEeEC
Confidence            9999999999999988887665 46689999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=2.7e-15  Score=121.96  Aligned_cols=118  Identities=24%  Similarity=0.328  Sum_probs=84.8

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc---ccCCCceeEEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE---YDKGNGYAQIAIG  320 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~---~~~g~g~~hiaf~  320 (376)
                      ++.|+.|.|.|++++++||+++|||++......+...+...++..++   +..+++........   .....++.|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            47899999999999999999999999865433333334444555432   35566654322211   1233578999999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEE
Q 017144          321 TD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  365 (376)
Q Consensus       321 V~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  365 (376)
                      |+   |+++++++|+++|+++..+|...+.+ .+.++++|||||.|||
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g-~~~~~~~DPdG~~iE~  124 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDG-YYESVILDPEGNRIEI  124 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCC-eEEEEEECCCCCEEEe
Confidence            95   58999999999999998766544332 3457899999999998

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.65  E-value=3.1e-15  Score=128.12  Aligned_cols=124  Identities=23%  Similarity=0.235  Sum_probs=88.1

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEece----ecC--------------CCCCeEEEEeecCCCCCceEEEEcccCC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK----RDN--------------PDYKYTIAVMGYGPEDKNAVLELTYNHG  304 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~----~~~--------------~~~~~~~~~l~~~~~~~~~~l~l~~~~~  304 (376)
                      ..++|+.|.|.|++++++||+++|||++..+    ...              ....+.+.++..++   +..++|....+
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            4689999999999999999999999987521    010              11225556665432   34577765433


Q ss_pred             Ccc-c----cCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccC--CCC-CceEEEEECCCCCeEEEEecc
Q 017144          305 VTE-Y----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--PGI-NTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       305 ~~~-~----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~--~~~-~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ... .    ..+.|..|++|.|+|+++++++++++|+++..++...  ++. ..+++|++|||||.|||+++.
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  152 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHS  152 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcC
Confidence            211 1    1246899999999999999999999999865433211  221 137899999999999999986

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=5.2e-15  Score=120.04  Aligned_cols=117  Identities=29%  Similarity=0.465  Sum_probs=86.5

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC---CCCCCCCCceEEEE
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGHFGI  189 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~~~~~~g~~hi~f  189 (376)
                      ++|+|+.|.|+|++++++||+++|||++....+..    ...++..++    ..+++......   .......|..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~----~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV----GRKALRFGS----QKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeecccccC----CceEEEeCC----EEEEEecCCCccCcCccCCCCCCceEEE
Confidence            47999999999999999999999999987654311    123344432    24555442221   11224568899999


Q ss_pred             EeCC-HHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEEcCCCCEEEEee
Q 017144          190 AVED-VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       190 ~V~d-~d~~~~rl~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~  237 (376)
                      .+++ +++++++++++|+++..+|.+..+  +.++.+||+||||+.+|+.+
T Consensus        74 ~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          74 ITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            9985 999999999999998877665432  34688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.64  E-value=6.2e-15  Score=119.87  Aligned_cols=120  Identities=23%  Similarity=0.309  Sum_probs=85.0

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC-ceEEEEEeeCCCCceEEEEEEecCCCCC--CCCCCCceEEEEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDK--YDIGTGFGHFGIA  190 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~--~~~~~g~~hi~f~  190 (376)
                      +|+||+|.|.|++++++||+++|||++..+....+. ....+++.......+..+++........  .....++.|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            478999999999999999999999998776543221 1123344332112234567765433221  1233568899999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       191 V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      |+|   +++++++++++|+++..++..   ++.+.+||+||+|+.|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH---FGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee---cceEEEEEECCCCCEEEeC
Confidence            985   689999999999998654332   3578899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=5.5e-15  Score=119.92  Aligned_cols=119  Identities=18%  Similarity=0.300  Sum_probs=84.2

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCC-CCeEEEEeecCCCCCceEEEEcccCCC--c-cccCCCceeEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKYTIAVMGYGPEDKNAVLELTYNHGV--T-EYDKGNGYAQIAI  319 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~l~~~~~~--~-~~~~g~g~~hiaf  319 (376)
                      .+.|++|.|.|++++.+||+++|||++......++ ..+.+ .+...+   ...+++......  . ....+.+++|++|
T Consensus         3 ~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~-~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~~   78 (125)
T cd08352           3 GIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKL-DLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLAF   78 (125)
T ss_pred             ccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEE-EEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEEE
Confidence            58899999999999999999999999875432222 22222 222111   244554432111  1 1123468899999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          320 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       320 ~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      .|+|++++.++++++|+++...+..... +.+++|++||+|+.|||+|
T Consensus        79 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          79 SVEDIEAAVKHLKAKGVEVEPIRVDEFT-GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCC-ceEEEEEECCCCCEEEecC
Confidence            9999999999999999998876533232 3578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.64  E-value=8.4e-15  Score=119.39  Aligned_cols=112  Identities=16%  Similarity=0.261  Sum_probs=83.2

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      ..+++|+.|.|+|++++++||+++|||++....+    .  ..++..++   +..+.+....      ...+..|++|.|
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~---~~~l~~~~~~------~~~~~~h~a~~v   66 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPFG----P--FAVVKLDN---GVSLDFAQPD------GEIPPQHYAFLV   66 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC----C--EEEEEcCC---CcEEEEecCC------CCCCcceEEEEe
Confidence            4689999999999999999999999999865321    1  22333332   2345554421      123567999988


Q ss_pred             C--CHHHHHHHHHHcCCeeecCCeec------CCCCeEEEEEEcCCCCEEEEeec
Q 017144          192 E--DVAKTVDLVKAKGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       192 ~--d~d~~~~rl~~~G~~i~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +  |+++++++++++|+++...|...      ..++++.+||+|||||.||+++.
T Consensus        67 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          67 SEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            7  59999999999999987665543      12467999999999999999975

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.63  E-value=8.5e-15  Score=117.72  Aligned_cols=111  Identities=26%  Similarity=0.428  Sum_probs=86.6

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      ++|+|+.|.|+|++++++||+++|||++..+.+      ..+|+..+.. .++.+.+...       ...++.|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~-------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSED-DHHSLVLTEG-------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCCC-CcEEEEEEeC-------CCCCceeEEEEcC
Confidence            479999999999999999999999999986643      3466666522 2444555443       1257889999998


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          193 ---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       193 ---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                         +++++.++++++|+++...|...+ ++++.+|+.||+|+.+|++..
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEP-GVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCC-CCceEEEEECCCCCEEEEEEc
Confidence               578899999999999987765443 356889999999999999854

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=8.7e-15  Score=117.55  Aligned_cols=117  Identities=24%  Similarity=0.291  Sum_probs=84.7

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCC--CCCCCCCceEEEEEeCCH
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGHFGIAVEDV  194 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~--~~~~~~g~~hi~f~V~d~  194 (376)
                      ||+|.|+|++++++||+++|||++..+....+ ....+.+..... ....+.+.......  ......+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            89999999999999999999999987654222 122233332211 13455555433222  112345788999999999


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       195 d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      ++++++++++|+++..+|...  +.++.+|++||+|+.|||++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREM--PYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccC--CCceEEEEECCCCCEEEEeC
Confidence            999999999999998877433  34689999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.63  E-value=8.4e-15  Score=117.59  Aligned_cols=109  Identities=22%  Similarity=0.305  Sum_probs=81.1

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      ++|+||.|.|+|++++++||++ |||++..+.+      ..+|+..++.. ++.+.+...       ...++.|++|.|+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~------~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~af~v~   66 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD------DELYYRGYGTD-PFVYVARKG-------EKARFVGAAFEAA   66 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC------CeEEEecCCCc-cEEEEcccC-------CcCcccEEEEEEC
Confidence            5899999999999999999999 9999865532      23566543322 333322111       1257889999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       193 d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      |.+++.+.+++.|+.+...+. .+ ++++.+||.|||||.|||+..
T Consensus        67 ~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          67 SRADLEKAAALPGASVIDDLE-AP-GGGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CHHHHHHHHHcCCCeeecCCC-CC-CCceEEEEECCCCCEEEEEec
Confidence            999999999999998765432 23 356799999999999999854

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.63  E-value=8.8e-15  Score=118.33  Aligned_cols=113  Identities=26%  Similarity=0.338  Sum_probs=84.5

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      .+|+|+.|.|+|++++++||+++|||++....+      ..+++..+.. .++.+.+...       ..+++.|++|.|+
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGS-EHHILRLRRS-------DRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCC-ccEEEEeccC-------CCCCCceEEEEeC
Confidence            489999999999999999999999999865432      2345554332 2344444321       1246789999995


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCeecC-CCCeEEEEEEcCCCCEEEEeecC
Q 017144          193 ---DVAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       193 ---d~d~~~~rl~~~G~~i~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                         ++++++++++++|+++..+|.... .++++.++|.||+||.|||+...
T Consensus        68 ~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence               588999999999999887764432 23567899999999999998654

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=1.4e-14  Score=118.54  Aligned_cols=117  Identities=21%  Similarity=0.346  Sum_probs=87.2

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhc---CCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC---CCCCCCceEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECL---GMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YDIGTGFGHF  187 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~---~~~~~g~~hi  187 (376)
                      +|+||+|.|.|++++++||+++|   ||++..+.+  .   ...|... ..  +..+.+.......+   ...+.|+.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~---~~~~~~~-~~--~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D---GRSWRAG-DG--GTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c---CceEEec-CC--ceEEEEEecccCCCcccccCCcCeeEE
Confidence            58999999999999999999999   999876642  1   1233332 12  45666665433221   1234678999


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEEcCCCCEEEEeec
Q 017144          188 GIAVED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       188 ~f~V~d---~d~~~~rl~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +|.|+|   ++++.++++++|+++...+...  ..++.+.+|++||||+.+||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            999975   8899999999999998876653  23467899999999999999853

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.63  E-value=7.8e-15  Score=122.65  Aligned_cols=117  Identities=17%  Similarity=0.256  Sum_probs=89.0

Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC--
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD--  323 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D--  323 (376)
                      +|+.|.|+|++++.+||+++|||++..+...     ...++...+...++.+.+..       ....+++|++|.|+|  
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            5899999999999999999999998765321     34555543322233333221       124689999999975  


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccccccc
Q 017144          324 -VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  374 (376)
Q Consensus       324 -l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  374 (376)
                       ++++.++|+++|+++.++|++++.+..+++||+||+|+.|||.-..+..+|
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~~  120 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFAE  120 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceecc
Confidence             467899999999999999988876666889999999999999887765554

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=4.7e-15  Score=117.81  Aligned_cols=113  Identities=28%  Similarity=0.365  Sum_probs=84.0

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CCCCCCceEEEEEeCC
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVED  193 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~f~V~d  193 (376)
                      |+|++|.|+|++++++||+++|||++..+...+   ....++..++.   ..+++........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~---~~~~~~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFL---FPGAWLYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCC---CCceEEEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            689999999999999999999999986543222   13456665543   2445554332211 1234567899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEE
Q 017144          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (376)
Q Consensus       194 ~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  235 (376)
                      +++++++++++|+++..++..  ..+.+.+++.||+|+.|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP--GDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC--CCCccEEEEECCCCCEEeC
Confidence            999999999999998877654  2356789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.62  E-value=9.6e-15  Score=119.17  Aligned_cols=119  Identities=30%  Similarity=0.521  Sum_probs=87.4

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC-CCceEEEEEeeCCCCceEEEEEEecCCC-CC-----CCCCCCceEE
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-EDRYTNAFLGYGPEDSHFVVELTYNYGV-DK-----YDIGTGFGHF  187 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~~-----~~~~~g~~hi  187 (376)
                      |+||+|.|+|++++.+||+++|||++....... +.....+++..+    ...+++...... ..     ...+.|..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997655432 223345667653    345666653221 11     1245789999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCC--CCEEEEee
Q 017144          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLE  237 (376)
Q Consensus       188 ~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPd--G~~iel~~  237 (376)
                      +|.|+|+++++++++++|+++..+|.....++..++++.+|+  |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999999999887764444444555555555  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.62  E-value=7.9e-15  Score=119.84  Aligned_cols=119  Identities=23%  Similarity=0.362  Sum_probs=85.7

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc-c---c--cCCCceeEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-E---Y--DKGNGYAQI  317 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~---~--~~g~g~~hi  317 (376)
                      +++|+.|.|.|++++++||+++|||+.......++......++..+    ...++|....+.. .   +  ..+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            4789999999999999999999999987554333334455666543    2456664422111 1   1  124678899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecC-CccCCCCCceEEEE--ECCCCCeEEEEe
Q 017144          318 AIGTDDVYKTAEAIKLSGGKITRE-PGPLPGINTKITAC--LDPDGWKSVFVD  367 (376)
Q Consensus       318 af~V~Dl~~~~~~l~~~G~~~~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~  367 (376)
                      +|.|+|+++++++++++|+++..+ |..-+. +.+.+++  +||||+.||++|
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            999999999999999999999875 333233 2355666  799999999986

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.62  E-value=1.1e-14  Score=123.80  Aligned_cols=122  Identities=16%  Similarity=0.183  Sum_probs=90.9

Q ss_pred             CCCCccccccccCChhHHHHHHHHhhCCEEeceecCC---CCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEE
Q 017144          241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP---DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQI  317 (376)
Q Consensus       241 ~~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hi  317 (376)
                      .+.+++|+.|.|.|++++.+||+++|||++......+   +....+.++..+.  .+..+.+...      ..+.+++|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG--RHHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC--CCCCEEEEcC------CCCceeEEE
Confidence            3567999999999999999999999999986543221   1133455665432  2333333221      224689999


Q ss_pred             EEEeCCHH---HHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          318 AIGTDDVY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       318 af~V~Dl~---~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +|.|+|++   +++++|+++|+++..++.+++.+..+.+|++||+|+.|||.....
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            99998654   689999999999998887777555688999999999999987653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>PRK06724 hypothetical protein; Provisional

Probab=99.62  E-value=1.8e-14  Score=118.41  Aligned_cols=113  Identities=16%  Similarity=0.225  Sum_probs=79.4

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhc---CCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECL---GMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vL---G~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi  187 (376)
                      +..+|+||+|.|+|++++++||+++|   ||+......         + .  ..  ...+.+......  .....|..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~---------~-~--~g--~~~l~l~~~~~~--~~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVA---------Y-S--TG--ESEIYFKEVDEE--IVRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEe---------e-e--CC--CeeEEEecCCcc--ccCCCCceeE
Confidence            45689999999999999999999966   666532111         1 1  11  112222211110  1123578899


Q ss_pred             EEEe---CCHHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEEcCCCCEEEEeecC
Q 017144          188 GIAV---EDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       188 ~f~V---~d~d~~~~rl~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      ||.|   +|+|+++++++++|+++..+|...+  +++.+.+||+||||+.||+....
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   6799999999999999987776544  24558899999999999998663

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=1.3e-14  Score=117.70  Aligned_cols=113  Identities=19%  Similarity=0.206  Sum_probs=80.1

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEe----cCCCCCCCCCCCceEEEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY----NYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~----~~~~~~~~~~~g~~hi~f  189 (376)
                      ++.|+.|.|+|++++.+||+++|||++..+.+  .   .. .+. +.    ..+.+..    .....+...+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~---~~-~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E---NV-TFE-GG----FALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c---eE-EEe-cc----ceeccchhhhccCCcccccccCCceEEEE
Confidence            78999999999999999999999999864322  1   11 111 11    1111110    000111122345579999


Q ss_pred             EeCCHHHHHHHHHHcCC-eeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          190 AVEDVAKTVDLVKAKGG-KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       190 ~V~d~d~~~~rl~~~G~-~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .|+|+++++++|+++|+ ++..+|...++ +.+.++|+|||||.|||.++
T Consensus        71 ~v~dvd~~~~~l~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKLKRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHHHhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            99999999999999986 68777777664 56899999999999999865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.60  E-value=5.4e-14  Score=116.17  Aligned_cols=120  Identities=25%  Similarity=0.422  Sum_probs=86.2

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d  193 (376)
                      +|+||.|.|+|++++++||+++|||++....+.    ....|+..+.. .+..+.+.............++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~----~~~~~~~~~~~-~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL----GGLVFLSRDPD-EHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC----CcEEEEEecCC-CceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998765431    13456655411 1345555554332211234578899999998


Q ss_pred             HH---HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          194 VA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       194 ~d---~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      ++   +++++|.++|+++..++. .  +.++.+|++||+||.||++...+.
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~-~--~~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD-H--GNAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC-C--CceeEEEEECCCCCEEEEEEcCCC
Confidence            65   577899999998776432 2  346889999999999999976543

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.60  E-value=1.5e-14  Score=117.63  Aligned_cols=115  Identities=18%  Similarity=0.167  Sum_probs=83.1

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .++.|+.|.|+|++++.+||+++|||++.....  +.  . .++.......+..+.+..       ....+..|++|.|+
T Consensus         3 ~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~-~~~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v~   70 (122)
T cd07265           3 LRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--R-VYLKAWDEFDHHSIVLRE-------ADTAGLDFMGFKVL   70 (122)
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--e-EEEEccCCCcccEEEecc-------CCCCCeeEEEEEeC
Confidence            468999999999999999999999999865421  11  1 223322212233444422       12357889999997


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 ---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                         |+++++++++++|+++...|.....+.++.+||+|||||.|||....
T Consensus        71 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          71 DDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence               89999999999999988766543333347899999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.60  E-value=2e-14  Score=115.17  Aligned_cols=114  Identities=25%  Similarity=0.305  Sum_probs=84.1

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCH
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDV  324 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl  324 (376)
                      +.|++|.|+|++++++||+++||+++..... +...+  .++..++   ...+.+.......  .......|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~--~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDY--AVFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCce--EEEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4699999999999999999999999865442 12223  3344332   1223333221111  2345677999999999


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          325 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       325 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      ++++++++++|+++..+|...+++ ++.++++|||||.|+|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGV-GRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCc-EEEEEEECCCCCEEEeEC
Confidence            999999999999999988766643 589999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.60  E-value=2.3e-14  Score=122.63  Aligned_cols=120  Identities=22%  Similarity=0.261  Sum_probs=84.7

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      |.+++|++|.|+|++++++||+++|||++......+.......++...+  ....+.+..       ..++++.|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEec-------CCCCceeEEEEEc
Confidence            3568999999999999999999999999875443323333334444322  123333321       2346789999999


Q ss_pred             CC---HHHHHHHHHHcCCe--eecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          322 DD---VYKTAEAIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       322 ~D---l~~~~~~l~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +|   +++++++|+++|++  +..+|+.+.....+++|++|||||.|||+...-
T Consensus        72 ~~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~~  125 (161)
T cd07256          72 PEPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGDY  125 (161)
T ss_pred             CCHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecCc
Confidence            75   77888999999986  334555554434578999999999999986553

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.58  E-value=2.4e-14  Score=116.38  Aligned_cols=109  Identities=28%  Similarity=0.456  Sum_probs=79.6

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe--
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV--  191 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V--  191 (376)
                      +|+|+.|.|+|++++.+||+++|||++....+      ...++..+.  ..  +.+......   ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~--~~--~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD------KGAYLEAGD--LW--LCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC------CceEEecCC--EE--EEEecCCCC---CCCCCeeeEEEEeCH
Confidence            58999999999999999999999999876543      234555442  12  233221111   1235678999998  


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       192 ~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +|+++++++++++|+++..++..    .++.+||.|||||.|||....
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~----~~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS----EGDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC----CccEEEEECCCCCEEEEEeCC
Confidence            47999999999999988654332    246899999999999998654

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=5.5e-14  Score=114.42  Aligned_cols=115  Identities=19%  Similarity=0.288  Sum_probs=79.0

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecC--------CC--CCCCCCCCc
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY--------GV--DKYDIGTGF  184 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~--------~~--~~~~~~~g~  184 (376)
                      +.|+.|.|+|++++.+||+++|||++....+  ...+..  +..+.    ..+.+....        ..  .......+.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETGE----TTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCCc----EEEEEEcccccccccccCccCCccccCCCc
Confidence            5799999999999999999999999864322  111211  11111    111111110        00  111112334


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       185 ~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .|++|.|+|+++++++++++|+++..+|...++ +.+.++++|||||.|+++++
T Consensus        73 ~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPW-GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCEeccCCccCCC-CcEEEEEECCCCCEEEEecC
Confidence            589999999999999999999999888776665 45778999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=4e-14  Score=113.62  Aligned_cols=117  Identities=25%  Similarity=0.330  Sum_probs=85.3

Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc--cccCCCceeEEEEEeCCH
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--EYDKGNGYAQIAIGTDDV  324 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~--~~~~g~g~~hiaf~V~Dl  324 (376)
                      |+.|.|.|++++.+||+++|||++........ ...+..+...+. ....+.+.......  ....+.+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            78999999999999999999999986543222 233444442211 13455554332221  112345788999999999


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          325 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       325 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      ++++++++++|+++..++.+.++  ++.+|++||+|+.|||++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCC--ceEEEEECCCCCEEEEeC
Confidence            99999999999999988744443  589999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=6e-14  Score=113.30  Aligned_cols=111  Identities=18%  Similarity=0.178  Sum_probs=80.3

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC--C---CCCCCCCceEEEEEe
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--D---KYDIGTGFGHFGIAV  191 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--~---~~~~~~g~~hi~f~V  191 (376)
                      ++.|.|+|++++.+||+++|||++....+      ....+..++.  ...+.+......  +   ....+.+ .|++|.|
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~v   74 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQG-LILNFEV   74 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCC--ceEEEEccCCCCCCcchhcccCCce-EEEEEEE
Confidence            67899999999999999999999875421      1233433322  244444432211  1   1112233 4899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       192 ~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      +|+++++++++++|+++..+|...++ +.+.++++||+|+.|||+|
T Consensus        75 ~did~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          75 DDVDAEYERLKAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CCHHHHHHHHHhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            99999999999999998877776654 5688999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.57  E-value=6.5e-14  Score=113.39  Aligned_cols=114  Identities=27%  Similarity=0.372  Sum_probs=82.5

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCC------CCCCCCCceEEE
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD------KYDIGTGFGHFG  188 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~------~~~~~~g~~hi~  188 (376)
                      |.||+|.|.|++++++||+++|||++..+.   ++  ..+++..++.   ..+.++......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~--~~~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DR--RLAFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CC--ceEEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            579999999999999999999999987641   11  2456666553   234444322110      111235788999


Q ss_pred             EEeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          189 IAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       189 f~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      |.++  |++++++++.++|+++...+. . .++++.+|++||+|+.+|++++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~-~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-W-PRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-C-CCCeeEEEEECCCCCEEEEecC
Confidence            9985  799999999999999876544 2 3356889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.57  E-value=4.1e-14  Score=113.15  Aligned_cols=109  Identities=24%  Similarity=0.400  Sum_probs=78.8

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC--CH
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE--DV  194 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~--d~  194 (376)
                      ||.|.|+|++++++||+++|||++..+.+      ...++..+    ...+.+.......  ..+.+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~------~~~~~~~~----~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS------KEAYFELA----GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC------ceeEEEec----CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            89999999999999999999999875542      23444443    2344444332211  12356789999995  69


Q ss_pred             HHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          195 AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       195 d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      ++++++++++|+++...+... .+.++.+|++||||+.||++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~-~~~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRV-QGEGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCcccc-CCCceEEEEECCCCCEEEEEeC
Confidence            999999999999986443222 2346899999999999999853

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.57  E-value=7.5e-14  Score=111.81  Aligned_cols=107  Identities=20%  Similarity=0.282  Sum_probs=75.4

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE--EEe
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG--IAV  191 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~--f~V  191 (376)
                      +|+||+|.|+|++++++||+ +|||++..+.+      ...+...+..  +..+.+....       ..++.|++  +.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEGD------GLELRTAGND--HRWARLLEGA-------RKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------ceEEEecCCC--ceEEEeecCC-------CCceeeEEEEeEh
Confidence            69999999999999999997 69999865432      2233332322  3344444321       23455544  455


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       192 ~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +|+++++++++++|+++..++  .+ ...+.+||.||+||.|||....
T Consensus        66 ~d~~~~~~~l~~~Gi~~~~~~--~~-~~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          66 DDFAAFARHLEAAGVALAAAP--PG-ADPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhHHHHHHHHHHcCCceecCC--Cc-CCCCEEEEECCCCCEEEEecCC
Confidence            899999999999999987654  22 2345789999999999998543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.57  E-value=8.7e-14  Score=114.71  Aligned_cols=115  Identities=20%  Similarity=0.289  Sum_probs=86.9

Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHH
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  325 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~  325 (376)
                      +|+.|.|.|++++.+||+++||+++......+ +.....++..++  .+..+.+...      ...++..|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~------~~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPG------PERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcC------CCCCCeeEEEEEcCCHH
Confidence            58999999999999999999999987654433 223444555432  2334444331      11568899999999864


Q ss_pred             ---HHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          326 ---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       326 ---~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                         +++++++++|+++..+|...+.+..++++++||+|+.|||.+..
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~  118 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEM  118 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCC
Confidence               68899999999999888766655468899999999999998876

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=7.1e-14  Score=113.31  Aligned_cols=116  Identities=22%  Similarity=0.360  Sum_probs=84.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC---ccccCCCceeEEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV---TEYDKGNGYAQIAIG  320 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~---~~~~~g~g~~hiaf~  320 (376)
                      +++|+.|.|.|++++.+||+++|||+.....+.+  .+..  +..+    ...+++......   .....+.+..|++|.
T Consensus         3 ~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~~~~--~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~hi~~~   74 (125)
T cd07253           3 RIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--GRKA--LRFG----SQKINLHPVGGEFEPAAGSPGPGSDDLCLI   74 (125)
T ss_pred             ccceEEEEecCHHHHHHHHHHHhCceeecccccC--CceE--EEeC----CEEEEEecCCCccCcCccCCCCCCceEEEE
Confidence            5899999999999999999999999987553321  1222  2222    134555432221   112345678999999


Q ss_pred             eCC-HHHHHHHHHHcCCeeecCCccCCC--CCceEEEEECCCCCeEEEEe
Q 017144          321 TDD-VYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       321 V~D-l~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~  367 (376)
                      +++ +++++++++++|+++..+|....+  +..+.+||+||||+.||+++
T Consensus        75 ~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          75 TEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             ecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            975 999999999999999887765432  22478999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=1.3e-13  Score=111.94  Aligned_cols=115  Identities=24%  Similarity=0.262  Sum_probs=83.9

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccc----cCCCceeEEEEEeCC
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY----DKGNGYAQIAIGTDD  323 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~----~~g~g~~hiaf~V~D  323 (376)
                      ..|.|.|++++++||+++||+++......+++......+..+    ...+.+.........    ..+++..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG----DGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC----CEEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            357899999999999999999998665343433333334432    223444332211111    234567899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      +++++++++++|++++.+|...+.+ .+.++++|||||.|+|.+
T Consensus        79 ~d~~~~~l~~~G~~v~~~~~~~~~g-~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERARAAGAEILREPTDTPYG-SREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHHCCCEEeeCccccCCC-cEEEEEECCCCCEEEEec
Confidence            9999999999999999988777765 488999999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.56  E-value=9.1e-14  Score=110.09  Aligned_cols=108  Identities=23%  Similarity=0.273  Sum_probs=77.3

Q ss_pred             EEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHHH
Q 017144          120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD  199 (376)
Q Consensus       120 l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~~~~  199 (376)
                      |.|+|++++++||+++|||++....+      ..+.+..+.....-...+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP------DYVDFSLGFRFHDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET------SEEEEEETEEEEEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC------CeEEEEeccchhhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999987433      22334433210011222332211  12234678899999999999999


Q ss_pred             HHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          200 LVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       200 rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      +++++|+++..+|...++ +.+.+++.|||||.|||+
T Consensus        73 ~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            999999999888888665 578999999999999986

...

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=1.4e-13  Score=110.02  Aligned_cols=109  Identities=21%  Similarity=0.243  Sum_probs=80.4

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHH
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK  196 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~  196 (376)
                      +..|.|+|++++++||+++|||++....+      ...++..+.. .++.+.+......     +....|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDHG------WIATFASPQN-MTVQVSLATEGGT-----ATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcCC------ceEEEeecCC-CCcEEEEecCCCC-----CCCCCEEEEEeCCHHH
Confidence            34689999999999999999999864311      2334443332 2344555433211     2345699999999999


Q ss_pred             HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          197 TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       197 ~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      ++++++++|+++..+|...++ +.+.+|+.||+||.|++.++
T Consensus        71 ~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARAVAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            999999999999887766554 56788999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.56  E-value=7.7e-15  Score=119.33  Aligned_cols=120  Identities=28%  Similarity=0.320  Sum_probs=82.2

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceec--CCCCCeEEEEeecCCCCCceEEEEcccCCCccccC---CCceeEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRD--NPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK---GNGYAQIA  318 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~---g~g~~hia  318 (376)
                      +|+|++|.|.|++++.+||+++|||++.....  .........++..+.  ....+.............   ..+.+|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cceeeeeeccccccccccccccccceeEE
Confidence            37899999999999999999999999997765  222333444444332  223332222211111110   01345666


Q ss_pred             EEe---CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEE
Q 017144          319 IGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  365 (376)
Q Consensus       319 f~V---~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  365 (376)
                      +.+   +|+++++++|++.|+++..+|.+...+...++|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            655   57888999999999999999877776655667899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=4.2e-13  Score=108.97  Aligned_cols=115  Identities=19%  Similarity=0.198  Sum_probs=82.3

Q ss_pred             EEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC----CCCCCCceEEEEEeCC
Q 017144          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFGHFGIAVED  193 (376)
Q Consensus       118 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~----~~~~~g~~hi~f~V~d  193 (376)
                      -.|.|+|++++++||+++|||++......+++....+.+..++.    .+.+........    .....+..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDG----GVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCE----EEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            46899999999999999999999866533333323334554421    233332211111    1133456789999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       194 ~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      +++++++++++|+++..+|...+. +.+.++++|||||.|+|.+
T Consensus        79 ~d~~~~~l~~~G~~v~~~~~~~~~-g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERARAAGAEILREPTDTPY-GSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHHCCCEEeeCccccCC-CcEEEEEECCCCCEEEEec
Confidence            999999999999999988877765 4678899999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK06724 hypothetical protein; Provisional

Probab=99.55  E-value=7.4e-14  Score=114.71  Aligned_cols=112  Identities=19%  Similarity=0.208  Sum_probs=78.0

Q ss_pred             CCccccccccCChhHHHHHHHHhh---CCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAF---GMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  319 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~l---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf  319 (376)
                      ..++|++|.|+|++++.+||+++|   |++.........+              ...+.+....+  ......+..|++|
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g--------------~~~l~l~~~~~--~~~~~~g~~h~af   69 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTG--------------ESEIYFKEVDE--EIVRTLGPRHICY   69 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCC--------------CeeEEEecCCc--cccCCCCceeEEE
Confidence            468999999999999999999966   6665321111111              11222211111  0112346789999


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCccCCC--CCceEEEEECCCCCeEEEEeccc
Q 017144          320 GT---DDVYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       320 ~V---~Dl~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      .|   +|++++.++++++|+++..+|...+.  .+.+.+||+|||||.|||+..+.
T Consensus        70 ~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~~  125 (128)
T PRK06724         70 QAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTPN  125 (128)
T ss_pred             ecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCCC
Confidence            98   78999999999999999888865442  22378899999999999987643

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=1.4e-13  Score=111.83  Aligned_cols=114  Identities=25%  Similarity=0.291  Sum_probs=79.8

Q ss_pred             eEEEEEEeCChhHHHHHHHHh---cCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          115 MLHVVYRVGDLDKTIKFYTEC---LGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~v---LG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      |+||.|.|+|++++++||+++   |||++..+..  +   ..+++..+..  ...+.+......... ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~--~---~~~~~~~~~~--~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG--P---GAVGYGKGGG--GPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC--C---ceeEeccCCC--CceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999998   6998865431  1   1233333222  234444443221111 223457999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEEcCCCCEEEEe
Q 017144          192 ED---VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       192 ~d---~d~~~~rl~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~  236 (376)
                      +|   ++++.+++.++|+.+..+|...+.  ...+.+||+|||||.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            97   778899999999998877766543  3456889999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.55  E-value=8.9e-14  Score=113.40  Aligned_cols=119  Identities=23%  Similarity=0.375  Sum_probs=86.1

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCC-CCCeEEEEeecCCCCCceEEEEcccCCC-cc-----ccCCCceeEE
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP-DYKYTIAVMGYGPEDKNAVLELTYNHGV-TE-----YDKGNGYAQI  317 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~l~l~~~~~~-~~-----~~~g~g~~hi  317 (376)
                      ++|++|.|.|++++.+||+++|||++......+ ......+++..+    +..+++...... ..     ...+++..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997654432 233445566532    355665543221 11     1346788999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCC--CCeEEEEe
Q 017144          318 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD--GWKSVFVD  367 (376)
Q Consensus       318 af~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPd--G~~iel~~  367 (376)
                      +|.|+|+++++++++++|+++..+|...+.+..+++++.||+  |++|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999999999988764444433444555555  99999985

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=7.4e-14  Score=110.85  Aligned_cols=113  Identities=25%  Similarity=0.217  Sum_probs=81.5

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc-ccCCCceeEEEEEeCC
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDKGNGYAQIAIGTDD  323 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~-~~~g~g~~hiaf~V~D  323 (376)
                      |+|++|.|.|++++.+||+++|||++......+.. .  .++..++   ...+++........ ...+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~~-~--~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLFP-G--AWLYAGD---GPQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCCC-c--eEEEeCC---CcEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            57999999999999999999999998754332211 1  2333322   12445543322211 1234577899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEE
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  365 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  365 (376)
                      +++++++++++|+++..++.+.++  .+.+|++||+|+.|||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVPGDG--VRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCCCCC--ccEEEEECCCCCEEeC
Confidence            999999999999999887654222  4789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.55  E-value=9e-14  Score=115.92  Aligned_cols=115  Identities=22%  Similarity=0.289  Sum_probs=84.7

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC-
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~-  322 (376)
                      ++.|+.|.|+|++++.+||+++|||++....    .  ...++..+    +..+.+...........+.+..|++|.++ 
T Consensus         4 ~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v~~   73 (139)
T PRK04101          4 GINHICFSVSNLEKSIEFYEKVLGAKLLVKG----R--KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSIEE   73 (139)
T ss_pred             cEEEEEEEecCHHHHHHHHHhccCCEEEeec----C--eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEecH
Confidence            5889999999999999999999999986431    1  12333322    24444433222111122456789999997 


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 -DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 -Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                       |+++++++++++|+++..+|...+.+ .+.+|++|||||.|||.+..
T Consensus        74 ~dv~~~~~~l~~~G~~i~~~~~~~~~~-~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         74 EDFDHWYQRLKENDVNILPGRERDERD-KKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHHHHHHHHHHHCCceEcCCccccCCC-ceEEEEECCCCCEEEEEeCC
Confidence             99999999999999988777665543 58999999999999998754

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=5.1e-13  Score=108.04  Aligned_cols=115  Identities=22%  Similarity=0.206  Sum_probs=84.6

Q ss_pred             EEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC-C-CCCCCCCceEEEEEeCCHH
Q 017144          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-D-KYDIGTGFGHFGIAVEDVA  195 (376)
Q Consensus       118 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~-~~~~~~g~~hi~f~V~d~d  195 (376)
                      ..|.|.|++++.+||+++|||++......+++......+..++    ..+.+...... . ....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGD----SVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECC----EEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            3588999999999999999999987765444443444455443    23444432111 0 1123356679999999999


Q ss_pred             HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          196 KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       196 ~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      ++++++.+.|+++..+|...+. +.+.++++||+|+.|+|.+
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccc-cceEEEEECCCCCEEEEec
Confidence            9999999999999888766554 6789999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.2e-13  Score=112.33  Aligned_cols=113  Identities=26%  Similarity=0.370  Sum_probs=76.0

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC---C-C-CCCCCCceEEE--E
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---D-K-YDIGTGFGHFG--I  189 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---~-~-~~~~~g~~hi~--f  189 (376)
                      ||+|.|+|++++++||+++|||++.....      ..+.+..++  ....+.+......   . . .....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999864321      112232221  2333433322110   0 0 01123456765  4


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecC---CCCeEEEEEEcCCCCEEEEee
Q 017144          190 AVEDVAKTVDLVKAKGGKVTREPGPVK---GGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       190 ~V~d~d~~~~rl~~~G~~i~~~p~~~~---~~~~~~~~~~DPdG~~iel~~  237 (376)
                      .++|+++++++|+++|+++..+|....   .++.+.+||+|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            567899999999999999987765432   234688999999999999963

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.54  E-value=1.3e-13  Score=111.96  Aligned_cols=120  Identities=19%  Similarity=0.231  Sum_probs=83.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCC-CeEEEEeecCCCCCceEEEEcccCCCcc--ccCCCceeEEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-KYTIAVMGYGPEDKNAVLELTYNHGVTE--YDKGNGYAQIAIG  320 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~l~~~~~~~~--~~~g~g~~hiaf~  320 (376)
                      .+.|+.|.|.|++++++||+++|||+.......++. .....++.......+..++|........  .....+..|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            378999999999999999999999998766543321 1222333322112345666654332211  1223467899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          321 TD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       321 V~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      |+   |+++++++++++|+++..++. ..+  .+.+|++||+|+.|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~-~~~--~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVD-HFG--ERSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEe-ecc--eEEEEEECCCCCEEEeC
Confidence            98   579999999999999875443 322  58899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=3e-13  Score=109.46  Aligned_cols=112  Identities=27%  Similarity=0.415  Sum_probs=79.5

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC--
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED--  193 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d--  193 (376)
                      .|+.|.|+|++++.+||+++||++...+.+    . ...|.. +..  .+.+.+......    ...++.|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~----~-~~~~~~-~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD----D-YAKFLL-EDP--RLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC----C-eeEEEe-cCC--ceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            599999999999999999999998865432    1 223332 222  233334332111    11578899999988  


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecC-CCCeEEEEEEcCCCCEEEEeecC
Q 017144          194 -VAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       194 -~d~~~~rl~~~G~~i~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                       ++++++++.++|+++...|.... .+..+.+|++||+||.|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78889999999999876654332 22357899999999999999743

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.53  E-value=1.5e-13  Score=118.14  Aligned_cols=121  Identities=20%  Similarity=0.158  Sum_probs=85.7

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .+++|+.|.|+|++++++||+++|||++......+.+.....++....  ....+.+...  .  .....+++|++|.|+
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~--~--~~~~~~~~hiaf~v~   78 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSN--KVHDVAYTRD--P--AGARGRLHHLAYALD   78 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCC--CceeEEEecC--C--CCCCCCceEEEEECC
Confidence            458999999999999999999999999876543333323334444322  1223333221  1  112246789999998


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |   +++++++|+++|+++..+|..+......++|++||+|+.|||++..
T Consensus        79 ~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          79 TREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            5   5578899999999988777665543345799999999999999873

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.53  E-value=1.9e-13  Score=116.40  Aligned_cols=117  Identities=15%  Similarity=0.087  Sum_probs=84.1

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc-ccCCCceeEEEEEeC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDKGNGYAQIAIGTD  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~-~~~g~g~~hiaf~V~  322 (376)
                      .++|+.|.|+|++++.+||+++|||++.....   .  .+.+...+. ..+..+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            37899999999999999999999999875432   1  222333221 2246666655322211 122357889999998


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |   +++++++|+++|+++. ++..+++  .+.+||+||||+.|||+...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~-~~~~~~~--~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVS-GIVDRFY--FKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCcc-ccccccc--EEEEEEECCCCcEEEEEECC
Confidence            8   8999999999999854 3333333  47899999999999999865

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.53  E-value=2e-13  Score=114.59  Aligned_cols=114  Identities=16%  Similarity=0.292  Sum_probs=84.8

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      ..+.|+.|.|.|++++.+||+++|||++.....   .  ...++..+..  +..+.+...       ...++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~l~~~~~--~~~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG---D--QMAFLRCNSD--HHSIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC---C--eEEEEECCCC--cceEEEccC-------CCCceEEEEEECC
Confidence            468999999999999999999999999864321   1  2234544322  333444321       2357889999999


Q ss_pred             CHHHHH---HHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          323 DVYKTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       323 Dl~~~~---~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      |++++.   ++|+++|+++..++..+..+..+++||+||+||.|||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            877765   899999999988776554444578999999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=1.2e-13  Score=112.01  Aligned_cols=113  Identities=13%  Similarity=0.191  Sum_probs=79.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcc----cCCCccccCCCceeEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTY----NHGVTEYDKGNGYAQIAI  319 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~----~~~~~~~~~g~g~~hiaf  319 (376)
                      ++.++.|.|.|++++.+||+++||+++....  +.  . ..+ ..     ...+.+..    .........+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~--~~--~-~~~-~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDF--GE--N-VTF-EG-----GFALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeecc--Cc--e-EEE-ec-----cceeccchhhhccCCcccccccCCceEEEE
Confidence            3568899999999999999999999985322  11  1 111 11     11111110    001111223445679999


Q ss_pred             EeCCHHHHHHHHHHcCC-eeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          320 GTDDVYKTAEAIKLSGG-KITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       320 ~V~Dl~~~~~~l~~~G~-~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      .|+|+++++++|+++|+ ++..+|...+++ .+.++|+|||||+|||.+.
T Consensus        71 ~v~dvd~~~~~l~~~g~~~~~~~~~~~~~g-~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKLKRYDNIEYVHPIKEHPWG-QRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHHHhcCCcEEecCcccCCCc-cEEEEEECCCCCEEEEecc
Confidence            99999999999999986 788888777765 5899999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=3.6e-13  Score=110.17  Aligned_cols=117  Identities=23%  Similarity=0.288  Sum_probs=85.0

Q ss_pred             CccccccccCChhHHHHHHHHhh---CCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc---ccCCCceeEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAF---GMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE---YDKGNGYAQI  317 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~l---G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~---~~~g~g~~hi  317 (376)
                      +++|+.+.|.|++++.+||+++|   ||++.....  + ...+...     ..+..+.+........   ...+.+..|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~~~~~~-----~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GRSWRAG-----DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-CceEEec-----CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            47899999999999999999999   999875531  1 1122111     1245666654333211   1345678999


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCccC--CCCCceEEEEECCCCCeEEEEec
Q 017144          318 AIGTD---DVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       318 af~V~---Dl~~~~~~l~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +|.|+   |+++++++++++|+++...+...  .....+.+|++||+|++|||+.+
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            99996   58899999999999999877642  22235889999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.52  E-value=3e-13  Score=110.08  Aligned_cols=115  Identities=21%  Similarity=0.303  Sum_probs=79.7

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccC--------C--CccccCCCce
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH--------G--VTEYDKGNGY  314 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~--------~--~~~~~~g~g~  314 (376)
                      +.|+.|.|.|++++.+||+++|||+......  +..+..  +..+    ...+.+....        .  .......++.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            4689999999999999999999999864322  112221  1111    1122121100        0  0011122345


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          315 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       315 ~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      .|++|.|+|+++++++++++|+++..+|...+.+ .+.++++|||||.|||+++
T Consensus        73 ~~~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARAVEAGAVLVSEPKEKPWG-QTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCEeccCCccCCCC-cEEEEEECCCCCEEEEecC
Confidence            6999999999999999999999998888766665 4788999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.51  E-value=5e-13  Score=106.35  Aligned_cols=109  Identities=28%  Similarity=0.333  Sum_probs=79.6

Q ss_pred             EEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHH
Q 017144          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (376)
Q Consensus       119 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~~~  198 (376)
                      .|.|+|++++++||+++|||++....+  ..  ...++..+    +..+.+......... ...+..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            589999999999999999999876543  11  23445433    234555544322211 2345668999999999999


Q ss_pred             HHHHHcCCe-eecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          199 DLVKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       199 ~rl~~~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      ++++++|++ +..++...++ +.+.++++||+|+.||++|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            999999998 5556555543 5688899999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.51  E-value=2.6e-13  Score=110.10  Aligned_cols=112  Identities=19%  Similarity=0.196  Sum_probs=80.7

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      ..++|+.|.|+|++++.+||+++|||++....+    .  ..++...+......+.+..       ...++..|++|.|+
T Consensus         5 ~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~--~~~l~~~~~~~~~~~~l~~-------~~~~~~~h~af~v~   71 (121)
T cd09013           5 AHLAHVELLTPKPEESLWFFTDVLGLEETGREG----Q--SVYLRAWGDYEHHSLKLTE-------SPEAGLGHIAWRAS   71 (121)
T ss_pred             cEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----C--eEEEEeccCCCccEEEEee-------CCCCceEEEEEEcC
Confidence            468999999999999999999999999875432    1  2334332222234444432       12357899999996


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 ---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                         |++++.++++++|+++...+.....  ++.+||+|||||.|||+-..
T Consensus        72 ~~~~v~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          72 SPEALERRVAALEASGLGIGWIEGDPGH--GKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             CHHHHHHHHHHHHHcCCccccccCCCCC--cceEEEECCCCCEEEEEEec
Confidence               6889999999999987544332222  46789999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.51  E-value=5.1e-13  Score=104.99  Aligned_cols=112  Identities=32%  Similarity=0.426  Sum_probs=85.0

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHH
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK  196 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~  196 (376)
                      |+++.|+|++++.+||+++|||++......  .....+++..+    ...+++...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            899999999999999999999998776532  11244555544    345666664433221235678899999999999


Q ss_pred             HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEE
Q 017144          197 TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (376)
Q Consensus       197 ~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  235 (376)
                      +.++|.++|+.+..++.. ...+.+.+++.||+|+.|+|
T Consensus        75 ~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPRE-EPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcC-CCCCcEEEEEECCCCcEEeC
Confidence            999999999998876652 23467899999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.50  E-value=7.8e-13  Score=106.95  Aligned_cols=114  Identities=25%  Similarity=0.252  Sum_probs=84.0

Q ss_pred             ccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC--ccccCCCceeEEEEEeCCHHH
Q 017144          249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV--TEYDKGNGYAQIAIGTDDVYK  326 (376)
Q Consensus       249 ~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~--~~~~~g~g~~hiaf~V~Dl~~  326 (376)
                      .|.|.|++++.+||+++||+++......+++......+..+    +..+.+......  .....+.+..|++|.|+|+++
T Consensus         6 ~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~~   81 (122)
T cd07246           6 YLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG----DSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVDA   81 (122)
T ss_pred             EEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC----CEEEEEecCCcccCCCCCCCCceEEEEEEeCCHHH
Confidence            47789999999999999999997665444444444444432    234555432111  011234567899999999999


Q ss_pred             HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          327 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       327 ~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      +++++.+.|+++..+|...+++ .+.++++||+|++|+|.+
T Consensus        82 ~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          82 TFARAVAAGATSVMPPADQFWG-DRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHHHCCCeEecCccccccc-ceEEEEECCCCCEEEEec
Confidence            9999999999999888655554 589999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.50  E-value=2.9e-13  Score=111.68  Aligned_cols=114  Identities=23%  Similarity=0.281  Sum_probs=81.0

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC--
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD--  322 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~--  322 (376)
                      |.||.|.|+|++++.+||+++|||++....  +.  .  .++..+    +..+.+.............+..|++|.|+  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~--~~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG--EK--T--AYFTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC--Cc--c--ceEeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            579999999999999999999999986432  11  1  123322    24444433222111112347789999997  


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |+++++++++++|+++..++..... ..+.+||+|||||.|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCc
Confidence            4999999999999998765543332 247899999999999998865

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.50  E-value=2.7e-13  Score=109.85  Aligned_cols=114  Identities=22%  Similarity=0.194  Sum_probs=81.7

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe-
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT-  321 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V-  321 (376)
                      .++.|+.|.|+|++++.+||+++|||++.....    ..  .++..........+.+..       ...++..|++|.| 
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~hi~~~v~   69 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEEFIHHSLVLTK-------APVAGLGHIAFRVR   69 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCCCceEEEEEee-------CCCCceeEEEEECC
Confidence            358899999999999999999999999865421    12  233321111223333322       1235788999998 


Q ss_pred             --CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 --DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 --~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                        +|+++++++++++|+++...|.....+..+.+|+.|||||+|||+...
T Consensus        70 ~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          70 SEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence              578999999999999998765444333347899999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.50  E-value=1.1e-12  Score=120.54  Aligned_cols=223  Identities=18%  Similarity=0.221  Sum_probs=142.7

Q ss_pred             ceeeEEEEEEeCCh-hHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC--CC--CCCCCCceE
Q 017144          112 KRRMLHVVYRVGDL-DKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--DK--YDIGTGFGH  186 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl-~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--~~--~~~~~g~~h  186 (376)
                      ..++.+|.+.|+|. ++..+.+ ..|||+...+--..    ....++.|+    +.+-+......  ..  ..+|++..-
T Consensus        20 ~~GfeFvEf~~~d~~~~l~~l~-~~lGF~~~~~Hrsk----~v~l~rQGd----inlvvn~~~~s~a~~f~~~Hgps~~a   90 (363)
T COG3185          20 TDGFEFVEFAVPDPQEALGALL-GQLGFTAVAKHRSK----AVTLYRQGD----INLVVNAEPDSFAAEFLDKHGPSACA   90 (363)
T ss_pred             CCceeEEEEecCCHHHHHHHHH-HHhCcccccccccc----ceeEEEeCC----EEEEEcCCCcchhhHHHHhcCCchhe
Confidence            56899999999999 5555555 55999876432111    122223231    22222222211  11  137888999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCe-----ecC---CCCeEEEEEEcCCC-CE---EEEeec--CCC--C---CCccc
Q 017144          187 FGIAVEDVAKTVDLVKAKGGKVTREPG-----PVK---GGNTVIAFIEDPDG-YK---FELLER--GPT--P---EPLCQ  247 (376)
Q Consensus       187 i~f~V~d~d~~~~rl~~~G~~i~~~p~-----~~~---~~~~~~~~~~DPdG-~~---iel~~~--~~~--~---~~~~~  247 (376)
                      ++|.|+|...+.++.++.|.+....+.     +++   +-++..+||.|.+| ..   .++...  .+.  .   ..|+|
T Consensus        91 ~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~IDH  170 (363)
T COG3185          91 MAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAIDH  170 (363)
T ss_pred             eEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCCCCcccccccccccccccccccCceeech
Confidence            999999999999999999985543322     111   23567888988884 21   122222  111  1   26899


Q ss_pred             ccccc--CChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc-------ccCCCceeEEE
Q 017144          248 VMLRV--GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-------YDKGNGYAQIA  318 (376)
Q Consensus       248 v~L~v--~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~-------~~~g~g~~hia  318 (376)
                      +++.|  ..++.+..||+++|||+.....+.++..-.+..-.....++...+.|........       ...|.|++|||
T Consensus       171 l~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~GIQHIA  250 (363)
T COG3185         171 LTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGEGIQHIA  250 (363)
T ss_pred             hhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCCcceEEE
Confidence            99987  5899999999999999999877655432222211211222334444443322221       24789999999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCc
Q 017144          319 IGTDDVYKTAEAIKLSGGKITREPG  343 (376)
Q Consensus       319 f~V~Dl~~~~~~l~~~G~~~~~~p~  343 (376)
                      |.++|+.++++++++.|++++..|.
T Consensus       251 ~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         251 FGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             ecccHHHHHHHHHHHcCCccCCCch
Confidence            9999999999999999999998763

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.50  E-value=5.6e-13  Score=107.12  Aligned_cols=120  Identities=28%  Similarity=0.359  Sum_probs=89.5

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      +..+.|..|.+.|++++.+||+++|||+..+..+..+.++  ..+..+....+..+.-.     ....++...+++.|.|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y--~~f~~~~~~~gG~l~~~-----~~~~p~~~~~~iy~~v   79 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRY--AVFPADGAGAGGGLMAR-----PGSPPGGGGWVIYFAV   79 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceE--EEEECCCccccceeccC-----CcCCCCCCCEEEEEec
Confidence            5678899999999999999999999999976644333333  33332221111222111     0122336778999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 ~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +|++++.++++++|++++.++.+.|++ ++++.+.||.||+|.|.+..
T Consensus        80 ~did~~l~rv~~~GG~V~~p~~~~p~~-G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERVVAAGGKVLRPKTEFPGG-GRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHHHhcCCeEEecccccCCc-eEEEEEECCCCCEEEEeecC
Confidence            999999999999999999999888854 58999999999999998754

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.49  E-value=2.4e-13  Score=111.06  Aligned_cols=111  Identities=16%  Similarity=0.172  Sum_probs=80.8

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      ..++|++|.|+|++++.+||+++|||++..+..    .  ..++..+.  .+..+.+...        .++..|++|+|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~----~--~~~l~~~~--~~~~i~l~~~--------~~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERTA----K--ATYFRSDA--RDHTLVYIEG--------DPAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCCC----C--eEEEEcCC--ccEEEEEEeC--------CCceEEEEEEEC
Confidence            358999999999999999999999999864421    1  23454332  2333444321        145679999997


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCC--CCCceEEEEECCCCCeEEEEecc
Q 017144          323 D---VYKTAEAIKLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 D---l~~~~~~l~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |   +++++++++++|+++..++.+..  .+..+++||+|||||.||++.++
T Consensus        69 ~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          69 DDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            5   99999999999999887654211  12246789999999999998765

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=5.6e-13  Score=106.82  Aligned_cols=108  Identities=25%  Similarity=0.326  Sum_probs=78.7

Q ss_pred             EEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC-CCCCCCceEEEEEeCC---
Q 017144          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGIAVED---  193 (376)
Q Consensus       118 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~f~V~d---  193 (376)
                      +.|.|+|++++++||+++|||++....+    .+  +.+..++   ...+.++....... .....+..|++|.|+|   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~~--~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----TF--ALFVLGS---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----ce--EEEEeCC---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            6799999999999999999999765321    12  2233322   23455655433221 1133567899999986   


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       194 ~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      ++++++++.++|+++..+|...+.  ++.++|+|||||.||+.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCC--ccEEEEECCCCCEEEee
Confidence            788899999999999888877654  35789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.49  E-value=5.2e-13  Score=108.79  Aligned_cols=111  Identities=14%  Similarity=0.189  Sum_probs=80.6

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC-
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~-  322 (376)
                      .+.|+.|.|.|++++.+||+++|||++....    +.+....+.  +   +..+.+...      ....+..|++|.|+ 
T Consensus         4 ~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~--~---~~~l~~~~~------~~~~~~~h~a~~v~~   68 (123)
T cd08351           4 TLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAVVKLD--N---GVSLDFAQP------DGEIPPQHYAFLVSE   68 (123)
T ss_pred             eEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEEEEcC--C---CcEEEEecC------CCCCCcceEEEEeCH
Confidence            5789999999999999999999999986421    122222222  1   234444332      11234579999886 


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccC------CCCCceEEEEECCCCCeEEEEecc
Q 017144          323 -DVYKTAEAIKLSGGKITREPGPL------PGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 -Dl~~~~~~l~~~G~~~~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                       |+++++++++++|+++..+|...      ..+.++.+||+|||||.|||++.+
T Consensus        69 ~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          69 EEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             HHHHHHHHHHHHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEecc
Confidence             69999999999999998776543      122358999999999999999864

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.49  E-value=5.3e-13  Score=108.25  Aligned_cols=112  Identities=13%  Similarity=0.126  Sum_probs=81.0

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC-
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~-  322 (376)
                      +++|++|.|+|++++.+||+++|||++....   ...  ..++..++  .+..+.+...       ..++..|++|.|+ 
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~---~~~--~~~~~~~~--~~~~~~l~~~-------~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRP---EDG--ALYLRMDD--RAWRIAVHPG-------EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCC---CCC--eEEEEccC--CceEEEEEeC-------CCCceeEEEEEECC
Confidence            5889999999999999999999999986432   111  22333322  2344544321       1356789999996 


Q ss_pred             --CHHHHHHHHHHcCCeeecCCccC--CCCCceEEEEECCCCCeEEEEecc
Q 017144          323 --DVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 --Dl~~~~~~l~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                        |+++.+++|+++|+++...+.+.  ..+..+++||+|||||.|||+...
T Consensus        68 ~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          68 EAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             HHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence              58999999999999998765322  222247899999999999998654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.48  E-value=8.2e-13  Score=108.97  Aligned_cols=116  Identities=17%  Similarity=0.181  Sum_probs=79.8

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCC--CeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      .+.|+.|.|+|++++++||+++|||++.........  .... ++..+    ...+.+.....    ...++.+|++|.|
T Consensus         4 ~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~-~~~~~----~~~i~l~~~~~----~~~~~~~Hiaf~v   74 (131)
T cd08364           4 GLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEK-FFLIG----GLWIAIMEGDS----LQERTYNHIAFKI   74 (131)
T ss_pred             cEeEEEEEeCCHHHHHHHHHHHhCCeeEEeccccccccccee-EEEcC----CeEEEEecCCC----CCCCCceEEEEEc
Confidence            589999999999999999999999987543221100  0011 11111    23455542111    1234689999999


Q ss_pred             C--CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 D--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 ~--Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +  |++++.++|+++|+++..+ .+...+.++.+||+|||||.|||....
T Consensus        75 ~~~~ld~~~~~l~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          75 SDSDVDEYTERIKALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             CHHHHHHHHHHHHHCCCEEecC-CccccCCceEEEEECCCCCEEEEecCC
Confidence            8  7999999999999987643 222333358999999999999998654

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=7e-13  Score=108.08  Aligned_cols=113  Identities=24%  Similarity=0.241  Sum_probs=77.9

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC-----CCC--CCCCCceEE
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-----DKY--DIGTGFGHF  187 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-----~~~--~~~~g~~hi  187 (376)
                      +.+|.|.|+|++++++||++ |||++......+.    ..++..++   ...+.+......     .+.  ..+.+..|+
T Consensus         1 ~~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l   72 (124)
T cd09012           1 MIFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISD---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLI   72 (124)
T ss_pred             CEEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECC---ceEEEEEcHHHHhhccCCCcccCCCCCeEEE
Confidence            46899999999999999987 8999864322111    22333332   234444432110     000  123345699


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          188 GIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       188 ~f~V~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      +|.|+   |+++++++++++|+++..+|...+  .++.+||+|||||.||++.
T Consensus        73 ~f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~--~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          73 SLSADSREEVDELVEKALAAGGKEFREPQDHG--FMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EEeCCCHHHHHHHHHHHHHCCCcccCCcccCC--ceEEEEEECCCCCEEEEEE
Confidence            99998   488899999999999988776655  3567899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.48  E-value=1.2e-13  Score=112.41  Aligned_cols=123  Identities=31%  Similarity=0.425  Sum_probs=81.1

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCC---------------CCceEEEEcccCCCccc-
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE---------------DKNAVLELTYNHGVTEY-  308 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~l~l~~~~~~~~~-  308 (376)
                      +.|.++++.|+.++..||++++|+.+......++..+.+.++++...               ..+..+||.+++|.... 
T Consensus        23 ~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gtes~~  102 (170)
T KOG2944|consen   23 LQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTESPP  102 (170)
T ss_pred             hhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCCCCc
Confidence            45666666666666666666666665543333332222333322100               12577899988877532 


Q ss_pred             ----cC----CCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          309 ----DK----GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       309 ----~~----g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                          .+    +.|.+||+|.|+|+++++++++++|+++...|.  .|..-.++++.||||++||+....
T Consensus       103 ~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~--dGk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  103 DQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLK--DGKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             chhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCC--CccccceeEEECCCCCeEEEeecC
Confidence                22    248999999999999999999999999776543  222126899999999999998653

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.47  E-value=1.8e-12  Score=104.21  Aligned_cols=122  Identities=27%  Similarity=0.325  Sum_probs=88.5

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      .+...+.|..|.|+|++++++||+++|||++.+..+..+.  ..+.+..+.....=.  +.....   ...+.+...+.|
T Consensus         5 ~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~--~y~~f~~~~~~~gG~--l~~~~~---~~p~~~~~~iy~   77 (127)
T COG3324           5 GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEM--RYAVFPADGAGAGGG--LMARPG---SPPGGGGWVIYF   77 (127)
T ss_pred             ccCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCc--eEEEEECCCccccce--eccCCc---CCCCCCCEEEEE
Confidence            3455799999999999999999999999999776543222  333332222111111  111111   112244556889


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       190 ~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .|+|+++..+|+.++|.+++.++.+.++ .++.+.+.||+||.|.|++..
T Consensus        78 ~v~did~~l~rv~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          78 AVDDIDATLERVVAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             ecCChHHHHHHHHhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            9999999999999999999999999885 688999999999999998753

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.47  E-value=1.1e-12  Score=104.28  Aligned_cols=109  Identities=27%  Similarity=0.360  Sum_probs=79.7

Q ss_pred             ccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHHH
Q 017144          249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTA  328 (376)
Q Consensus       249 ~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~  328 (376)
                      .|.|.|++++.+||+++|||++.....  ...+  .++..+    +..+.+....+.... ...+..|++|.|+|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~~~--~~~~~~----~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EPGY--AFLSRG----GAQLMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CCcE--EEEEeC----CEEEEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            578999999999999999999876542  1222  334422    345555443322111 3456779999999999999


Q ss_pred             HHHHHcCCe-eecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          329 EAIKLSGGK-ITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       329 ~~l~~~G~~-~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      ++++++|++ +..++...+.+ .+.++++||+|+.|||+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWG-MREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcc-cEEEEEECCCCCEEEecC
Confidence            999999999 56666555543 478999999999999976

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.47  E-value=1.5e-12  Score=105.10  Aligned_cols=112  Identities=20%  Similarity=0.181  Sum_probs=78.7

Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc-c---ccCCCceeEEEEEeC
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-E---YDKGNGYAQIAIGTD  322 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~---~~~g~g~~hiaf~V~  322 (376)
                      +..|.|.|++++.+||+++|||++....    ..+.  .+..++  ....+.+....... +   ........|++|.|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~~~--~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   75 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DWYV--SLRSPD--GGVELAFMLPGHETVPAAQYQFQGQGLILNFEVD   75 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----CcEE--EEecCC--CceEEEEccCCCCCCcchhcccCCceEEEEEEEC
Confidence            4578899999999999999999987431    1122  222211  12444443221110 0   111123359999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          323 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       323 Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      |+++++++++++|+++..+|...+.+ .+.++++||+|+.|||+|
T Consensus        76 did~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          76 DVDAEYERLKAEGLPIVLPLRDEPWG-QRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CHHHHHHHHHhcCCCeeeccccCCCc-ceEEEEECCCCCEEEEEC
Confidence            99999999999999998888766654 588999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.47  E-value=1.4e-12  Score=107.74  Aligned_cols=120  Identities=18%  Similarity=0.251  Sum_probs=83.9

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      +++|+.|.|.|++++.+||+++|||++....+.  .  ...++..+. .....+.+.............+..|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            478999999999999999999999998654321  1  233444321 12345555443222111234578899999987


Q ss_pred             HH---HHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecccc
Q 017144          324 VY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  371 (376)
Q Consensus       324 l~---~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  371 (376)
                      ++   +++++++++|+++..++ ..++  .+.+|++||+||.|||+.....
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~-~~~~--~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPV-DHGN--AWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccC-CCCc--eeEEEEECCCCCEEEEEEcCCC
Confidence            65   58899999999987654 2332  4789999999999999977643

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.46  E-value=1.9e-12  Score=104.93  Aligned_cols=108  Identities=21%  Similarity=0.169  Sum_probs=76.3

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHH
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAK  196 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~  196 (376)
                      ...|.|+|++++++||++ |||++..+.+.     ..+++..+    ...+.+.......   ......|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~----~~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRG----DLELHFFAHPDLD---PATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcC----CEEEEEEecCcCC---CCCCcceEEEEeCCHHH
Confidence            357899999999999999 99998754421     12334433    2355665533221   11223578999999999


Q ss_pred             HHHHHHHcCCeee-------cCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          197 TVDLVKAKGGKVT-------REPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       197 ~~~rl~~~G~~i~-------~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      ++++|+++|+++.       .+|...+ .+.+.++|+|||||.|+|.|.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~-~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQP-WGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCC-CceeEEEEECCCCCEEEeecC
Confidence            9999999999743       2333333 367899999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.46  E-value=8e-13  Score=107.25  Aligned_cols=113  Identities=19%  Similarity=0.158  Sum_probs=76.0

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCC-----CCCCCCCCCceEEEE
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG-----VDKYDIGTGFGHFGI  189 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~-----~~~~~~~~g~~hi~f  189 (376)
                      |+||+|.|+|++++++||+. |||++......    ...+.+..+.   ...+.+.....     ........+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999975 99987543221    1122333321   12222222110     000012234567888


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          190 AVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       190 ~V~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      .+.   |+++++++|+++|+++..+|...+. +.+.++|+|||||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEe
Confidence            775   7999999999999998887776665 457889999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.45  E-value=2.3e-13  Score=117.77  Aligned_cols=119  Identities=37%  Similarity=0.700  Sum_probs=104.7

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCC-----------CCeEEEEeecCCCCCceEEEEcccCCCccccC
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----------YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK  310 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~  310 (376)
                      ..+.-|+.+.|.|.+++++||+++|||++.+-.+.++           +++.-.|+++|+++.|.++||+++++...|.-
T Consensus        15 ~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Yel   94 (299)
T KOG2943|consen   15 TRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYEL   94 (299)
T ss_pred             chheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceec
Confidence            3567899999999999999999999999998777665           78899999999999999999999999999999


Q ss_pred             CCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          311 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       311 g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |+++.|+.+.++|+.+.++.++..|.+-         +..-++++.||||+.|+|+++.
T Consensus        95 Gndfg~i~I~s~dv~~~ve~v~~p~~~~---------~g~~~~~v~dPdGykF~l~~~~  144 (299)
T KOG2943|consen   95 GNDFGGITIASDDVFSKVEKVNAPGGKG---------SGCGIAFVKDPDGYKFYLIDRG  144 (299)
T ss_pred             cCCcccEEEeHHHHHHHHHHhcCcCCcc---------cceEEEEEECCCCcEEEEeccC
Confidence            9999999999999999988888776521         1135789999999999999743

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=1.3e-12  Score=106.33  Aligned_cols=115  Identities=24%  Similarity=0.330  Sum_probs=83.4

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc-cccCCCceeEEEEEeC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-EYDKGNGYAQIAIGTD  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~~~~g~g~~hiaf~V~  322 (376)
                      +++|+.|.|.|++++.+||+++|||++....   + .  .+++..++  ....+.+....... ......+..|++|.|+
T Consensus         2 ~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~-~--~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v~   73 (125)
T cd07255           2 RIGAVTLRVADLERSLAFYQDVLGLEVLERT---D-S--TAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILLP   73 (125)
T ss_pred             EEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C-C--EEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEECC
Confidence            4789999999999999999999999997552   1 1  23344322  24556665433221 1233457889999997


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 ---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                         |+++++++++++|+++.. +..++.  .+.+|++|||||+|||....
T Consensus        74 ~~~~v~~~~~~l~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~  120 (125)
T cd07255          74 SRADLAAALRRLIELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADR  120 (125)
T ss_pred             CHHHHHHHHHHHHHcCCceec-cccccc--eeEEEEECCCCCEEEEEEec
Confidence               589999999999998754 333433  47899999999999998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=2.2e-12  Score=103.01  Aligned_cols=108  Identities=20%  Similarity=0.209  Sum_probs=78.6

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHH
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  327 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~  327 (376)
                      ..|.|.|++++.+||+++|||+....    ..  ...++..++ ..+..+.+.....     .+....|++|.|+|++++
T Consensus         4 ~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~~   71 (112)
T cd07238           4 PNLPVADPEAAAAFYADVLGLDVVMD----HG--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDAA   71 (112)
T ss_pred             ceEecCCHHHHHHHHHHhcCceEEEc----CC--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHHH
Confidence            45789999999999999999998532    11  122333222 2234444432211     123456999999999999


Q ss_pred             HHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          328 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       328 ~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +++++++|+++..+|...+++ .+.+|+.||+||.|+|+++
T Consensus        72 ~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          72 LARAVAAGFAIVYGPTDEPWG-VRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHhcCCeEecCCccCCCc-eEEEEEECCCCCEEEEEEc
Confidence            999999999998887766654 4789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.44  E-value=7.1e-13  Score=104.93  Aligned_cols=108  Identities=26%  Similarity=0.365  Sum_probs=76.1

Q ss_pred             cccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHHHH
Q 017144          250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAE  329 (376)
Q Consensus       250 L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~~  329 (376)
                      |.|+|++++++||+++|||++....+    .+.....+.  ........+.....  ......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLGF--RFHDGVIEFLQFPD--PPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEETE--EEEEEEEEEEEEES--SSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEecc--chhhhhHHHccCCc--cccCCCceeEEEEEEcCHHHHHH
Confidence            57899999999999999999987322    233332221  00011222222111  12345688899999999999999


Q ss_pred             HHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          330 AIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       330 ~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      +++++|++++.+|...+++ .+.+++.|||||.|||+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWG-QRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTS-EEEEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCC-eEEEEEECCCCCEEEeC
Confidence            9999999999888876664 58999999999999986

...

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.43  E-value=1.7e-12  Score=104.84  Aligned_cols=112  Identities=24%  Similarity=0.349  Sum_probs=81.2

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe--
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V--  321 (376)
                      .|+|+.|.|+|++++.+||+++|||+......    .+.  ++..+. ...+.+.+..       ...++.+|++|.|  
T Consensus         3 ~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~--~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~v~~   68 (120)
T cd08362           3 ALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIV--YLRATG-SEHHILRLRR-------SDRNRLDVVSFSVAS   68 (120)
T ss_pred             eeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEE--EEECCC-CccEEEEecc-------CCCCCCceEEEEeCC
Confidence            58999999999999999999999999864321    232  333222 1223333321       1224678999999  


Q ss_pred             -CCHHHHHHHHHHcCCeeecCCccCC-CCCceEEEEECCCCCeEEEEecc
Q 017144          322 -DDVYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 -~Dl~~~~~~l~~~G~~~~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                       +|+++++++++++|+++..+|.... .+.++.++|+||+||.|||+...
T Consensus        69 ~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          69 RADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             HHHHHHHHHHHHHcCCceecCCcccCCCCCceEEEEECCCCCEEEEEecc
Confidence             5789999999999999987764332 22357899999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.43  E-value=2e-12  Score=103.26  Aligned_cols=108  Identities=21%  Similarity=0.309  Sum_probs=75.4

Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe--CCH
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--DDV  324 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V--~Dl  324 (376)
                      |+.|.|+|++++.+||+++|||++....+  .  .  .++..+    ...+.+.......  ..+.+..|++|.|  +|+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~--~--~~~~~~----~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K--E--AYFELA----GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c--e--eEEEec----CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            78999999999999999999999864431  1  1  112211    2344443322111  1235678999999  579


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          325 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       325 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      ++++++++++|+++...+...+ ...+.+|++||||+.|||..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~-~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQ-GEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccC-CCceEEEEECCCCCEEEEEe
Confidence            9999999999999875432222 22578999999999999984

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.43  E-value=2.4e-12  Score=103.31  Aligned_cols=111  Identities=23%  Similarity=0.349  Sum_probs=83.1

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC-
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~-  322 (376)
                      +++|+.|.|.|++++.+||+++|||++.....    ..  .++..+. ..+..+.+...       ...+..|++|.|+ 
T Consensus         2 ~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~--~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~~   67 (117)
T cd07240           2 RIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GS--VYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVAS   67 (117)
T ss_pred             ceeEEEEecCCHHHHHHHHHhccCcEEEeecC----Ce--EEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcCC
Confidence            57899999999999999999999999875431    12  2333321 12334444321       1256789999997 


Q ss_pred             --CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 --DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 --Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                        |++++.++++++|+++...+...+++ .+.+|++||+||.+|++...
T Consensus        68 ~~~v~~~~~~l~~~g~~~~~~~~~~~~~-~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          68 EEDLEALAAHLEAAGVAPEEASDPEPGV-GRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             HHHHHHHHHHHHHcCCceEEcCccCCCC-ceEEEEECCCCCEEEEEEcc
Confidence              68999999999999998877644543 47899999999999998654

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.43  E-value=3e-12  Score=103.77  Aligned_cols=107  Identities=21%  Similarity=0.225  Sum_probs=75.4

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHH
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  327 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~  327 (376)
                      ..|.|.|++++++||++ |||++....+.   .  +..+..+    +..+.|......   .......|++|.|+|++++
T Consensus         6 ~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dvd~~   72 (120)
T cd08350           6 PNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRG----DLELHFFAHPDL---DPATSPFGCCLRLPDVAAL   72 (120)
T ss_pred             ceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcC----CEEEEEEecCcC---CCCCCcceEEEEeCCHHHH
Confidence            56889999999999999 99998654321   2  3334422    245555443211   1223346899999999999


Q ss_pred             HHHHHHcCCeee-------cCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          328 AEAIKLSGGKIT-------REPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       328 ~~~l~~~G~~~~-------~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +++|+++|+++.       .++...+++ .+.++++|||||+|+|.|.
T Consensus        73 ~~~l~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          73 HAEFRAAGLPETGSGIPRITPPEDQPWG-MREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHhCccccccCCCcccCCcCCCCc-eeEEEEECCCCCEEEeecC
Confidence            999999999853       233333443 5889999999999999985

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.43  E-value=4e-12  Score=99.82  Aligned_cols=112  Identities=30%  Similarity=0.420  Sum_probs=84.0

Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHH
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK  326 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~  326 (376)
                      |+.+.|.|++++.+||+++||++.......  ......++..+    +..+.+....+......+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            788999999999999999999998766532  12344445532    456666654332211245678999999999999


Q ss_pred             HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEE
Q 017144          327 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  365 (376)
Q Consensus       327 ~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  365 (376)
                      ++++++++|+.+..++. ......+.+++.||+|+.|||
T Consensus        75 ~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPR-EEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCc-CCCCCcEEEEEECCCCcEEeC
Confidence            99999999999887765 222335899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.42  E-value=2.5e-12  Score=103.98  Aligned_cols=114  Identities=24%  Similarity=0.319  Sum_probs=79.0

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc------cccCCCceeEEE
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT------EYDKGNGYAQIA  318 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~------~~~~g~g~~hia  318 (376)
                      +.++.|.|.|++++++||+++|||++...   +++.+  .++..++.   ..+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~--~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRL--AFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCce--EEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            45789999999999999999999998753   22223  33443332   233332211110      111235778999


Q ss_pred             EEe--CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          319 IGT--DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       319 f~V--~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      |.|  +|++++++++.++|+++...+. ... ..+.+|++||+|+.|||+++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~-~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPR-GGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCC-CeeEEEEECCCCCEEEEecC
Confidence            998  5899999999999999876553 222 25789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.42  E-value=5.3e-13  Score=108.68  Aligned_cols=118  Identities=31%  Similarity=0.408  Sum_probs=70.5

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC-----CC----CCCCc
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-----YD----IGTGF  184 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-----~~----~~~g~  184 (376)
                      ++.|+.|.+++.-+..+||..+||+++.+....+..... +|+...    +..+++..+.+...     +.    .+.|+
T Consensus        42 r~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~-v~~~~~----~~~~ELthn~Gtes~~~~~~~ngN~~prGf  116 (170)
T KOG2944|consen   42 RVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVS-VFVFSR----NAKLELTHNWGTESPPDQAYLNGNKEPRGF  116 (170)
T ss_pred             hhccceeechhhhhHhhhHHHhhcccccccCccCCCCCc-eEEecc----cCceeeecCCCCCCCcchhhcCCCCCCCcc
Confidence            344444444444444444444444443332222111111 333322    23566766544322     11    23599


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       185 ~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +||||.|+|+++++.+|++.|++....|.+-  -....+|+.||||++|||...
T Consensus       117 gHIci~V~di~sac~~lkekGV~f~Kk~~dG--k~K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  117 GHICIEVDDINSACERLKEKGVRFKKKLKDG--KMKPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             ceEEEEeCCHHHHHHHHHHhCceeeecCCCc--cccceeEEECCCCCeEEEeec
Confidence            9999999999999999999999976554432  123688999999999999754

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.42  E-value=2.2e-12  Score=105.07  Aligned_cols=112  Identities=22%  Similarity=0.213  Sum_probs=76.5

Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC-----ccc--cCCCceeEEE
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV-----TEY--DKGNGYAQIA  318 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~-----~~~--~~g~g~~hia  318 (376)
                      .++.|.|.|++++++||++ |||++......+.  ......+  +   ...+.+......     ...  ..+.+..|++
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~   73 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AACMVIS--D---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLIS   73 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eEEEEEC--C---ceEEEEEcHHHHhhccCCCcccCCCCCeEEEE
Confidence            4688999999999999976 8999864332222  2221121  1   234444321110     000  1234557999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          319 IGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       319 f~V~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      |.|+   |+++++++++++|+++..+|...++  .+.+||+|||||.|||+-
T Consensus        74 f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          74 LSADSREEVDELVEKALAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EeCCCHHHHHHHHHHHHHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            9997   5889999999999999988776664  467899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.41  E-value=2.5e-12  Score=102.54  Aligned_cols=95  Identities=27%  Similarity=0.336  Sum_probs=77.0

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCC--CCCCCceEEEEEeCC
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY--DIGTGFGHFGIAVED  193 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~--~~~~g~~hi~f~V~d  193 (376)
                      +||+|.|+|++++++||+++||++.......+.......++..++..  ..++|++.......  ..+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999987776666666677777776532  67888886544321  267899999999999


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q 017144          194 VAKTVDLVKAKGGKVTREP  212 (376)
Q Consensus       194 ~d~~~~rl~~~G~~i~~~p  212 (376)
                      ++++.++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999987653

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.41  E-value=4.8e-12  Score=102.79  Aligned_cols=114  Identities=24%  Similarity=0.240  Sum_probs=79.1

Q ss_pred             ccccccccCChhHHHHHHHHh---hCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          245 LCQVMLRVGDLDRAINFYKKA---FGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~---lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      +.|+.|.|.|++++++||+++   ||+++....  .+  .. +.+..+.  ....+.+....+... ....+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~--~~-~~~~~~~--~~~~~~l~~~~~~~~-~~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP--GA-VGYGKGG--GGPDFWVTKPFDGEP-ATAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC--ce-eEeccCC--CCceEEEeccccCCC-CCCCCceEEEEEC
Confidence            579999999999999999999   588875432  11  12 2233221  234455544322111 1223457999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCccCCC--CCceEEEEECCCCCeEEEE
Q 017144          322 DD---VYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFV  366 (376)
Q Consensus       322 ~D---l~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~  366 (376)
                      +|   ++++.++++++|+++..+|...+.  ...+.+|++|||||.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   788999999999999888766553  2235789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.41  E-value=3.7e-12  Score=102.27  Aligned_cols=104  Identities=20%  Similarity=0.241  Sum_probs=72.7

Q ss_pred             EEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHHH
Q 017144          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKT  197 (376)
Q Consensus       118 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~~  197 (376)
                      ..|.|+|++++++||++ |||++..+.+      ..+++..+.    ..+.+...... .   ..+-.+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~----~~l~l~~~~~~-~---~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGN----CAFYLQDYYVK-D---WAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCC----EEEEeecCCCc-c---cccCCEEEEEECCHHHH
Confidence            45889999999999988 9999976542      235565542    23333322111 1   12234789999999999


Q ss_pred             HHHHHHcCCeee-----cCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          198 VDLVKAKGGKVT-----REPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       198 ~~rl~~~G~~i~-----~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      +++|+++|+++.     .+|...+ .+.+.++|+|||||.|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~-~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQP-WWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccC-CCcEEEEEECCCccEEEeeC
Confidence            999999998743     2333333 35789999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.41  E-value=4e-12  Score=101.93  Aligned_cols=108  Identities=22%  Similarity=0.275  Sum_probs=77.4

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      ++.|+.|.|+|++++.+||++ |||++.....  +  .  .++..+.. ....+.+..       ...+++.|++|.|+|
T Consensus         3 ~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~--~--~--~~~~~~~~-~~~~~~~~~-------~~~~~~~~~af~v~~   67 (113)
T cd07267           3 DIAHVRFEHPDLDKAERFLTD-FGLEVAARTD--D--E--LYYRGYGT-DPFVYVARK-------GEKARFVGAAFEAAS   67 (113)
T ss_pred             EEEEEEEccCCHHHHHHHHHH-cCCEEEEecC--C--e--EEEecCCC-ccEEEEccc-------CCcCcccEEEEEECC
Confidence            578999999999999999999 9999865421  1  1  23332211 122222111       123578899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      .++..+.++++|+++...+. .+.+ .+.+||+|||||.|||+-.
T Consensus        68 ~~~~~~~~~~~g~~~~~~~~-~~~~-~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          68 RADLEKAAALPGASVIDDLE-APGG-GKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             HHHHHHHHHcCCCeeecCCC-CCCC-ceEEEEECCCCCEEEEEec
Confidence            99999999999998775432 3433 4789999999999999754

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.41  E-value=4e-12  Score=101.83  Aligned_cols=108  Identities=28%  Similarity=0.344  Sum_probs=77.7

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc-ccCCCceeEEEEEeCC---
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDKGNGYAQIAIGTDD---  323 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~-~~~g~g~~hiaf~V~D---  323 (376)
                      +.|.|.|++++++||+++||+++....    ..+......  +   +..+.+........ .....+.+|++|.|+|   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~~~~~~--~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFALFVLG--S---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceEEEEeC--C---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            568899999999999999999976432    123332221  1   23444443322211 1223467899999975   


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      +++++++++++|+++..+|...+.+  +.++|+|||||.|||.
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g--~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFG--YTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCc--cEEEEECCCCCEEEee
Confidence            8889999999999999888777664  6789999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.41  E-value=3.6e-12  Score=103.46  Aligned_cols=109  Identities=25%  Similarity=0.345  Sum_probs=78.4

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe--
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V--  321 (376)
                      ++.|+.|.|+|++++.+||+++|||++....+  +  .  .++..+    ...+.+.....   ....++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~--~--~~~~~~----~~~~~l~~~~~---~~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K--G--AYLEAG----DLWLCLSVDAN---VGPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C--c--eEEecC----CEEEEEecCCC---CCCCCCeeeEEEEeCH
Confidence            47899999999999999999999999864322  1  1  122222    22333322111   12346778999998  


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 ~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +|+++++++++++|+++..++.. +   .+.+||+|||||.|||+...
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~-~---~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS-E---GDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC-C---ccEEEEECCCCCEEEEEeCC
Confidence            58999999999999998755432 2   36899999999999998654

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.41  E-value=6.1e-12  Score=101.78  Aligned_cols=112  Identities=26%  Similarity=0.331  Sum_probs=78.4

Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC--
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD--  323 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D--  323 (376)
                      .|+.|.|+|++++.+||+++||++.....+  +  +. .+... .  ....+.+......    ..++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~--~~-~~~~~-~--~~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D--YA-KFLLE-D--PRLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C--ee-EEEec-C--CceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            488999999999999999999998865421  1  22 22221 1  1233333321111    11578899999987  


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCC-CCCceEEEEECCCCCeEEEEecc
Q 017144          324 -VYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       324 -l~~~~~~l~~~G~~~~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                       +++.+++++++|+++..++.... ++..+.+|++||+||.|||+..-
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             78899999999999887664332 22247899999999999998753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.40  E-value=3.1e-12  Score=103.75  Aligned_cols=113  Identities=18%  Similarity=0.177  Sum_probs=75.6

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCC-----CccccCCCceeEEEE
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG-----VTEYDKGNGYAQIAI  319 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~-----~~~~~~g~g~~hiaf  319 (376)
                      ++|++|.|.|++++++||++ |||++......  ..+..  +..++   +..+.+.....     ......+.+..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--EPHVE--AVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--CCcEE--EEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57899999999999999975 99987533211  11111  22111   12232221100     000112335568888


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          320 GTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       320 ~V~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      .+.   |+++++++++++|+++..+|...+.+ .+.++++|||||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAELVGAGYPGHKEPWDAPWG-QRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHHHHCCCCcCCCCccCCCC-CEEEEEECCCCCEEEEe
Confidence            764   89999999999999999888777664 47899999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.37  E-value=1.3e-11  Score=99.65  Aligned_cols=110  Identities=25%  Similarity=0.321  Sum_probs=76.4

Q ss_pred             EEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCC------CCCCCCCCCceEEEEEe
Q 017144          118 VVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG------VDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       118 v~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~------~~~~~~~~g~~hi~f~V  191 (376)
                      |.|.|+|++++.+||+++|||++..+.   ..  ...++..+    ...+.+.....      .+....+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            689999999999999999999986551   11  23455543    23455554211      11111222334566655


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          192 ---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       192 ---~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                         +|++++++++++.|+++..+|...++ +++.++++||+||.||+..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence               57999999999999999877766554 5788999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.36  E-value=6.5e-12  Score=102.04  Aligned_cols=113  Identities=18%  Similarity=0.192  Sum_probs=73.2

Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccC-CC--ccc--cCCCceeEEE--E
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH-GV--TEY--DKGNGYAQIA--I  319 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~-~~--~~~--~~g~g~~hia--f  319 (376)
                      |+.|.|+|++++++||+++|||++.....    .+  ..+..++  ....+.+.... ..  ...  ....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~~--~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE----TW--VDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC----Cc--ccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999999854321    11  1122111  11222222111 00  000  1112445665  4


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCC---CCCceEEEEECCCCCeEEEEe
Q 017144          320 GTDDVYKTAEAIKLSGGKITREPGPLP---GINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       320 ~V~Dl~~~~~~l~~~G~~~~~~p~~~~---~~~~~~~~~~DPdG~~iel~~  367 (376)
                      .++|+++++++|+++|+++..+|....   .+..+.+|++|||||.|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            668999999999999999998775321   122488999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.34  E-value=1.8e-11  Score=97.93  Aligned_cols=107  Identities=22%  Similarity=0.224  Sum_probs=73.2

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeE--EEEEe
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQ--IAIGT  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~h--iaf~V  321 (376)
                      .|+|+.|.|.|++++.+||+ .|||++....   +  . ..+...+.  .+..+.+...       ...+..|  +++.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~--~-~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D--G-LELRTAGN--DHRWARLLEG-------ARKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C--c-eEEEecCC--CceEEEeecC-------CCCceeeEEEEeEh
Confidence            58999999999999999997 6999986432   1  1 12222111  2333333321       1223444  45556


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 ~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +|+++++++++++|+++..++.  +.+ .+.+||+||+||.|||....
T Consensus        66 ~d~~~~~~~l~~~Gi~~~~~~~--~~~-~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          66 DDFAAFARHLEAAGVALAAAPP--GAD-PDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhHHHHHHHHHHcCCceecCCC--cCC-CCEEEEECCCCCEEEEecCC
Confidence            8999999999999999886652  221 35789999999999998543

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.31  E-value=4.4e-11  Score=96.42  Aligned_cols=111  Identities=23%  Similarity=0.218  Sum_probs=75.8

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCC------CccccCCCceeEEEEEe
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG------VTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~------~~~~~~g~g~~hiaf~V  321 (376)
                      |.|.|.|++++.+||+++|||++....   +..+  .++..+    +..+.+.....      ......+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---NDGV--AFFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CCce--EEEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            578899999999999999999986541   1122  233321    34455543211      00111222334566654


Q ss_pred             ---CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          322 ---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       322 ---~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                         +|++++++++++.|+++..++...+.+ .+.++++||+||+|||..+
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DP~Gn~iei~~~  121 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWG-GYSGYFADPDGHLWEVAHN  121 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCC-ceEEEEECCCCCEEEEeeC
Confidence               689999999999999998877666543 5889999999999999753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.31  E-value=7.5e-12  Score=99.81  Aligned_cols=95  Identities=23%  Similarity=0.278  Sum_probs=76.6

Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc--ccCCCceeEEEEEeCC
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE--YDKGNGYAQIAIGTDD  323 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~--~~~g~g~~hiaf~V~D  323 (376)
                      +|+.+.|+|++++++||+++||++.......+.....+.++..++.  ...+||.++.+...  ...+.|++|++|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            5899999999999999999999998776666666677777775442  26888887655432  2478899999999999


Q ss_pred             HHHHHHHHHHcCCeeecCC
Q 017144          324 VYKTAEAIKLSGGKITREP  342 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p  342 (376)
                      ++++.++|+++|++++..+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999988653

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.30  E-value=5.4e-11  Score=95.46  Aligned_cols=104  Identities=20%  Similarity=0.156  Sum_probs=71.5

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHH
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  327 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~  327 (376)
                      ..|.|.|++++++||++ |||++....    ..+  .++..+    ...+.+......    ...+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~----~~~--~~l~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN----DNL--AYFRLG----NCAFYLQDYYVK----DWAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC----CCE--EEEEcC----CEEEEeecCCCc----ccccCCEEEEEECCHHHH
Confidence            45789999999999987 999997543    123  334432    233334321111    112345789999999999


Q ss_pred             HHHHHHcCCeeec-----CCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          328 AEAIKLSGGKITR-----EPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       328 ~~~l~~~G~~~~~-----~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      +++|+++|+++.+     ++...+.+ .+.++|+|||||+|+|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g-~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWW-GREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCC-cEEEEEECCCccEEEeeC
Confidence            9999999987543     33333333 589999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.16  E-value=3.3e-10  Score=99.60  Aligned_cols=99  Identities=25%  Similarity=0.386  Sum_probs=73.4

Q ss_pred             eeeEEEEEEeC--ChhHHHHHHHHhcCCEEEEEeecCC--CceEEEEEeeCCCCceEEEEEEecCCC--C-------CCC
Q 017144          113 RRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGV--D-------KYD  179 (376)
Q Consensus       113 ~~i~Hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~l~l~~~~~~--~-------~~~  179 (376)
                      .+|+||++.|+  |++++++||+++|||+.......++  .......+....  ....+++......  .       ...
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~--g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPD--GKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCC--CcEEEEEecCCCCCCccHHHHHHHHh
Confidence            47999999999  9999999999999999887665433  223334444332  2556677654331  1       112


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCe
Q 017144          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  213 (376)
Q Consensus       180 ~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~  213 (376)
                      .+.|+.||||.|+|+++++++|+++|+++...|.
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            4689999999999999999999999999876654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.08  E-value=1.8e-09  Score=83.27  Aligned_cols=116  Identities=28%  Similarity=0.362  Sum_probs=80.4

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC---CC-CCCCceEE--
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK---YD-IGTGFGHF--  187 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~---~~-~~~g~~hi--  187 (376)
                      -+-|.+|.|+|++++++||.++||++.-...        ..|+.++-.++.+.+.+........   .. ++--..|+  
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRst--------d~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRST--------DTWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhccccccccc--------ceEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            4679999999999999999999999864333        2455544444556666655432221   11 11223454  


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCeecC-C--CCeEEEEEEcCCCCEEEEee
Q 017144          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVK-G--GNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       188 ~f~V~d~d~~~~rl~~~G~~i~~~p~~~~-~--~~~~~~~~~DPdG~~iel~~  237 (376)
                      .+.++|.-++.+||+++|+....+|.-.- +  +..+.+++.||.||.+|+-.
T Consensus        76 Vl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          76 VLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             EEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeec
Confidence            46778888999999999998877664432 2  45677889999999999853

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.05  E-value=9.3e-10  Score=96.73  Aligned_cols=98  Identities=26%  Similarity=0.385  Sum_probs=74.4

Q ss_pred             CccccccccC--ChhHHHHHHHHhhCCEEeceecCCC--CCeEEEEeecCCCCCceEEEEcccCCC--c-------cccC
Q 017144          244 PLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPD--YKYTIAVMGYGPEDKNAVLELTYNHGV--T-------EYDK  310 (376)
Q Consensus       244 ~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~l~~~~~~--~-------~~~~  310 (376)
                      .++|+++.|+  |++++++||+++|||+.......++  .......+..+  .....++|..+...  .       ....
T Consensus         3 ~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~--~g~i~l~L~~~~~~~~~s~~~~fl~~~~   80 (191)
T cd07250           3 RIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASP--DGKIRIPLNEPASGKRKSQIQEFLEYYG   80 (191)
T ss_pred             eeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECC--CCcEEEEEecCCCCCCccHHHHHHHHhC
Confidence            5899999999  9999999999999999887654333  23444444432  23567777654431  1       1235


Q ss_pred             CCceeEEEEEeCCHHHHHHHHHHcCCeeecCCc
Q 017144          311 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPG  343 (376)
Q Consensus       311 g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~  343 (376)
                      |+|++|+||.|+|+++++++|+++|++++..|.
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            789999999999999999999999999998773

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=98.90  E-value=8.5e-09  Score=99.45  Aligned_cols=101  Identities=19%  Similarity=0.335  Sum_probs=72.3

Q ss_pred             ccceeeEEEEEEeC--ChhHHHHHHHHhcCCEEEEEeecCCC--ceEEEEEeeCCCCceEEEEEEecCCC--C-------
Q 017144          110 SDKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGV--D-------  176 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~--~-------  176 (376)
                      +...+|+||++.|+  |++++++||+++|||++....+....  ......+....  ....+++......  .       
T Consensus       154 ~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~--g~~~i~L~ep~~~~~~s~i~~fl  231 (353)
T TIGR01263       154 VGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPD--GKVKIPLNEPASGKDKSQIEEFL  231 (353)
T ss_pred             CCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCC--CcEEEEEeccCCCCCCCHHHHHH
Confidence            34678999999999  99999999999999998876553321  11112232211  2456777653111  1       


Q ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 017144          177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (376)
Q Consensus       177 ~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p  212 (376)
                      ....+.|+.||||.|+|+++++++|+++|+++..+|
T Consensus       232 ~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P  267 (353)
T TIGR01263       232 EFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTP  267 (353)
T ss_pred             HHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCC
Confidence            122478999999999999999999999999987665

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.90  E-value=5.1e-09  Score=84.71  Aligned_cols=121  Identities=26%  Similarity=0.417  Sum_probs=73.2

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCce---EEEEEeeCCCCceEEEEE--------EecCCCC-CCCCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRY---TNAFLGYGPEDSHFVVEL--------TYNYGVD-KYDIG  181 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~---~~~~l~~g~~~~~~~l~l--------~~~~~~~-~~~~~  181 (376)
                      +++||.|.|+|++++++||+++||+++..+........   ...+..............        ....... .....
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            68999999999999999999999999987664332211   112221110000000000        0000000 00111


Q ss_pred             -CCceEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          182 -TGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       182 -~g~~hi~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                       .+..|+++.+++   ...........|..+...+. ..+  +..+|++||||+.+|+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence             347799999998   55666677777888755433 222  238999999999999863

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.87  E-value=1.1e-07  Score=74.44  Aligned_cols=113  Identities=25%  Similarity=0.340  Sum_probs=71.3

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHH
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA  195 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d  195 (376)
                      .+-+|+|+|-+..++||++.|||++..+..      ..++++.......+.++-.+............++++.+.|++..
T Consensus         2 ~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~   75 (125)
T PF14506_consen    2 IIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPK   75 (125)
T ss_dssp             EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHH
T ss_pred             cCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHH
Confidence            467899999999999999999999988775      46777765555566777666554444445568999999999977


Q ss_pred             HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          196 KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       196 ~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      ++ +.|.++|.++.   .-..+.+++.+-..+|+|..|.+...
T Consensus        76 EI-e~LLar~~~~~---~l~kg~~gyAfe~vSPEgd~~llhaE  114 (125)
T PF14506_consen   76 EI-EALLARGAQYD---RLYKGKNGYAFEAVSPEGDRFLLHAE  114 (125)
T ss_dssp             HH-HHHHHC-S--S---EEEE-SSSEEEEEE-TT--EEEEE--
T ss_pred             HH-HHHHhcccccc---eeEEcCCceEEEEECCCCCEEEEEEc
Confidence            74 34556665542   33445577888889999999998743

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.87  E-value=1.3e-07  Score=77.56  Aligned_cols=112  Identities=11%  Similarity=0.126  Sum_probs=73.2

Q ss_pred             EEEEe-CChhHHHHHHHHhcCCEEEEEeecC----------CCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceE
Q 017144          118 VVYRV-GDLDKTIKFYTECLGMKLLRKRDIP----------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (376)
Q Consensus       118 v~l~v-~Dl~~a~~FY~~vLG~~~~~~~~~~----------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~h  186 (376)
                      ..|.+ .|.+++++||+++||+++......+          ++....+.+..++.    .+.+......... .+..-.+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~----~l~~~d~~~~~~~-~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQ----RLMASDGGPGFPF-TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCE----EEEEEcCCCCCCC-CCCCCEE
Confidence            34677 8999999999999999998765321          12223444444431    3333332111111 1223446


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          187 FGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       187 i~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      +++.|+|   +++++++|.+.| ++..+|.+.++ +.+..+++||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFW-SPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCc-ccccEEEECCCCCEEEeC
Confidence            8899887   667788876655 88777777765 567889999999999873

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=98.83  E-value=9.6e-08  Score=78.29  Aligned_cols=110  Identities=17%  Similarity=0.128  Sum_probs=72.0

Q ss_pred             ccc-CChhHHHHHHHHhhCCEEeceecC----------CCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEE
Q 017144          250 LRV-GDLDRAINFYKKAFGMELLRKRDN----------PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIA  318 (376)
Q Consensus       250 L~v-~D~~~a~~FY~~~lG~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hia  318 (376)
                      |.+ .|.+++++||+++||+++......          ..+.+....+..+    +..+.+......... .+....+++
T Consensus         5 L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~-~~~~~~~l~   79 (128)
T cd06588           5 LWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF-TFGNGISLS   79 (128)
T ss_pred             EeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC-CCCCCEEEE
Confidence            556 899999999999999999865531          1122233333322    233333322111111 123345788


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          319 IGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       319 f~V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      +.|+|   +++++++|++.| +++.++...+.+ .+..+++||+|+.|+|.
T Consensus        80 i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          80 VECDSEEEADRLFEALSEGG-TVLMPLQKTFWS-PLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EECCCHHHHHHHHHHHhcCC-eEeccchhcCcc-cccEEEECCCCCEEEeC
Confidence            98886   677889987665 888888877765 58899999999999973

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.83  E-value=2.8e-07  Score=75.53  Aligned_cols=117  Identities=20%  Similarity=0.201  Sum_probs=84.3

Q ss_pred             EEEeC-ChhHHHHHHHHhcCCEEEEEeecCC----------CceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCC-ceE
Q 017144          119 VYRVG-DLDKTIKFYTECLGMKLLRKRDIPE----------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FGH  186 (376)
Q Consensus       119 ~l~v~-Dl~~a~~FY~~vLG~~~~~~~~~~~----------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g-~~h  186 (376)
                      .|..+ |.+++++||+++||.++..+...++          +..-.+-+.+++.    .+.+...........+.+ -.-
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~----~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGS----TIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCE----EEEEecCCCccCcccCCCeeEE
Confidence            46778 9999999999999999998887766          4445555665532    232222211111112222 234


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       187 i~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      |.+.++|++++++++.+.|+++..++.+..+ +.+...++||.|+.|.|.....
T Consensus        81 l~~~~~d~da~f~~a~~aGa~v~mpl~~~fw-G~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERAAAAGATVVMPLEDTFW-GDRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHHHhcCCeEEecchhcCc-ccceEEEECCCCCEEEEecCcc
Confidence            6788889999999999999999998888877 5677889999999999986543

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=98.82  E-value=4.6e-08  Score=84.78  Aligned_cols=147  Identities=22%  Similarity=0.305  Sum_probs=84.6

Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC--C----CC------CCCC
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--D----KY------DIGT  182 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--~----~~------~~~~  182 (376)
                      |+|+++.|+|++++.++|++.|||.+.....++.....+..+.+++   . +||+..-.+.  .    ..      ..+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~---~-YlEli~i~~~~~~~~~~~~~~~~~~~~~~   76 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGD---G-YLELIAIDPEAPAPDRGRWFGLDRLAGGE   76 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SS---S-EEEEEEES-HHHSTGGGT-TTTHHHHT--
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCC---c-eEEEEEeCCcccccccccceechhhcCCC
Confidence            6899999999999999998889999998888777555666666654   2 7787763211  1    10      1467


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCC--eEEEEEEcC----CCCEEEEeecCC-C---------CCCcc
Q 017144          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVIAFIEDP----DGYKFELLERGP-T---------PEPLC  246 (376)
Q Consensus       183 g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~--~~~~~~~DP----dG~~iel~~~~~-~---------~~~~~  246 (376)
                      |+.++|+.++|+++..+++++.|+... .+....+..  -+.+++.++    .+..-.+++... .         ...|.
T Consensus        77 g~~~~~l~t~d~~~~~~~l~~~G~~~~-~r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~  155 (175)
T PF13468_consen   77 GLYGWALRTDDIEAVAARLRAAGLDAG-SRVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGIT  155 (175)
T ss_dssp             EEEEEEEE-S-HHHHHHHHHTTT-EEE-EEEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHHhcCCCCC-CcCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEE
Confidence            899999999999999999999997621 112222111  123344553    234445553222 1         13589


Q ss_pred             ccccccCChhHHHHHHHHhh
Q 017144          247 QVMLRVGDLDRAINFYKKAF  266 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~l  266 (376)
                      ++.+.++|++++.++|.++|
T Consensus       156 ~v~i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  156 RVVIAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEEEEETTHHHHHHHHHHH-
T ss_pred             EEEEEeCCHHHHHHHHHhhC
Confidence            99999999999999999875

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.82  E-value=4e-08  Score=77.28  Aligned_cols=117  Identities=24%  Similarity=0.297  Sum_probs=76.6

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCC-------CCCCceE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD-------IGTGFGH  186 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~-------~~~g~~h  186 (376)
                      ++..|.|.|.|++++.+||+. |||+.........   ....+-.+    .+.+.|.....-..+.       ..+.-.-
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~~----ni~vMLL~~~~fq~F~~~~i~dt~~s~evl   74 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIISD----NIFVMLLEEARFQTFTKRQIADTTKSREVL   74 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEec----cEEEEEeccHHhhhhcccccccccCCceEE
Confidence            577899999999999999988 9999865432211   22222222    2233333321111000       1122334


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          187 FGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       187 i~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      +++.+.+   +|++.++..++|+++..+|.+..  ..+..-|.||||+.||++.-.+
T Consensus        75 i~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~g--fMYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          75 ISLSAGSREEVDELVDKALEAGGKPANEPQDEG--FMYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             EEeccCcHHHHHHHHHHHHHcCCCCCCCccccc--cccceeeeCCCCCeEEEEEeCH
Confidence            7788775   88899999999999977776654  5677779999999999986543

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.77  E-value=2.9e-07  Score=75.42  Aligned_cols=115  Identities=18%  Similarity=0.172  Sum_probs=82.8

Q ss_pred             cccC-ChhHHHHHHHHhhCCEEeceecCCC----------CCeEEEEeecCCCCCceEEEEcccCCCccccCCC-ceeEE
Q 017144          250 LRVG-DLDRAINFYKKAFGMELLRKRDNPD----------YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGN-GYAQI  317 (376)
Q Consensus       250 L~v~-D~~~a~~FY~~~lG~~~~~~~~~~~----------~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~-g~~hi  317 (376)
                      |... |.++|++||+++||.+...+....+          +....+-+..+    +..+.+....+......++ --.-+
T Consensus         6 l~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~l   81 (136)
T COG2764           6 LFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLSL   81 (136)
T ss_pred             EEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEEE
Confidence            4566 9999999999999999987776555          34444444432    2333333222221122222 33567


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          318 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       318 af~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      .+.++|+++..+++.+.|+++..++.+...+ .++..++||.|+.|.|....
T Consensus        82 ~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG-~r~G~v~D~fGv~W~l~~~~  132 (136)
T COG2764          82 DLYVEDVDAVFERAAAAGATVVMPLEDTFWG-DRYGQVTDPFGVVWMLNTPV  132 (136)
T ss_pred             EEEehHHHHHHHHHHhcCCeEEecchhcCcc-cceEEEECCCCCEEEEecCc
Confidence            8888899999999999999999999888776 58999999999999997765

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.70  E-value=1.3e-07  Score=72.99  Aligned_cols=117  Identities=20%  Similarity=0.223  Sum_probs=75.5

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc---cc-cCC--CceeEEE
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT---EY-DKG--NGYAQIA  318 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~---~~-~~g--~g~~hia  318 (376)
                      +-|+.+.|.|++++++||.++||.+.-++.+.   ....-+++.     +.++-+....+..   .. ..+  ...--+.
T Consensus         5 ~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd~---wvdfDfyGH-----Q~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvV   76 (138)
T COG3565           5 PFHLAIPVNDLDETRRFYGEVLGCKEGRSTDT---WVDFDFYGH-----QVVAHLTPQPDSQGSGKVDGHGVPPPHFGVV   76 (138)
T ss_pred             ceEEeeeccccHHHHhhhhhhcccccccccce---EEEeeeccc-----EEEEEecCCcccccCcccCCCCCCCccceEE
Confidence            45888999999999999999999998665321   112222221     2222222211110   01 111  1223456


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCccC---CCCCceEEEEECCCCCeEEEEecc
Q 017144          319 IGTDDVYKTAEAIKLSGGKITREPGPL---PGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       319 f~V~Dl~~~~~~l~~~G~~~~~~p~~~---~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +.++|..+..++|+++|+.+..+|.-.   ..+.++..++.||.||.+|+-.--
T Consensus        77 l~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR  130 (138)
T COG3565          77 LPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFR  130 (138)
T ss_pred             EEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeeccc
Confidence            678999999999999999988777522   123358899999999999996544

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.65  E-value=6.7e-08  Score=78.00  Aligned_cols=121  Identities=21%  Similarity=0.269  Sum_probs=74.2

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCC---eEEEEeecCCC--CCceEE------EEcccCCCc-cccCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK---YTIAVMGYGPE--DKNAVL------ELTYNHGVT-EYDKG  311 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~---~~~~~l~~~~~--~~~~~l------~l~~~~~~~-~~~~g  311 (376)
                      .+.|+.|.|+|++++.+||+++||+++..........   ....+......  ......      ......... ....+
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            4789999999999999999999999998765433221   11111111100  000000      000000000 01111


Q ss_pred             -CceeEEEEEeCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          312 -NGYAQIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       312 -~g~~hiaf~V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                       .+..|+++.+++   ...........|..+..... ...+  ..+|++||||+.||+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~--~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGG--VHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcc--eEEEEECCCCcEEEeeC
Confidence             347899999998   67777888888888765443 2222  38999999999999974

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.63  E-value=3.7e-07  Score=71.88  Aligned_cols=113  Identities=21%  Similarity=0.230  Sum_probs=74.1

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccC---C----CccccCCCceeEE
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH---G----VTEYDKGNGYAQI  317 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~---~----~~~~~~g~g~~hi  317 (376)
                      ..+|.|.|.|++++.+||+ .|||+..+...+...  ......     ....+.|..+.   .    .........-..+
T Consensus         4 mIFvNLPVkDL~~S~~Fy~-alGfk~Npq~sde~a--~~mi~~-----~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           4 MIFVNLPVKDLEASKAFYT-ALGFKFNPQFSDEDA--ACMIIS-----DNIFVMLLEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             EEEEecchhhHHHHHHHHH-HhCcccCCCcccccc--eeEEEe-----ccEEEEEeccHHhhhhcccccccccCCceEEE
Confidence            3468899999999999995 599998765543322  111111     12233332211   0    0011233444678


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          318 AIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       318 af~V~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      ++.+.   ++++.+++..++|++...++.++..  -+..-|.|||||.||++-
T Consensus        76 ~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~  126 (133)
T COG3607          76 SLSAGSREEVDELVDKALEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             EeccCcHHHHHHHHHHHHHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEE
Confidence            88885   6899999999999999777766554  355689999999999963

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.63  E-value=1.7e-07  Score=90.34  Aligned_cols=99  Identities=18%  Similarity=0.244  Sum_probs=72.5

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC-----ceEEEEEeeCCCCceEEEEEEecCCC--C--------
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-----RYTNAFLGYGPEDSHFVVELTYNYGV--D--------  176 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~g~~~~~~~l~l~~~~~~--~--------  176 (376)
                      ..+|+||++.|++++.+..||+++|||+.....+.++.     ......+..+..  ...++|..+...  .        
T Consensus       178 l~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g--~v~ipLnEP~~~~~~~SqI~eFL  255 (398)
T PLN02875        178 LRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNE--MVLLPLNEPTFGTKRKSQIQTYL  255 (398)
T ss_pred             cceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCC--cEEEEeccCCCCCCCcChHHHHH
Confidence            56899999999999999999999999998765443221     123444544332  456666664321  1        


Q ss_pred             CCCCCCCceEEEEEeCCHHHHHHHHHHc----CCeeecCC
Q 017144          177 KYDIGTGFGHFGIAVEDVAKTVDLVKAK----GGKVTREP  212 (376)
Q Consensus       177 ~~~~~~g~~hi~f~V~d~d~~~~rl~~~----G~~i~~~p  212 (376)
                      ....|.|++||||.++|+.++.++|+++    |++....|
T Consensus       256 ~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        256 EHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            1224689999999999999999999998    99887643

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.47  E-value=1e-06  Score=82.31  Aligned_cols=106  Identities=18%  Similarity=0.232  Sum_probs=70.8

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      -+.-||.|.|.|++++++||+++||+.. .    .++  ..+.+  + +  .+..-+....+.    ....-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-F----sde--~a~cm--~-d--tI~vMllt~~D~----~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-W----DGD--KLFLL--G-K--TSLYLQQTKAEK----KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-C----CCC--ccccc--c-C--cEEEEEecCCCC----CCcceEEEEeccC
Confidence            3688999999999999999999988863 2    111  11212  2 2  222222222211    1123345788888


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       193 d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +   +|++.++..++|++...+|.+++.    .--|.||||+.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEEE
Confidence            6   888899999999987667776654    33489999999999854

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.27  E-value=1.1e-06  Score=79.84  Aligned_cols=130  Identities=15%  Similarity=0.166  Sum_probs=88.0

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccC--CCc-----cccCCCcee
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH--GVT-----EYDKGNGYA  315 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~--~~~-----~~~~g~g~~  315 (376)
                      .+++|+.+.|+|...++.||+..|||++......+.+...+.......  +..+..+...+  +.+     ...+|.+..
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~--g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQ--GKIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhc--CCEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            358999999999999999999999999987653332211111111111  11222222211  111     124677888


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeeecCCccCCC--CCceEEEEECCCCCeEEEEeccccccc
Q 017144          316 QIAIGTDDVYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVDNLDFLKE  374 (376)
Q Consensus       316 hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~~~~~~  374 (376)
                      -+||+|+|.+++.+.+.++|.++..+|.....  |..+++.+..+.-...-|+++..++.+
T Consensus        94 dvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~  154 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGP  154 (381)
T ss_pred             ceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhcccccc
Confidence            99999999999999999999999998875432  334778888887777777777665554

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.15  E-value=1.2e-05  Score=75.22  Aligned_cols=105  Identities=25%  Similarity=0.366  Sum_probs=71.4

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      ....||.|.|.|++++.+||+++|++..   ..++.  . . .++    +....+-+.+.     -.....-.-+++.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~---Fsde~--a-~-cm~----dtI~vMllt~~-----D~~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC---WDGDK--L-F-LLG----KTSLYLQQTKA-----EKKNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC---CCCCc--c-c-ccc----CcEEEEEecCC-----CCCCcceEEEEeccC
Confidence            4567999999999999999999988874   11111  1 1 111    11222323322     112234456888886


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          323 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       323 ---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                         ++|+.+++..++|++...++.++..    .--|.|||||.||++-
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEE
Confidence               5889999999999987666666554    3479999999999974

>PRK10148 hypothetical protein; Provisional

Probab=98.07  E-value=0.00033  Score=58.80  Aligned_cols=116  Identities=15%  Similarity=0.116  Sum_probs=73.8

Q ss_pred             EEEEeC-ChhHHHHHHHHhcCCEEEEEeec--------------------CCCceEEEEEeeCCCCceEEEEEEecCCCC
Q 017144          118 VVYRVG-DLDKTIKFYTECLGMKLLRKRDI--------------------PEDRYTNAFLGYGPEDSHFVVELTYNYGVD  176 (376)
Q Consensus       118 v~l~v~-Dl~~a~~FY~~vLG~~~~~~~~~--------------------~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~  176 (376)
                      ..|..+ |.+++.+||+++||.++......                    +++....+-+.+++.    .+.+...  ..
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~----~lm~sD~--~~   78 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGS----DIMMSDA--IP   78 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCE----EEEEECC--CC
Confidence            345664 89999999999999988654321                    112333455555431    2222221  11


Q ss_pred             CCCCCCCceEEEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          177 KYDIGTGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       177 ~~~~~~g~~hi~f~V~d~d~---~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      .......-.++++.++|.++   ++++| +.|+++..++.+..+ +.+...++||.|+.|.|......
T Consensus        79 ~~~~~~~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~~~~  144 (147)
T PRK10148         79 SGKAHYSGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVVKQQ  144 (147)
T ss_pred             CcCCCCCeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcch-hhccEEEECCCCCEEEEEecCCC
Confidence            11111123467788888776   45555 689999888888776 56778899999999999876543

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=97.97  E-value=1.9e-05  Score=73.36  Aligned_cols=100  Identities=20%  Similarity=0.256  Sum_probs=70.3

Q ss_pred             eeeEEEEEEeC--ChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEe-eCCCCceEEEEEEecCCCCC-------CCCCC
Q 017144          113 RRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLG-YGPEDSHFVVELTYNYGVDK-------YDIGT  182 (376)
Q Consensus       113 ~~i~Hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~~~~~l~l~~~~~~~~-------~~~~~  182 (376)
                      ..|+|++..|.  .++....||+++|||+.....+.++.. +.++-+ .-+....+.+.+.......+       .-.|.
T Consensus       166 ~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~-tgl~Sram~Sp~G~vrlplN~s~~~~sqi~efl~~y~G~  244 (363)
T COG3185         166 TAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPI-TGLRSRAMVSPCGKVRLPLNESADDKSQIGEFLREYRGE  244 (363)
T ss_pred             eeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCc-ccEEEeeEecCCCcEEeecccCCCchhHHHHHHHHhCCC
Confidence            58999999885  799999999999999998877665532 111111 11111234454444332222       11678


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCe
Q 017144          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  213 (376)
Q Consensus       183 g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~  213 (376)
                      |+.||+|.++|+-++.++++++|++....|.
T Consensus       245 GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         245 GIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             cceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            9999999999999999999999999876553

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.95  E-value=8.7e-05  Score=61.18  Aligned_cols=121  Identities=18%  Similarity=0.209  Sum_probs=77.9

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC----CCCCCCceE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFGH  186 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~----~~~~~g~~h  186 (376)
                      ...++.||.+.++|.++...+++ .|||+.+.+-..    .....++.|.  ..+.++-  .+....    ..+|+++.-
T Consensus         6 g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrs----k~v~l~rQG~--I~~vln~--ep~s~a~~~~~~HG~sv~a   76 (139)
T PF14696_consen    6 GLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRS----KDVTLYRQGD--INFVLNS--EPDSFAAEFAAQHGPSVCA   76 (139)
T ss_dssp             -EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECC----CSEEEEEETT--EEEEEEE--ESTSCHHHHHHHHSSEEEE
T ss_pred             CCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCC----cceEEEEeCC--EEEEEeC--CCcchHHHHHHhcCCEEEE
Confidence            34689999999999888888886 499998765321    1233444442  2444433  222211    126889999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCC
Q 017144          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (376)
Q Consensus       187 i~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  242 (376)
                      ++|.|+|.++++++..++|.+....|...  +.-...-++.++|..+.|++.....
T Consensus        77 iafrV~Da~~A~~rA~~~GA~~~~~~~~~--~e~~~paI~g~G~sl~yfVdr~~~~  130 (139)
T PF14696_consen   77 IAFRVDDAAAAYERAVALGAEPVQEPTGP--GELNIPAIRGIGGSLHYFVDRYGDK  130 (139)
T ss_dssp             EEEEES-HHHHHHHHHHTT--EEEEEEET--T-BEEEEEE-CCC-EEEEEE--SSS
T ss_pred             EEEEeCCHHHHHHHHHHcCCcCcccCCCC--CcEeeeeEEccCCCEEEEEecCCCC
Confidence            99999999999999999999887655332  3455667899999999999876543

>PRK10148 hypothetical protein; Provisional

Probab=97.80  E-value=0.0006  Score=57.19  Aligned_cols=111  Identities=19%  Similarity=0.137  Sum_probs=69.9

Q ss_pred             ccc-CChhHHHHHHHHhhCCEEeceec---C-----------------CCCCeEEEEeecCCCCCceEEEEcccCCCccc
Q 017144          250 LRV-GDLDRAINFYKKAFGMELLRKRD---N-----------------PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY  308 (376)
Q Consensus       250 L~v-~D~~~a~~FY~~~lG~~~~~~~~---~-----------------~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~  308 (376)
                      |.. .+.++|++||+++||-++.....   .                 +++.+....+..+    +..+.+...... ..
T Consensus         7 L~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm~sD~~~~-~~   81 (147)
T PRK10148          7 LSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIMMSDAIPS-GK   81 (147)
T ss_pred             EEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEEEECCCCC-cC
Confidence            445 48999999999999988764421   1                 1122333333332    122322211111 01


Q ss_pred             cCCCceeEEEEEeCCHHH---HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          309 DKGNGYAQIAIGTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       309 ~~g~g~~hiaf~V~Dl~~---~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      ..+. -.++.+.++|.++   +.++| +.|++++.++...+.+ .++..++||-|+.|.|...
T Consensus        82 ~~~~-~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg-~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         82 AHYS-GFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWA-HGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             CCCC-eEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchh-hccEEEECCCCCEEEEEec
Confidence            1122 3477888888776   55666 5889999998887765 4889999999999999764

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=97.71  E-value=0.00044  Score=54.49  Aligned_cols=112  Identities=25%  Similarity=0.369  Sum_probs=61.9

Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc--cccCCCceeEEEEEeCCH
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--EYDKGNGYAQIAIGTDDV  324 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~--~~~~g~g~~hiaf~V~Dl  324 (376)
                      +-.|+|.|-+..++||++.|||++..+.      -.+++++..  .+...+.|-+.++..  ...+..-++++.+.|++.
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EE------na~a~lg~~--~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~   74 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEE------NALAILGDQ--QKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNP   74 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEE------TTEEEEE-T--T--EEEEEEE--TTT-B--SSS-SEEEEEEEESSH
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeecc------ccEEEecCC--CCceEEEEecCCccccccccCcceeeEEEEEcCCH
Confidence            4568999999999999999999998653      134556643  334444444433221  223345788999999884


Q ss_pred             HHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          325 YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       325 ~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                       ..++.|.++|.++..-   .-+-+++.+-..+|.|..|.|....+
T Consensus        75 -~EIe~LLar~~~~~~l---~kg~~gyAfe~vSPEgd~~llhaEdd  116 (125)
T PF14506_consen   75 -KEIEALLARGAQYDRL---YKGKNGYAFEAVSPEGDRFLLHAEDD  116 (125)
T ss_dssp             -HHHHHHHHC-S--SEE---EE-SSSEEEEEE-TT--EEEEE--S-
T ss_pred             -HHHHHHHhccccccee---EEcCCceEEEEECCCCCEEEEEEcCC
Confidence             4456666677653221   11223466778899999999987664

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.39  E-value=0.00034  Score=60.49  Aligned_cols=87  Identities=23%  Similarity=0.389  Sum_probs=51.6

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCC--eEEEEeecCCCCCceEEEEcccCCCcc------------ccC
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK--YTIAVMGYGPEDKNAVLELTYNHGVTE------------YDK  310 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~l~~~~~~~~------------~~~  310 (376)
                      |+|+.+.|+|++++.++|++.+||++......+..+  ..++.++      ...|||....+...            ...
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~------~~YlEli~i~~~~~~~~~~~~~~~~~~~~   74 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG------DGYLELIAIDPEAPAPDRGRWFGLDRLAG   74 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S------SSEEEEEEES-HHHSTGGGT-TTTHHHHT
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC------CceEEEEEeCCcccccccccceechhhcC
Confidence            689999999999999999999999998776665433  3455554      23777765221111            124


Q ss_pred             CCceeEEEEEeCCHHHHHHHHHHcCCe
Q 017144          311 GNGYAQIAIGTDDVYKTAEAIKLSGGK  337 (376)
Q Consensus       311 g~g~~hiaf~V~Dl~~~~~~l~~~G~~  337 (376)
                      +.|+.++++.++|+++..+++++.|++
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHHHTTT-E
T ss_pred             CCCeEEEEEecCCHHHHHHHHHhcCCC
Confidence            679999999999999999999999976

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=97.38  E-value=0.0013  Score=54.32  Aligned_cols=116  Identities=21%  Similarity=0.212  Sum_probs=75.4

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc--c--ccCCCceeEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--E--YDKGNGYAQIAI  319 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~--~--~~~g~g~~hiaf  319 (376)
                      .+++|.+.+++.+++..++ +.|||+...+..  +....+  +..|    ...+.+.......  .  ..+|++..-++|
T Consensus         9 G~dFvEFa~~~~~~l~~~~-~~lGF~~~a~hr--sk~v~l--~rQG----~I~~vln~ep~s~a~~~~~~HG~sv~aiaf   79 (139)
T PF14696_consen    9 GFDFVEFAVPDAQALAQLF-TALGFQPVARHR--SKDVTL--YRQG----DINFVLNSEPDSFAAEFAAQHGPSVCAIAF   79 (139)
T ss_dssp             EEEEEEEE-SSTTSCHHHH-CCCCEEEECCEC--CCSEEE--EEET----TEEEEEEEESTSCHHHHHHHHSSEEEEEEE
T ss_pred             CeEEEEEecCCHHHHHHHH-HHhCcceEEecC--CcceEE--EEeC----CEEEEEeCCCcchHHHHHHhcCCEEEEEEE
Confidence            4778889999987777777 579999987642  322333  3322    3444443322111  1  146899999999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          320 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       320 ~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      .|+|..++++++.++|.+.+.+|...  +...+.-++-++|.++-|+++.+
T Consensus        80 rV~Da~~A~~rA~~~GA~~~~~~~~~--~e~~~paI~g~G~sl~yfVdr~~  128 (139)
T PF14696_consen   80 RVDDAAAAYERAVALGAEPVQEPTGP--GELNIPAIRGIGGSLHYFVDRYG  128 (139)
T ss_dssp             EES-HHHHHHHHHHTT--EEEEEEET--T-BEEEEEE-CCC-EEEEEE--S
T ss_pred             EeCCHHHHHHHHHHcCCcCcccCCCC--CcEeeeeEEccCCCEEEEEecCC
Confidence            99999999999999999988765322  22477889999999999999863

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.20  E-value=0.26  Score=39.39  Aligned_cols=96  Identities=19%  Similarity=0.342  Sum_probs=52.5

Q ss_pred             CChhHHHHHHHHhcCC-EEEEEeecCC------CceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHH
Q 017144          123 GDLDKTIKFYTECLGM-KLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA  195 (376)
Q Consensus       123 ~Dl~~a~~FY~~vLG~-~~~~~~~~~~------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d  195 (376)
                      .+.++|.+||+++||- ++......++      +....+.+..++    ..+......  +....+++ ..+++.++|.+
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g----~~lm~~D~~--~~~~~~~~-~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGG----QKLMASDGG--PDFPFGNN-ISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETT----EEEEEEEES--TS----TT-EEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECC----eEEEEECCC--CCCCCCCc-EEEEEEcCCHH
Confidence            6899999999999995 3333333222      122234444432    122222222  23333344 45888888855


Q ss_pred             ---HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          196 ---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       196 ---~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                         +++++|.+-|-          +.. .+-.+.|.-|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~----------~~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ----------WFS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE----------TCC-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC----------ccc-eeEEEEeCCCCEEEeC
Confidence               55667766653          223 6778999999999885

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.54  E-value=0.02  Score=44.19  Aligned_cols=92  Identities=17%  Similarity=0.209  Sum_probs=42.6

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC--
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD--  322 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~--  322 (376)
                      +..+.|+|+| +++..||+++||-+..         ..+.+....+++-      .-     +.+.-=++-.+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea~G~DL------~~-----~~~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEAQGPDL------TI-----ENNETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TTEEEEE---CCG------SS------TTSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeeccCCcc------cc-----CCCcEEeeEEEEEEecCc
Confidence            4568899999 8899999999873221         1122222111100      00     0011126678899998  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEE
Q 017144          323 -DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  365 (376)
Q Consensus       323 -Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  365 (376)
                       |+.++.+++.+.++  .-++      ..++..+.||+|..|+|
T Consensus        65 ~Dl~~L~~~le~~~~--fidK------k~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FDLAALKSHLEEQEF--FIDK------KEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             --HHHHHHHTTTS-E--E--T------T-SEEEEE-TTS-EEEE
T ss_pred             ccHHHHHHHhcccce--EecC------CceEEEEECCcceEEEe
Confidence             67777888877432  2222      25899999999999887

>PF15067 FAM124: FAM124 family

Probab=94.90  E-value=0.21  Score=44.32  Aligned_cols=105  Identities=19%  Similarity=0.237  Sum_probs=62.0

Q ss_pred             eeEEEEEEeC--ChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCC-CCCCceEEEEE
Q 017144          114 RMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYD-IGTGFGHFGIA  190 (376)
Q Consensus       114 ~i~Hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~-~~~g~~hi~f~  190 (376)
                      .+--++|.|+  |.+.+++||+-+|+-+...+..  +   --+|.-+...  .+.+.+.-..-..... ...--.-+.|.
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~--~---FC~F~lys~~--~~~iQlsLK~lp~~~~p~p~esavLqF~  200 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKE--D---FCFFTLYSQP--GLDIQLSLKQLPPGMSPEPTESAVLQFR  200 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC--C---cEEEEEecCC--CeEEEEEeccCCCCCCcccccceEEEEE
Confidence            6778899999  9999999999999988765443  1   2233333333  3444444422111111 11222347899


Q ss_pred             eCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEE
Q 017144          191 VEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (376)
Q Consensus       191 V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  235 (376)
                      |.|+.++.--|=.--.+|.         .++ --..|||||.|-|
T Consensus       201 V~~igqLvpLLPnpc~PIS---------~~r-WqT~D~DGNkILL  235 (236)
T PF15067_consen  201 VEDIGQLVPLLPNPCSPIS---------ETR-WQTEDYDGNKILL  235 (236)
T ss_pred             ecchhhhcccCCCCccccc---------CCc-ceeeCCCCCEecc
Confidence            9999987654422222221         111 2368999999854

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=94.38  E-value=0.067  Score=41.29  Aligned_cols=90  Identities=18%  Similarity=0.265  Sum_probs=42.5

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCC---CCCCCCCceEEEEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD---KYDIGTGFGHFGIA  190 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~---~~~~~~g~~hi~f~  190 (376)
                      .+.-+.|+|+| +++++||+++||-++      +                 ..+.+.+..|.+   +....-++.-+-|.
T Consensus         5 ~~e~i~LNV~d-~~~~~fy~~~f~~~~------~-----------------~~l~f~ea~G~DL~~~~~~twDLe~Lkf~   60 (101)
T PF14507_consen    5 EFESIELNVPD-AKSQSFYQSIFGGQL------P-----------------FFLTFQEAQGPDLTIENNETWDLEMLKFQ   60 (101)
T ss_dssp             EE-EEEEEE-T--T---S--H---HHH------T-----------------TTEEEEE---CCGSS-TTSBSSEEEEEEE
T ss_pred             EEEEEEEeCCC-hhHHHHHHhccccCC------C-----------------ceEEEeeccCCccccCCCcEEeeEEEEEE
Confidence            46789999999 889999999886211      0                 012222222211   11122466778899


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEE
Q 017144          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL  235 (376)
Q Consensus       191 V~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel  235 (376)
                      |+   |+.++.+++.+.++=+  +      ...+++.+.||.|+-+-+
T Consensus        61 V~~~~Dl~~L~~~le~~~~fi--d------Kk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   61 VPKDFDLAALKSHLEEQEFFI--D------KKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             ES-S--HHHHHHHTTTS-EE----------TT-SEEEEE-TTS-EEEE
T ss_pred             ecCcccHHHHHHHhcccceEe--c------CCceEEEEECCcceEEEe
Confidence            99   4778888887744322  1      245688899999977654

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=94.29  E-value=1.2  Score=35.53  Aligned_cols=96  Identities=23%  Similarity=0.326  Sum_probs=51.1

Q ss_pred             CChhHHHHHHHHhhCCE-EeceecCC------CCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC--
Q 017144          253 GDLDRAINFYKKAFGME-LLRKRDNP------DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD--  323 (376)
Q Consensus       253 ~D~~~a~~FY~~~lG~~-~~~~~~~~------~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D--  323 (376)
                      .+.++|.+||.++||-. +......+      ..+.....+..+    +..+.....  ...+..+++ ..+++.++|  
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~--~~~~~~~~~-~sl~i~~~~~e   83 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDG--GPDFPFGNN-ISLCIECDDEE   83 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEE--STS----TT-EEEEEEESSHH
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECC--CCCCCCCCc-EEEEEEcCCHH
Confidence            78999999999999843 22222222      122222222221    122222111  122333444 467777776  


Q ss_pred             -HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          324 -VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       324 -l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                       ++++.++|.+.|-         + . .++..++|.-|..|.|+
T Consensus        84 e~~~~f~~Ls~gG~---------~-~-~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   84 EIDRIFDKLSEGGQ---------W-F-SRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHTTTE---------T-C-CEEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHcCCC---------c-c-ceeEEEEeCCCCEEEeC
Confidence             4556788887764         2 2 37889999999999986

>PF15067 FAM124: FAM124 family

Probab=93.07  E-value=0.92  Score=40.38  Aligned_cols=104  Identities=14%  Similarity=0.214  Sum_probs=62.3

Q ss_pred             CCccccccccC--ChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEccc---CCCccccCCCceeEE
Q 017144          243 EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYN---HGVTEYDKGNGYAQI  317 (376)
Q Consensus       243 ~~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~---~~~~~~~~g~g~~hi  317 (376)
                      ..+-.++|.|+  |.+.+.+||+-+|+-++.....  +  +- .|.-+...  +..++|.-.   .+..  .....-.-+
T Consensus       127 ~EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~--~--FC-~F~lys~~--~~~iQlsLK~lp~~~~--p~p~esavL  197 (236)
T PF15067_consen  127 KEILRFTLYCSFDNYEDMVRFYELILQREPTQQKE--D--FC-FFTLYSQP--GLDIQLSLKQLPPGMS--PEPTESAVL  197 (236)
T ss_pred             ccEEEEEEEecCCCHHHHHHHHHHHhccCcceeeC--C--cE-EEEEecCC--CeEEEEEeccCCCCCC--cccccceEE
Confidence            45677888888  9999999999999988754432  2  22 22222222  344444431   1221  122344578


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEE
Q 017144          318 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF  365 (376)
Q Consensus       318 af~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel  365 (376)
                      .|.|.|+-+++.-|-.--         .|.+ ....-..|||||.|-|
T Consensus       198 qF~V~~igqLvpLLPnpc---------~PIS-~~rWqT~D~DGNkILL  235 (236)
T PF15067_consen  198 QFRVEDIGQLVPLLPNPC---------SPIS-ETRWQTEDYDGNKILL  235 (236)
T ss_pred             EEEecchhhhcccCCCCc---------cccc-CCcceeeCCCCCEecc
Confidence            999999887765432111         1222 2336789999999854

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	376
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		8e-41
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		1e-31
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		5e-30
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		2e-20
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		1e-23
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		3e-13
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		7e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		7e-13
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		4e-10
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		7e-13
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		6e-10
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		2e-12
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		2e-09

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  164 bits (415), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 97/124 (78%)
Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 234 ELLE 237
           EL+E
Sbjct: 122 ELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 84/126 (66%)
Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 304
           L   MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 305 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSV 364
           V +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K  
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 122
Query: 365 FVDNLD 370
            ++  D
Sbjct: 123 LIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 82/124 (66%), Gaps = 5/124 (4%)
Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           YGV  Y     +GH  I VEDV + V  ++     +  E       +  +AF+ DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYY 121
Query: 233 FELL 236
            ELL
Sbjct: 122 IELL 125

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 304
           +   M+RVGDLDR+I FY +  GM++LRK D P+ KYT+  +GYGPE  + VLELTYN+G
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 305 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGW 361
           VT Y     Y  IAIG +DV +    ++     I  E       +  +   +DPDG+
Sbjct: 69  VTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGY 120

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 126/277 (45%), Gaps = 37/277 (13%)
Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-----------RYTNAFLGYGPE 161
           RR LH V++VG+  +T +FY + LGMK+LR  +  E            +++   +G+GPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 162 DSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV 221
           D HFV ELTYNYGV  Y +G  F   GI +       +  K +         P+      
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDF--MGITLASSQAVSNARKLE--------WPLTEVAEG 135
Query: 222 IAFIEDPDGYKFELLERG-PTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK 280
           +   E P GYKF L  R  P  +P+ +V L V DL +++N++    GM++       D +
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYEN----DEE 191
Query: 281 YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR 340
              A++GY   D    LEL    G  ++    G    +    ++    + +K    KI  
Sbjct: 192 KQRALLGYA--DNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLEDLMKRENQKILT 249
Query: 341 EPGPLPGINT------KITACLDPDGWKSVFVDNLDF 371
              PL  ++T      ++    DPDG +  FV +  F
Sbjct: 250 ---PLVSLDTPGKATVQVVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 30/148 (20%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYG-----PEDS------ 163
           +   + R+ D  K++ FYT  LG+ LL+K D P  +++  FL Y      P+D       
Sbjct: 32  LQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAW 91
Query: 164 ----HFVVELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKVTR 210
                  +ELT+N+G +  +  +         GFGH GIAV DV       +  G K  +
Sbjct: 92  TFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 151
Query: 211 EP--GPVKGGNTVIAFIEDPDGYKFELL 236
           +P  G +KG    +AFI+DPDGY  E+L
Sbjct: 152 KPDDGKMKG----LAFIQDPDGYWIEIL 175

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 45/182 (24%)
Query: 211 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           EP P   G    T  +   DPD    + L        L Q MLR+ D  ++++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 268 MELLRKRDNPDYKYTIAVMGYGPEDKN-----------------AVLELTYNHGVTE--- 307
           + LL+K D P  K+++  + Y  EDKN                 A LELT+N G  +   
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAY--EDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDET 112
Query: 308 --YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITACLDPD 359
             Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 113 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 168
Query: 360 GW 361
           G+
Sbjct: 169 GY 170

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 34/150 (22%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV-------- 166
           +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ED + +        
Sbjct: 35  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 92
Query: 167 ---------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKV 208
                    +ELT+N+G +  +  +         GFGH GIAV DV       +  G K 
Sbjct: 93  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 152
Query: 209 TREP--GPVKGGNTVIAFIEDPDGYKFELL 236
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 153 VKKPDDGKMKG----LAFIQDPDGYWIEIL 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 82/195 (42%), Gaps = 46/195 (23%)
Query: 206 GKVTREPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFY 262
           G    EP P  GG T    ++   D D    + L        L Q MLRV D  ++++FY
Sbjct: 1   GSHMAEPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFY 52
Query: 263 KKAFGMELLRKRDNPDYKYTIAVMGYGPEDKN-----------------AVLELTYNHGV 305
            +  GM L++K D P  K+++  + Y  EDKN                 A LELT+N G 
Sbjct: 53  TRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGT 110
Query: 306 TE-----YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITA 354
            +     Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +  
Sbjct: 111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAF 166
Query: 355 CLDPDG-WKSVFVDN 368
             DPDG W  +   N
Sbjct: 167 IQDPDGYWIEILNPN 181

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 74/150 (49%), Gaps = 34/150 (22%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV-------- 166
           +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ED + +        
Sbjct: 31  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 167 ---------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKV 208
                    +ELT+N+G +  +  +         GFGH GIAV DV       +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 209 TREP--GPVKGGNTVIAFIEDPDGYKFELL 236
            ++P  G +KG    +AFI+DPDGY  E+L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIEIL 174

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 46/190 (24%)
Query: 211 EPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           EP P  GG T    ++   D D    + L        L Q MLRV D  ++++FY +  G
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFYTRVLG 53
Query: 268 MELLRKRDNPDYKYTIAVMGYGPEDKN-----------------AVLELTYNHGVTE--- 307
           M L++K D P  K+++  + Y  EDKN                 A LELT+N G  +   
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET 111
Query: 308 --YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITACLDPD 359
             Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 112 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 167
Query: 360 G-WKSVFVDN 368
           G W  +   N
Sbjct: 168 GYWIEILNPN 177

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 34/150 (22%)
Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFV-------- 166
           +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ED + +        
Sbjct: 31  LQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKI 88
Query: 167 ---------VELTYNYGVDKYDIGT---------GFGHFGIAVEDVAKTVDLVKAKGGKV 208
                    +ELT+N+G +  +  +         GFGH GIAV DV       +  G K 
Sbjct: 89  AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKF 148
Query: 209 TREP--GPVKGGNTVIAFIEDPDGYKFELL 236
            ++P  G +KG    +AFI+DPDGY  ++L
Sbjct: 149 VKKPDDGKMKG----LAFIQDPDGYWIQIL 174

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 46/190 (24%)
Query: 211 EPGPVKGGNT---VIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           EP P  GG T    ++   D D    + L        L + MLRV D  ++++FY +  G
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQETMLRVKDPKKSLDFYTRVLG 53
Query: 268 MELLRKRDNPDYKYTIAVMGYGPEDKN-----------------AVLELTYNHGVTE--- 307
           M L++K D P  K+++  + Y  EDKN                 A LELT+N G  +   
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAY--EDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDET 111
Query: 308 --YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREP--GPLPGINTKITACLDPD 359
             Y  GN    G+  I I   DVY   +  +  G K  ++P  G + G    +    DPD
Sbjct: 112 QSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG----LAFIQDPD 167
Query: 360 G-WKSVFVDN 368
           G W  +   N
Sbjct: 168 GYWIQILNPN 177

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	376
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	2e-63
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	6e-39
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	6e-63
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	4e-41
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	3e-45
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	5e-33
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-39
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	1e-23
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	4e-04
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	4e-38
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	1e-12
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	2e-10
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-36
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	5e-23
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-33
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	5e-20
2p25_A	126	Glyoxalase family protein; structural genomics, MC	9e-33
2p25_A	126	Glyoxalase family protein; structural genomics, MC	6e-19
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	5e-32
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	9e-21
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	9e-30
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	3e-20
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	4e-27
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	6e-14
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	8e-27
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-18
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	6e-25
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	1e-16
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	8e-25
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	6e-16
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-22
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-17
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	4e-21
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	3e-09
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	3e-20
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	2e-19
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	4e-20
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	4e-15
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	8e-19
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	5e-09
3ghj_A	141	Putative integron gene cassette protein; integron	2e-18
3ghj_A	141	Putative integron gene cassette protein; integron	1e-05
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-17
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	1e-17
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	4e-06
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	1e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	5e-10
3huh_A	152	Virulence protein STM3117; structural genomics, ny	2e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	7e-10
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	2e-17
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	8e-09
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	3e-17
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-08
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-16
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-06
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	2e-16
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	5e-16
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	9e-04
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	1e-15
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	7e-08
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	1e-15
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	1e-08
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	5e-15
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	1e-09
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	5e-15
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	6e-15
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	6e-13
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	8e-15
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	3e-06
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	9e-15
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-11
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	9e-15
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	2e-10
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-14
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-06
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-14
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-04
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	2e-14
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	6e-06
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	2e-14
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	2e-04
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	2e-14
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-13
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	1e-13
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	4e-13
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	1e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-12
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	3e-07
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	2e-12
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	5e-05
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	2e-12
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-05
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	7e-12
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	8e-10
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	1e-11
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	4e-09
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	2e-11
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	8e-09
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	2e-11
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	3e-07
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-11
2i7r_A	118	Conserved domain protein; structural genomics cons	8e-10
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	1e-10
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	2e-07
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	2e-10
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	1e-05
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	3e-10
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	4e-07
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	5e-10
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	2e-07
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	6e-10
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	6e-10
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	3e-05
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	2e-09
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	5e-09
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	4e-06
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	8e-09
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	6e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	2e-07
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	9e-07
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	4e-07
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	5e-06
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	6e-07
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-05
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	1e-06
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	1e-04
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	5e-06
1xy7_A	166	Unknown protein; structural genomics, protein stru	6e-06
1xy7_A	166	Unknown protein; structural genomics, protein stru	3e-05
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-05
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	2e-04
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	8e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  198 bits (505), Expect = 2e-63
 Identities = 70/143 (48%), Positives = 84/143 (58%), Gaps = 5/143 (3%)

Query: 112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
            RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           NYGV  Y     +GH  I VEDV + V  ++     +  E          +AF+ DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGY 120

Query: 232 KFELLERGPTPEPLCQVMLRVGD 254
             ELL      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  134 bits (340), Expect = 6e-39
 Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 5/130 (3%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
             M+RVGDLDR+I FY +  GM++LRK D P+ KYT+  +GYGPE  + VLELTYN+GVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 307 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV 366
            Y     Y  IAIG +DV +    ++     I  E          +   +DPDG+    +
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYYIELL 125

Query: 367 DNLDFLKELE 376
           +    +++ E
Sbjct: 126 NEKTMMEKAE 135

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  196 bits (501), Expect = 6e-63
 Identities = 74/132 (56%), Positives = 98/132 (74%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           EL+E       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  140 bits (355), Expect = 4e-41
 Identities = 62/129 (48%), Positives = 85/129 (65%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
             MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 307 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV 366
           +Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   +
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELI 124

Query: 367 DNLDFLKEL 375
           +  D  + L
Sbjct: 125 EEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  152 bits (386), Expect = 3e-45
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 31/181 (17%)

Query: 94  PTSNTVTEQNVLDWVKS-----DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE 148
           P S+ +T++                 +   + R+ D  K++ FYT  LG+ LL+K D P 
Sbjct: 6   PASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPA 65

Query: 149 DRYTNAFLGYGPED---------------SHFVVELTYNYGVD-----KYDIG----TGF 184
            +++  FL Y  ++                   +ELT+N+G +      Y  G     GF
Sbjct: 66  MKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGF 125

Query: 185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP 244
           GH GIAV DV       +  G K  ++P    G    +AFI+DPDGY  E+L        
Sbjct: 126 GHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPNKIATI 183

Query: 245 L 245
           +
Sbjct: 184 I 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  120 bits (303), Expect = 5e-33
 Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 37/179 (20%)

Query: 211 EPGPVKGG---NTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           EP P   G    T  +   DPD    + L        L Q MLR+ D  ++++FY +  G
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 268 MELLRKRDNPDYKYTIAVMGYGPED---------------KNAVLELTYNHGVTE----- 307
           + LL+K D P  K+++  + Y  ++               + A LELT+N G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 308 YDKGN----GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWK 362
           Y  GN    G+  I I   DVY   +  +  G K  ++P    G    +    DPDG+ 
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPD--DGKMKGLAFIQDPDGYW 171

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  137 bits (346), Expect = 1e-39
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 6/137 (4%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ H+   V  +   + FY   L +KLL   D+P      AFL  G      +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 174 GVDKY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGKV-TREPGPVKGGNTVIAFI--EDP 228
            + K+    G G  H  I V+ + + +  VK  G ++   EP P   G   +AF+     
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 229 DGYKFELLERGPTPEPL 245
            G  +E  E+    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 94.9 bits (236), Expect = 1e-23
 Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 15/132 (11%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
            + + V  +   + FY  +  ++LL   D P     IA +  G      +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 307 EYDKGNGYA--QIAIGTDDVYKTAEAIKLSGGK-ITREPGPLPGINTKITACLDPDGWKS 363
           ++ +  G     IAIG   + +  + +K +G + I  EP P               G + 
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVP------------GARGAQV 118

Query: 364 VFVDNLDFLKEL 375
            F+        L
Sbjct: 119 AFLHPRSARGVL 130

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 13/99 (13%)

Query: 186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE-------- 237
           H GIAV  +   +                +      IAF+E  +  K ELLE        
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES-KIELLEPLSEESPI 69

Query: 238 ---RGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRK 273
                   E +  + + V  ++  I   K+  G++++  
Sbjct: 70  AKFIQKRGEGIHHIAIGVKSIEERIQEVKEN-GVQMIND 107

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  137 bits (346), Expect = 4e-38
 Identities = 52/251 (20%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVDKYD 179
             D     KFYT   G        +P     Y+ A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           +   +  + IAV+DV   VD V   GG+V      + G    ++FI DP G    L +  
Sbjct: 94  MPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGAAVGLWQAN 151

Query: 240 P--------TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE 291
                        L    L     D A+ FY+   G+            Y +   G    
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV 211

Query: 292 DKNAVLELTYNHGVTEYDKGNG--YAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGIN 349
                       G  E        +  +    DD   TA     +GG++  EP  +P + 
Sbjct: 212 -----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV- 259

Query: 350 TKITACLDPDG 360
            +     DP G
Sbjct: 260 GRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 66.5 bits (162), Expect = 1e-12
 Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 14/142 (9%)

Query: 101 EQNVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP 160
            +++   + ++   ++         D  + FY   +G+            Y     G   
Sbjct: 151 NRHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAE 210

Query: 161 EDSHFVVELTYNYGVDKYDIGTGFGHFGI--AVEDVAKTVDLVKAKGGKVTREPGPVKGG 218
                        G  +  +     H+ +  AV+D   T     A GG+V  EP  +   
Sbjct: 211 V-----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV 259

Query: 219 NTVIAFIEDPDGYKFELLERGP 240
               A + DP G  F +L+  P
Sbjct: 260 -GRFAVLSDPQGAIFSVLKAAP 280

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 60.3 bits (146), Expect = 2e-10
 Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 10/113 (8%)

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           L+  D   A  FY   FG         P     Y++A +         V  +        
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAP 91

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                 +    I  DDV    + +   GG++      +     +++   DP G
Sbjct: 92  EGMPPIWN-TYIAVDDVDAVVDKVVPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  127 bits (321), Expect = 3e-36
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ HV   V DL+K   FY   LG ++     +PE   +  F+  G      +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 173 YGVDKY---DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
             +  +   +   G  H  I V+++   V  +K K  +   E   +      + F+  +D
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKD 123

Query: 228 PDGYKFELLE 237
             G   EL +
Sbjct: 124 CGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 92.5 bits (230), Expect = 5e-23
 Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 7/120 (5%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
            V + V DL++A  FYK   G ++      P++  ++  +  G      +  L  +  + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 307 EY---DKGNGYAQIAIGTDDVYKTAEAIKLSGGK-ITREPGPLPGINTKITACL--DPDG 360
            +   +K  G   I I  D++      +K    + ++ E          +      D  G
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAH-GKPVIFLHPKDCGG 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  120 bits (302), Expect = 2e-33
 Identities = 33/133 (24%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF----VVE 168
           + + HV   V D DK+ +FY   LG +++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 169 LTYNYGVDKYDI---GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN-TVIAF 224
             Y    ++        G  H    VEDV  +   + A G  +  E           +AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 225 IEDPDGYKFELLE 237
             DPDG   EL E
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 84.4 bits (209), Expect = 5e-20
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 16/124 (12%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V L V D D++  FY    G E++R+   P        +  G    +  LE+  N     
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDS 64

Query: 308 Y-----------DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL 356
                        +  G   +A   +DV  + + +   G ++            K+    
Sbjct: 65  NYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALGIRVEE-VRYDDYTGKKMAFFF 123

Query: 357 DPDG 360
           DPDG
Sbjct: 124 DPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  118 bits (297), Expect = 9e-33
 Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + HV     +   T  FY E LG ++LR+   PE       L  G ++          
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQF 62

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV-IAFIEDPDGY 231
                Y    G  H    VE + + +  +  +G  +  EP  V       + F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 232 KFELLE 237
             EL E
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 80.9 bits (200), Expect = 6e-19
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 10/117 (8%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH---G 304
           V +   +     NFY +  G E+LR+   P+       +  G    +  LE+  +     
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG----SQELEIFISDQFPA 64

Query: 305 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL-PGINTKITACLDPDG 360
              Y +  G   +A   + + +    +   G  I  EP  +      K+T   DPDG
Sbjct: 65  RPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDG 119

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  116 bits (293), Expect = 5e-32
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 14/133 (10%)

Query: 114 RMLHVVYR--VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           ++L ++ R  V DL+  ++FY E L   +  + +IP+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
             G ++             V+ + K    ++  G ++ R P  V  G      +   DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--MTVRHSDGS 111

Query: 232 KFELLERGPTPEP 244
             E +E       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 86.4 bits (214), Expect = 9e-21
 Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 12/113 (10%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
             L V DL+ A+ FY++     +  + + P     +A +         +L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLIA---GSEE 59

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
             K     Q     D + K    ++ +G +I R P  +P            DG
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRNMT--VRHSDG 110

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  110 bits (277), Expect = 9e-30
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ H+ Y V ++D  +K +     ++          +    F+  G     + VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPD 62

Query: 174 GVDK-----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-GNTVIAFIED 227
           G D         G+   H    VED+ K+++ +   G  + ++        N  +AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 228 PDGYKFELLER 238
            D    ELLE+
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 84.8 bits (210), Expect = 3e-20
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 10/119 (8%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           +   V ++D A+  +K+   +E      +   K  I  +  G       +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDS 66

Query: 308 -----YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA-CLDPDG 360
                  KG+    I    +D+ K+ E +   G  + ++    P I+ +  A     D 
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  104 bits (260), Expect = 4e-27
 Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 12/140 (8%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--------RYTNAFLGYGPEDSH 164
           R++ H+   V D+  +  FY   LG+  L   ++P          +  N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 165 FVVELTYNYGVDKYDIGTGFGHFGIAVED--VAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
           F          +     T   H    ++     + V ++      +    GPV       
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENK--IAIAHGPVTRPTGRG 135

Query: 223 AFIEDPDGYKFELLERGPTP 242
            +  DPDG+  E+       
Sbjct: 136 VYFYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 68.0 bits (166), Expect = 6e-14
 Identities = 20/121 (16%), Positives = 30/121 (24%), Gaps = 8/121 (6%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNP--------DYKYTIAVMGYGPEDKNAVLEL 299
           + L V D+  +  FY    G+  L   + P          K    +   G          
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 300 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 359
                            +A   D          +   KI    GP+     +     DPD
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPD 142

Query: 360 G 360
           G
Sbjct: 143 G 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score =  103 bits (257), Expect = 8e-27
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV 167
            +S+  R+      V D  K   FYT  LG  +     +  DR+        P+ +  ++
Sbjct: 20  FQSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLL 79

Query: 168 ELTYNYGVDKYD---IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAF 224
           E + +  V  +    +  G      AV+D+A   + + A G + T+EP  +     V A 
Sbjct: 80  EPSSHAAVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAI 137

Query: 225 IEDPDGYKFELLE 237
           ++D  G   +L++
Sbjct: 138 LDDTCGNLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 80.9 bits (199), Expect = 1e-18
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 5/119 (4%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 304
           +    + V D  +A +FY    G  +         ++   V    P+    +LE + +  
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 305 VTEYDK---GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           VT + +    +G    +   DD+    E +   G + T+EP  +           D  G
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCG 143

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 97.3 bits (242), Expect = 6e-25
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           ++ HV     +L++  +FY    G       +     + + FL +   +    +E+    
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSF---EDGARLEIMSRT 59

Query: 174 GVD--KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDP 228
            V         G+ H  I+    E V +  + ++  G  +  EP    G     + + DP
Sbjct: 60  DVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDP 118

Query: 229 DGYKFEL 235
           +G + E+
Sbjct: 119 EGNRIEI 125

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 74.6 bits (183), Expect = 1e-16
 Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V L   +L++   FY   FG       +N    +    + +   +  A LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSF---EDGARLEIMSRTDVTG 63

Query: 308 YDKGN--GYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
              G   G+A IAI     + V +  E ++  G  I  EP    G     +  LDP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDPEG 120

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 98.0 bits (244), Expect = 8e-25
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 20/143 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE----------D 162
            RM +V   V  LD  I F+ E +G+ L  + ++ E  +     G G +          D
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANV-EGEWAGRVTGLGSQCVEIAMMVTPD 67

Query: 163 SHFVVELTYNYGVDKYDI-------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
            H  +EL+                   G+      VED+ + V  +   G ++  E    
Sbjct: 68  GHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEV-VQ 126

Query: 216 KGGNTVIAFIEDPDGYKFELLER 238
              +  + +I   +G    L E 
Sbjct: 127 YENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 73.3 bits (180), Expect = 6e-16
 Identities = 23/131 (17%), Positives = 48/131 (36%), Gaps = 22/131 (16%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDN-----------PDYKYTIAVMGYGPEDKNAV 296
           V + V  LD AI+F++   G+ L  + +                  IA+M     D ++ 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP--DGHSR 71

Query: 297 LELT-YNHGVTEYDKGN------GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGIN 349
           +EL+ +    T  D         GY ++    +D+ +    +   G ++  E       +
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-S 130

Query: 350 TKITACLDPDG 360
            ++      +G
Sbjct: 131 YRLCYIRGVEG 141

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 91.6 bits (227), Expect = 1e-22
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 16/128 (12%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF----VVELTYNYGVD 176
              D++ +  F+ + LG ++  +R  P++ +   +L     D            +  G  
Sbjct: 12  YCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGP---VKGGNTVIA----FIEDPD 229
           ++ +G+G  +F   V D+      V                 + G+++       ++ PD
Sbjct: 68  EFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 230 GYKFELLE 237
           GY F   +
Sbjct: 127 GYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 76.2 bits (187), Expect = 5e-17
 Identities = 19/129 (14%), Positives = 39/129 (30%), Gaps = 8/129 (6%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 308
            L   D++ + +F+    G E+  +R + ++ Y          +  A     +  G  E+
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEF 69

Query: 309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP-------GINTKITACLDPDGW 361
             G+G         D+    + +  S                       K      PDG+
Sbjct: 70  PLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGY 128

Query: 362 KSVFVDNLD 370
              F  ++ 
Sbjct: 129 LFRFCQDIH 137

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 87.9 bits (218), Expect = 4e-21
 Identities = 24/134 (17%), Positives = 38/134 (28%), Gaps = 14/134 (10%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE---- 168
             ++       DLD    FY +  G++++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 169 LTYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI 225
                         G GHF        +V +     +A    V        G  +V  +I
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSV--YI 119

Query: 226 EDPDGYKFELLERG 239
            DP G   E+ E  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 21/118 (17%), Positives = 31/118 (26%), Gaps = 10/118 (8%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAV----LELTYNH 303
             L   DLD A  FY+  FG+E++ K         +     G +               +
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESSRADAN 66

Query: 304 GVTEYDKGNGYAQIAIGTDDVYKTAEAIK-LSGGKITREPGPLPGINTKITACLDPDG 360
                    G        DD  +  E        +I  E        +      DP G
Sbjct: 67  NPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAG 124

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 85.3 bits (211), Expect = 3e-20
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 5/118 (4%)

Query: 122 VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG 181
             D D+   FY +  G  +    +IP+  Y+    G   E          N G+ +    
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG 239
           T      + VE +   ++ +++ GGK      PV G     A+  D +G    L E  
Sbjct: 90  TTPVVT-VDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 83.4 bits (206), Expect = 2e-19
 Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 5/120 (4%)

Query: 241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT 300
               +    +   D DRA  FY+ AFG  +    + PD  Y++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 301 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
            N G+ +  +      + +  + +    E I+  GGK      P+  +        D +G
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERIESLGGKTVTGRTPVGNM-GFAAYFTDSEG 136

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 84.6 bits (209), Expect = 4e-20
 Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 12/128 (9%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
           + +    G LD+ I+FY E L +K + +     + Y     G     + + +E T   G 
Sbjct: 13  IRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLP--HADYHLEFTQYEGG 69

Query: 176 DKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP--VKGGNTVIAFIEDPDG 230
               +          V    ++A     +K  G +      P    GG T    IEDPDG
Sbjct: 70  STAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT----IEDPDG 125

Query: 231 YKFELLER 238
           ++   +  
Sbjct: 126 WRIVFMNS 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 70.7 bits (173), Expect = 4e-15
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 8/118 (6%)

Query: 251 RVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK 310
             G LD  I FY++   ++ + +    +  Y   + G      +  LE T   G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLP--HADYHLEFTQYEGGSTAPV 74

Query: 311 GNGYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVF 365
            +  + +        ++      +K  G +      P            DPDGW+ VF
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIE--DPDGWRIVF 130

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 80.6 bits (199), Expect = 8e-19
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 12/123 (9%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
           + V   VG  ++   FY E +GM+ + K +  + R    +   G ++ H  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGG-CWFKCGNQEIHIGVEQNFNPA- 71

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
                     H    V  + +    +  +G +V  +            ++ DP G + E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDVIRF--YVSDPFGNRIEF 121

Query: 236 LER 238
           +E 
Sbjct: 122 MEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 52.9 bits (127), Expect = 5e-09
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 12/114 (10%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
           QV   VG  + A  FY +  GME + K +    +          E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 307 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           +       A  A     + +  + +   G ++  +    P +        DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFG 116

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 80.0 bits (198), Expect = 2e-18
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 19/127 (14%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + +  V  +V +L+K+ +FYTE LG +          R+   ++  G      + E   N
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS-GRAGMVVLQEEKEN 83

Query: 173 YGVDKYDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDP 228
           +            HF   VE  ++      +++KG  V    GPV          +  DP
Sbjct: 84  WQQQ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQAVSLYFADP 131

Query: 229 DGYKFEL 235
           +G+  E 
Sbjct: 132 NGHALEF 138

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 15/115 (13%), Positives = 36/115 (31%), Gaps = 15/115 (13%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V ++V +L+++  FY +  G E         +             +  ++ L       E
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSARRW------NFLWVSGRAGMVVL------QE 79

Query: 308 YDKGNGYAQIAIG--TDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
             +       +      ++    +A++  G  +   P     +        DP+G
Sbjct: 80  EKENWQQQHFSFRVEKSEIEPLKKALESKGVSV-HGPVNQEWMQAVSLYFADPNG 133

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 82.7 bits (203), Expect = 1e-17
 Identities = 43/281 (15%), Positives = 78/281 (27%), Gaps = 51/281 (18%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV     D       ++  LG  L  + D+      +A L        F+    Y +G D
Sbjct: 34  HVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGAD 93

Query: 177 KYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-- 217
                                G       + V D         A G +    P  +    
Sbjct: 94  AATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF 153

Query: 218 --------GNTVIAFIEDPDGY-------KFELLERGPTPEP----LCQVMLRVGDLDRA 258
                   G+ V+ ++  PDG         FE +      +        ++  V +L  A
Sbjct: 154 RLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPELAPA 213

Query: 259 INFYKKAFGMELLRKRDNPDYKYTIAVMGYG-PEDKNAVLELTYNHGVT----------- 306
             ++    G     +    D     + +      + +  + L  N  V            
Sbjct: 214 AAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF 273

Query: 307 -EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP 346
            ++  G G   +A+ +DDV +T   ++        E    P
Sbjct: 274 LDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP 314

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 77.6 bits (191), Expect = 1e-17
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 115 ML----HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN-AFLGYGPEDSHFVVEL 169
           M+    H+ + V DL++  +        + +   D  +   +   F   G       + +
Sbjct: 1   MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWV 54

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
               G    +       F I   D  +  + V   G  +      V+G    I F  D D
Sbjct: 55  AIMQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF-YDDD 113

Query: 230 GYKFEL 235
            + FEL
Sbjct: 114 NHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 56.4 bits (136), Expect = 5e-10
 Identities = 18/114 (15%), Positives = 32/114 (28%), Gaps = 8/114 (7%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK-YTIAVMGYGPEDKNAVLELTYNHGVT 306
           +   V DL+R     +  F    +   D   +          G       + +    G  
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGEK 61

Query: 307 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
             ++   +    I   D  + AE +   G  + R P P      +     D D 
Sbjct: 62  LAERSYNHIAFKIDDADFDRYAERVGKLGLDM-RPPRPRVEGEGRSIYFYDDDN 114

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 77.8 bits (191), Expect = 2e-17
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 8/125 (6%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ H+V  V D+  TI+FY E LG   +  +           L +G +  +   +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDPDG 230
                           I    +   V  +   G  +   P    G    I   +I DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 231 YKFEL 235
              E+
Sbjct: 136 NLIEI 140

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 56.2 bits (135), Expect = 7e-10
 Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 8/115 (6%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           ++L V D+   I FY++  G   +  + N         + +G +  N   +         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVTFKQNRKA------LIFGAQKINLHQQEMEFEPKAS 80

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDG 360
                      I +  +      I  +G  I   P    G   +I +    DPDG
Sbjct: 81  RPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 77.2 bits (190), Expect = 2e-17
 Identities = 29/131 (22%), Positives = 44/131 (33%), Gaps = 13/131 (9%)

Query: 113 RRML-HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           + ML HV   V  L+++I F+   LG                    Y    ++ V   T 
Sbjct: 18  QGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTE 72

Query: 172 NYGVD--KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAF 224
           +       +   TG  H        E V +    +K +G  +  E       G N    F
Sbjct: 73  DRFQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVF 132

Query: 225 IEDPDGYKFEL 235
            EDP+  K E+
Sbjct: 133 CEDPNRIKVEI 143

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 53.0 bits (127), Expect = 8e-09
 Identities = 20/120 (16%), Positives = 32/120 (26%), Gaps = 12/120 (10%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V + V  L+ +I F+    G        +           Y       V   T +   T 
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDRFQTP 78

Query: 308 YDKGN--GYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDG 360
                  G   +A      + V +  + +K  G  I  E            A    DP+ 
Sbjct: 79  TFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 75.5 bits (186), Expect = 3e-17
 Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 19/126 (15%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
            + H+   V D+    +F  +  G+              NAF      D  F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTC-------SGTRGNAFAVMRDND-GFILTLMKGK 54

Query: 174 GVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
            V          H G      E V K    +K  G     EP       T   ++E P G
Sbjct: 55  EVQY----PKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYTF--YVEAPGG 106

Query: 231 YKFELL 236
           +  E++
Sbjct: 107 FTIEVM 112

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 13/115 (11%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           + L V D+  A  F +K FG+     R N              ++   +L L     V +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWK 362
           Y K           + V K  + +K  G  +     P    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRLKEDGFLV----EPPKHAHAYTFYVEAPGGFT 108

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 74.7 bits (184), Expect = 2e-16
 Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 8/127 (6%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           HV   V DLD + ++YTE L  K L +     D  + A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 177 KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
             +   G  H   +V    D+    + +   G      P        ++AF  D D    
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERLAKAG--AAFTPTQELPFGWILAF-RDADNIAL 122

Query: 234 ELLERGP 240
           E +    
Sbjct: 123 EAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 45.1 bits (107), Expect = 4e-06
 Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 10/117 (8%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTY--NHGV 305
           V L V DLD +  +Y +    + L +       +   V+  G       + L      G 
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGG-----LSIVLREHDGGGT 63

Query: 306 TEYDKGN-GYAQIAIGTDDVYKTAEAI-KLSGGKITREPGPLPGINTKITACLDPDG 360
             +D+   G   ++   + +        +L+       P         I A  D D 
Sbjct: 64  DLFDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFGWILAFRDADN 119

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 38/231 (16%), Positives = 69/231 (29%), Gaps = 34/231 (14%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY--G 174
           H+     + ++   FY   LG++ ++     +D      L YG +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMY-HLFYGDKTGSPGTELSFFEIPL 91

Query: 175 VDKYDIGTG-FGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
           V +   GT      G+ V          +  +     V             + F ED +G
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFD--VKHSEMTTYANRPALQF-EDAEG 148

Query: 231 YKFELLERGPTPEPLCQ------------------VMLRVGDLDRAINFYKKAFGMELLR 272
            +  LL          +                  V L V  LD+  +   + FG   + 
Sbjct: 149 LRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVS 208

Query: 273 KRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD 323
           + D        A+      +    + + Y  G TE         +AI   +
Sbjct: 209 RNDQ------EAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKN 253

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 73.3 bits (180), Expect = 5e-16
 Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + H+   V DL K++ F+ E LG+ L  + +      T A+L  G        +    
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ 56

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V   +       F +A ED       ++  G  VT        G +   +  DPDG+K
Sbjct: 57  -YVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHK 111

Query: 233 FEL 235
            EL
Sbjct: 112 LEL 114

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.2 bits (89), Expect = 9e-04
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDN 276
           + L V DL +++ F+ +  G+ L  + + 
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNT 36

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 72.2 bits (177), Expect = 1e-15
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 8/120 (6%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGV 175
           H+   V DL+KT  F       + +              F           + +    G 
Sbjct: 7   HITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAG------LWICIMEGD 60

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
              +       F I  E+V +  + +KA G ++ +   P   G     +  D D + FEL
Sbjct: 61  SLQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 50.2 bits (120), Expect = 7e-08
 Identities = 19/116 (16%), Positives = 36/116 (31%), Gaps = 12/116 (10%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK-YTIAVMGYGPEDKNAVLELTYNHGVT 306
           + L V DL++   F +  F  E +    +  +                  + +     + 
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIA----GLWICIMEGDSLQ 63

Query: 307 EYDKGNGYAQIAIGT--DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           E      Y  IA     ++V +  E IK  G ++ +   P      +     D D 
Sbjct: 64  E----RTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDN 114

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 75.6 bits (186), Expect = 1e-15
 Identities = 46/279 (16%), Positives = 87/279 (31%), Gaps = 52/279 (18%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  HV  RV D+ K ++ Y E LG+  + + D  + R    +L    E   F + L   
Sbjct: 6   MRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--QGR---VYLKAWTEVDKFSLVLR-- 58

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
               + D   G    G  V   + + +    + A G  V + P G +      + F + P
Sbjct: 59  ----EAD-EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRF-QAP 112

Query: 229 DGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAF 266
            G+ FEL                        +G         ++   +L    + + K  
Sbjct: 113 SGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVL 172

Query: 267 GMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT---DD 323
           G  L  +  + +       +    +  +             + +      ++      +D
Sbjct: 173 GFYLAEQVLDENGTRVAQFLSLSTKAHDVAF--------IHHPEKGRLHHVSFHLETWED 224

Query: 324 VYKTAEAIKLSGGKITREPGP-LPGINTKITACLDPDGW 361
           + + A+ I ++   I   P          I    DP G 
Sbjct: 225 LLRAADLISMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 17/129 (13%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVEL 169
            R  H +    +L  T   +T+ LG  L    +            FL      +H V   
Sbjct: 149 VRFDHALMYGDELPATYDLFTKVLGFYL---AEQVLDENGTRVAQFLSLST-KAHDVA-- 202

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
                   +       H    +   ED+ +  DL+      +   P      +    +  
Sbjct: 203 -----FIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFF 257

Query: 227 DPDGYKFEL 235
           DP G + E+
Sbjct: 258 DPSGNRNEV 266

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 70.8 bits (173), Expect = 5e-15
 Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 9/126 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE-LTY 171
           +++  +   +GDL+ + +FY E  G        +  +     +   G   + ++V+ L  
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAP-----VFRNPEIIFYQMNGFVLATWLVQNLQE 58

Query: 172 NYGVDKYDIGTGF--GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           + GV            H   A  +VA  ++ + A GG++ R          +  ++ DPD
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAP-PHGGLRGYVADPD 117

Query: 230 GYKFEL 235
           G+ +E+
Sbjct: 118 GHIWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 55.4 bits (133), Expect = 1e-09
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 7/115 (6%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT--IAVMGYGPEDKNAVLELTYNHGV 305
           + L +GDL+ +  FY + FG   + +     +       +  +  ++    L+      V
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQN----LQEDVGVAV 64

Query: 306 TEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           T        A       +V    E +  +GG++ R     P    +     DPDG
Sbjct: 65  TSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGLRGYV-ADPDG 118

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 73.7 bits (181), Expect = 5e-15
 Identities = 44/263 (16%), Positives = 75/263 (28%), Gaps = 55/263 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  H   RV +L++ I FY   LG+     RD     Y   F  +   D    +     
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVET-GRDDQGRVY---FKCWDERDHSCYI----- 57

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREP-GPVKGGNTVIAFIEDP 228
             + + D   G   FG  V     + K    ++A G   TR P G +      + F E P
Sbjct: 58  --IREAD-TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-ELP 113

Query: 229 DGYKFEL----------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAF 266
            G+  EL                       E G  P  L   +L   ++      + +  
Sbjct: 114 SGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVL 173

Query: 267 GMEL-LRKRDNPDYKYTIAVMGYGPEDKNAVLELT-----YNHGVTEYDKGNGYAQIAIG 320
           G  L  R             +    +  +            +H     +           
Sbjct: 174 GFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYPEKGKLHHCSFLLE----------S 223

Query: 321 TDDVYKTAEAIKLSGGKITREPG 343
            + V +  + + ++   +   P 
Sbjct: 224 WEQVLRAGDIMSMNEVNVDIGPT 246

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 70.3 bits (172), Expect = 6e-15
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 7/125 (5%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R ++ +  V D++++  FY + LG+K+L         +     G+   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 174 GVDKYDI-GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             D  +  G           DV      +     ++         G  V     DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 233 FELLE 237
            E+ E
Sbjct: 122 IEVGE 126

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 64.9 bits (158), Expect = 6e-13
 Identities = 17/117 (14%), Positives = 38/117 (32%), Gaps = 7/117 (5%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK-YTIAVMGYGPEDKNAVLELTYNH 303
               +  V D++R+ +FY+   G+++L   D   +  +      +        +  T + 
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKIL--EDFGSFVLFETGFAIHEGRSLEETIWRTSSD 66

Query: 304 GVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
              +   G     +     DV    + I     ++            ++    DPDG
Sbjct: 67  --AQEAYGRRNMLLYFEHADVDAAFQDIA-PHVELIHPLERQAW-GQRVFRFYDPDG 119

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 70.1 bits (171), Expect = 8e-15
 Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 14/134 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL--GYGPEDSHFVVELTYNYG 174
           HV Y   D D+  K+Y E  G   L + + PE       +       +    V++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 175 --------VDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG-GNTVIAFI 225
                   + K++   G  H    V+D+      ++ +G ++  +  P  G G   I F+
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFM 130

Query: 226 --EDPDGYKFELLE 237
             +   G   EL +
Sbjct: 131 HPKSGKGVLIELTQ 144

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 11/122 (9%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVM--GYGPEDKNAVLELTYNHG 304
            V     D D A  +Y++ FG   L + +NP+      +M       +    +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 305 --------VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL 356
                   + +++   G   +A   DD+   +  ++  G ++  +  P  G        +
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFM 130

Query: 357 DP 358
            P
Sbjct: 131 HP 132

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 70.0 bits (171), Expect = 9e-15
 Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 12/129 (9%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVEL 169
             + +V     D+     FY +  G + +     P  R      + +G+   +++ +++L
Sbjct: 7   ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQL 66

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIE 226
                    +           V   E V K V +  A G  + + P      +   A + 
Sbjct: 67  A-----QFSETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYET-YYHWYQAVLL 120

Query: 227 DPDGYKFEL 235
           DP+   F +
Sbjct: 121 DPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 59.9 bits (145), Expect = 3e-11
 Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 6/116 (5%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V +   D+     FY++ FG + +    +P ++           + +   EL      +E
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSE 71

Query: 308 YDKGNGYAQIAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                    +    D    V K       +G  + + P      +      LDP+ 
Sbjct: 72  T--SGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPER 124

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 69.6 bits (170), Expect = 9e-15
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 12/125 (9%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
            +  +      L   + FY   +G +    +         A              L Y+ 
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN------GVEFSL-YSI 57

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTV-DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
              +          G  + D+ KTV +LVK  G     +P  +  G    A + DPDG+ 
Sbjct: 58  QNPQRSQIPSL-QLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHS 114

Query: 233 FELLE 237
            EL E
Sbjct: 115 IELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 56.9 bits (137), Expect = 2e-10
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 12/115 (10%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
            + +    L   + FY +  G +    + +   +   AV             L       
Sbjct: 9   SITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN------GVEFSLYSIQ--N 59

Query: 307 EYDKGNGYAQIAIGTDDVYKT-AEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                    Q+     D+ KT  E +K+ G     +P  +P     I   LDPDG
Sbjct: 60  PQRSQIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 69.4 bits (169), Expect = 1e-14
 Identities = 27/129 (20%), Positives = 39/129 (30%), Gaps = 11/129 (8%)

Query: 110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
            +   + H+     DLD+   FY   LG KL R+     DR T  F G        V  L
Sbjct: 5   RNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARR---YPDRITLDFFGD-----QLVCHL 56

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP---GPVKGGNTVIAFIE 226
           +  +  +       FG      +       L K +G     +               F+ 
Sbjct: 57  SDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLI 116

Query: 227 DPDGYKFEL 235
           DP     E 
Sbjct: 117 DPSNNLLEF 125

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 17/116 (14%), Positives = 32/116 (27%), Gaps = 11/116 (9%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           + +   DLD A +FY    G +L R+  +      I +  +G +    V  L+       
Sbjct: 13  LAIPARDLDEAYDFYVTKLGCKLARRYPDR-----ITLDFFGDQL---VCHLSDRWDREV 64

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP---GPLPGINTKITACLDPDG 360
                 +              +  K  G     +            +    +DP  
Sbjct: 65  SMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSN 120

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 69.0 bits (169), Expect = 1e-14
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 14/123 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + H+   V DL  +I FY + LG +L  + D        A+L  G        E  Y 
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYG 56

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                Y        FGIA  D A+    ++A G  V         G++   +  DPDG++
Sbjct: 57  GPAADYT----HYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHR 108

Query: 233 FEL 235
            E 
Sbjct: 109 LEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY 279
           + L V DL  +I FY+   G  L  + D   Y
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQGAY 39

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 72.7 bits (178), Expect = 2e-14
 Identities = 44/274 (16%), Positives = 74/274 (27%), Gaps = 50/274 (18%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  ++   V DL K+ +FY + LG+ +  + +         +L    E  H  + L   
Sbjct: 16  VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR-- 67

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP-VKGGNTVIAFIEDP 228
               +         F   V    +V       K  G +  R      KG    +   EDP
Sbjct: 68  ----QGP-IAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRV-EDP 121

Query: 229 DGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRK 273
            G+ +E                L        L        D+ R   +  +  G  +   
Sbjct: 122 LGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSED 180

Query: 274 RDNPDYKYTIAVMGYGPEDKNAVL----ELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAE 329
             + D     A M       +  L        +H                   ++ +  +
Sbjct: 181 IKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHHVAFATH----------EKHNIIQICD 230

Query: 330 AIKLSGGKITREPGPLPGINTKITA--CLDPDGW 361
            +         E GP     +       LDPDG 
Sbjct: 231 KMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 46.5 bits (110), Expect = 6e-06
 Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 21/131 (16%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI---PEDRYTNAFLGYGPEDSHFVVEL 169
            R+ H      D+ +   +  E LG ++    +     +     A++       H     
Sbjct: 151 VRLDHFNQVTPDVPRGRAYL-EDLGFRV---SEDIKDSDGVTYAAWMHRKQ-TVHDTALT 205

Query: 170 TYNYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI- 225
             N        G    H   A     ++ +  D + A       E GP + G +   ++ 
Sbjct: 206 GGN--------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLY 257

Query: 226 -EDPDGYKFEL 235
             DPDG++ E+
Sbjct: 258 ILDPDGHRIEI 268

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 72.8 bits (178), Expect = 2e-14
 Identities = 47/274 (17%), Positives = 76/274 (27%), Gaps = 50/274 (18%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  +    V DL K+  FY + LG+ +  + +         +L    E  H  + LT  
Sbjct: 16  LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT-- 67

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR-EPGPVKGGNTVIAFIEDP 228
               K             V   EDV K     +  G +  R + G VKG    +   EDP
Sbjct: 68  ----KGP-VAALKAMAFRVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRV-EDP 121

Query: 229 DGYKFEL---------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRK 273
            G+ +E                L        L        D+ R   + +   G  +   
Sbjct: 122 LGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTED 180

Query: 274 RDNPDYKYTIAVMGYGPEDKNAVLELT----YNHGVTEYDKGNGYAQIAIGTDDVYKTAE 329
             + +     A M       +  L        +H                   ++ +  +
Sbjct: 181 IQDDEGTTYAAWMHRKGTVHDTALTGGNGPRLHHVAFSTH----------EKHNIIQICD 230

Query: 330 AIKLSGGKITREPGPLPGINTKITA--CLDPDGW 361
            +         E GP     +       LDPD  
Sbjct: 231 KMGALRISDRIERGPGRHGVSNAFYLYILDPDNH 264

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 42.4 bits (99), Expect = 2e-04
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 15/128 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ H      D+ +  K+  E LG ++       E     A++       H       N
Sbjct: 151 VRLDHFNQVTPDVPRGRKYL-EDLGFRVTEDIQDDEGTTYAAWMHRKG-TVHDTALTGGN 208

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
                   G    H   +     ++ +  D + A       E GP + G +   ++   D
Sbjct: 209 --------GPRLHHVAFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 228 PDGYKFEL 235
           PD ++ E+
Sbjct: 261 PDNHRIEI 268

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 72.4 bits (177), Expect = 2e-14
 Identities = 24/185 (12%), Positives = 54/185 (29%), Gaps = 42/185 (22%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +           +T+ F+T+ LGM +  +         + +L    +   + +++T  
Sbjct: 10  AHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT-- 61

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                     G GH  +     E + +    +       T        G T     + PD
Sbjct: 62  -----EAPEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTF--EYQSPD 114

Query: 230 GYKFELL------------------------ERGPTPEPLCQVMLRVGDLDRAINFYKKA 265
           G+  +LL                         +G   + +  + L   D+    + +++ 
Sbjct: 115 GHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERH 174

Query: 266 FGMEL 270
            G   
Sbjct: 175 LGFRT 179

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 69.9 bits (171), Expect = 1e-13
 Identities = 39/176 (22%), Positives = 61/176 (34%), Gaps = 33/176 (18%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFL-GYGPEDSHFVVELTY 171
             + +V Y V D D    FY +  G++ + +         NA+    G  D H VV+L  
Sbjct: 7   TEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQG-ADEHHVVQLR- 58

Query: 172 NYGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIE 226
                + D         +A     DV      V+A G KV  EP  +   GG     F  
Sbjct: 59  -----RAD-ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRF-F 111

Query: 227 DPDGYKFEL------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMEL 270
            PDG  FE+                  P  +  ++L   +    + F+    G ++
Sbjct: 112 SPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 70.7 bits (172), Expect = 1e-13
 Identities = 48/274 (17%), Positives = 80/274 (29%), Gaps = 46/274 (16%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN---- 172
            V + VG+  +   FY   +G + L  R +                  FV+    N    
Sbjct: 14  SVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNK 73

Query: 173 -YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPD 229
             G      G G       VED    V   + +G K+ REP   +   G    A ++   
Sbjct: 74  EMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYG 133

Query: 230 GYKFELLERG-----------------PTPEPLCQVMLRV----------GDLDRAINFY 262
                L+E+                  P    L +  L +           ++  A  +Y
Sbjct: 134 DTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMVSASEWY 193

Query: 263 KKAFGMELLRKRDNPDYK------YTIAVMGYGPEDKNAVLELTYNHGVT------EYDK 310
            K          D+           +I V  Y    K  + E       +      +Y+ 
Sbjct: 194 LKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKKKSQIQEYVDYNG 253

Query: 311 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 344
           G G   IA+ T+D+      ++  G +    P  
Sbjct: 254 GAGVQHIALKTEDIITAIRHLRERGLEFLSVPST 287

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 67.4 bits (164), Expect = 4e-13
 Identities = 28/182 (15%), Positives = 55/182 (30%), Gaps = 28/182 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             +  +     +LD+ + FYT  LG + + ++           +  G   S        +
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLG--VSQIQFRAAAD 76

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA---FIEDPD 229
                Y I        IA     +    +   G  +T             A   ++EDP 
Sbjct: 77  GTKPFYHIA-----INIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVEDPS 131

Query: 230 GYKFELLERGPTPEP------------LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP 277
           G   EL+ R                  + ++ +   D+++A    K+A     L + +  
Sbjct: 132 GNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIEPA 191

Query: 278 DY 279
             
Sbjct: 192 GL 193

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 67.2 bits (164), Expect = 1e-12
 Identities = 33/205 (16%), Positives = 59/205 (28%), Gaps = 43/205 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++ + V D+     F T+ LG+      D               +   + + +   
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRI--DSRAWRIAVQ-- 52

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGP---VKGGNTVIAFIE 226
                          G  V     +A+  D +K  G  VT         +G   +I F  
Sbjct: 53  -----QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITF-A 106

Query: 227 DPDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGM 268
           DP G   E+                         + L   +  V D D+A+ FY    G 
Sbjct: 107 DPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGF 166

Query: 269 ---ELLRKRDNPDYKYTIAVMGYGP 290
              +++  +  PD       +    
Sbjct: 167 QLSDVIDMKMGPDVTVPAYFLHCNE 191

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 67.4 bits (164), Expect = 1e-12
 Identities = 34/226 (15%), Positives = 63/226 (27%), Gaps = 30/226 (13%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAF---LGYGPEDSHFVVELTYNY 173
           H+   VG   +   FY   LG++L+++    +D  T         G   +          
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 174 GVDKYDIGT-GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
                  G  G   + +    +A     ++      T      + G   + F +DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF-DDPHGLH 126

Query: 233 FELLERGPTPEPLCQ---------------VMLRVGDLDRAINFYKKAFGMELLRKRDNP 277
            E++ER                          L     D+  +  +   G+E + K  + 
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGDF 186

Query: 278 DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD 323
                        +  N +       G  +   G     IA   +D
Sbjct: 187 VR------YRSAGDIGNVIDLKLTPIGRGQMGAG-TVHHIAWRAND 225

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 50.9 bits (121), Expect = 3e-07
 Identities = 23/188 (12%), Positives = 44/188 (23%), Gaps = 17/188 (9%)

Query: 56  LFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRM 115
           L +      +   FG + ++     G  +E          + T  E           +  
Sbjct: 99  LEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTP----DVAIKGF 154

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
                     DKT       +G++ + K                 +  + +       G 
Sbjct: 155 GGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVIDLKLTPIGR 208

Query: 176 DKYDIGTGFGHFGIAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            +   GT   H      D          + + G  VT              +  +     
Sbjct: 209 GQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT---PVRDRNYFNAIYFREHGEIL 264

Query: 233 FELLERGP 240
           FE+    P
Sbjct: 265 FEIATDPP 272

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 63.5 bits (154), Expect = 2e-12
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 8/125 (6%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RR+ H+V  V  +  T  FY++ LGM+++  ++          L +G +  +        
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQKFNLHEVGKEF 79

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDG 230
                + +        I    + + +  +KA    +   P P  G  G  +  +  DPD 
Sbjct: 80  EPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

Query: 231 YKFEL 235
              E+
Sbjct: 140 NLIEV 144

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 42.0 bits (98), Expect = 5e-05
 Identities = 19/115 (16%), Positives = 37/115 (32%), Gaps = 8/115 (6%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           +++ V  +     FY K  GME++  +++         + +G +  N             
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDRKA------LCFGDQKFNLHEVGKEFEPKAA 84

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDG 360
           +          I    + +  + +K     I   P P  G    I +    DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 63.0 bits (153), Expect = 2e-12
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 10/126 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + H+V  V D+  T  FY + LGMK +              L +G +  +   +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGHQKINL-HQLGNE 61

Query: 173 YGVDKYDIGTGFGHF-GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA--FIEDPD 229
           +     ++  G      I    ++  +  V+ +G  +   P    G    I   +  DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 230 GYKFEL 235
           G   E+
Sbjct: 122 GNLIEV 127

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 24/115 (20%), Positives = 36/115 (31%), Gaps = 8/115 (6%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           ++L V D+    NFY+K  GM+ +                   +  N       N  V  
Sbjct: 14  LVLTVADIPTTTNFYEKVLGMKAVSFGAGRIALEFGHQKINLHQLGNEFEPKAQNVRVGS 73

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITA--CLDPDG 360
            D         I    +    + ++  G  I   P    G    IT+    DPDG
Sbjct: 74  ADL------CFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDG 122

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 61.7 bits (150), Expect = 7e-12
 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 6/125 (4%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D D+ + +     G +LL ++        +A L  G      +V  T          
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE--R 238
           G       + V DV +      A G  + +       G      + D +G+ +E     R
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQ-YLVRDLEGHLWEFTRHLR 124

Query: 239 GPTPE 243
              P 
Sbjct: 125 DVPPR 129

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 55.6 bits (134), Expect = 8e-10
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 8/115 (6%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL--TYNHGV 305
           V L   D DRA+++  + FG  LL ++         A +  G      ++ +  T     
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG----GGIVMVRRTGEPYT 60

Query: 306 TEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                G+   Q+ +   DV +       +G  I +     P    +     D +G
Sbjct: 61  VSCAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWGLRQYL-VRDLEG 114

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 59.8 bits (145), Expect = 2e-11
 Identities = 22/116 (18%), Positives = 35/116 (30%), Gaps = 13/116 (11%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              +  +   FY + LGM +        D          P ++H  V      G      
Sbjct: 14  ATPEPARAQAFYGDILGMPVAM------DHGWIVTHA-SPLEAHAQVSFAREGGS----- 61

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
           GT      I V++  +    +   G  +   P     G     F+ DP G    +L
Sbjct: 62  GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL 116

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 13/112 (11%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 308
            +   +  RA  FY    GM +    D+        V    P + +A +         E 
Sbjct: 12  NIATPEPARAQAFYGDILGMPVA--MDHGWI-----VTHASPLEAHAQVSF-----AREG 59

Query: 309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
             G     ++I  D+  +    I  +G  I   P        +     DP G
Sbjct: 60  GSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFG 110

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 10/134 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP----EDSHFVVEL 169
           R+      V D+ K+++FY + LG+++    +     +T A L  G     +    V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEI--PAEADSAPHTEAVLDGGIRLAWDTVETVRSY 60

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
              +                    V K    +   G +   +P     G    A ++DPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPD 119

Query: 230 GYKFELLERGPTPE 243
           G   +L    P P 
Sbjct: 120 GNVVDLFA--PLPL 131

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 48.3 bits (115), Expect = 3e-07
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 8/118 (6%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL-TYNHGV 305
              + V D+ +++ FY +  G+E+    +     +T AV+  G       +E        
Sbjct: 7   LFAVVVEDMAKSLEFY-RKLGVEI--PAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 63

Query: 306 TEYDKGNGYAQIAIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
            +   G     IA        V K    +  +G +   +P        +     DPDG
Sbjct: 64  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDG 120

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 59.4 bits (144), Expect = 2e-11
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 12/116 (10%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 304
           L Q+ + V ++ +     +     +      N  +    A    G    +  L L+ NH 
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKA--DYANDGF----AQFTIG----SHCLMLSQNHL 55

Query: 305 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           V   +  +G   I I  +DV +  + +   G K+   P       T+      P G
Sbjct: 56  VPLENFQSG-IIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAG 109

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 55.2 bits (133), Expect = 8e-10
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 14/126 (11%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRK-RDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            +  +   V ++ +        L  K         +    +  L      +H V    + 
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQ 62

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            G+             I VEDV +    +   G KV   P     G      ++ P G  
Sbjct: 63  SGI----------IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLV 111

Query: 233 FELLER 238
            +    
Sbjct: 112 LDFYRM 117

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 28/180 (15%), Positives = 53/180 (29%), Gaps = 37/180 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++     D+    ++  + LGM   +     E      +L      +  VV     
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVEGKGAP--EGA---LYLRMDDFPARLVVV---- 54

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG---PVKGGNTVIAFIE 226
                          G      E + +  + +  +G             +  + +I F  
Sbjct: 55  -----PGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRF-A 108

Query: 227 DPDGYKFEL-------LERGPTPEP---------LCQVMLRVGDLDRAINFYKKAFGMEL 270
           DP G   E+         R  +P           +  V+L   D   A++FY+   G  L
Sbjct: 109 DPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRL 168

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 23/182 (12%), Positives = 50/182 (27%), Gaps = 25/182 (13%)

Query: 67  HFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLD 126
                + ++     G+ +E      +                 + ++ M HVV    D  
Sbjct: 98  DRRVDEMIRFADPSGNCLEVFHGTALEHRRVV---SPYGHRFVTGEQGMGHVVLSTRDDA 154

Query: 127 KTIKFYTECLGMKL--------LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           + + FY + LG +L               +               H +            
Sbjct: 155 EALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSL-------AFLPM 207

Query: 179 DIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIEDPDGYKF 233
              +G  H  + V   +DV   +D    +   ++   G         +  +++ P G+  
Sbjct: 208 PTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVN--DLMLSFYMKTPGGFDI 265

Query: 234 EL 235
           E 
Sbjct: 266 EF 267

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 57.9 bits (140), Expect = 2e-10
 Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 23/144 (15%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R  + +   V D++++++ Y E  G++  +     +    +      P  +   +   + 
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAF-FE 76

Query: 173 YGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
            G  + ++                 G G  H    V+D+ + V+ +  KG KV ++ G  
Sbjct: 77  LGPLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK-GDF 135

Query: 216 KGGNTVIAFI--EDPDGYKFELLE 237
           +GG    A+I          ELLE
Sbjct: 136 EGGR--YAYIDTLRALKVMIELLE 157

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 44.1 bits (104), Expect = 1e-05
 Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 17/120 (14%)

Query: 244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK---------- 293
              Q+ + V D++ ++  Y + FG+E  +     DY          P             
Sbjct: 19  NTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG 78

Query: 294 NAVLELTYNHG----VTEY--DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 347
              LEL           E+    G G   IA    D+ +  E +   G K+ ++ G   G
Sbjct: 79  PLQLELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK-GDFEG 137

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 60.0 bits (145), Expect = 3e-10
 Identities = 30/256 (11%), Positives = 71/256 (27%), Gaps = 43/256 (16%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + ++   V +LD    +    +GM++     + +      +L       H  + L   
Sbjct: 5   TELGYLGLSVSNLDAWRDYAAGIMGMQV-----VDDGEDDRIYLRMD--RWHHRIVLH-- 55

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR---EPGPVKGGNTVIAFIE 226
                 D      + G  V    ++ +  + +K  G             +    ++    
Sbjct: 56  -----ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKL-H 109

Query: 227 DPDGYKFELL-------------------ERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           DP G   E+                    +     + L  +++R  D++ A  FY+    
Sbjct: 110 DPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGL 169

Query: 268 MELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT 327
              +  +           +     D++  L              N         DD+   
Sbjct: 170 EGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVGPMDKRI---NHLMIEYTHLDDLGYA 226

Query: 328 AEAIKLSGGKITREPG 343
            + ++     +T + G
Sbjct: 227 HDLVRQQKIDVTLQIG 242

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 50.4 bits (120), Expect = 4e-07
 Identities = 25/186 (13%), Positives = 60/186 (32%), Gaps = 17/186 (9%)

Query: 57  FQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRML 116
           F++ +    +       +KL    G+  E      +  +S     + +     ++ + + 
Sbjct: 89  FEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLG 148

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN--AFLGYGPEDSHFVVELTYNYG 174
           H++ R  D+++  +FY        +  +    +       F+       H +        
Sbjct: 149 HIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCND-RHHSLA------- 200

Query: 175 VDKYDIGTGFGHFGIAVE---DVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIEDPD 229
                +     H  I      D+    DLV+ +   VT + G         +  +  +P 
Sbjct: 201 FGVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSN--DEALTFYCANPS 258

Query: 230 GYKFEL 235
           G+ +E 
Sbjct: 259 GWLWEP 264

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 58.9 bits (142), Expect = 5e-10
 Identities = 25/204 (12%), Positives = 60/204 (29%), Gaps = 41/204 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ ++ + V D+     F T+ +G+               A      +   + + +   
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRA--DQRAWRIAVQ-- 52

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--ED 227
                        + G+ V     + +  D ++  G   TR    +     V+  +  +D
Sbjct: 53  -----PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQD 107

Query: 228 PDGYKFEL------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGM- 268
           P G   E+                         + +   +  V D  +A+ FY +  G  
Sbjct: 108 PFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFV 167

Query: 269 --ELLRKRDNPDYKYTIAVMGYGP 290
             +++  +  P+       +    
Sbjct: 168 LSDIIDIQMGPETSVPAHFLHCNG 191

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 50.8 bits (121), Expect = 2e-07
 Identities = 34/173 (19%), Positives = 53/173 (30%), Gaps = 16/173 (9%)

Query: 69  FGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDWVKSDKRRMLHVVYRVGDLDKT 128
                L L    G  +E    G              +    +  + + H V  V D  K 
Sbjct: 98  KVMGLLCLQDPFGLPLEIYY-GPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKA 156

Query: 129 IKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG 185
           + FYTE LG  L   +  +  PE      FL       H +        +  + I     
Sbjct: 157 MAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG-RHHTIA-------LAAFPIPKRIH 208

Query: 186 HFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           HF +     +DV    D + A  G++T   G      T+  + + P       
Sbjct: 209 HFMLQANTIDDVGYAFDRLDAA-GRITSLLGRHTNDQTLSFYADTPSPMIEVE 260

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 59.6 bits (143), Expect = 6e-10
 Identities = 45/290 (15%), Positives = 87/290 (30%), Gaps = 60/290 (20%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+  + 
Sbjct: 28  HIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLS 87

Query: 177 KYDI-----------------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP- 212
             +I                       G G     I VED      +  A G   +  P 
Sbjct: 88  AGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPI 147

Query: 213 --------GPVKG-GNTVIAFIE-----------DPDGYKFELLERGPTP---EPLCQVM 249
                     VK  G+ V+ ++             P   + E     P       L   +
Sbjct: 148 VLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRLDHAV 207

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMG----YGPEDKNAVLELTYNHGV 305
             V +L  A+ +     G     +    D     + +        ++   +      HG 
Sbjct: 208 GNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGT 267

Query: 306 T---------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP 346
                     E+++G G   +A+ ++D+++T   ++        +  P P
Sbjct: 268 KRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP 317

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 58.9 bits (142), Expect = 6e-10
 Identities = 34/262 (12%), Positives = 74/262 (28%), Gaps = 55/262 (20%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
             + ++   V D D    F T+ LG+++L + +  +DR    +L    +  H  + +   
Sbjct: 8   IELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KDR---FYLRM--DYWHHRIVVH-- 58

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTR---EPGPVKGGNTVIAFIE 226
                ++      + G  V    +       +   G K+          +    ++   E
Sbjct: 59  -----HNGQDDLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKT-E 112

Query: 227 DPDGYKFEL-------------------LERGPTPEPLCQVMLRVGDLDRAINFYKKAFG 267
           DP G   E+                    +     + L   ++R  D+  A  FY     
Sbjct: 113 DPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSLLG- 171

Query: 268 MELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH------GVTEYDKGNGYAQIAIGT 321
               R             +  G   + + +             +    + N         
Sbjct: 172 ---FRGDV-----EYRIPLPNGMTAELSFMHCNARDHSIAFGAMPAAKRLNHLMLEYTHM 223

Query: 322 DDVYKTAEAIKLSGGKITREPG 343
           +D+  T +    +   I  + G
Sbjct: 224 EDLGYTHQQFVKNEIDIALQLG 245

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 44.6 bits (105), Expect = 3e-05
 Identities = 26/188 (13%), Positives = 49/188 (26%), Gaps = 21/188 (11%)

Query: 57  FQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQNVLDW-VKSDKRRM 115
            ++   +          +K     G+  E    G     SN       L     +  + +
Sbjct: 92  IRICDKVEAQERMVLGLMKTEDPGGNPTEIFW-GPRIDMSNPFHPGRPLHGKFVTGDQGL 150

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKL---LRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            H + R  D+ +  KFY+  LG +     R           +F+       H +      
Sbjct: 151 GHCIVRQTDVAEAHKFYSL-LGFRGDVEYRIPLPNGMTAELSFMHCNA-RDHSIA----- 203

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPG--PVKGGNTVIAFIED 227
                        H  +     ED+  T          +  + G         +  +   
Sbjct: 204 --FGAMPAAKRLNHLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHAN--DKALTFYGAT 259

Query: 228 PDGYKFEL 235
           P G+  E 
Sbjct: 260 PSGWLIEP 267

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 57.6 bits (138), Expect = 2e-09
 Identities = 49/275 (17%), Positives = 83/275 (30%), Gaps = 48/275 (17%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            VV+ VG+  +   +Y+   GM+L+            A        + FV+         
Sbjct: 25  AVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATP 84

Query: 177 KYDI--------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP--GPVKGGNTVIAFIE 226
                       G G     I V D           G +   EP     + G  V+A I 
Sbjct: 85  WGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIA 144

Query: 227 DPDGYKFELLERG--------------PTPEPLCQVMLRV----------GDLDRAINFY 262
                +  L++R               P  EP      +           G ++  + FY
Sbjct: 145 TYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFY 204

Query: 263 KKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVTEYDK---------- 310
            K  G   +++    D   +Y+ A+M     D    ++   N       K          
Sbjct: 205 NKVMGFTNMKEFVGDDIATEYS-ALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFY 263

Query: 311 -GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 344
            G G   IA+ T D+ +T   ++ +G +    P  
Sbjct: 264 GGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDS 298

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 53.6 bits (128), Expect = 5e-09
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 15/133 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            V++ V +  K+ +FY   L  + +         +    +  G       + L     ++
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPIES----SPTFAMFVMKTG-----LRLGLWAQEEIE 59

Query: 177 -KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            K     G       V   E V +       K   + + P  +  G T      DPD ++
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FVGVDPDEHR 117

Query: 233 FELLERGPTPEPL 245
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 45.5 bits (107), Expect = 4e-06
 Identities = 16/118 (13%), Positives = 34/118 (28%), Gaps = 15/118 (12%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
            V+  V +  ++  FYK     +      +P +    A+           L L     + 
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQ--PIESSPTF----AMFVMKT---GLRLGLWAQEEIE 59

Query: 307 EY-DKGNGYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
               +  G  +++      + V +           I + P  +          +DPD 
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDF--GYTFVGVDPDE 115

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 53.1 bits (127), Expect = 8e-09
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 15/123 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
             +  V +   + +FY   LG+  +         ++   L  G       + L   + V+
Sbjct: 28  FTILYVDNPPASTQFYKALLGVDPVES----SPTFSLFVLANG-----MKLGLWSRHTVE 78

Query: 177 -KYDIGTGFGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
            K  +  G G     VE+   V +T    KA G  + ++P  ++ G T      DPD ++
Sbjct: 79  PKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTF--TAADPDSHR 136

Query: 233 FEL 235
             +
Sbjct: 137 LRV 139

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 47.7 bits (113), Expect = 6e-07
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 18/128 (14%)

Query: 238 RGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVL 297
           +G    P    +L V +   +  FYK   G++      +P +    ++           L
Sbjct: 20  QGHMTHPD-FTILYVDNPPASTQFYKALLGVD--PVESSPTF----SLFVLAN---GMKL 69

Query: 298 ELTYNHGVT-EYDKGNGYAQIAI---GTDDVYKTAEAIKLSGGKITREPGPLP-GINTKI 352
            L   H V  +     G  ++A        V +T    K SG  + ++P  +  G     
Sbjct: 70  GLWSRHTVEPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYTFTA 129

Query: 353 TACLDPDG 360
               DPD 
Sbjct: 130 A---DPDS 134

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 2e-08
 Identities = 50/310 (16%), Positives = 93/310 (30%), Gaps = 101/310 (32%)

Query: 17  TYNKTSLPSQSSLK-LSPFCVNNDGGNNISYCYSTSRRLALFQLGAAIPQSHFFGAKALK 75
             +K +   +SSL  L P              +    RL++F   A IP         L 
Sbjct: 351 NCDKLTTIIESSLNVLEP--------AEYRKMF---DRLSVFPPSAHIP------TILLS 393

Query: 76  LLRAEGSTIEASTSGNMAPTSNTVTEQNV----------LDW-VKSDKRRMLHVVYRVGD 124
           L+  +    +     N     + V +Q            L+  VK +    LH       
Sbjct: 394 LIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH------- 446

Query: 125 LDKTIKFYTECLGMKLLRKRD------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
               +  Y       + +  D         D+Y  + +G+     H          ++  
Sbjct: 447 -RSIVDHY------NIPKTFDSDDLIPPYLDQYFYSHIGH-----HL-------KNIEHP 487

Query: 179 DIGTGFGH-FGIAVEDVAKTVDL--VKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +  T F   F          +D   ++    K+  +        +++  ++    YK  +
Sbjct: 488 ERMTLFRMVF----------LDFRFLEQ---KIRHDSTAWNASGSILNTLQQLKFYKPYI 534

Query: 236 LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT----IAVMGYGPE 291
            +  P  E L      V  +   ++F  K     L+        KYT    IA+M     
Sbjct: 535 CDNDPKYERL------VNAI---LDFLPKI-EENLIC------SKYTDLLRIALM----A 574

Query: 292 DKNAVLELTY 301
           +  A+ E  +
Sbjct: 575 EDEAIFEEAH 584

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 5e-04
 Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 52/198 (26%)

Query: 191 VEDVAKTVDLVKAKGGKVTREPGPV------------KGGNTVIAFIED---PDGYKFEL 235
           V+D+ K++ L K +   +      V            K    V  F+E+    + YKF L
Sbjct: 38  VQDMPKSI-LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN-YKF-L 94

Query: 236 LERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMELLR-KRDNPDY-KYTIAVMGYGPED- 292
           +             ++      ++    + +  +  R   DN  + KY +       +  
Sbjct: 95  MSP-----------IKTEQRQPSMM--TRMYIEQRDRLYNDNQVFAKYNV----SRLQPY 137

Query: 293 ---KNAVLELTYNHGVTEY-DKGNGYAQIAIGTDDVYKTAEAIKLSGGKI-------TRE 341
              + A+LEL     V      G+G   +A+   DV  + +       KI          
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKTWVAL---DVCLSYKVQCKMDFKIFWLNLKNCNS 194

Query: 342 PGPLPGINTKITACLDPD 359
           P  +  +  K+   +DP+
Sbjct: 195 PETVLEMLQKLLYQIDPN 212

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 11/123 (8%), Positives = 37/123 (30%), Gaps = 3/123 (2%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 308
           +    D+D+ + ++++  G        + +       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVD 367
            +        +  + +    + +K +G     +    P G   +  +    DG    F +
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG--ARECSITTTDGCILRFFE 143

Query: 368 NLD 370
           ++ 
Sbjct: 144 SIQ 146

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 47.0 bits (111), Expect = 9e-07
 Identities = 21/119 (17%), Positives = 33/119 (27%), Gaps = 1/119 (0%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           VY   D+DKT+K++ E LG          E       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE 237
                     + +E +      VK  G     +      G    + I   DG      E
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITTTDGCILRFFE 143

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 18/125 (14%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
             +  V +++++  FY      + +        RY               +   ++ G +
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKEPVFVT----PRYVAFPSSGD------ALFAIWSGGEE 65

Query: 177 KYDIGTGFGHFGIAVEDVA------KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
                  F   GI +                K+    V +EP     G T    I DPDG
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTF--LISDPDG 123

Query: 231 YKFEL 235
           +   +
Sbjct: 124 HIIRV 128

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 44.6 bits (105), Expect = 5e-06
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 20/121 (16%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
             ++ V +++R+ +FY+  F  E       P Y                 L   ++ G  
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKE--PVFVTPRY----VAFPSS----GDALFAIWSGGEE 65

Query: 307 EYDKGNGYAQIAIGT------DDVYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPD 359
              +   +++I I        D ++      K     + +EP     G    I+   DPD
Sbjct: 66  PVAEIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFGRTFLIS---DPD 122

Query: 360 G 360
           G
Sbjct: 123 G 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 16/121 (13%), Positives = 30/121 (24%), Gaps = 15/121 (12%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
            + D+ + +  + + LG +L  +          A+L         + E       D    
Sbjct: 14  HIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIPD---- 63

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAK----GGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
           G       I V D+      +                 +  G      +  PDG      
Sbjct: 64  GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMPDGDWLNFT 122

Query: 237 E 237
            
Sbjct: 123 A 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 18/116 (15%), Positives = 28/116 (24%), Gaps = 15/116 (12%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 308
            L + D+  A+  +    G EL  +  N    Y    +          L L         
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHSN----YAYLELS------GCGLRLLEEPARKII 61

Query: 309 DKGNGYAQIAIGTDDVYKTAEAIK----LSGGKITREPGPLPGINTKITACLDPDG 360
             G     I I   D+      +                 +P    +      PDG
Sbjct: 62  PDGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMP-YGQREFQVRMPDG 116

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 20/128 (15%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
                D D T  FY   LG  ++ +            L  G     F       +     
Sbjct: 8   NLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHPGL 53

Query: 179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGG------NTVIAFIEDPDGYK 232
           D    +    + ++D+A+     K+ G + T    P             +A + DPDG  
Sbjct: 54  DPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTL 113

Query: 233 FELLERGP 240
             L++   
Sbjct: 114 LRLIQNEL 121

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 20/117 (17%)

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYD 309
           L   D D    FY++  G  ++    +  +     ++  G    + +LE   + G    D
Sbjct: 9   LPSRDFDSTAAFYER-LGFGIV--FRDAGW----MILQRG----DLMLEFFAHPG---LD 54

Query: 310 KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI------NTKITACLDPDG 360
               +    +  DD+ +     K  G + T    P             + A +DPDG
Sbjct: 55  PLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDG 111

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis} Length = 357

 Score = 47.1 bits (111), Expect = 5e-06
 Identities = 38/272 (13%), Positives = 72/272 (26%), Gaps = 54/272 (19%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT-------NAFLGYGPEDSHFVVEL 169
           +V   V +L+     + +     +       + R            L     D H     
Sbjct: 8   YVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAY 67

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
              +G    DI        +A  DVA   +     G +  R PG         A I    
Sbjct: 68  LQTHGDGVADIA-------MATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFG 120

Query: 230 GYKFELLERG------------------PTPEPLCQVML-------RVGDLDRAINFYKK 264
                L++R                        +  + +         GDL   + +Y++
Sbjct: 121 DVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYER 180

Query: 265 AFGME------------LLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGN 312
           A G               +           + +    P+      +        +  +G 
Sbjct: 181 ALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNA---DPGQIDEFLKDHQGA 237

Query: 313 GYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 344
           G   IA  ++D  +  +A+   G +  + PG 
Sbjct: 238 GVQHIAFNSNDAVRAVKALSERGVEFLKTPGA 269

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 45.0 bits (106), Expect = 6e-06
 Identities = 19/136 (13%), Positives = 32/136 (23%), Gaps = 11/136 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLL-------RKRDIPEDRYTNAFLGYGPEDSHFVVEL 169
            ++     +   + FY    G           RK D       ++ L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +          G+G   F +  +D    V      G                   + DP 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 146

Query: 230 GYKFELLERG--PTPE 243
           G  +   E+    T E
Sbjct: 147 GVTWIFAEKKTVITDE 162

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 18/120 (15%), Positives = 32/120 (26%), Gaps = 9/120 (7%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT-------IAVMGYGPEDKNAVLELT 300
           +++    +  A+ FYK AFG         P  K          + +         V +++
Sbjct: 30  LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDVS 88

Query: 301 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
              G +            +GT D          +G            +        DP G
Sbjct: 89  SLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELG-FKGKVTDPFG 147

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3 Length = 357

 Score = 46.3 bits (109), Expect = 1e-05
 Identities = 40/254 (15%), Positives = 68/254 (26%), Gaps = 44/254 (17%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLL-RKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
            + +           + E +G   +   R      Y          + + ++    N   
Sbjct: 15  FIEFASPTPGTLEPIF-EIMGFTKVATHRSKNVHLYRQG-------EINLILNNEPNSIA 66

Query: 176 DKYDIGTGFG--HFGIAVEDVAKTVDLVKAKGGKVTRE---------PGPVKGGNTVIAF 224
             +    G         V+D  K  +     G +             P     G   +  
Sbjct: 67  SYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHIDTGPMELNLPAIKGIGGAPLYL 126

Query: 225 IEDPDGYK----FELLERGPTPEPLCQVMLRV----------GDLDRAINFYKKAFGMEL 270
           I+           + +             L+V          G +    NFY+K F    
Sbjct: 127 IDRFGEGSSIYDIDFVYLEGVERNPVGAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFRE 186

Query: 271 LRKRDNPDYKYTI---AVMGYGPEDKNAVLELTYNHG---VTEY---DKGNGYAQIAIGT 321
            R  D    +YT      M          L    + G   + E+     G G   +A  T
Sbjct: 187 ARYFDIKG-EYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEGIQHVAFLT 245

Query: 322 DDVYKTAEAIKLSG 335
           DD+ KT +A+K  G
Sbjct: 246 DDLVKTWDALKKIG 259

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A Length = 122

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 18/121 (14%), Positives = 30/121 (24%), Gaps = 24/121 (19%)

Query: 119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY 178
           V    D+   + F+ + LG +     D  +  +  A +  G    H           +  
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEK----DFGDRDF--AGVRRGDIRLHI-------SRTEHQ 56

Query: 179 DIGTGFGHFGIAVEDV--------AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
            +      + I V D                    G      G    G      + DP G
Sbjct: 57  IVADNTSAW-IEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREF--AVRDPAG 113

Query: 231 Y 231
            
Sbjct: 114 N 114

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 38.4 bits (89), Expect = 8e-04
 Identities = 16/120 (13%), Positives = 29/120 (24%), Gaps = 8/120 (6%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D+ + ++F+T+ LG          ED +  A +                   +    
Sbjct: 12  TARDVAEAVEFWTDRLGFSR----VFVEDDF--AGVVRDDVTLFISAVQDQVVPDNTQAW 65

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP 240
               G   +  E         +   G    E      G      + DP G     +    
Sbjct: 66  VWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGREF--ALRDPAGNCVHFVAEEQ 123

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	376
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	100.0
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	100.0
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	100.0
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	100.0
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	100.0
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.98
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.98
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.98
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.97
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.97
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.97
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.97
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.97
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.96
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.94
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.92
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.91
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.9
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.81
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.79
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.79
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.79
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.79
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.79
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.78
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.78
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.76
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.76
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.76
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.76
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.75
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.75
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.75
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.75
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.74
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.74
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.74
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.74
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.74
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.72
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.72
3ghj_A	141	Putative integron gene cassette protein; integron	99.72
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.72
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.72
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.72
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.71
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.71
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.71
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.71
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.71
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.71
2i7r_A	118	Conserved domain protein; structural genomics cons	99.71
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.71
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.7
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.7
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.7
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.7
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.7
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.7
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.69
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.69
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.68
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.68
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.68
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.68
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.68
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.68
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.67
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.67
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.67
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.66
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.66
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.66
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.66
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.66
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.66
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.66
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.66
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.66
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.66
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.66
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.65
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.65
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.64
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.64
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.64
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.64
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.63
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.63
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.63
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.63
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.62
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.62
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.62
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.61
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.61
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.6
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.6
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.6
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
2i7r_A	118	Conserved domain protein; structural genomics cons	99.6
3ghj_A	141	Putative integron gene cassette protein; integron	99.6
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.6
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.59
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.59
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.59
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.59
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.59
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.58
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.57
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.57
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.57
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.56
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.56
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.56
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.55
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.55
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.54
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.54
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.54
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.54
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.53
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.53
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.53
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.52
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.52
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.51
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.51
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.51
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.51
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.51
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.51
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.5
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.47
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.47
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.4
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.4
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.37
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.37
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.34
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.31
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.26
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.25
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.22
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.21
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.17
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.08
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.07
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.06
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.0
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.99
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.97
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	98.96
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.92
1tsj_A	139	Conserved hypothetical protein; structural genomic	98.92
3l20_A	172	Putative uncharacterized protein; hypothetical pro	98.85
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.45
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.23
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.12
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	97.66
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.14
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	96.91
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	84.04
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	81.61

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=5.1e-34  Score=271.13  Aligned_cols=248  Identities=31%  Similarity=0.585  Sum_probs=195.6

Q ss_pred             cccccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC-----------CCceEEEEEeeCCCCceEEEEEEecCCC
Q 017144          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-----------EDRYTNAFLGYGPEDSHFVVELTYNYGV  175 (376)
Q Consensus       107 ~~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~l~l~~~~~~  175 (376)
                      +.+|+.++|.||+|.|+|++++++||+++|||++..+...+           ++.+..+++.+++......+++....+.
T Consensus        20 ~~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~   99 (330)
T 3zi1_A           20 FQSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGV   99 (330)
T ss_dssp             GGGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTC
T ss_pred             eeecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCC
Confidence            34566789999999999999999999999999998877655           4456678888876656778888876655


Q ss_pred             CCCCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC-CCCCccccccccCC
Q 017144          176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-TPEPLCQVMLRVGD  254 (376)
Q Consensus       176 ~~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~-~~~~~~~v~L~v~D  254 (376)
                      ..+..+.|+.|++|.|+|+   .++++++|+++...|    .   ..+||+||||+.|||++... .+.++.|+.|.|.|
T Consensus       100 ~~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~---~~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~D  169 (330)
T 3zi1_A          100 GDYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA----E---GVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSD  169 (330)
T ss_dssp             CCCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE----T---TEEEEECTTSCEEEEESSCCTTSCSEEEEEEEESC
T ss_pred             CccccCCCeeEEEEECchH---HHHHHHcCCceeccC----C---ceEEEECCCCCEEEEEecCCCCCCceeEEEEECCC
Confidence            5566677999999999987   667888999987543    1   27889999999999998764 46789999999999


Q ss_pred             hhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC--CHHHHHHHHH
Q 017144          255 LDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD--DVYKTAEAIK  332 (376)
Q Consensus       255 ~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~--Dl~~~~~~l~  332 (376)
                      ++++.+||+++|||++.......+    ..++..++.  ...+++....+  ....+.+++|++|.|+  |+++++++|+
T Consensus       170 l~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl~  241 (330)
T 3zi1_A          170 LQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLMK  241 (330)
T ss_dssp             HHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHHH
Confidence            999999999999999987654332    244555432  45666654432  2334567889999995  7999999999


Q ss_pred             HcCCeeecCCccC--CC-CCceEEEEECCCCCeEEEEeccccc
Q 017144          333 LSGGKITREPGPL--PG-INTKITACLDPDGWKSVFVDNLDFL  372 (376)
Q Consensus       333 ~~G~~~~~~p~~~--~~-~~~~~~~~~DPdG~~iel~~~~~~~  372 (376)
                      ++|+++..++.+.  ++ ...+++||+|||||.|||++..+|.
T Consensus       242 ~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          242 RENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             HTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             HcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence            9999988776542  21 1248999999999999999998765

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=100.00  E-value=4.2e-32  Score=258.92  Aligned_cols=241  Identities=13%  Similarity=0.134  Sum_probs=184.9

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      ..+++|+||.|.|+|++++++||+++|||++..+.+      ..+++.......++.+.+...       ...++.|++|
T Consensus         7 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~g~~~~af   73 (339)
T 3lm4_A            7 FDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKITEA-------PEAGMGHAAM   73 (339)
T ss_dssp             GSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEET------TEEEEECTTCSSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecC------CEEEEEecCCCCceEEEEeeC-------CCCCcceEEE
Confidence            356799999999999999999999999999987643      235555532322334555443       1357899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC------------------------CC
Q 017144          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP------------------------TP  242 (376)
Q Consensus       190 ~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~------------------------~~  242 (376)
                      .|+|   +++++++|+++|+++...|.  ..+.++.++|+|||||.|||+....                        .+
T Consensus        74 ~v~~~~dld~~~~~l~~~G~~~~~~~~--~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  151 (339)
T 3lm4_A           74 RTSSPEALERRAKSLTDGNVDGTWSED--QFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGIPV  151 (339)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEECC--STTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSSCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCceeeccC--CCCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCCCc
Confidence            9998   88899999999999877665  2345788999999999999985421                        12


Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .+++|+.|.|.|++++.+||+++|||++..... +++.....++..+..  .+.+.+....    .....+++|++|.|+
T Consensus       152 ~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~----~~~~~~~~Hiaf~v~  224 (339)
T 3lm4_A          152 KRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDM----TGGHGKLHHLAFFYG  224 (339)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECT----TSCCSEEEEEEEECC
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccC----CCCCCceeEEEEEeC
Confidence            458999999999999999999999999987654 333345566665432  3445554321    123457899999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccccc
Q 017144          323 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  372 (376)
Q Consensus       323 D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  372 (376)
                      |   +++++++|+++|+++.++|+++..+..+++||+||+||.|||+...+..
T Consensus       225 d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~~~  277 (339)
T 3lm4_A          225 TGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAGYL  277 (339)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCCCC
T ss_pred             CHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCCee
Confidence            9   8889999999999999999887766568899999999999998665443

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=100.00  E-value=1.1e-31  Score=252.68  Aligned_cols=238  Identities=16%  Similarity=0.159  Sum_probs=179.0

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEee-CCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY-GPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~-g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      .+++|+||.|.|+|++++++||+++|||++..+..  +   ..+++.. +.. .++.+.+.+.       ...++.|++|
T Consensus         5 ~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~---~~~~l~~~~~~-~~~~l~l~~~-------~~~~~~h~a~   71 (309)
T 3hpy_A            5 GVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--Q---GRVYFKCWDER-DHSCYIIREA-------DTAGIDFFGF   71 (309)
T ss_dssp             SEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--T---SCEEEECTTCC-BSCSEEEEEC-------SSCEEEEEEE
T ss_pred             ccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--C---CeEEEEeccCC-CceEEEEEeC-------CCCceeEEEE
Confidence            45799999999999999999999999999986642  1   2345554 332 2234555443       1257899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC----------------------CCCC
Q 017144          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEP  244 (376)
Q Consensus       190 ~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~----------------------~~~~  244 (376)
                      .|+|   +++++++|+++|+++...|.....+.++.+||+|||||.|||++...                      .+..
T Consensus        72 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  151 (309)
T 3hpy_A           72 KVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQ  151 (309)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCCSE
T ss_pred             EECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCcccce
Confidence            9997   88999999999999876554322346789999999999999996432                      1234


Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCC-CCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      ++|+.|.|+|++++.+||+++|||++......+. +.....++..++.  .+.+.+...      ....+.+|++|.|+|
T Consensus       152 i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~Hiaf~v~d  223 (309)
T 3hpy_A          152 LDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEY------PEKGKLHHCSFLLES  223 (309)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEEC------SSTTEEEEEEEECSS
T ss_pred             eeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecC------CCCCceeEEEEECCC
Confidence            8999999999999999999999999976654332 3345566665432  233333321      123468999999987


Q ss_pred             HH---HHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          324 VY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       324 l~---~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ++   +++++|+++|+++..+|++++.+..+++|++|||||.|||....
T Consensus       224 ~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          224 WEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             HHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            65   46789999999999888877765568899999999999998774

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=100.00  E-value=8.5e-32  Score=255.08  Aligned_cols=238  Identities=20%  Similarity=0.208  Sum_probs=182.2

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  188 (376)
                      .++.++++||.|.|+|++++++||+++|||++..+.+      ..+++.......++.+.+.+.       ...++.|++
T Consensus        12 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~   78 (323)
T 1f1u_A           12 APDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG-------PIAAVAAFA   78 (323)
T ss_dssp             CCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEE
T ss_pred             CcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEEC-------CCCCeeEEE
Confidence            4567899999999999999999999999999976542      245665433222344555543       125788999


Q ss_pred             EEe---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC---------------CCCcccccc
Q 017144          189 IAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVML  250 (376)
Q Consensus       189 f~V---~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~---------------~~~~~~v~L  250 (376)
                      |.|   +|+++++++|+++|+++...|.....+.++.++|.||+|+.|||++....               ..+++|+.|
T Consensus        79 f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv~l  158 (323)
T 1f1u_A           79 YRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQ  158 (323)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEEEE
T ss_pred             EEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeEEE
Confidence            999   67999999999999998776652222356788999999999999965321               235899999


Q ss_pred             ccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHH---H
Q 017144          251 RVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK---T  327 (376)
Q Consensus       251 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~---~  327 (376)
                      .|+|++++.+|| ++|||++......+++.....++..+..  ++.+.+...       .+++++|++|.|+|+++   +
T Consensus       159 ~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~-------~~~~~~Hiaf~v~d~d~v~~~  228 (323)
T 1f1u_A          159 VTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFATHEKHNIIQI  228 (323)
T ss_dssp             EESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHHHHHHH
T ss_pred             ecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCC-------CCCCceEEEEECCCHHHHHHH
Confidence            999999999999 9999999876554444445566665332  333444321       13488999999999988   9


Q ss_pred             HHHHHHcCC--eeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          328 AEAIKLSGG--KITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       328 ~~~l~~~G~--~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +++|+++|+  ++.++|+++..+..+++|++||+||.|||+...
T Consensus       229 ~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          229 CDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             HHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            999999999  999888887766568899999999999998643

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=100.00  E-value=2.2e-31  Score=255.86  Aligned_cols=237  Identities=19%  Similarity=0.183  Sum_probs=185.9

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      .+++|+||.|.|+|++++++||+++|||+++.+.+      ..++++++....++.+.+.+.       ...++.|++|.
T Consensus        14 ~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a~~   80 (365)
T 4ghg_A           14 DILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAALKAMAFR   80 (365)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             CCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCCcceEEEE
Confidence            46799999999999999999999999999987754      456777765544555666553       23588999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC---------------CCCcccccccc
Q 017144          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVMLRV  252 (376)
Q Consensus       191 V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~---------------~~~~~~v~L~v  252 (376)
                      |.+   ++++.++|+++|+++...+.....+.++.++|.||||+.|||+.....               +.+++|+.|.|
T Consensus        81 v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~v  160 (365)
T 4ghg_A           81 VRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVT  160 (365)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEEE
T ss_pred             eCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEee
Confidence            986   778899999999998765544434466789999999999999853321               24589999999


Q ss_pred             CChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHH---HHH
Q 017144          253 GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK---TAE  329 (376)
Q Consensus       253 ~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~---~~~  329 (376)
                      .|++++.+||++ |||++++....+.+.....|+..+..  ++.+.+..       ..+++++|++|+|+|+++   +.+
T Consensus       161 ~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~~-------~~~~~lhHvaf~v~d~d~v~~~~d  230 (365)
T 4ghg_A          161 PDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALTG-------GNGPRLHHVAFSTHEKHNIIQICD  230 (365)
T ss_dssp             SCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEECSSHHHHHHHHH
T ss_pred             cCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc--ccceeeec-------CCCCceeEEEEecCCHHHHHHHHH
Confidence            999999999965 99999887766666677778876543  33333332       124689999999988665   667


Q ss_pred             HHHHcCCe--eecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          330 AIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       330 ~l~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +|+++|+.  +.++|++|..++..++||+||+|+.||+.....
T Consensus       231 ~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          231 KMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             HHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             HHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCc
Confidence            88889974  678999998777789999999999999977654

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=100.00  E-value=1.2e-30  Score=248.10  Aligned_cols=248  Identities=13%  Similarity=0.090  Sum_probs=177.9

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC-CceEEEEEeeCCCCceEEEEEEecCCCCCCC-CCCCceEE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYD-IGTGFGHF  187 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~-~~~g~~hi  187 (376)
                      +++.+|+||+|.|+|++++++||+++|||++..+....+ .....++++.........+++......+... ...++.|+
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hi   83 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVT   83 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEE
Confidence            356799999999999999999999999999988754332 2222344443332223467776654332222 23468899


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC---------------CCCcccccc
Q 017144          188 GIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT---------------PEPLCQVML  250 (376)
Q Consensus       188 ~f~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~---------------~~~~~~v~L  250 (376)
                      +|.|+  |+++++++|+++|+++..  .+.  ++.+.+||+|||||.|||++..+.               ...++|+.|
T Consensus        84 af~V~~~dl~~~~~rL~~~Gv~~~~--~~~--~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L  159 (335)
T 3oaj_A           84 SYVVPKGAMAFWEKRLEKFNVPYTK--IER--FGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATL  159 (335)
T ss_dssp             EEEECTTCHHHHHHHHHHTTCCCEE--EEE--TTEEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhCcceeee--ecc--CCcEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEE
Confidence            99999  999999999999998864  222  367899999999999999986532               124899999


Q ss_pred             ccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCC-CceeEEEEEeCC---HHH
Q 017144          251 RVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKG-NGYAQIAIGTDD---VYK  326 (376)
Q Consensus       251 ~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g-~g~~hiaf~V~D---l~~  326 (376)
                      .|+|++++.+||+++|||++.....    ... . +..+..  +..+.+....+......+ .+++|+||.|+|   +++
T Consensus       160 ~v~Dle~t~~FY~~vLG~~~~~~~~----~~~-~-~~~g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~l~~  231 (335)
T 3oaj_A          160 LSEQPDKTADLLENIMGLERVGKEG----DFV-R-YRSAGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDEDQLD  231 (335)
T ss_dssp             ECSSHHHHHHHHHHTSCCEEEEEET----TEE-E-EECSSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHHHHH
T ss_pred             EECCHHHHHHHHHHHhCCEEeeccC----CEE-E-EEeCCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHHHHH
Confidence            9999999999999999999986532    122 2 222221  344555443222112233 368999999998   667


Q ss_pred             HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec-cccc
Q 017144          327 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN-LDFL  372 (376)
Q Consensus       327 ~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~-~~~~  372 (376)
                      +.++|+++|+++... .++.+  .+.+||+||+|+.|||... ++|.
T Consensus       232 ~~~~L~~~G~~~~~~-~~r~~--~~siYfrDP~G~~iEl~td~pgf~  275 (335)
T 3oaj_A          232 WQRYIASHGYGVTPV-RDRNY--FNAIYFREHGEILFEIATDPPGFA  275 (335)
T ss_dssp             HHHHHHHTTCCCCCC-EECSS--SEEEEEECTTSCEEEEEESCSCTT
T ss_pred             HHHHHHHCCCCcccc-ccCCc--EEEEEEECCCCcEEEEEeCCCCCC
Confidence            899999999986533 33333  3789999999999999987 4664

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=5.7e-31  Score=248.00  Aligned_cols=235  Identities=20%  Similarity=0.303  Sum_probs=180.6

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      +++++|+|+.|.|+|++++++||+++|||++..+.+      ..+++..+....+..+.+.+.       ...++.|++|
T Consensus         4 ~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~~~   70 (310)
T 3b59_A            4 SRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVVQLRRA-------DENRIDVIAL   70 (310)
T ss_dssp             CCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSEEEEEC-------SSCEEEEEEE
T ss_pred             eecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEEEEEEC-------CCCCeeEEEE
Confidence            456799999999999999999999999999976542      235666544101234555543       1357889999


Q ss_pred             Ee---CCHHHHHHHHHHcCCeeecCCee--cCCCCeEEEEEEcCCCCEEEEeecCCC------------CCCcccccccc
Q 017144          190 AV---EDVAKTVDLVKAKGGKVTREPGP--VKGGNTVIAFIEDPDGYKFELLERGPT------------PEPLCQVMLRV  252 (376)
Q Consensus       190 ~V---~d~d~~~~rl~~~G~~i~~~p~~--~~~~~~~~~~~~DPdG~~iel~~~~~~------------~~~~~~v~L~v  252 (376)
                      .|   +|+++++++|+++|+++..+|..  .+ ++++.++|.||+|+.|||++....            +.+++|+.|.|
T Consensus        71 ~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~l~v  149 (310)
T 3b59_A           71 AADSRSDVDALRASVEAAGCKVASEPAVLATP-GGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIVLHS  149 (310)
T ss_dssp             EESSHHHHHHHHHHHHHHTCCBCCCSEECCST-TCCEEEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHhCCCeEeecCcccccc-CCceEEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEEEec
Confidence            99   67999999999999999877765  33 357888999999999999976531            24589999999


Q ss_pred             CChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHH---HH
Q 017144          253 GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT---AE  329 (376)
Q Consensus       253 ~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~---~~  329 (376)
                      +|++++.+||+++|||++......     ...++..+.  .+..+.+...       . .+++|++|.|+|+++.   ++
T Consensus       150 ~D~~~a~~FY~~~LG~~~~~~~~~-----~~~fl~~~~--~~~~l~l~~~-------~-~g~~hi~f~v~d~d~~~~~~~  214 (310)
T 3b59_A          150 PNHQDMVKFFTDVLGFKVSDWLGD-----FMCFLRCNS--AHHRIAILPG-------P-PCLNHVAYDMLSVDDMMRGAH  214 (310)
T ss_dssp             TTHHHHHHHHHHTSCCEEEEEETT-----TEEEEESSS--BSCSEEEEES-------S-SEEEEEEEECSSHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCEEEEeeCC-----eEEEEecCC--CcceEEEECC-------C-CceEEEEEEcCCHHHHHHHHH
Confidence            999999999999999999765421     223455432  2334444321       1 6789999999997776   99


Q ss_pred             HHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecccccc
Q 017144          330 AIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  373 (376)
Q Consensus       330 ~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  373 (376)
                      +|+++|+++.++|++++.+..+++|++||+||.|||.+.....+
T Consensus       215 ~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~d  258 (310)
T 3b59_A          215 RLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEEVD  258 (310)
T ss_dssp             HHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCBCC
T ss_pred             HHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCccEec
Confidence            99999999999888876655689999999999999998765443

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.98  E-value=6.7e-31  Score=246.77  Aligned_cols=239  Identities=18%  Similarity=0.243  Sum_probs=174.2

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      ++++++||.|.|+|++++++||+++|||++..+..  .   ..+++..+....++.+.+...       ...+..|++|.
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~---~~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f~   71 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDD--Q---GRVYLKAWTEVDKFSLVLREA-------DEPGMDFMGFK   71 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECT--T---SCEEEECTTCCBSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecC--C---CcEEEEecCCCCceEEEEccC-------CCCCcceEEEE
Confidence            46799999999999999999999999999976542  1   235666544322333433322       12478899999


Q ss_pred             e---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC----------------------CCCCc
Q 017144          191 V---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP----------------------TPEPL  245 (376)
Q Consensus       191 V---~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~----------------------~~~~~  245 (376)
                      |   +|+++++++|+++|+++...|.....+.++.++|+||||+.|||++...                      ...++
T Consensus        72 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  151 (307)
T 1mpy_A           72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRF  151 (307)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCEE
T ss_pred             eCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCce
Confidence            9   7899999999999999876664222235678899999999999997431                      12347


Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCc-eeEEEEEeC--
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNG-YAQIAIGTD--  322 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g-~~hiaf~V~--  322 (376)
                      +|+.|.|.|++++.+||+++|||++........+.....++..+..  +..+.+...       ...+ .+|++|.|+  
T Consensus       152 ~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~-------~~~g~~~hi~f~v~d~  222 (307)
T 1mpy_A          152 DHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH-------PEKGRLHHVSFHLETW  222 (307)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC-------SSSSEEEEEEEECSCH
T ss_pred             eeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC-------CCCCcceEEEEEcCCH
Confidence            8999999999999999999999999765432222122234443322  223333321       1234 799999999  


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          323 -DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       323 -Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                       |+++++++|+++|+++..+|.+++.+.++.+||+|||||.|||++...
T Consensus       223 ~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          223 EDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence             577788999999999988887765444578999999999999998753

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.98  E-value=8.5e-31  Score=245.28  Aligned_cols=236  Identities=13%  Similarity=0.127  Sum_probs=175.2

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEE-EeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLR-KRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~-~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      ++++|+||.|.|+|++++++||+++|||++.. +.+      ..+++..+...  +.+.+.+.       ...++.|++|
T Consensus         2 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~--~~l~l~~~-------~~~~~~~~~~   66 (300)
T 2zyq_A            2 SIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE------GALYLRMDDFP--ARLVVVPG-------EHDRLLEAGW   66 (300)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS------SCEEEESSSSS--CSEEEEEC-------SSCEEEEEEE
T ss_pred             CcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC------CeEEEEeCCCc--EEEEEecC-------CCCCcceEEE
Confidence            45789999999999999999999999999865 321      23456654432  33444442       1357889999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEEcCCCCEEEEeec-CCC---------------CCCcccc
Q 017144          190 AVED---VAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GPT---------------PEPLCQV  248 (376)
Q Consensus       190 ~V~d---~d~~~~rl~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~-~~~---------------~~~~~~v  248 (376)
                      .|+|   +++++++|+++|+++..+|.+.  ..+.++.+||+|||||.|||++. ...               +..++|+
T Consensus        67 ~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (300)
T 2zyq_A           67 ECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHV  146 (300)
T ss_dssp             ECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSCEE
T ss_pred             EeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccCeE
Confidence            9975   8889999999999987666542  11356889999999999999987 211               2358999


Q ss_pred             ccccCChhHHHHHHHHhhCCEEeceecCC--------CC-CeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEE
Q 017144          249 MLRVGDLDRAINFYKKAFGMELLRKRDNP--------DY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  319 (376)
Q Consensus       249 ~L~v~D~~~a~~FY~~~lG~~~~~~~~~~--------~~-~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf  319 (376)
                      .|.|.|++++.+||+++|||++......+        .+ .....++..+.  .+..+.+...      ....+.+|++|
T Consensus       147 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~--~~~~~~~~~~------~~~~g~~h~af  218 (300)
T 2zyq_A          147 VLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNP--RHHSLAFLPM------PTSSGIVHLMV  218 (300)
T ss_dssp             EEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSS--BSCSEEEESS------CCSSSEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECC--CccEEEEecC------CCCCCceEEEE
Confidence            99999999999999999999987543221        11 23445555432  1233444431      12467899999


Q ss_pred             EeCCHHH---HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          320 GTDDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       320 ~V~Dl~~---~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      .|+|+++   ++++|+++|+++..+|.+++.+..+++||+|||||.|||++..
T Consensus       219 ~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          219 EVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             EBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             EeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            9998655   6999999999999888777655468899999999999999765

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.98  E-value=3.4e-30  Score=239.47  Aligned_cols=240  Identities=20%  Similarity=0.193  Sum_probs=172.6

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      ..+.|+.|.|+|++++++||+++|||++......... .+.  .+..+.   .....+.......+ .......+++|.|
T Consensus        31 g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~--~~~~~g---~~~~~l~~~~~~~~-~~~~~~~~~~~~v  104 (282)
T 3oxh_A           31 GTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYS--MATLNG---EAVAAIAPMPPGAP-EGMPPIWNTYIAV  104 (282)
T ss_dssp             TSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEE--EEEETT---EEEEEEEECCSCC----CCCEEEEEEEC
T ss_pred             CCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEE--EEEeCC---eeeEeeccCCCCCC-CCCCCcEEEEEEe
Confidence            3799999999999999999999999998765421110 222  233332   12233333221111 1224456899999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC--------CCCccccccccCChhHHHHHHH
Q 017144          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT--------PEPLCQVMLRVGDLDRAINFYK  263 (376)
Q Consensus       192 ~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~--------~~~~~~v~L~v~D~~~a~~FY~  263 (376)
                      +|+++++++++++|+++..+|.+.++ .++.++|+||+||.|+|++....        +..+.|+.|.|.|++++.+||+
T Consensus       105 ~d~d~~~~~l~~~G~~~~~~p~~~~~-~g~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY~  183 (282)
T 3oxh_A          105 DDVDAVVDKVVPGGGQVMMPAFDIGD-AGRMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFYE  183 (282)
T ss_dssp             SCHHHHHTTTTTTTCEEEEEEEEETT-TEEEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCEEEECCEecCC-CeEEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHHH
Confidence            99999999999999999888877754 56899999999999999987643        4568999999999999999999


Q ss_pred             HhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCc
Q 017144          264 KAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPG  343 (376)
Q Consensus       264 ~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~  343 (376)
                      ++|||++......+...+..  +..+.   .....+... .   ....++.+|++|.|+|+++++++++++|++++.+|.
T Consensus       184 ~vlG~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~-~---~~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~  254 (282)
T 3oxh_A          184 AVVGLTHSSMEIAAGQNYRV--LKAGD---AEVGGCMEP-P---MPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPA  254 (282)
T ss_dssp             HHHCCEEEEC-------CEE--EEETT---EEEEEEECC-S---STTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEE
T ss_pred             HHhCCeeeeccCCCCcceEE--EEcCC---ccEeeecCC-C---CCCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCe
Confidence            99999987543122223333  33222   122222111 1   123356789999999999999999999999999888


Q ss_pred             cCCCCCceEEEEECCCCCeEEEEecc
Q 017144          344 PLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       344 ~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +.+++ ++++|++||+||.|||++..
T Consensus       255 ~~~~~-~~~~~~~DPdGn~~~l~~~~  279 (282)
T 3oxh_A          255 DIPSV-GRFAVLSDPQGAIFSVLKAA  279 (282)
T ss_dssp             EETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EcCCC-eEEEEEECCCCCEEEEEecC
Confidence            77763 58999999999999999875

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.97  E-value=1.7e-30  Score=242.35  Aligned_cols=234  Identities=14%  Similarity=0.154  Sum_probs=172.7

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      +++|+||.|.|+|++++++||+++|||++..+.+      ..+++..+...  +.+.+...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~--~~l~~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRA--WRIAVQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBS--CSEEEEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC------CeEEEEcCCce--EEEEEccC-------CCCCccEEEEEE
Confidence            4689999999999999999999999999976542      13456554432  22333322       124688999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEEcCCCCEEEEeecCCC------------------CCCcccc
Q 017144          192 E---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  248 (376)
Q Consensus       192 ~---d~d~~~~rl~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~~------------------~~~~~~v  248 (376)
                      +   |+++++++|+++|+++..+|...  ..+..+.++|+|||||.|||++....                  ...++|+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHF  146 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccceE
Confidence            8   89999999999999987766531  11356889999999999999975421                  1358999


Q ss_pred             ccccCChhHHHHHHHHhhCCEEeceecCC--CC-CeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHH
Q 017144          249 MLRVGDLDRAINFYKKAFGMELLRKRDNP--DY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  325 (376)
Q Consensus       249 ~L~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~  325 (376)
                      .|.|+|++++.+||+++|||++......+  .+ .....++..+..  +..+.+...      +...+.+|++|.|+|++
T Consensus       147 ~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~~  218 (292)
T 1kw3_B          147 VRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFMLQANTID  218 (292)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEEEEBSSHH
T ss_pred             EEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCHH
Confidence            99999999999999999999987543221  11 123445554321  233444321      12367899999999865


Q ss_pred             H---HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCC-eEEEEecc
Q 017144          326 K---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGW-KSVFVDNL  369 (376)
Q Consensus       326 ~---~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~~  369 (376)
                      +   ++++|+ +|+++..+|++++.+..+++||+||||| .|||+...
T Consensus       219 ~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          219 DVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             HHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             HHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            5   678999 9999998888777554578899999999 99999875

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.97  E-value=9.5e-31  Score=245.71  Aligned_cols=236  Identities=14%  Similarity=0.176  Sum_probs=174.3

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      ..++|+||.|.|+|++++++||+++|||++.....  +   ..+++..+..  +..+.+.+..       ..++.|++|.
T Consensus         3 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~--~~~l~l~~~~-------~~~~~~~~f~   68 (305)
T 2wl9_A            3 KVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--D---DRIYLRMDRW--HHRIVLHADG-------SDDLAYIGWR   68 (305)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--T---TEEEEECSSB--SCSEEEECSS-------CCEEEEEEEE
T ss_pred             ccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--C---CeEEEEeCCC--eEEEEEEECC-------CCCeEEEEEE
Confidence            35789999999999999999999999999875211  1   2346665543  2345555421       3578899999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEEcCCCCEEEEeec-CC------------------CCCCcc
Q 017144          191 VE---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLER-GP------------------TPEPLC  246 (376)
Q Consensus       191 V~---d~d~~~~rl~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~-~~------------------~~~~~~  246 (376)
                      |+   |+++++++|+++|+++..+|...  ..+.++.+||+|||||.|||++. ..                  ...+++
T Consensus        69 v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  148 (305)
T 2wl9_A           69 VAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLG  148 (305)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCSC
T ss_pred             ECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCceee
Confidence            97   59999999999999988766543  22457899999999999999976 21                  013689


Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCC--CC-CeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNP--DY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      |+.|.|.|++++.+|| ++|||++......+  ++ .....++..+..  +..+.+...      ....+.+|++|.|+|
T Consensus       149 hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d  219 (305)
T 2wl9_A          149 HIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINHLMIEYTH  219 (305)
T ss_dssp             EEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEEEEEEESS
T ss_pred             eEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceEEEEEcCC
Confidence            9999999999999999 99999986432111  11 122334443321  233333321      123678999999998


Q ss_pred             ---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          324 ---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       324 ---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                         +++++++|+++|+++..+|++++.+..+++||+|||||.|||+...
T Consensus       220 ~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          220 LDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence               6678899999999999888777655457899999999999999876

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.97  E-value=1.9e-30  Score=242.63  Aligned_cols=234  Identities=18%  Similarity=0.205  Sum_probs=175.1

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      +++|+||.|.|+|++++++||+++|||++..+.+      ..+++..+..  .+.+.+.+.       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~~--~~~l~~~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC------CeEEEEeCCC--cEEEEEecC-------CCCCccEEEEEe
Confidence            4689999999999999999999999999987542      1355665443  233444332       135788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEEcCCCCEEEEeecCCC------------------CCCcccc
Q 017144          192 E---DVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  248 (376)
Q Consensus       192 ~---d~d~~~~rl~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~~------------------~~~~~~v  248 (376)
                      +   |+++++++|+++|+++...|...  ..+..+.+||+|||||.|||++....                  +..+.|+
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~hv  146 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHF  146 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCEE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccceE
Confidence            9   89999999999999987665432  11356899999999999999976521                  1358999


Q ss_pred             ccccCChhHHHHHHHHhhCCEEeceecC---CCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHH
Q 017144          249 MLRVGDLDRAINFYKKAFGMELLRKRDN---PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  325 (376)
Q Consensus       249 ~L~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~  325 (376)
                      .|.|.|++++.+||+++|||++......   ++......++..+.  .+..+.+...      +...+.+|++|.|+|++
T Consensus       147 ~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~l~~~------~~~~~~~hiaf~v~d~~  218 (297)
T 1lgt_A          147 VRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNE--RHHTLAIAAF------PLPKRIHHFMLEVASLD  218 (297)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS--BSCSEEEECC------CCSSSEEEEEEEBSCHH
T ss_pred             EEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCC--CcceEEEEcC------CCCCCceEEEEeCCCHH
Confidence            9999999999999999999998754221   11112344554332  1233444431      12467899999999987


Q ss_pred             HHH---HHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          326 KTA---EAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       326 ~~~---~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ++.   ++ +++|+++..+|.+++.+..+++||+|||||.|||++..
T Consensus       219 ~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          219 DVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             HHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            766   88 99999999888877765457799999999999999875

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.97  E-value=2e-29  Score=240.26  Aligned_cols=247  Identities=15%  Similarity=0.119  Sum_probs=173.1

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC-CceEEEEEeeCCCCceEEEEEEecCCCCC-CCCCCCceEEEE
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDK-YDIGTGFGHFGI  189 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~~~~~g~~hi~f  189 (376)
                      ..+|+||.|.|+|++++++||+++|||++..+....+ ......++..+.......+.+.+...... .....++.|++|
T Consensus        28 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf  107 (338)
T 1zsw_A           28 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL  107 (338)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             CccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEE
Confidence            6799999999999999999999999999976642111 11112233322212234566655432221 112357889999


Q ss_pred             EeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC------------------CCCcccc
Q 017144          190 AVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------PEPLCQV  248 (376)
Q Consensus       190 ~V~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~------------------~~~~~~v  248 (376)
                      .|+   |+++++++|+++|+++..++. . . +.+.+||+|||||.|||++....                  ...+.|+
T Consensus       108 ~v~~~~dld~~~~~l~~~G~~~~~~~~-~-~-G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~hv  184 (338)
T 1zsw_A          108 LVPSEDSLHYWKERFEKFDVKHSEMTT-Y-A-NRPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSV  184 (338)
T ss_dssp             EESCHHHHHHHHHHHHHTTCEECCSEE-E-T-TEEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEEE
T ss_pred             EcCCHHHHHHHHHHHHHCCCccccccc-c-C-CcEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEEE
Confidence            999   688999999999999886554 2 3 34899999999999999986531                  1247899


Q ss_pred             ccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCC-CCCceEEEEcccCCCccccCC-CceeEEEEEeC---C
Q 017144          249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGP-EDKNAVLELTYNHGVTEYDKG-NGYAQIAIGTD---D  323 (376)
Q Consensus       249 ~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~l~l~~~~~~~~~~~g-~g~~hiaf~V~---D  323 (376)
                      .|.|.|++++.+||+++|||++.....    .+..  +..++ ......+.+..  .......+ .+++|++|.|+   |
T Consensus       185 ~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~--~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~hiaf~v~~~~d  256 (338)
T 1zsw_A          185 ELTVRRLDKMASTLTEIFGYTEVSRND----QEAI--FQSIKGEAFGEIVVKYL--DGPTEKPGRGSIHHLAIRVKNDAE  256 (338)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEECS----SEEE--EESSTTCSTTCEEEEEC--CSSBCBCCBTCEEEEEEEESSHHH
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEeecC----CeEE--EEecCCCCceEEEEecc--CCCCCCCCCCceEEEEEEeCCHHH
Confidence            999999999999999999999976532    2322  22221 11013344432  11111222 46799999998   7


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc-ccc
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL-DFL  372 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~-~~~  372 (376)
                      +++++++|+++|+++. +|....+  .+.+||+|||||.|||++.. +|.
T Consensus       257 v~~~~~~l~~~G~~~~-~~~~~~~--~~~~~~~DPdG~~iEl~~~~~~~~  303 (338)
T 1zsw_A          257 LAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDGPGFT  303 (338)
T ss_dssp             HHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEEECTT
T ss_pred             HHHHHHHHHHCCCcee-eeeecCc--eEEEEEECCCCCEEEEEEcCCCcc
Confidence            9999999999999985 5555433  58899999999999999865 553

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.97  E-value=3.5e-30  Score=241.56  Aligned_cols=239  Identities=15%  Similarity=0.104  Sum_probs=173.7

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  188 (376)
                      +++.++|+||.|.|+|++++++||+++|||++..+..  .   ...|+..+..  ++.+.+.+.       ...++.|++
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~--~~~l~l~~~-------~~~~~~~~~   69 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--K---DRFYLRMDYW--HHRIVVHHN-------GQDDLEYLG   69 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--S---SEEEEESSSB--SCSEEEESS-------CCSEEEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--C---cceEEEeCCC--ceEEEEecC-------CCCCeeEEE
Confidence            3456799999999999999999999999999975421  1   2355655432  223444432       124688999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEEcCCCCEEEEeecCC----C--------C-------CC
Q 017144          189 IAVE---DVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERGP----T--------P-------EP  244 (376)
Q Consensus       189 f~V~---d~d~~~~rl~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~~----~--------~-------~~  244 (376)
                      |.|+   |+++++++|+++|+++...|...+  .+.++.+||+|||||.|||++..+    .        +       ..
T Consensus        70 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (302)
T 2ehz_A           70 WRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQG  149 (302)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGC
T ss_pred             EEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCc
Confidence            9995   588999999999999877665432  135788999999999999997521    1        1       16


Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCC--CC-CeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--DY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~-~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      ++|+.|.|+|++++.+|| ++|||++......+  ++ .....++..+..  ...+.+...      ....+.+|++|.|
T Consensus       150 l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v  220 (302)
T 2ehz_A          150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGAM------PAAKRLNHLMLEY  220 (302)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECSC------CCSSSEEEEEEEE
T ss_pred             cceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEecC------CCCCceeEEEEEc
Confidence            899999999999999999 99999986432211  21 233445554321  223333321      1235789999999


Q ss_pred             CCHHH---HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          322 DDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       322 ~Dl~~---~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +|+++   ++++|+++|+++..+|.+++.+..+++||+|||||.|||+....
T Consensus       221 ~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          221 THMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCC
T ss_pred             CCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECce
Confidence            98764   67899999999998887776554578999999999999987753

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.96  E-value=8.6e-27  Score=223.68  Aligned_cols=251  Identities=17%  Similarity=0.221  Sum_probs=179.8

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC------CCCCCCc
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK------YDIGTGF  184 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~------~~~~~g~  184 (376)
                      .+++++||.+.|+|++++.+||+++|||++..+...+++  ..+.+..|.    ..+.+........      ..++.++
T Consensus         2 ~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~g~g~   75 (357)
T 2r5v_A            2 QNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQGQ----VTLVLTEPTSDRHPAAAYLQTHGDGV   75 (357)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEETT----EEEEEEEESSTTSHHHHHHHHHSSEE
T ss_pred             CCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeCC----EEEEEeCCCCCCCHHHHHHHhcCCeE
Confidence            457999999999999999999999999999876543332  233444442    3455554211111      1135789


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC-----------------------
Q 017144          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT-----------------------  241 (376)
Q Consensus       185 ~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~-----------------------  241 (376)
                      .|++|.|+|+++++++++++|+++..+|.....+..+.+.++||+|..++|+++...                       
T Consensus        76 ~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~~  155 (357)
T 2r5v_A           76 ADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVD  155 (357)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTCC
T ss_pred             EEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCCC
Confidence            999999999999999999999998877654333444678899999999999975310                       


Q ss_pred             CCCccccccccC--ChhHHHHHHHHhhCCEEeceec--CCCCCeEEEEeecCCCCCceEEEEcccCCC---cc---c---
Q 017144          242 PEPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRD--NPDYKYTIAVMGYGPEDKNAVLELTYNHGV---TE---Y---  308 (376)
Q Consensus       242 ~~~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~---~~---~---  308 (376)
                      ...++|++|.|+  |++++.+||+++|||++....+  .+.......++..+.  ....++|......   .+   +   
T Consensus       156 ~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~~~~~~~~  233 (357)
T 2r5v_A          156 LLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQIDEFLKD  233 (357)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCHHHHHHHH
T ss_pred             cceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCchhHHHHHh
Confidence            123799999999  9999999999999999975431  222223444555432  2456666553321   10   1   


Q ss_pred             cCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccC-------CC--CC-------ceEEEEECCCCCeEEEEecc
Q 017144          309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPL-------PG--IN-------TKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       309 ~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~-------~~--~~-------~~~~~~~DPdG~~iel~~~~  369 (376)
                      ..+.+++|++|.|+|+++++++|+++|++++..|...       .+  +.       ..++|++||+|++|||++.+
T Consensus       234 ~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          234 HQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             cCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence            1467999999999999999999999999988776211       00  00       13799999999999999854

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.94  E-value=3.9e-25  Score=213.83  Aligned_cols=253  Identities=21%  Similarity=0.292  Sum_probs=182.1

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC--ceEEEEEeeCCCCceEEEEEEecCCCCCC---------
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDKY---------  178 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~~~~---------  178 (376)
                      +..++++||.|.|+|++++++||+++|||++..+.+.+.+  ....++++.+    .+.+++.........         
T Consensus        18 ~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~   93 (381)
T 1t47_A           18 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHV   93 (381)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHH
T ss_pred             CcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHH
Confidence            4567999999999999999999999999999876432222  2345556654    245666653211110         


Q ss_pred             -CCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEEcCCCCEEEEeecC-------C------C-
Q 017144          179 -DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLERG-------P------T-  241 (376)
Q Consensus       179 -~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~-------~------~-  241 (376)
                       .++.++.|++|+|+|+++++++++++|+++..+|....  .+..+.+.++||+|+.++|+++.       +      . 
T Consensus        94 ~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~~~  173 (381)
T 1t47_A           94 AEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPI  173 (381)
T ss_dssp             HHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECCCS
T ss_pred             HhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCcccccc
Confidence             13678999999999999999999999999987776432  22345788999999999999752       1      0 


Q ss_pred             ---C-----CCccccccccC--ChhHHHHHHHHhhCCEEeceec-----CCCCCeEEEEeecCCCCCceEEEEcccCC--
Q 017144          242 ---P-----EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRD-----NPDYKYTIAVMGYGPEDKNAVLELTYNHG--  304 (376)
Q Consensus       242 ---~-----~~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~l~l~~~~~--  304 (376)
                         +     ..++|+++.|.  |++++.+||+++|||++....+     .+.......++....  ....++|.....  
T Consensus       174 ~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~--g~v~i~l~~~~~~~  251 (381)
T 1t47_A          174 VEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFPINEPALAK  251 (381)
T ss_dssp             SCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEEEEEECCSS
T ss_pred             ccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC--CcEEEEEecCCcCC
Confidence               1     24799999999  9999999999999999876532     233334445554322  245566655431  


Q ss_pred             -Ccc------ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCC-----------------CceEEEEECCCC
Q 017144          305 -VTE------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI-----------------NTKITACLDPDG  360 (376)
Q Consensus       305 -~~~------~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~-----------------~~~~~~~~DPdG  360 (376)
                       ...      ...+.|++||||.|+|+++++++|+++|+++...|... +.                 ...+.|-+||+|
T Consensus       252 ~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Y-y~~l~~R~~~~~~~~~~l~~~~il~d~d~~g  330 (381)
T 1t47_A          252 KKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSY-YDTLGEWVGDTRVPVDTLRELKILADRDEDG  330 (381)
T ss_dssp             SCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGG-TTSHHHHHCCCSSCHHHHHHHTCEEEECSSC
T ss_pred             CccHHHHHHHHhCCCCcceEEEecCCHHHHHHHHHHcCCccCCCCccH-HHHHHHhccccchhHHHHHHhCeEEeeCCCC
Confidence             111      13578999999999999999999999999998776321 10                 013678899999


Q ss_pred             CeEEEEecc
Q 017144          361 WKSVFVDNL  369 (376)
Q Consensus       361 ~~iel~~~~  369 (376)
                      .++++.+.+
T Consensus       331 ~llqift~~  339 (381)
T 1t47_A          331 YLLQIFTKP  339 (381)
T ss_dssp             EEEEEEBCC
T ss_pred             eEEEEeccC
Confidence            988887766

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.93  E-value=8.6e-24  Score=206.49  Aligned_cols=227  Identities=19%  Similarity=0.282  Sum_probs=161.4

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC--CceEEEEEeeCCCCceEEEEEEecCCCC----------
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVELTYNYGVD----------  176 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~--~~~~~~~l~~g~~~~~~~l~l~~~~~~~----------  176 (376)
                      .+..++|+||.|.|+|++++++||+++|||++..+.+.+.  ..+..++++.+    .+.+.+.......          
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~   95 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTT   95 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGC
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCccccccccccc
Confidence            3446799999999999999999999999999987754332  23445556644    2455555542110          


Q ss_pred             -----C----------CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          177 -----K----------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       177 -----~----------~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                           .          ..++.|+.|++|+|+|+++++++++++|+++..+|....+ ......+++|+|+.++|+++...
T Consensus        96 ~~p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A           96 TASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             CCSSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                 0          0134789999999999999999999999999887766532 34455556666666666643211


Q ss_pred             --------------------C-----CCccccccccCChhHHHHHHHHhhCCEEeceecCCC-----CCeEEEEeecCCC
Q 017144          242 --------------------P-----EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----YKYTIAVMGYGPE  291 (376)
Q Consensus       242 --------------------~-----~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~  291 (376)
                                          +     .+++|++++|+|++++.+||+++|||++....+.++     .+....++.... 
T Consensus       175 ~~~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~-  253 (424)
T 1sqd_A          175 DTEKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND-  253 (424)
T ss_dssp             ------CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT-
T ss_pred             CCCccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC-
Confidence                                0     247999999999999999999999999987664332     133444454322 


Q ss_pred             CCceEEEEcccC----CCc---cc---cCCCceeEEEEEeCCHHHHHHHHHH----cCCeeecCC
Q 017144          292 DKNAVLELTYNH----GVT---EY---DKGNGYAQIAIGTDDVYKTAEAIKL----SGGKITREP  342 (376)
Q Consensus       292 ~~~~~l~l~~~~----~~~---~~---~~g~g~~hiaf~V~Dl~~~~~~l~~----~G~~~~~~p  342 (376)
                       ....++|.+..    ...   .+   ..|+|++||||.|+|+++++++|++    +|++++..|
T Consensus       254 -g~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          254 -EMVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             -SCSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             -CcEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence             34667776643    111   11   3688999999999999999999999    899999765

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.92  E-value=3.9e-23  Score=201.52  Aligned_cols=227  Identities=17%  Similarity=0.210  Sum_probs=159.5

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC--ceEEEEEeeCCCCceEEEEEEecCCCC----------
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVD----------  176 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~~----------  176 (376)
                      .+..++++||.|.|+|++++.+||+++|||++..+...+.+  ....++++.|.    ..+.|.......          
T Consensus        26 ~~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~----~~l~L~~~~~~~~~~~~~p~~~  101 (418)
T 1sp8_A           26 RFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS----LSFLFTAPYAHGADAATAALPS  101 (418)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETT----EEEEEEEECCSSCCGGGCSSTT
T ss_pred             cccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCC----EEEEEecCCCCccccccccccc
Confidence            34567999999999999999999999999999877543322  34556666553    345555542210          


Q ss_pred             ---C------CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC-------
Q 017144          177 ---K------YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP-------  240 (376)
Q Consensus       177 ---~------~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~-------  240 (376)
                         .      ..++.|+.|++|+|+|+++++++++++|+++..+|....+ ..+...+++|+|..++|+++..       
T Consensus       102 ~~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~~~~~~~f  180 (418)
T 1sp8_A          102 FSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAAGEPF  180 (418)
T ss_dssp             CCHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGGGSSS
T ss_pred             ccchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCCCCCCccc
Confidence               0      0135789999999999999999999999998887754422 2334444555555555554321       


Q ss_pred             ------------C---CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCC-----CeEEEEeecCCCCCceEEEEc
Q 017144          241 ------------T---PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-----KYTIAVMGYGPEDKNAVLELT  300 (376)
Q Consensus       241 ------------~---~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~l~l~  300 (376)
                                  .   ..+++|+++.|+|++++.+||+++|||++......++.     +....++..+.  ....++|.
T Consensus       181 ~p~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g~i~l~l~  258 (418)
T 1sp8_A          181 LPGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLN  258 (418)
T ss_dssp             STTCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEE
T ss_pred             CCCCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC--CcEEEEEe
Confidence                        0   12479999999999999999999999999876543221     23334454322  24666666


Q ss_pred             ccCC----Cc---cc---cCCCceeEEEEEeCCHHHHHHHHHH----cCCeeecCC
Q 017144          301 YNHG----VT---EY---DKGNGYAQIAIGTDDVYKTAEAIKL----SGGKITREP  342 (376)
Q Consensus       301 ~~~~----~~---~~---~~g~g~~hiaf~V~Dl~~~~~~l~~----~G~~~~~~p  342 (376)
                      +...    ..   .+   ..|+|++||||.|+|+++++++|++    +|++++..|
T Consensus       259 e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          259 EPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             EECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             ecccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            5421    11   11   3688999999999999999999999    899999876

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.91  E-value=1.3e-22  Score=195.26  Aligned_cols=226  Identities=19%  Similarity=0.289  Sum_probs=167.4

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCc--eEEEEEeeCCCCceEEEEEEecCCCCC-------CCCC
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDR--YTNAFLGYGPEDSHFVVELTYNYGVDK-------YDIG  181 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~--~~~~~l~~g~~~~~~~l~l~~~~~~~~-------~~~~  181 (376)
                      ..++|+||.|.|+|++++.+||+++|||++....+.+.+.  ...+++..|+    ..+++........       ..++
T Consensus         8 ~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~----i~~~L~~p~~p~s~~~a~fl~~hG   83 (393)
T 3isq_A            8 RFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGK----IVFVLSSALNPWNKEMGDHLVKHG   83 (393)
T ss_dssp             EEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETT----EEEEEEEESSTTCHHHHHHHHHHC
T ss_pred             CCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCC----EEEEEecCCCCCchHHHHHHHhcC
Confidence            3579999999999999999999999999998865543221  2345565553    4555655322111       1146


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEEcCCCCEEEEeecCC-----------C-------
Q 017144          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERGP-----------T-------  241 (376)
Q Consensus       182 ~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~~-----------~-------  241 (376)
                      .|+.|++|.|+|+++++++++++|+++..+|.....  +..+...+++|.|..+.|++...           .       
T Consensus        84 ~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~~~  163 (393)
T 3isq_A           84 DGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLL  163 (393)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCTTG
T ss_pred             CcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCccccccccccc
Confidence            799999999999999999999999999888866543  23467778999999999987421           0       


Q ss_pred             ---C----CCccccccccCC--hhHHHHHHHHhhCCEEeceec-----CCCCCeEEEEeecCCCCCceEEEEcccCC--C
Q 017144          242 ---P----EPLCQVMLRVGD--LDRAINFYKKAFGMELLRKRD-----NPDYKYTIAVMGYGPEDKNAVLELTYNHG--V  305 (376)
Q Consensus       242 ---~----~~~~~v~L~v~D--~~~a~~FY~~~lG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~l~l~~~~~--~  305 (376)
                         +    ..|+|++++|.|  ++++.+||+++|||+.....+     .+..+....++...  .....++|..+..  .
T Consensus       164 ~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~--~g~v~i~L~ep~~~~~  241 (393)
T 3isq_A          164 PKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY--EESIKMPINEPAPGKK  241 (393)
T ss_dssp             GGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECT--TSSCEEEEEEEECCSB
T ss_pred             cCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECC--CCCEEEEEecCCCCCC
Confidence               0    137999999998  999999999999999976543     12233444455432  2356777776432  1


Q ss_pred             -cc------ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 017144          306 -TE------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  342 (376)
Q Consensus       306 -~~------~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p  342 (376)
                       +.      ...|+|++||||.|+|+.+++++|+++|++++..|
T Consensus       242 ~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P  285 (393)
T 3isq_A          242 KSQIQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVP  285 (393)
T ss_dssp             CCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCC
Confidence             11      13588999999999999999999999999999876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.90  E-value=9.2e-23  Score=195.60  Aligned_cols=245  Identities=16%  Similarity=0.102  Sum_probs=168.1

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC----CCCCCCce
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFG  185 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~----~~~~~g~~  185 (376)
                      +..++++||.+.|+|++++.+|| ++|||+++.+....    ..+++..+    ...+.+...++...    ..++.++.
T Consensus         8 ~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g----~~~l~l~~~~~~~~~~~~~~~g~gv~   78 (357)
T 1cjx_A            8 MGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQG----EINLILNNEPNSIASYFAAEHGPSVC   78 (357)
T ss_dssp             TCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEET----TEEEEEECCSSSHHHHHHHHHSSEEE
T ss_pred             cccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecC----CEEEEEECCCCchhhhhhhhcCCeEE
Confidence            55779999999999999999999 78999998764311    23344444    23455544322110    12457899


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC------------------C-----
Q 017144          186 HFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT------------------P-----  242 (376)
Q Consensus       186 hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~------------------~-----  242 (376)
                      |++|+|+|+++++++++++|+++...|..  .+......+++|+|..++|+++...                  +     
T Consensus        79 ~iaf~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~~~~~i  156 (357)
T 1cjx_A           79 GMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGAGL  156 (357)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSCCTTSE
T ss_pred             EEEEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCCCCCCe
Confidence            99999999999999999999998766532  1223445567777777777754311                  1     


Q ss_pred             CCccccccccC--ChhHHHHHHHHhhCCEEeceecCCC--CCe--EEEEeecCCCCCceEEEEccc-CCC-cc------c
Q 017144          243 EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPD--YKY--TIAVMGYGPEDKNAVLELTYN-HGV-TE------Y  308 (376)
Q Consensus       243 ~~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~~~~--~~~--~~~~l~~~~~~~~~~l~l~~~-~~~-~~------~  308 (376)
                      .+++|+++.|+  |++++.+||+++|||++......++  ...  .+.++..    ....++|... ... ..      .
T Consensus       157 ~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~----g~~~i~L~~~~~~~~~~~~~~~~~  232 (357)
T 1cjx_A          157 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPD----GMIRIPLNEESSKGAGQIEEFLMQ  232 (357)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTT----SSCEEEEEEECTTCCSHHHHHHHH
T ss_pred             eEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCC----CCEEEEEeeecCCCCChHHHhHHh
Confidence            23789999999  9999999999999999976543221  111  2222222    2456777654 211 11      1


Q ss_pred             cCCCceeEEEEEeCCHHHHHHHHHHcCCeeec-CCc--------cCC-CCC-------ceEEEEEC----CCCCeEEEEe
Q 017144          309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITR-EPG--------PLP-GIN-------TKITACLD----PDGWKSVFVD  367 (376)
Q Consensus       309 ~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~-~p~--------~~~-~~~-------~~~~~~~D----PdG~~iel~~  367 (376)
                      ..+.+++|++|.|+|+++++++|+++|+++.. .|.        +.. .+.       ..+.|-+|    |+|++++|.+
T Consensus       233 ~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift  312 (357)
T 1cjx_A          233 FNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFS  312 (357)
T ss_dssp             HTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEB
T ss_pred             cCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEec
Confidence            25678999999999999999999999999987 551        011 010       02577788    8888888877


Q ss_pred             cc
Q 017144          368 NL  369 (376)
Q Consensus       368 ~~  369 (376)
                      .+
T Consensus       313 ~~  314 (357)
T 1cjx_A          313 ET  314 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            54

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=7.3e-20  Score=149.56  Aligned_cols=129  Identities=57%  Similarity=1.064  Sum_probs=101.9

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      ++|+|+.|.|+|++++++||+++|||++......+++.+..+++..+.......+++...........+.++.|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            47999999999999999999999999998776555555667788876533345677765433333344568889999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       193 d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      |+++++++|+++|+++..+|...+.+..+.+||+|||||.|||++..+.
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            9999999999999999888777766556789999999999999987654

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.81  E-value=1.2e-19  Score=152.97  Aligned_cols=127  Identities=20%  Similarity=0.207  Sum_probs=91.4

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC--C---CCCCC
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK--Y---DIGTG  183 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~--~---~~~~g  183 (376)
                      +...++|.|+.|.|+|+++|++||+++|||++..+...++  .....+..........+.+........  .   ..+.|
T Consensus        21 ~~~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g   98 (155)
T 4g6x_A           21 QSNAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADG   98 (155)
T ss_dssp             --CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTT
T ss_pred             ccCceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCC
Confidence            5566799999999999999999999999999877654433  223333332222233333322211111  0   12357


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          184 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       184 ~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      ..|++|.|+|+++++++|+++|+++..+|.+.++  ++.+||+|||||.|||+|..
T Consensus        99 ~~~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A           99 IPAASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             CCSEEEEESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             ceEEEeeechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            8899999999999999999999999888887764  47889999999999999864

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.79  E-value=1.3e-18  Score=142.01  Aligned_cols=127  Identities=49%  Similarity=0.912  Sum_probs=100.2

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      ++.|+.|.|.|++++.+||+++|||++......+++.+.+.++..++...+..++|....+......+.+..|++|.|+|
T Consensus         2 ~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d   81 (135)
T 1f9z_A            2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCC
Confidence            47899999999999999999999999987655455556677777654333567777654433333456688899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +++++++++++|+++..+|...+.+..+++|++|||||.|||++...
T Consensus        82 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           82 AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             HHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            99999999999999998877666554478999999999999999764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.79  E-value=3e-18  Score=139.14  Aligned_cols=122  Identities=27%  Similarity=0.360  Sum_probs=95.3

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEe-------cCCCC---CCC-
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY-------NYGVD---KYD-  179 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~-------~~~~~---~~~-  179 (376)
                      +.++|+||.|.|+|++++++||+++|||++..+...++.....+++..++    ..+++..       .....   .++ 
T Consensus         2 ~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~   77 (134)
T 3l7t_A            2 KLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGD----IELEIFGNKLTDSNYCAPPERISWPR   77 (134)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETT----EEEEEEECCTTSTTCCCCCCCCCSSS
T ss_pred             ceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCC----eEEEEEecccccccccCCccccCCCC
Confidence            46799999999999999999999999999988766555444456777653    2566665       22111   122 


Q ss_pred             CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          180 IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       180 ~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      .+.|+.|++|.|+|+++++++|+++|+++...|....+ +.+.+||+|||||.|||+|
T Consensus        78 ~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           78 EACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             CCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             CCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            45678999999999999999999999998766555443 5689999999999999985

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.79  E-value=1.6e-18  Score=140.79  Aligned_cols=124  Identities=26%  Similarity=0.362  Sum_probs=94.7

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-------CCCCC
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-------DIGTG  183 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-------~~~~g  183 (376)
                      |..+|+|+.|.|+|++++++||+++|||++..+...++.....+++..++.    .+++....+....       ..+.|
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~g   77 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT----KMELLHPLGLDSPIAGFLQKNKAGG   77 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSS----EEEEEEECSTTCTTHHHHHHCTTCE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCE----EEEEEecCCCCchhhhhhhccCCCC
Confidence            567999999999999999999999999998766544444456778877542    4555553322211       23568


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEE--EcCCCCEEEEeec
Q 017144          184 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLER  238 (376)
Q Consensus       184 ~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~  238 (376)
                      +.|++|.|+|+++++++|+++|+++..++.....++.+.+++  +|||||.|||+|.
T Consensus        78 ~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           78 MHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            899999999999999999999999877655544445566666  8999999999873

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.79  E-value=1.1e-18  Score=158.74  Aligned_cols=148  Identities=16%  Similarity=0.254  Sum_probs=114.8

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  188 (376)
                      ....++|+||.|.|+|++++++||+++|||++..+.+      ..+++.+++    ..+.+.....     .+.++.|++
T Consensus        21 ~~~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~----~~l~l~~~~~-----~~~~~~hia   85 (252)
T 3pkv_A           21 QGHMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV----SQIQFRAAAD-----GTKPFYHIA   85 (252)
T ss_dssp             ----CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT----EEEEEEECCT-----TCCCCCEEE
T ss_pred             cCcCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC----EEEEEEECCC-----CCCCeeEEE
Confidence            4456799999999999999999999999999977643      346677653    3566665321     234688999


Q ss_pred             EEeC--CHHHHHHHHHHcCCeeecC-Cee---cCCCCeEEEEEEcCCCCEEEEeecCCC------------CCCcccccc
Q 017144          189 IAVE--DVAKTVDLVKAKGGKVTRE-PGP---VKGGNTVIAFIEDPDGYKFELLERGPT------------PEPLCQVML  250 (376)
Q Consensus       189 f~V~--d~d~~~~rl~~~G~~i~~~-p~~---~~~~~~~~~~~~DPdG~~iel~~~~~~------------~~~~~~v~L  250 (376)
                      |.|+  ++++++++|+++ +++..+ +..   ...++.+.+||+|||||.+||++....            ..+++||.|
T Consensus        86 f~V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L  164 (252)
T 3pkv_A           86 INIAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINI  164 (252)
T ss_dssp             EEECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEE
T ss_pred             EEecHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEE
Confidence            9986  599999999999 988652 221   123578999999999999999986532            135899999


Q ss_pred             ccCChhHHHHHHHHhhCCEEece
Q 017144          251 RVGDLDRAINFYKKAFGMELLRK  273 (376)
Q Consensus       251 ~v~D~~~a~~FY~~~lG~~~~~~  273 (376)
                      .|+|++++.+|| +.|||+....
T Consensus       165 ~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          165 TTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             ECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             EeCCHHHHHHHH-HHcCCCcccC
Confidence            999999999999 9999999865

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.79  E-value=2.7e-18  Score=142.43  Aligned_cols=126  Identities=53%  Similarity=0.884  Sum_probs=95.4

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  188 (376)
                      +++..+|+|+.|.|+|++++++||+++|||++..+...+++.+..+++..+....+..+++...........+.++.|++
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~   82 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIA   82 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEE
Confidence            35567999999999999999999999999999876544444455678877653223567777654433334456889999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       189 f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |.|+|+++++++|+++|+++..+     ++...++||+|||||.|||++..
T Consensus        83 f~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           83 IGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EEeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            99999999999999999998654     33334459999999999999753

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.79  E-value=4.3e-18  Score=138.42  Aligned_cols=125  Identities=17%  Similarity=0.228  Sum_probs=95.3

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  188 (376)
                      .++.++|+||.|.|+|++++++||+++|||++..+...+++ ...+.+..+..  ...+.+.............+..|++
T Consensus         8 ~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~   84 (133)
T 4hc5_A            8 SLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPGA--QTQVALGLPSWYEDGRKPGGYTGIS   84 (133)
T ss_dssp             CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTTC--SCEEEEECGGGCSSCCCSCEEEEEE
T ss_pred             cccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCCC--ceEEEEecCcccccccCCCCeEEEE
Confidence            45677999999999999999999999999999876543222 22333443322  4456666543211222335678999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          189 IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       189 f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      |.|+|+++++++|+++|+++..+|...++ +.+.++|+||+|+.|||+|
T Consensus        85 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           85 LITRDIDEAYKTLTERGVTFTKPPEMMPW-GQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             EEESCHHHHHHHHHHTTCEESSSCEECTT-SCEEEEEECTTCEEEEEEE
T ss_pred             EEeCCHHHHHHHHHHCCCEeecCCCcCCC-CCEEEEEECCCCCEEEEEe
Confidence            99999999999999999999888888775 3489999999999999987

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.78  E-value=2.8e-18  Score=140.03  Aligned_cols=124  Identities=23%  Similarity=0.249  Sum_probs=94.3

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEe-ecCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-----CCCCC
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR-DIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-----DIGTG  183 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~-~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-----~~~~g  183 (376)
                      .|.++|+||+|.|+|++++++||+ +|||++..+. ..+......+|+..+    ...+++.........     ..+.|
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCc
Confidence            356799999999999999999999 9999986542 223334566777765    346777664332211     01578


Q ss_pred             ceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC-CCCeEEEEEEcCCCCEEEEeec
Q 017144          184 FGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK-GGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       184 ~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      ++|++|.|+|+++++++|+++|+++..+|.+.. .++.+.+|++||||+.|||+|.
T Consensus        78 ~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            899999999999999999999999877654332 2457899999999999999973

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.78  E-value=3.3e-18  Score=138.10  Aligned_cols=120  Identities=18%  Similarity=0.312  Sum_probs=95.1

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCC--CCCCCCCceEEEEE
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD--KYDIGTGFGHFGIA  190 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~--~~~~~~g~~hi~f~  190 (376)
                      ++|+||.|.|+|++++++||+++|||++..+...++..+..+|+..++   +..+++.......  +...+.|+.|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            579999999999999999999999999976644334445677887654   3466777654322  22245678999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       191 V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      |+|   +++++++|+++|+++..+|...+. +.+.+||+|||||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            999   889999999999999887776654 467899999999999996

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.76  E-value=6.8e-18  Score=160.52  Aligned_cols=181  Identities=10%  Similarity=0.084  Sum_probs=132.6

Q ss_pred             ccchhhhhccccCCccccccchHHHHHHcCcccccccCCCccCCccccCccc-ccccc----------------------
Q 017144           52 RRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQN-VLDWV----------------------  108 (376)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~~----------------------  108 (376)
                      .+-.+.|+++.|++..++-....++.+..................++.||+| .++..                      
T Consensus        64 ~~~g~~~~af~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~  143 (339)
T 3lm4_A           64 PEAGMGHAAMRTSSPEALERRAKSLTDGNVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSK  143 (339)
T ss_dssp             SSCEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEECCSTTBCCEEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSC
T ss_pred             CCCCcceEEEEeCCHHHHHHHHHHHHHCCCceeeccCCCCceEEEEEECCCCCEEEEEEeeeEcCCCccccccccCcccc
Confidence            3446789999999988887777776664333322222233345667789998 11210                      


Q ss_pred             ----cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCc
Q 017144          109 ----KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  184 (376)
Q Consensus       109 ----~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~  184 (376)
                          .+...+|+||.|.|+|++++++||+++|||++..... +++....+|+.++..  ++.+.+.....    ....++
T Consensus       144 ~~~~g~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~----~~~~~~  216 (339)
T 3lm4_A          144 KPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT----GGHGKL  216 (339)
T ss_dssp             CCSBSSCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECTT----SCCSEE
T ss_pred             cCCCCCCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC----CCCCce
Confidence                1145789999999999999999999999999987765 333445778887664  33455554211    123569


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          185 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       185 ~hi~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +|++|.|+|   +++++++|+++|+++..+|.++..+..+++||+||+||.||++...
T Consensus       217 ~Hiaf~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          217 HHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             EEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             eEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            999999999   7788899999999998888877766788999999999999998554

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.76  E-value=1.6e-17  Score=143.92  Aligned_cols=128  Identities=37%  Similarity=0.614  Sum_probs=99.9

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCc---------------eEEEEEEecCCC
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS---------------HFVVELTYNYGV  175 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~---------------~~~l~l~~~~~~  175 (376)
                      ...+|+||+|.|+|++++++||+++|||++..+...+...+..++++.+....               ...+++....+.
T Consensus        31 ~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~  110 (187)
T 3vw9_A           31 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT  110 (187)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTG
T ss_pred             ceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCC
Confidence            34689999999999999999999999999998877667778888888765311               245666543221


Q ss_pred             C-----CCC----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          176 D-----KYD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       176 ~-----~~~----~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      .     .+.    ...|+.|++|.|+|+++++++|+++|+++..+|....+  +..+||+|||||.|||++...
T Consensus       111 ~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          111 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             GGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGG
T ss_pred             CCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEccc
Confidence            1     121    22488999999999999999999999999887765443  336899999999999998653

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.76  E-value=7.4e-18  Score=135.57  Aligned_cols=123  Identities=24%  Similarity=0.356  Sum_probs=91.1

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC---CCCCCCCCceE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGH  186 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~~~~~~g~~h  186 (376)
                      |+..+++|+.|.|+|++++++||+++|||++..+...++.....+++..++.    .+++......   +....+.|..|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~   76 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRH   76 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCC
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceE
Confidence            4567899999999999999999999999999765432222222345665542    5666653221   11223467889


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       187 i~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      ++|.|+|+++++++|+++|+++...|....+ +.+.+||+|||||.|||+|
T Consensus        77 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           77 LAFKVEHIEEVIAFLNEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            9999999999999999999998766544333 4688999999999999975

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.75  E-value=2e-17  Score=138.41  Aligned_cols=123  Identities=21%  Similarity=0.301  Sum_probs=92.0

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC---CCCCCCCCce
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFG  185 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~~~~~~g~~  185 (376)
                      .++..+|+||.|.|+|++++++||+++|||++..+.+      ..+++..++    ..+.+......   .......|..
T Consensus        18 ~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~g~~   87 (152)
T 3huh_A           18 QMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGA----QKINLHQQEMEFEPKASRPTPGSA   87 (152)
T ss_dssp             --CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETT----EEEEEEETTBCCSSCCSSCCTTCC
T ss_pred             CcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCC----eEEEEeccCCcCCCcCcCCCCCcc
Confidence            4567799999999999999999999999999987632      245666653    34555553221   1122356788


Q ss_pred             EEEEEeC-CHHHHHHHHHHcCCeeecCCeecCCCC--eEEEEEEcCCCCEEEEeecCCC
Q 017144          186 HFGIAVE-DVAKTVDLVKAKGGKVTREPGPVKGGN--TVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       186 hi~f~V~-d~d~~~~rl~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      |++|.+. |+++++++|+++|+++..+|....++.  .+.+||+|||||.|||.+..+.
T Consensus        88 hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           88 DLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             EEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            9999997 999999999999999887776554432  4899999999999999987654

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.75  E-value=2.2e-17  Score=135.43  Aligned_cols=124  Identities=22%  Similarity=0.280  Sum_probs=93.1

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC--CCC-CCCCCceE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--DKY-DIGTGFGH  186 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--~~~-~~~~g~~h  186 (376)
                      |+.++|.|+.|.|+|++++++||+++|||++..+...++..+..+++. +    ...+++......  +.+ ....|..|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h   75 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDH   75 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcce
Confidence            356799999999999999999999999999987655333234455555 2    345666664332  111 23467889


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          187 FGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       187 i~f~V---~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      ++|.|   +|+++++++|+++|+++. +|.+.+.  ++.+||+|||||.|||++..+.
T Consensus        76 ~~f~v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           76 LSFSVESMTDLDVLEERLAKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECTT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCCC
Confidence            99999   789999999999999986 4444433  4899999999999999987654

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.75  E-value=2.6e-17  Score=133.77  Aligned_cols=121  Identities=20%  Similarity=0.309  Sum_probs=92.9

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC---CCCCCCCCceE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGFGH  186 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~~~~~~g~~h  186 (376)
                      ++..+|+|+.|.|+|++++++||+++|||++....+      ..+++..++    ..+.+......   .......+..|
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~   75 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGH----QKINLHQLGNEFEPKAQNVRVGSAD   75 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETT----EEEEEEETTSCCSSCCTTCCTTCCE
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCC----EEEEEEcCCCCccccCCCCCCCccE
Confidence            446799999999999999999999999999986532      245566653    34555553221   11224567899


Q ss_pred             EEEEeCC-HHHHHHHHHHcCCeeecCCeecCCC--CeEEEEEEcCCCCEEEEeecCC
Q 017144          187 FGIAVED-VAKTVDLVKAKGGKVTREPGPVKGG--NTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       187 i~f~V~d-~d~~~~rl~~~G~~i~~~p~~~~~~--~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      ++|.|+| +++++++|+++|+++..+|...+++  ..+.+||+|||||.|||++...
T Consensus        76 ~~~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           76 LCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEEEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            9999997 9999999999999998777655443  2489999999999999998753

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.75  E-value=7e-17  Score=134.57  Aligned_cols=127  Identities=20%  Similarity=0.230  Sum_probs=95.6

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeec-----------CCCceEEEEEeeCCCCceEEEEEEec--CCCC
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDI-----------PEDRYTNAFLGYGPEDSHFVVELTYN--YGVD  176 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----------~~~~~~~~~l~~g~~~~~~~l~l~~~--~~~~  176 (376)
                      .+.++|+|+.|.|+|++++++||++ |||++......           ++.....+++..++.  +..+++...  ....
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g--~~~l~l~~~~~~~~~   83 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTI   83 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCC
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC--CcEEEEEEecCCCCc
Confidence            3567999999999999999999999 99999765432           112345677776543  234555542  2211


Q ss_pred             -----CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          177 -----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       177 -----~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                           ....+.|+.|++|.|+|+++++++|+++|+++..+|...+ ++.+.+||+||||+.|||++...
T Consensus        84 ~~~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           84 ADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYE-NSYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             CBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEET-TTEEEEEEECGGGCEEEEEEECC
T ss_pred             ccccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccC-CceEEEEEECCCCCEEEEEeccC
Confidence                 1123457889999999999999999999999988877665 35789999999999999998653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.75  E-value=3.4e-18  Score=143.96  Aligned_cols=124  Identities=15%  Similarity=0.104  Sum_probs=90.4

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc--cc---cCCCceeE
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--EY---DKGNGYAQ  316 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~--~~---~~g~g~~h  316 (376)
                      .-+|.|++|.|.|+++|++||+++|||++......++  ..+..+..........+.+.......  +.   ..+.+..|
T Consensus        24 ~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~  101 (155)
T 4g6x_A           24 AMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGA--DRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPA  101 (155)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCS
T ss_pred             ceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCC--ceEEEEeccCCCcceEEEeccCCCccccccccccccCCceE
Confidence            3479999999999999999999999999876544333  34444443232223333332221111  11   12457789


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          317 IAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       317 iaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ++|.|+|+++++++|+++|+++..+|.+.++  ++.+||+|||||.|||+|..
T Consensus       102 l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          102 ASFAVDDIAAEYERLSALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             EEeeechhhhhhhHHhcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999999999998887776  48899999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.74  E-value=1.8e-17  Score=140.45  Aligned_cols=127  Identities=24%  Similarity=0.436  Sum_probs=98.2

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC-C-----CCCCCc
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-Y-----DIGTGF  184 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-~-----~~~~g~  184 (376)
                      +.++|+||+|.|+|++++++||+++|||++..+...++.....+++..++    ..+++........ .     ..+.|+
T Consensus         5 ~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~~~~~~~~~~~~~g~   80 (161)
T 3oa4_A            5 KSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE----SKIELLEPLSEESPIAKFIQKRGEGI   80 (161)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEEESSTTSHHHHHHHHHCSEE
T ss_pred             ccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC----eEEEEEeECCCCChHHHHhhcCCCCe
Confidence            35689999999999999999999999999987665554455677887753    4567766433221 0     135789


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecC-CeecCCCCeEEEEE--EcCCCCEEEEeecCCCC
Q 017144          185 GHFGIAVEDVAKTVDLVKAKGGKVTRE-PGPVKGGNTVIAFI--EDPDGYKFELLERGPTP  242 (376)
Q Consensus       185 ~hi~f~V~d~d~~~~rl~~~G~~i~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~~~~~~  242 (376)
                      .|++|.|+|+++++++|+++|+++..+ |....+ +.+.+|+  +||||+.|||++..+..
T Consensus        81 ~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~~~  140 (161)
T 3oa4_A           81 HHIAIGVKSIEERIQEVKENGVQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKEQA  140 (161)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHCCCEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCCcc
Confidence            999999999999999999999998766 544333 4566777  49999999999987653

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.74  E-value=4.7e-17  Score=152.49  Aligned_cols=179  Identities=13%  Similarity=0.128  Sum_probs=130.7

Q ss_pred             cchhhhhccccCCccccccchHHHHHHcCcccccccC--CCccCCccccCccc-ccccc---------------------
Q 017144           53 RLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTS--GNMAPTSNTVTEQN-VLDWV---------------------  108 (376)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~p~~-~~~~~---------------------  108 (376)
                      .-.+.|+++.|++...+.....++.+..........+  .......++.||+| .++..                     
T Consensus        63 ~~~~~h~a~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~  142 (309)
T 3hpy_A           63 TAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQ  142 (309)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGG
T ss_pred             CCceeEEEEEECCHHHHHHHHHHHHhCCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccceecccccccCCCCCccc
Confidence            3467899999998888877777777664333322221  23345677889998 11110                     


Q ss_pred             ---cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC-CceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCc
Q 017144          109 ---KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  184 (376)
Q Consensus       109 ---~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~  184 (376)
                         .....+|+||.|.|+|++++++||+++|||++......+. +.....|+..+...  +.+.+...+      ...++
T Consensus       143 ~~~~~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~  214 (309)
T 3hpy_A          143 REHGIAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKV--HDIAFVEYP------EKGKL  214 (309)
T ss_dssp             GGSSSCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSS--CSEEEEECS------STTEE
T ss_pred             cCCCcccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCc--eeEEEecCC------CCCce
Confidence               1345789999999999999999999999999987665433 33467788876543  334444321      23468


Q ss_pred             eEEEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          185 GHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       185 ~hi~f~V~d~d~---~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +|++|.|+|+++   ++++|+++|+++..+|..+..++.+++||+|||||.|||...+
T Consensus       215 ~Hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          215 HHCSFLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             eEEEEECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            999999998664   5789999999998888887766788999999999999999764

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.74  E-value=3.5e-17  Score=135.67  Aligned_cols=129  Identities=20%  Similarity=0.321  Sum_probs=96.6

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCC--CceEEEEEEecCCCCCC------CCC
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE--DSHFVVELTYNYGVDKY------DIG  181 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~--~~~~~l~l~~~~~~~~~------~~~  181 (376)
                      .+..+++||.|.|+|++++++||+++|||++......++.....+++..++.  ..+..+++.........      ..+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            3567999999999999999999999999999876554444455677777652  12356777764332111      133


Q ss_pred             --CCceEEEEEeCCHHHHHHHHHHcCCeee-cCCeecCCCCeEEEEE--EcCCCCEEEEeecC
Q 017144          182 --TGFGHFGIAVEDVAKTVDLVKAKGGKVT-REPGPVKGGNTVIAFI--EDPDGYKFELLERG  239 (376)
Q Consensus       182 --~g~~hi~f~V~d~d~~~~rl~~~G~~i~-~~p~~~~~~~~~~~~~--~DPdG~~iel~~~~  239 (376)
                        .|+.|++|.|+|+++++++|+++|+++. .+|....+ +.+.+|+  +||||+.|||++..
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecC
Confidence              6789999999999999999999999987 44544333 4466667  89999999999864

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.74  E-value=2.2e-17  Score=143.08  Aligned_cols=128  Identities=30%  Similarity=0.525  Sum_probs=101.6

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCC---------------ceEEEEcccCCCc-
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK---------------NAVLELTYNHGVT-  306 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~---------------~~~l~l~~~~~~~-  306 (376)
                      .+++|+.|.|.|++++++||+++|||++......++..+.+++++.+....               +..++|....+.. 
T Consensus        33 ~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  112 (187)
T 3vw9_A           33 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  112 (187)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGGG
T ss_pred             eEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCCC
Confidence            468999999999999999999999999988776667778888888654311               3567775543321 


Q ss_pred             ----cccCC----CceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccccc
Q 017144          307 ----EYDKG----NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  372 (376)
Q Consensus       307 ----~~~~g----~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  372 (376)
                          .+..+    .+++|++|.|+|+++++++|+++|+++..+|...+.  .+++|++|||||.|||++.....
T Consensus       113 ~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  184 (187)
T 3vw9_A          113 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  184 (187)
T ss_dssp             CTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSG
T ss_pred             CCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEccccc
Confidence                12222    388999999999999999999999999988765554  35789999999999999987644

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.74  E-value=3.9e-17  Score=152.77  Aligned_cols=202  Identities=14%  Similarity=0.169  Sum_probs=136.1

Q ss_pred             chhhhhccccCCccccccchHHHHHHcCccccccc-C-CCccCCccccCccc-ccccc----------------------
Q 017144           54 LALFQLGAAIPQSHFFGAKALKLLRAEGSTIEAST-S-GNMAPTSNTVTEQN-VLDWV----------------------  108 (376)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~~~~p~~-~~~~~----------------------  108 (376)
                      -.+.|+++.++++.++.....++.+.......... . .......++.||+| .++..                      
T Consensus        63 ~~~~~~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~  142 (307)
T 1mpy_A           63 PGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRD  142 (307)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSC
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHHcCCceecCCcccCCCceEEEEEECCCCCEEEEEEcchhcccccccccCCcCCccc
Confidence            36789999999988887777777666443333221 1 11234556789999 11110                      


Q ss_pred             --cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCC-ce
Q 017144          109 --KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG-FG  185 (376)
Q Consensus       109 --~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g-~~  185 (376)
                        .+...+|+||.|.|+|++++++||+++|||++........+.....|+..+...+  .+++...       ...| +.
T Consensus       143 ~~~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~-------~~~g~~~  213 (307)
T 1mpy_A          143 LKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAH--DVAFIHH-------PEKGRLH  213 (307)
T ss_dssp             CCTTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSC--SEEEEEC-------SSSSEEE
T ss_pred             CCCCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCce--eEEEecC-------CCCCcce
Confidence              1346789999999999999999999999999986653222222335666654322  3344432       1235 78


Q ss_pred             EEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCC-ccccccccCChhHHHHH
Q 017144          186 HFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP-LCQVMLRVGDLDRAINF  261 (376)
Q Consensus       186 hi~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~-~~~v~L~v~D~~~a~~F  261 (376)
                      |++|.|+|   +++++++|+++|+++..+|.+.+.+.++.+||+|||||.|||++......+ -.-......++.+.+.|
T Consensus       214 hi~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~w~~~~~~~~~~~  293 (307)
T 1mpy_A          214 HVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFY  293 (307)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCT
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccccCCCCCCeEeeccccccccee
Confidence            99999995   667788999999998877777654457789999999999999986532111 11123356677777777


Q ss_pred             HHH
Q 017144          262 YKK  264 (376)
Q Consensus       262 Y~~  264 (376)
                      |..
T Consensus       294 ~~~  296 (307)
T 1mpy_A          294 HDR  296 (307)
T ss_dssp             TTC
T ss_pred             cCc
Confidence            754

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.72  E-value=9.8e-17  Score=132.14  Aligned_cols=127  Identities=20%  Similarity=0.305  Sum_probs=92.0

Q ss_pred             cccccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceE
Q 017144          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (376)
Q Consensus       107 ~~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~h  186 (376)
                      |+. |...+.||.|.|+|++++++||+++|||++..+... ++.+..++++.+..  ++.+++....+..+...+.++.|
T Consensus         5 ~~~-m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~h   80 (139)
T 1twu_A            5 FSS-FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSL   80 (139)
T ss_dssp             CSS-CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCE
T ss_pred             CCC-CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccE
Confidence            555 556788999999999999999999999999765432 23345677776543  34466665433323344567889


Q ss_pred             EEEEeCCH---HHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          187 FGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       187 i~f~V~d~---d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      ++|.|+|+   ++++++|+++|+++..++.......+  .||+|||||.|||++..
T Consensus        81 i~~~v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           81 LVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             EEEECCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             EEEEeCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            99999999   99999999999998732221111123  26999999999999864

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.72  E-value=6.5e-17  Score=152.67  Aligned_cols=176  Identities=15%  Similarity=0.159  Sum_probs=128.2

Q ss_pred             chhhhhccccCCccccccchHHHHHHcCccccccc-C-CCccCCccccCccc-ccc--------------c---ccccce
Q 017144           54 LALFQLGAAIPQSHFFGAKALKLLRAEGSTIEAST-S-GNMAPTSNTVTEQN-VLD--------------W---VKSDKR  113 (376)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~~~~p~~-~~~--------------~---~~~~~~  113 (376)
                      -.+.|+++.+++..++.....++.+.......... + .......++.||+| .++              +   ......
T Consensus        72 ~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~  151 (323)
T 1f1u_A           72 AAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELV  151 (323)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCC
T ss_pred             CCeeEEEEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEecccccccccccccCCCCCCc
Confidence            35679999999988887766666655333222222 1 12234566789999 111              1   013457


Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d  193 (376)
                      +|+|+.|.|+|++++.+|| ++|||++......+++.....|+.++..  ++.+++....       +.+++|++|.|+|
T Consensus       152 ~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~~-------~~~~~Hiaf~v~d  221 (323)
T 1f1u_A          152 RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGGN-------GPRMHHVAFATHE  221 (323)
T ss_dssp             EEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEESS-------BSEEEEEEEECSS
T ss_pred             eeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCCC-------CCCceEEEEECCC
Confidence            9999999999999999999 9999999877654444445678877654  3345555421       2388999999999


Q ss_pred             HHH---HHHHHHHcCC--eeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          194 VAK---TVDLVKAKGG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       194 ~d~---~~~rl~~~G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +++   ++++|+++|+  ++..+|..+..+.+.++||+||+||.||+....
T Consensus       222 ~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          222 KHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             HHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            888   9999999999  888777777766778999999999999998654

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.72  E-value=1e-16  Score=132.73  Aligned_cols=116  Identities=23%  Similarity=0.289  Sum_probs=89.9

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  188 (376)
                      .++..+|+||.|.|+|++++++||+++|||++..+.+  +.  ..+++..+..  +..+.+.+..      ...+..|++
T Consensus        23 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~--~~~~~~~~~~--~~~l~l~~~~------~~~~~~h~~   90 (141)
T 3ghj_A           23 PMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--AR--RWNFLWVSGR--AGMVVLQEEK------ENWQQQHFS   90 (141)
T ss_dssp             ---CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TT--TEEEEEETTT--TEEEEEEECC------SSCCCCEEE
T ss_pred             ceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CC--cEEEEEecCC--CcEEEEeccC------CCCCCceEE
Confidence            3456789999999999999999999999999987652  11  2456666543  4567777642      224678999


Q ss_pred             EEeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          189 IAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       189 f~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      |.|+  |+++++++|+++|+++. .|.....++++.+||+|||||.|||+.
T Consensus        91 ~~v~~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           91 FRVEKSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEECGGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEEeHHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            9997  99999999999999988 444444456789999999999999985

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.72  E-value=8.8e-17  Score=129.95  Aligned_cols=118  Identities=16%  Similarity=0.223  Sum_probs=89.6

Q ss_pred             ccceeeEEEEEEe--CChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEE
Q 017144          110 SDKRRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (376)
Q Consensus       110 ~~~~~i~Hv~l~v--~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi  187 (376)
                      ++..+|+||.|.|  +|++++++||+++|||++..+...... ....|+..++    ..+.+......    ...+..|+
T Consensus         6 m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~----~~l~l~~~~~~----~~~~~~~~   76 (126)
T 2qqz_A            6 NYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCGN----QEIHIGVEQNF----NPAKRAHP   76 (126)
T ss_dssp             CCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEETT----EEEEEEECTTC----CCCSSSCE
T ss_pred             cccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeCC----EEEEEEecCCC----CCCCceEE
Confidence            4677999999999  899999999999999998764321100 1235666653    24555553221    12578899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          188 GIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       188 ~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +|.|+|+++++++|+++|+++..+|. .  .+.+.+||+|||||.|||+++.
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~-~--~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           77 AFYVLKIDEFKQELIKQGIEVIDDHA-R--PDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEETTHHHHHHHHHHTTCCCEEECS-S--TTEEEEEEECTTSCEEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHcCCCccCCCC-C--CCeeEEEEECCCCCEEEEEeCC
Confidence            99999999999999999999887662 2  2578999999999999999864

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.72  E-value=4.7e-17  Score=135.99  Aligned_cols=127  Identities=17%  Similarity=0.219  Sum_probs=94.3

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC------CceEEEEEeeCCCCceEEEEEEecCCCCC-----
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELTYNYGVDK-----  177 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-----  177 (376)
                      .++.++|+||.|.|+|++++++||+++|||++......++      .....+++..++.   ..+++.......+     
T Consensus        14 ~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~l~~~~~~~~~~~~~   90 (156)
T 3kol_A           14 PGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDG---TILDLFGEPELSPPDPNP   90 (156)
T ss_dssp             TTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTS---CEEEEEECTTCCCSSSST
T ss_pred             ccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCC---CEEEEEecCCCCcCCCCC
Confidence            3456799999999999999999999999999875322111      0012466666542   3566666433211     


Q ss_pred             CCCCCCceEEEEEeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          178 YDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       178 ~~~~~g~~hi~f~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      .....++.|++|.|+  |+++++++|+++|+++..+|.+.++  ++.+||+|||||.|||++...
T Consensus        91 ~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           91 EKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             TCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            123468899999999  9999999999999999877777654  469999999999999998654

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.72  E-value=5e-17  Score=131.84  Aligned_cols=122  Identities=20%  Similarity=0.278  Sum_probs=91.7

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc-c------cCCCcee
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-Y------DKGNGYA  315 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~-~------~~g~g~~  315 (376)
                      .+++|+.|.|+|++++.+||+++|||++......++.+....++..+    +..+++....+... .      ..+.+.+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   79 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGMH   79 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCce
Confidence            35899999999999999999999999998665444444666677653    34566654332211 1      2456889


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEE--ECCCCCeEEEEec
Q 017144          316 QIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGWKSVFVDN  368 (376)
Q Consensus       316 hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~  368 (376)
                      |++|.|+|+++++++|+++|+++..++.....++.++.++  +|||||.|||+|.
T Consensus        80 hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           80 HICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999999999887754444333456666  8999999999973

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.71  E-value=8.8e-17  Score=133.24  Aligned_cols=122  Identities=41%  Similarity=0.718  Sum_probs=93.7

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .++.|+.|.|.|++++.+||+++|||++......+++.+.+.++..++...+..++|...........+.+.+|++|.|+
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~   86 (144)
T 2c21_A            7 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   86 (144)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             ceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEeC
Confidence            46899999999999999999999999998655434444666667654422246677765443323345678899999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |+++++++|+++|+++..+     .+...++|++|||||.|||++..
T Consensus        87 d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           87 DVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             CHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             CHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            9999999999999998765     22224559999999999999876

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.71  E-value=1.2e-16  Score=130.17  Aligned_cols=119  Identities=18%  Similarity=0.257  Sum_probs=88.4

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceE---EEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYT---NAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~---~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi  187 (376)
                      |..+|+|+.|.|+|++++++||+++|||++....+  +..+.   ..++..+.    ..+.+......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIAG----LWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEETT----EEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeCC----EEEEEecCCCC----CCCCeeEE
Confidence            45689999999999999999999999999865432  11100   11455442    35666654221    14678899


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          188 GIAVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       188 ~f~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      +|.|+  |+++++++++++|+++..+|....+ +++.+||+|||||.|||++...
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSSC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCCh
Confidence            99995  9999999999999999887765543 4578999999999999998654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.71  E-value=6.1e-17  Score=150.97  Aligned_cols=178  Identities=17%  Similarity=0.241  Sum_probs=124.0

Q ss_pred             chhhhhccccCCccccccchHHHHHHcCcccccccC----CCccCCccccCccc-cccccc------------------c
Q 017144           54 LALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTS----GNMAPTSNTVTEQN-VLDWVK------------------S  110 (376)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~p~~-~~~~~~------------------~  110 (376)
                      -.+.|+++.+++..++.....++.+..........+    .......++.||+| .++...                  .
T Consensus        59 ~~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~  138 (300)
T 2zyq_A           59 DRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVT  138 (300)
T ss_dssp             CEEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCC
T ss_pred             CCcceEEEEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEcCCcCCCCCccCCCccccc
Confidence            356799999998877777666776653332222111    12234556789998 222111                  2


Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC--------C-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCC
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--------D-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  181 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~--------~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~  181 (376)
                      ...+|+||.|.|+|++++++||+++|||++......+.        + .....|+..+..  ++.+.+....      ..
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~--~~~~~~~~~~------~~  210 (300)
T 2zyq_A          139 GEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR--HHSLAFLPMP------TS  210 (300)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB--SCSEEEESSC------CS
T ss_pred             CCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC--ccEEEEecCC------CC
Confidence            34689999999999999999999999999976543221        1 234567766543  2234554421      23


Q ss_pred             CCceEEEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          182 TGFGHFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       182 ~g~~hi~f~V~d~d~---~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .+++|++|.|+|+++   ++++|+++|+++..+|...+.+.++++||+|||||.|||+...
T Consensus       211 ~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          211 SGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            678999999999665   5999999999998877777655678999999999999999754

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.71  E-value=8.3e-17  Score=132.58  Aligned_cols=119  Identities=16%  Similarity=0.242  Sum_probs=86.8

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCce-EEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRY-TNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~-~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      |.++|+|+.|.|+|++++++||+++|||++..+.+...... ...++..++    ..+.+......+    ..+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~----~~l~l~~~~~~~----~~~~~h~~~   72 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEKLA----ERSYNHIAF   72 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCCCS----SCCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECC----EEEEEEeCCCCC----CCCeeEEEE
Confidence            45789999999999999999999999999876543111000 011455442    356666542211    457889999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          190 AVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       190 ~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .|+  |+++++++|+++|+++..+|...++ +++.+||+|||||.|||++.
T Consensus        73 ~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~  122 (139)
T 1r9c_A           73 KIDDADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTG  122 (139)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             EcCHHHHHHHHHHHHHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeC
Confidence            999  9999999999999998876655543 56789999999999999965

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.71  E-value=4.4e-17  Score=137.41  Aligned_cols=123  Identities=24%  Similarity=0.335  Sum_probs=94.7

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC--------------CCceEEEEEeeCCCCceEEEEEEecCC
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--------------EDRYTNAFLGYGPEDSHFVVELTYNYG  174 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~l~l~~~~~  174 (376)
                      ..+.++|+||+|.|+|++++++||+++|||++..+...+              +.....+++..++    ..+++.....
T Consensus        14 ~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~----~~leL~~~~~   89 (159)
T 3gm5_A           14 ILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGP----LQLELIEPDE   89 (159)
T ss_dssp             CCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETT----EEEEEEEECS
T ss_pred             ccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCC----EEEEEEEECC
Confidence            445679999999999999999999999999976544332              1334667777653    4677776533


Q ss_pred             CCC-C-----CCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCC--CCEEEEeec
Q 017144          175 VDK-Y-----DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD--GYKFELLER  238 (376)
Q Consensus       175 ~~~-~-----~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPd--G~~iel~~~  238 (376)
                      .+. +     ..+.|++|++|.|+|+++++++|+++|+++...+ +.  ++.+++|+.|||  |+.|||+|.
T Consensus        90 ~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~-~~--~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           90 NPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKG-DF--EGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             SSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEE-EE--TTEEEEEESCHHHHSSEEEEEEE
T ss_pred             CCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeecc-cc--CCeeEEEEeccccCcEEEEEEec
Confidence            221 1     1357899999999999999999999999987653 22  257899999999  999999985

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.71  E-value=1e-16  Score=129.20  Aligned_cols=119  Identities=24%  Similarity=0.307  Sum_probs=93.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc--cccCCCceeEEEEEe
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--EYDKGNGYAQIAIGT  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~--~~~~g~g~~hiaf~V  321 (376)
                      ++.|+.|.|.|++++.+||+++|||++......++.++...++..++   +..++|....+..  +...+.+.+|++|.|
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v   79 (127)
T 3e5d_A            3 KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIST   79 (127)
T ss_dssp             CCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEEC
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEEc
Confidence            58899999999999999999999999987654444456666666532   4667776543222  122456789999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          322 DD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       322 ~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      +|   +++++++++++|+++..+|...+.+ .+.+|++|||||.|||+
T Consensus        80 ~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           80 GTKEAVDELTEKLRQDGFAIAGEPRMTGDG-YYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCeEecCcccCCCC-cEEEEEECCCCCEEEEe
Confidence            99   8899999999999999887665553 47899999999999996

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.71  E-value=1.1e-16  Score=127.85  Aligned_cols=115  Identities=19%  Similarity=0.161  Sum_probs=84.9

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      .+++.|+.|.|+|++++++||+++|||++....+      ..+++..++.    .+.+......+....+.+ .|++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~----~l~l~~~~~~~~~~~~~~-~~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSH----CLMLSQNHLVPLENFQSG-IIIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTE----EEEEESSCSSSCCCCCSC-EEEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC------CEEEEEeCCe----EEEEEcCCCCCcccCCCe-EEEEEEE
Confidence            3589999999999999999999999999865322      1345555532    233332211111122334 4799999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       192 ~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +|+++++++|+++|+++..+|.+.+. +.+.++|+|||||.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence            99999999999999998877777664 45788999999999999874

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.71  E-value=1.5e-16  Score=129.01  Aligned_cols=120  Identities=21%  Similarity=0.300  Sum_probs=91.9

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEccc-------CCCc---ccc-CC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYN-------HGVT---EYD-KG  311 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~-------~~~~---~~~-~g  311 (376)
                      .+++|+.|.|+|++++.+||+++|||++......++......++..+    ...++|..+       ....   ... .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCCC
Confidence            45899999999999999999999999998765544444445556643    346666552       1111   112 45


Q ss_pred             CceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          312 NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       312 ~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      .+..|++|.|+|+++++++|+++|+++..++...+.+ .+.+|++|||||.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTG-KKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSC-CEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCc-eEEEEEECCCCCEEEEeC
Confidence            6889999999999999999999999988665544443 589999999999999986

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.70  E-value=7.2e-17  Score=151.52  Aligned_cols=173  Identities=15%  Similarity=0.192  Sum_probs=126.1

Q ss_pred             cchhhhhccccCCccccccchHHHHHHcCccccccc---CCCccCCccccCccc-ccccc--------------ccccee
Q 017144           53 RLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEAST---SGNMAPTSNTVTEQN-VLDWV--------------KSDKRR  114 (376)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~p~~-~~~~~--------------~~~~~~  114 (376)
                      .-.+.|+++.+++..++.....++.+..........   ........++.||+| .++..              ....++
T Consensus        62 ~~~~~~~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~  141 (310)
T 3b59_A           62 ENRIDVIALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVK  141 (310)
T ss_dssp             SCEEEEEEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCE
T ss_pred             CCCeeEEEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEcccccCCCccCCCCCcCcE
Confidence            345678999998888887777777655333222211   111233456789999 11111              134679


Q ss_pred             eEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCH
Q 017144          115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  194 (376)
Q Consensus       115 i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~  194 (376)
                      |+||+|.|+|++++++||+++|||++..+.+  +   ...|+.++..  ++.+.+...       . .|++|++|.|+|+
T Consensus       142 l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~--~~~l~l~~~-------~-~g~~hi~f~v~d~  206 (310)
T 3b59_A          142 ISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSA--HHRIAILPG-------P-PCLNHVAYDMLSV  206 (310)
T ss_dssp             EEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSB--SCSEEEEES-------S-SEEEEEEEECSSH
T ss_pred             eceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCC--cceEEEECC-------C-CceEEEEEEcCCH
Confidence            9999999999999999999999999987542  1   3577777544  334555542       1 5789999999997


Q ss_pred             HHH---HHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          195 AKT---VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       195 d~~---~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      +++   +++|+++|+++..+|.++..+.++++||+||+||.||+.+...
T Consensus       207 d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          207 DDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             HHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            776   9999999999988888776667789999999999999998653

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.70  E-value=1.5e-16  Score=129.87  Aligned_cols=115  Identities=14%  Similarity=0.051  Sum_probs=88.3

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      ..+++||.|.|+|++++++||+++|||++....+      ..+.+..++   ...+.+....... .....+..|++|.|
T Consensus        11 ~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~~v   80 (132)
T 3sk2_A           11 TITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSG---DALFAIWSGGEEP-VAEIPRFSEIGIML   80 (132)
T ss_dssp             CCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECST---TCEEEEESSSCCC-CTTSCCCEEEEEEE
T ss_pred             cceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCC---CcEEEEEeCCCCC-cCCCCCcceEEEEe
Confidence            4589999999999999999999999999865432      123343332   2356666543211 12345788999999


Q ss_pred             CC---HHHHHHHHHH---cCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          192 ED---VAKTVDLVKA---KGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       192 ~d---~d~~~~rl~~---~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +|   +++++++|++   +|+++..+|.+.+.  ++.++|+|||||.|||.+.
T Consensus        81 ~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~--g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           81 PTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVF--GRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SSHHHHHHHHHHHHHCSSSCCEEEEEEEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHhhhcCCCEEeeCCcccCc--eEEEEEECCCCCEEEEEeC
Confidence            87   9999999999   99999888887765  3899999999999999874

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.70  E-value=2.3e-16  Score=128.13  Aligned_cols=123  Identities=20%  Similarity=0.262  Sum_probs=92.9

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      ...+.|+.|.|.|++++.+||+++|||++......+. ...+..+..+.  ....+.+.............+..|++|.|
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~v   87 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDP-NMRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLIT   87 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEET-TEEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCC-CceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEEe
Confidence            3578999999999999999999999999986543222 23444444322  24556665432111122345778999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          322 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       322 ~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +|+++++++|+++|+++..+|...+.+. +.+|++||+||.|||+|.
T Consensus        88 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           88 RDIDEAYKTLTERGVTFTKPPEMMPWGQ-RATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             SCHHHHHHHHHHTTCEESSSCEECTTSC-EEEEEECTTCEEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCEeecCCCcCCCCC-EEEEEECCCCCEEEEEeC
Confidence            9999999999999999998888777653 899999999999999873

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.70  E-value=3.5e-16  Score=135.26  Aligned_cols=129  Identities=36%  Similarity=0.607  Sum_probs=95.5

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCC---------------CceEEEEEEecCCC
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------------DSHFVVELTYNYGV  175 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~---------------~~~~~l~l~~~~~~  175 (376)
                      ..++++|+.|.|+|++++++||+++|||++..+...++..+..++++.+..               ..+..+++......
T Consensus        28 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~  107 (184)
T 2za0_A           28 KDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGT  107 (184)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCC
Confidence            356999999999999999999999999999876543333455666665421               01346666653221


Q ss_pred             ---C--CCC----CCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          176 ---D--KYD----IGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       176 ---~--~~~----~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                         +  .+.    ...|+.|++|.|+|+++++++|+++|+++..+|...++  ++.+||+|||||.|||++....
T Consensus       108 ~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          108 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             GGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             CCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcc
Confidence               1  111    12578999999999999999999999999877765432  3578999999999999987643

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.70  E-value=4.1e-16  Score=127.71  Aligned_cols=113  Identities=22%  Similarity=0.361  Sum_probs=87.7

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      |+++|+||.|.|+|++++++||+++|||++....+      ...++..+.    ..+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGS----LWLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETT----EEEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC------CceEEecCC----EEEEEEeCCCC--CCCCCCcceEEEE
Confidence            45789999999999999999999999999976542      134566543    24555554221  1234578899999


Q ss_pred             eC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          191 VE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       191 V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |+  |+++++++|+++|+++..+|..    +++.+||+|||||.|||++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC----CeEEEEEECCCCCEEEEEECC
Confidence            98  9999999999999998876542    357899999999999999654

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.70  E-value=6.1e-17  Score=131.99  Aligned_cols=121  Identities=18%  Similarity=0.174  Sum_probs=91.4

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEecee-cCCCCCeEEEEeecCCCCCceEEEEcccCCCc-cc----cCCCceeE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKR-DNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-EY----DKGNGYAQ  316 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~~----~~g~g~~h  316 (376)
                      .+++|+.|.|+|++++++||+ +|||++.... ..+..+....++..+    ...++|....... ..    ..+.+++|
T Consensus         6 ~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g~~h   80 (133)
T 3hdp_A            6 LKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGSTPYH   80 (133)
T ss_dssp             CCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCEEEE
T ss_pred             eeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCceEE
Confidence            468999999999999999999 9999987542 223444566666643    4567776543221 11    12678899


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCccCC-CCCceEEEEECCCCCeEEEEec
Q 017144          317 IAIGTDDVYKTAEAIKLSGGKITREPGPLP-GINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       317 iaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~-~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      ++|.|+|+++++++|+++|+++..+|.+.. ..+.+++|++|||||.|||+|+
T Consensus        81 iaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           81 ICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            999999999999999999999987654322 1225899999999999999984

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.70  E-value=1.7e-16  Score=150.56  Aligned_cols=172  Identities=11%  Similarity=0.036  Sum_probs=119.3

Q ss_pred             hhhhhccccCCccccccchHHHHHHcCcccccccCCCccCCccccCccc-ccc-----------ccc------ccceeeE
Q 017144           55 ALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQN-VLD-----------WVK------SDKRRML  116 (376)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~~~-----------~~~------~~~~~i~  116 (376)
                      .+.|+|+.||+. ++.....+|.+. |..... .++......++.||+| .++           |..      ..+.+|+
T Consensus        79 ~~~hiaf~V~~~-dl~~~~~rL~~~-Gv~~~~-~~~~g~~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~  155 (335)
T 3oaj_A           79 QVGVTSYVVPKG-AMAFWEKRLEKF-NVPYTK-IERFGEQYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFG  155 (335)
T ss_dssp             EEEEEEEEECTT-CHHHHHHHHHHT-TCCCEE-EEETTEEEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEE
T ss_pred             ceEEEEEEecHH-HHHHHHHHHHhC-cceeee-eccCCcEEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhcccc
Confidence            578999999987 777777776654 544333 3333455677889999 111           211      1357999


Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCC-CCceEEEEEeCC--
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG-TGFGHFGIAVED--  193 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~-~g~~hi~f~V~d--  193 (376)
                      ||+|.|+|++++.+||+++|||++..+.+      ..+.+..+...  ..+.+......+....+ .+++|+||.|+|  
T Consensus       156 Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~------~~~~~~~g~~~--~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~  227 (335)
T 3oaj_A          156 GATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDI--GNVIDLKLTPIGRGQMGAGTVHHIAWRANDDE  227 (335)
T ss_dssp             EEEEECSSHHHHHHHHHHTSCCEEEEEET------TEEEEECSSSS--SCEEEEESSCCCBCBCSBTEEEEEEEEESSHH
T ss_pred             ceEEEECCHHHHHHHHHHHhCCEEeeccC------CEEEEEeCCCC--cEEEEEeCCCCCcCCCCCcceEEEEEEcCCHH
Confidence            99999999999999999999999987643      12333334332  23445543332222223 358999999998  


Q ss_pred             -HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          194 -VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       194 -~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                       ++++.++|+++|+++... .+.  +..+++||+||+|+.|||....|
T Consensus       228 ~l~~~~~~L~~~G~~~~~~-~~r--~~~~siYfrDP~G~~iEl~td~p  272 (335)
T 3oaj_A          228 DQLDWQRYIASHGYGVTPV-RDR--NYFNAIYFREHGEILFEIATDPP  272 (335)
T ss_dssp             HHHHHHHHHHHTTCCCCCC-EEC--SSSEEEEEECTTSCEEEEEESCS
T ss_pred             HHHHHHHHHHHCCCCcccc-ccC--CcEEEEEEECCCCcEEEEEeCCC
Confidence             566889999999986533 333  24578999999999999998754

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.69  E-value=1.9e-16  Score=132.33  Aligned_cols=121  Identities=15%  Similarity=0.089  Sum_probs=87.2

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-CCCCCceEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-DIGTGFGHFGI  189 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-~~~~g~~hi~f  189 (376)
                      |+++|+||.|.|+|++++++||+++|||++....+      ..+++..++   ...+.+.......+. ....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTT---SCEEEEEEGGGCSSCCC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCC---CcEEEEecCCcCCccccCCCCeEEEEE
Confidence            45689999999999999999999999999866532      234555432   235666554322221 22356789999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCC
Q 017144          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (376)
Q Consensus       190 ~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  242 (376)
                      .|+|   +++++++|+++|+++..+|.+.+.  ++.+||+|||||.|||++..+..
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~~a  127 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDF--GYTFVGVDPDEHRLRIFCLKRTA  127 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETT--EEEEEEECTTCCEEEEEEEC---
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCC--CcEEEEECCCCCEEEEEEcChhH
Confidence            9987   999999999999999888887765  38899999999999999887653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.69  E-value=6.4e-16  Score=127.52  Aligned_cols=115  Identities=24%  Similarity=0.391  Sum_probs=88.2

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC-CCCCCCCCceEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-DKYDIGTGFGHFGI  189 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~~~~~~~g~~hi~f  189 (376)
                      |+++|+||.|.|+|++++++||+++|||++....+      ...++..+.    ..+.+...... .......+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGD----LWVCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETT----EEEEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC------CcEEEEECC----EEEEEEECCCCCCCCCCCCCceEEEE
Confidence            45689999999999999999999999999976542      135666553    24555553221 11123457889999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          190 AVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       190 ~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .|+  |+++++++|+++|+++..+|..    +++.+||+|||||.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECc
Confidence            997  8999999999999998776532    457899999999999999764

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.68  E-value=1.8e-16  Score=126.52  Aligned_cols=115  Identities=19%  Similarity=0.215  Sum_probs=86.7

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      +...++ |+.|.|+|++++++||+++|||++....+      ..+++..+.. ..+.+.+.....     ...+..|++|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~~-~~~~l~l~~~~~-----~~~~~~~~~~   70 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDHG------WIVTHASPLE-AHAQVSFAREGG-----SGTDVPDLSI   70 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEECS------SEEEEEEEEE-EEEEEEEESSSB-----TTBCCCSEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecCC------EEEEEecCCC-CcEEEEEEcCCC-----CCCceeEEEE
Confidence            345678 99999999999999999999999876421      2334443321 134555554321     1245679999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       190 ~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .|+|+++++++|+++|+++..+|.+.+. +.+.+|++|||||.|||+++
T Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           71 EVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EESCHHHHHHHHHHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHHCCCccccCCccCCC-ccEEEEEECCCCCEEEEEec
Confidence            9999999999999999998877777664 36889999999999999975

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.68  E-value=1.6e-15  Score=133.96  Aligned_cols=208  Identities=13%  Similarity=0.089  Sum_probs=139.2

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEE---EE
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF---GI  189 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi---~f  189 (376)
                      ....+.+|+|.|++++.+||+++|||++..+..      ..+.++.+.....+.++-.+  .... ....|+-|+   ++
T Consensus         9 ~~~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp--~~~~-~~~~Glkh~a~i~i   79 (244)
T 3e0r_A            9 IVRIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAP--SMRT-RKVEGRKKLARLIV   79 (244)
T ss_dssp             EEEEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECC--TTTC-BCCCSSCSEEEEEE
T ss_pred             eEEEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCC--Cccc-ccccccceeeeEEE
Confidence            356789999999999999999999999988775      56777765443333333322  2211 223577676   59


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC----------------------CCCccc
Q 017144          190 AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT----------------------PEPLCQ  247 (376)
Q Consensus       190 ~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~----------------------~~~~~~  247 (376)
                      .|++..++..-|.. +.++   |....+..++.+|+.||+||.||+....+.                      ...+ |
T Consensus        80 ~vp~~~el~~lL~~-~~~~---~~~~~gdhgyA~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~  154 (244)
T 3e0r_A           80 KVENPLEIEGILSK-TDSI---HRLYKGQNGYAFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-S  154 (244)
T ss_dssp             EESSHHHHHHHHTT-CSCC---SEEEECSSSEEEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-E
T ss_pred             EcCCHHHHHHHHhc-cccc---ccccccCCcEEEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-E
Confidence            99998886665544 5443   222234467789999999999999943321                      1237 9


Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC--CHH
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD--DVY  325 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~--Dl~  325 (376)
                      +.|+|+|.+++  ||++ +|+.           ..+.|....+.+           -..+.+.--|+-.+-|.|+  |+.
T Consensus       155 I~LnV~d~~~s--Fy~~-~~~~-----------~~~~F~~a~G~d-----------l~~~~~~t~gLe~l~~~v~~~dl~  209 (244)
T 3e0r_A          155 MELHLPTDIES--FLES-SEIG-----------ASLDFIPAQGQD-----------LTVDNTVTWDLSMLKFLVNELDIA  209 (244)
T ss_dssp             EEEEECTTCCC--SCCH-HHHT-----------TTEEEEECCCTT-----------TTCCTTSBSSEEEEEEEESSCCHH
T ss_pred             EEEEcCchHHH--Hhhc-cCCc-----------ccEEEEcccCCC-----------CCCCCCCccCceEEEEEeCHHHHH
Confidence            99999999998  9976 4441           112333321110           0011123347788888885  578


Q ss_pred             HHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          326 KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       326 ~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      +..++|++.|..+...        .+++.+.||+|+.|+|.+
T Consensus       210 ~l~~~L~~~g~~idkk--------~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          210 SLRQKFESTEYFIPKS--------EKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHHHHTTTSCEECCTT--------CCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHhCCceEccc--------CCEEEEECCCCCEEEEEE
Confidence            8999999887643321        478999999999999975

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.68  E-value=4.7e-16  Score=129.47  Aligned_cols=120  Identities=22%  Similarity=0.307  Sum_probs=88.3

Q ss_pred             ccccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC---CCCCCCCCc
Q 017144          108 VKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV---DKYDIGTGF  184 (376)
Q Consensus       108 ~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~~~~~~g~  184 (376)
                      ..++..+|+||.|.|+|++++++||+++|||++....+      ...++..++.    .+.+......   .......|.
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~l~~g~~----~l~l~~~~~~~~~~~~~~~~g~   90 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFGDQ----KFNLHEVGKEFEPKAAHPVPGS   90 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETTE----EEEEEETTSCCSSCCSSCCTTC
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC------CceEEEECCc----EEEEEEcCCCcCcccCCCCCCC
Confidence            34567899999999999999999999999999985432      1344555532    3444442111   111234577


Q ss_pred             eEEEEEeC-CHHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEEcCCCCEEEEee
Q 017144          185 GHFGIAVE-DVAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       185 ~hi~f~V~-d~d~~~~rl~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~  237 (376)
                      .|++|.+. |+++++++|+++|+++..+|....+  +..+.+||+|||||.|||.+
T Consensus        91 ~~~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           91 LDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             CEEEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             ceEEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            88999886 9999999999999998766655433  23468999999999999986

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.68  E-value=1e-15  Score=123.62  Aligned_cols=113  Identities=12%  Similarity=0.035  Sum_probs=87.1

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      +.....|+.|.|+|++++++||+++|||++..+.    .  ..+++..+    ...+.+......    ...+..|++|.
T Consensus         2 ~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~--~~~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~   67 (124)
T 1xrk_A            2 AKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE----D--DFAGVVRD----DVTLFISAVQDQ----VVPDNTQAWVW   67 (124)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC----S--SEEEEEET----TEEEEEEECSCT----TTGGGCEEEEE
T ss_pred             CcccceeEEEEcCCHHHHHHHHHHccCceEEecC----C--CEEEEEEC----CEEEEEEcCCCC----CCCCceEEEEE
Confidence            4457789999999999999999999999997652    1  23445544    234556553221    11334699999


Q ss_pred             eCCHHHHHHHHHHc------CC--eeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          191 VEDVAKTVDLVKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       191 V~d~d~~~~rl~~~------G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |+|+++++++++++      |+  ++..+|.+.++ + +.++++|||||.|||.+..
T Consensus        68 v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           68 VRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPW-G-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETT-E-EEEEEECTTCCEEEEEEC-
T ss_pred             ECCHHHHHHHHHHhcccccCCccccccCCceecCC-C-CEEEEECCCCCEEEEEEec
Confidence            99999999999999      99  88888887765 3 8999999999999999764

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.68  E-value=2.8e-16  Score=130.63  Aligned_cols=117  Identities=18%  Similarity=0.210  Sum_probs=89.8

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCC-CCCCCceEEEEE
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKY-DIGTGFGHFGIA  190 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~-~~~~g~~hi~f~  190 (376)
                      +.++.|+.|.|+|++++++||+++|||++..+.+      ..+++..++   ...+.+.......+. ..+.+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP------TFSLFVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET------TEEEEECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC------CeEEEEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEE
Confidence            3489999999999999999999999999876542      134555543   235666654332222 234578899999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       191 V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |+|   +++++++|+++|+++..+|...++  ++.+||+|||||.|||+++.
T Consensus        94 v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           94 VENDAQVDETFAGWKASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            984   789999999999999888877654  48899999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.68  E-value=3.4e-16  Score=145.30  Aligned_cols=176  Identities=20%  Similarity=0.213  Sum_probs=122.3

Q ss_pred             hhhhhccccCCccccccchHHHHHHcCccccccc----CCCccCCccccCccc-ccccc------------c--------
Q 017144           55 ALFQLGAAIPQSHFFGAKALKLLRAEGSTIEAST----SGNMAPTSNTVTEQN-VLDWV------------K--------  109 (376)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~p~~-~~~~~------------~--------  109 (376)
                      .+.|+++.+++..++.....++.+..........    ........++.||+| .++..            .        
T Consensus        58 ~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~  137 (292)
T 1kw3_B           58 DLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFV  137 (292)
T ss_dssp             EEEEEEEECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBC
T ss_pred             CccEEEEEECCHHHHHHHHHHHHHcCCeEeecCcccccccCceEEEEEECCCCCEEEEEECccccccCCCCCCCCccccc
Confidence            4679999999888887777777665333222211    112234556789998 11110            0        


Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC--CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceE
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~h  186 (376)
                      +..++|+||.|.|+|++++++||+++|||++......+  ++ .....|+..+..  ++.+.+...+      ...+++|
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~h  209 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAFP------IPKRIHH  209 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECCS------CSSSEEE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecCC------CCCceEE
Confidence            23468999999999999999999999999997653321  11 124567776543  2234454321      1367899


Q ss_pred             EEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCC-EEEEeecC
Q 017144          187 FGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY-KFELLERG  239 (376)
Q Consensus       187 i~f~V~d~d~---~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~~  239 (376)
                      ++|.|+|+++   ++++|+ +|+++..+|...+.+..+++||+||||| .|||....
T Consensus       210 iaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          210 FMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            9999998765   667899 9999988888877666788999999999 99999754

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.67  E-value=8.5e-16  Score=145.47  Aligned_cols=166  Identities=19%  Similarity=0.301  Sum_probs=119.2

Q ss_pred             hhhhhccccCCccccccchHHHHHHcCcccccccCCCccCCccccCccc-ccccccc---cceeeEEEEEEeCChhHHHH
Q 017144           55 ALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQN-VLDWVKS---DKRRMLHVVYRVGDLDKTIK  130 (376)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~---~~~~i~Hv~l~v~Dl~~a~~  130 (376)
                      .+.|+++.|++.      . ..++..|.......+    ...++.||+| .++..+.   ....+.||.|.|+|++++++
T Consensus       107 g~~hiaf~V~d~------~-~~l~~~G~~~~~~~~----~~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~Dl~~a~~  175 (330)
T 3zi1_A          107 DFMGITLASSQA------V-SNARKLEWPLTEVAE----GVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLN  175 (330)
T ss_dssp             SEEEEEEECHHH------H-HHHHHHTCCCEEEET----TEEEEECTTSCEEEEESSCCTTSCSEEEEEEEESCHHHHHH
T ss_pred             CeeEEEEECchH------H-HHHHHcCCceeccCC----ceEEEECCCCCEEEEEecCCCCCCceeEEEEECCCHHHHHH
Confidence            568999998874      2 333445654433332    2677889999 3333222   34579999999999999999


Q ss_pred             HHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC--CHHHHHHHHHHcCCee
Q 017144          131 FYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE--DVAKTVDLVKAKGGKV  208 (376)
Q Consensus       131 FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~--d~d~~~~rl~~~G~~i  208 (376)
                      ||+++|||++..+....    ..+|+.+++.  ++.+++.....  +...+.++.|++|.|+  |+++++++|+++|+++
T Consensus       176 FY~~vLG~~~~~~~~~~----~~~~l~~g~~--~~~l~l~~~~~--~~~~~~~~~hiaf~v~~~dld~~~~rl~~~G~~i  247 (330)
T 3zi1_A          176 YWCNLLGMKIYENDEEK----QRALLGYADN--QCKLELQGVKG--GVDHAAAFGRIAFSCPQKELPDLEDLMKRENQKI  247 (330)
T ss_dssp             HHHHTTCCEEEEEETTT----TEEEEESSTT--SCEEEEEECSS--CCCCBTTCCEEEEEECGGGHHHHHHHHHHTTCEE
T ss_pred             HHHHhcCCEEEeeccCC----cEEEEEeCCc--eEEEEECCCCC--CCCCCCCCceEEEEEEcccHHHHHHHHHHcCCcE
Confidence            99999999998776432    1467777765  34566654432  2223467889999996  7899999999999998


Q ss_pred             ecCCeec--C-CCCeEEEEEEcCCCCEEEEeecC
Q 017144          209 TREPGPV--K-GGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       209 ~~~p~~~--~-~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      ..+|.+.  + ..+.+.+||+||||+.|||++..
T Consensus       248 ~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          248 LTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             EEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             ecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence            7776653  1 12568999999999999999753

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.67  E-value=3.1e-16  Score=130.96  Aligned_cols=120  Identities=19%  Similarity=0.298  Sum_probs=90.4

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC----C-CCCCCCCc
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV----D-KYDIGTGF  184 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~----~-~~~~~~g~  184 (376)
                      ||..+|.|+.|.|+|++++++||+++|||++....+      ..+++..+.    ..+.+......    . +...+.+.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~   70 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRNP------EIIFYQMNG----FVLATWLVQNLQEDVGVAVTSRPGS   70 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEECS------SEEEEECSS----SEEEEEEHHHHHHHHSSCCCSSCCS
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCCC------CEEEEEcCC----EEEEEEeccccccccCCCCCCCCCe
Confidence            356789999999999999999999999999865431      245565542    34566653210    0 11124577


Q ss_pred             eEEEEEe---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          185 GHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       185 ~hi~f~V---~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      .|++|.|   +|+++++++|+++|+++..+|.+.+. +.+.+||+|||||.|||++...
T Consensus        71 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           71 MALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPH-GGLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             CEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTT-SSEEEEEECTTCCEEEEEECTT
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCC-CCEEEEEECCCCCEEEEEeCCC
Confidence            8999999   89999999999999999887776654 3589999999999999998643

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.67  E-value=1.8e-15  Score=123.54  Aligned_cols=117  Identities=21%  Similarity=0.243  Sum_probs=85.5

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      .++|+||.|.|+|++++++||+++|||++....+      ..+.+..+..  .  +.+......... ...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~--~--~~l~~~~~~~~~-~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGD--Q--LVCHLSDRWDRE-VSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTE--E--EEEEECSCSCSS-CCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCC--E--EEEEEcCccccc-CCCCCCeEEEEE
Confidence            4589999999999999999999999999965432      2334443321  2  333332211111 234678999998


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeec--C-CCCeEEEEEEcCCCCEEEEeecC
Q 017144          192 E---DVAKTVDLVKAKGGKVTREPGPV--K-GGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       192 ~---d~d~~~~rl~~~G~~i~~~p~~~--~-~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +   |+++++++|+++|+++..+|...  . .+..+.+||+|||||.|||.+..
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            6   49999999999999987777664  1 24568899999999999999764

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.67  E-value=1.3e-15  Score=146.10  Aligned_cols=180  Identities=15%  Similarity=0.163  Sum_probs=133.5

Q ss_pred             cccccchhhhhccccCCccccccchHHHHHHcCcccccc---cCCCccCCccccCccc-ccccc----------------
Q 017144           49 STSRRLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEAS---TSGNMAPTSNTVTEQN-VLDWV----------------  108 (376)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~p~~-~~~~~----------------  108 (376)
                      ..+.+-.+.|+|+.+++...+.....+|.+. |......   ..+......++.||+| .++..                
T Consensus        67 ~~~~~~gl~~~a~~v~s~~dLd~~~~~L~~~-Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~  145 (365)
T 4ghg_A           67 TKGPVAALKAMAFRVRTPEDVDKAEAYYQEL-GCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLY  145 (365)
T ss_dssp             EECSSCEEEEEEEEESSHHHHHHHHHHHHHT-TCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTC
T ss_pred             ccCCCCCcceEEEEeCCHHHHHHHHHHHHHc-CCcceeccccccCCCceEEEEECCCCCEEEEEEEeecccccccccccc
Confidence            3344557889999999998887777666654 4333222   2234455677889999 22221                


Q ss_pred             -cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEE
Q 017144          109 -KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHF  187 (376)
Q Consensus       109 -~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi  187 (376)
                       .....+|+||+|.|+|++++.+||++ |||++++....+++.....|++++..++  .+.+...       ...+++|+
T Consensus       146 ~~~~~~rlgHV~L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH--~la~~~~-------~~~~lhHv  215 (365)
T 4ghg_A          146 SAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVH--DTALTGG-------NGPRLHHV  215 (365)
T ss_dssp             CTTCCCEEEEEEEEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSC--SEEEEES-------SBSEEEEE
T ss_pred             ccccCcceeEEEEeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCccc--ceeeecC-------CCCceeEE
Confidence             12346899999999999999999976 9999998877666666788999876643  3444442       23589999


Q ss_pred             EEEeCCHHHH---HHHHHHcCCe--eecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          188 GIAVEDVAKT---VDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       188 ~f~V~d~d~~---~~rl~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +|+|+|++++   .++|+++|+.  +..+|+++..+...++||+||+|+.||+....
T Consensus       216 af~v~d~d~v~~~~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g  272 (365)
T 4ghg_A          216 AFSTHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQD  272 (365)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             EEecCCHHHHHHHHHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCC
Confidence            9999997754   5678888874  56788998878889999999999999998654

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.66  E-value=2.1e-16  Score=133.79  Aligned_cols=123  Identities=20%  Similarity=0.328  Sum_probs=94.3

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc-cc-----cCCCceeE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-EY-----DKGNGYAQ  316 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~~-----~~g~g~~h  316 (376)
                      .+++|+.|.|.|++++++||+++|||++......++.+..+.++..+    ...++|....... ..     ..+.|++|
T Consensus         7 ~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~H   82 (161)
T 3oa4_A            7 NKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIHH   82 (161)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEEE
T ss_pred             CcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeEE
Confidence            56899999999999999999999999998765444445667777653    3566766543221 11     24678999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecC-CccCCCCCceEEEE--ECCCCCeEEEEeccc
Q 017144          317 IAIGTDDVYKTAEAIKLSGGKITRE-PGPLPGINTKITAC--LDPDGWKSVFVDNLD  370 (376)
Q Consensus       317 iaf~V~Dl~~~~~~l~~~G~~~~~~-p~~~~~~~~~~~~~--~DPdG~~iel~~~~~  370 (376)
                      ++|.|+|+++++++|+++|+++..+ |...+.+ .+++|+  +||||+.|||++..+
T Consensus        83 iaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g-~~~~f~~~~DPdG~~iEl~~~~~  138 (161)
T 3oa4_A           83 IAIGVKSIEERIQEVKENGVQMINDEPVPGARG-AQVAFLHPRSARGVLYEFCEKKE  138 (161)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCBSCSSCEECGGG-CEEEEBCGGGTTTCCEEEEECCC
T ss_pred             EEEEECCHHHHHHHHHHCCCEecccCcccCCCC-cEEEEEeccCCCeEEEEEEecCC
Confidence            9999999999999999999999876 4333322 366777  499999999999874

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.66  E-value=4e-16  Score=145.18  Aligned_cols=177  Identities=20%  Similarity=0.205  Sum_probs=122.9

Q ss_pred             chhhhhccccCCccccccchHHHHHHcCcccccccC----CCccCCccccCccc-ccc----------ccc---------
Q 017144           54 LALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTS----GNMAPTSNTVTEQN-VLD----------WVK---------  109 (376)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~p~~-~~~----------~~~---------  109 (376)
                      -.+.|+++.+++..++.....++.+..........+    .......++.||+| .++          +..         
T Consensus        57 ~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~  136 (297)
T 1lgt_A           57 DDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGF  136 (297)
T ss_dssp             CEEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCB
T ss_pred             CCccEEEEEeCCHHHHHHHHHHHHHCCCeEEeCCccccccCCceeEEEEECCCCCEEEEEECccccccCCccCCCccccc
Confidence            356799999998777777777776653333222111    12334567789999 111          111         


Q ss_pred             -ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC--CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCce
Q 017144          110 -SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  185 (376)
Q Consensus       110 -~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~  185 (376)
                       ....+|+|+.|.|+|++++++||+++|||++......+  .+ .....|+..+..  ++.+.+...+      ...+++
T Consensus       137 ~~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~l~~~~------~~~~~~  208 (297)
T 1lgt_A          137 LTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER--HHTLAIAAFP------LPKRIH  208 (297)
T ss_dssp             CCGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECCC------CSSSEE
T ss_pred             ccCccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC--cceEEEEcCC------CCCCce
Confidence             22468999999999999999999999999997653211  11 124567765543  2334554421      236789


Q ss_pred             EEEEEeCCHHHHH---HHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          186 HFGIAVEDVAKTV---DLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       186 hi~f~V~d~d~~~---~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |++|.|+|++++.   ++ +++|+++..+|.+.+.+..+++||+|||||.|||++..
T Consensus       209 hiaf~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          209 HFMLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EEEEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            9999999988776   88 99999998888887765677899999999999999754

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.66  E-value=4.2e-16  Score=125.19  Aligned_cols=120  Identities=18%  Similarity=0.275  Sum_probs=86.3

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc---cccCCCceeEEEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT---EYDKGNGYAQIAI  319 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~---~~~~g~g~~hiaf  319 (376)
                      .++.|+.|.|+|++++.+||+++|||++......++......++..++    ..++|.......   ....+.+..|++|
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~g~~~~~~   79 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGS----QELEIFISDQFPARPSYPEALGLRHLAF   79 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETT----EEEEEEECTTCCCCCCSSCCSSCCCEEE
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCC----eEEEEEeccCCCCCCCCCCCccceEEEE
Confidence            468999999999999999999999999875432222222222334322    256665432211   1123467889999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          320 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       320 ~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      .|+|+++++++|+++|+++..+|...+.+ .+.+|++|||||.|||+|
T Consensus        80 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           80 KVEHIEEVIAFLNEQGIETEPLRVDDFTG-KKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             ECSCHHHHHHHHHHTTCCCCCCEECTTTC-CEEEEEECTTCCEEEEEC
T ss_pred             EeCCHHHHHHHHHHcCCccccccccCCCC-cEEEEEECCCCCEEEeeC
Confidence            99999999999999999987655433443 488999999999999985

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.66  E-value=1.4e-15  Score=127.00  Aligned_cols=119  Identities=18%  Similarity=0.266  Sum_probs=87.9

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCc--------eEEEEEEecCCCCCCCC
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDS--------HFVVELTYNYGVDKYDI  180 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~--------~~~l~l~~~~~~~~~~~  180 (376)
                      +.|..+|.|+.|.|+|++++++||+++|||++....   +.  ..+++..++...        .....+....      .
T Consensus        20 ~gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~------~   88 (148)
T 2r6u_A           20 QGMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEIP---DM--DYSMVTTGPVGESGMPDEPGYINGGMMQRG------E   88 (148)
T ss_dssp             STTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEET---TT--TEEEEECSCBCTTSSBCSSSCBCEEEEESS------S
T ss_pred             cccCCceEEEEEEeCCHHHHHHHHHHccCcEEEECC---CC--CEEEEEeCCcceeecccCCcccccceeecC------C
Confidence            345568999999999999999999999999997631   22  234555544210        0112222211      1


Q ss_pred             CCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       181 ~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      ..+. |++|.|+|+++++++|+++|+++..+|.+.++ .++.+||+|||||.|||++..+
T Consensus        89 ~~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~-~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A           89 VTTP-VVTVDVESIESALERIESLGGKTVTGRTPVGN-MGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             SCSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEECC
T ss_pred             CCeE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCC-CEEEEEEECCCCCEEEEEecCC
Confidence            1344 99999999999999999999999887777663 2589999999999999998754

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.66  E-value=6.7e-16  Score=122.15  Aligned_cols=108  Identities=21%  Similarity=0.296  Sum_probs=83.3

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe-
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV-  191 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V-  191 (376)
                      ++|+|+.|.|+|++++++||+++|||++....+   .  ..+++..++   +..+.+.+....    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            479999999999999999999999999976532   1  235666543   245666654322    135788999999 


Q ss_pred             --CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          192 --EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       192 --~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                        +|+++++++|+++|+++.. |...  + ++.+|++|||||.|||+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~-p~~~--~-~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVEP-PKHA--H-AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEec-CcCC--C-cEEEEEECCCCcEEEEe
Confidence              7899999999999999754 5432  2 68999999999999986

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.66  E-value=9.8e-16  Score=124.67  Aligned_cols=119  Identities=17%  Similarity=0.188  Sum_probs=82.2

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEe-eCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLG-YGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~-~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      +...|+||.|.|+|++++++||++ |||++..... ..+.  .+++. .+    ...+.+......  .....+..|++|
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~--~~~~~~~~----~~~l~l~~~~~~--~~~~~~~~~l~f   72 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGS--EVHRAVHN----GVEFSLYSIQNP--QRSQIPSLQLGF   72 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEET----TEEEEEEECCCC--SSCCCCSEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCC--EEEEEeCC----CeEEEEEECCCC--cCCCCCceEEEE
Confidence            345899999999999999999999 9999876421 1111  23333 22    234555443221  122334568999


Q ss_pred             EeCCHHHHHHHHHHcCCe-eecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          190 AVEDVAKTVDLVKAKGGK-VTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       190 ~V~d~d~~~~rl~~~G~~-i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      .|+|+++++++++++|++ +..+|...++ +.+ ++|+|||||.|+|.+..+.
T Consensus        73 ~v~dvd~~~~~l~~~G~~~~~~~p~~~~~-G~~-~~~~DPdGn~iel~~~~~~  123 (128)
T 3g12_A           73 QITDLEKTVQELVKIPGAMCILDPTDMPD-GKK-AIVLDPDGHSIELCELEGH  123 (128)
T ss_dssp             EESCHHHHHHHHTTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC----
T ss_pred             EeCCHHHHHHHHHHCCCceeccCceeCCC-ccE-EEEECCCCCEEEEEEeccc
Confidence            999999999999999999 7777777665 445 9999999999999987654

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.66  E-value=1.4e-15  Score=126.68  Aligned_cols=120  Identities=20%  Similarity=0.334  Sum_probs=90.1

Q ss_pred             cccceeeEEEEEEeCChhHHHHHH---HHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCC---CCCCC-CC
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFY---TECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG---VDKYD-IG  181 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY---~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~---~~~~~-~~  181 (376)
                      +.+..++.|+.|.|+|++++++||   +++|||++....+  .   ...|+. +    ...+++.....   ..++. ..
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~---~~~~~~-g----~~~l~l~~~~~~~~~~~~~~~~   84 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--R---GKSYKH-G----KTYLVFVQTEDRFQTPTFHRKR   84 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--T---EEEEEE-T----TEEEEEEECCGGGSCSCCCTTS
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--C---CceEec-C----CeEEEEEEcCCCcccccccccC
Confidence            455669999999999999999999   9999999976543  1   224555 3    23566766432   11111 23


Q ss_pred             CCceEEEEEeC---CHHHHHHHHHHcCCeeec-CCeecCC-CCeEEEEEEcCCCCEEEEeec
Q 017144          182 TGFGHFGIAVE---DVAKTVDLVKAKGGKVTR-EPGPVKG-GNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       182 ~g~~hi~f~V~---d~d~~~~rl~~~G~~i~~-~p~~~~~-~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .|+.|++|.|+   |+++++++|+++|+++.. +|.+... .+.+.+||+|||||.|||+++
T Consensus        85 ~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           85 TGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            57889999999   899999999999999877 4555443 246789999999999999863

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.66  E-value=5.2e-16  Score=129.08  Aligned_cols=118  Identities=19%  Similarity=0.222  Sum_probs=86.5

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      +.++. +.|.|+|++++++||+++|||++..+...++......+++  .      +.+.......  ....+..|++|.|
T Consensus         5 i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~--~------~~l~~~~~~~--~~~~~~~hl~f~V   73 (144)
T 3r6a_A            5 ILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS--T------ILLIAGSEEA--LKPFRNTQATFLV   73 (144)
T ss_dssp             EEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET--T------EEEEESCHHH--HGGGGGCCEEEEE
T ss_pred             EEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec--c------EEEecCCccc--CCCCcceEEEEEe
Confidence            45666 9999999999999999999999876654333333333332  1      3343322111  1123457999999


Q ss_pred             CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCC
Q 017144          192 EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (376)
Q Consensus       192 ~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  242 (376)
                      +|+++++++|+++|+++..+|.+.++  ++.+||+|||||.|||++..+.+
T Consensus        74 ~d~d~~~~~l~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           74 DSLDKFKTFLEENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             SCHHHHHHHHHHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC--
T ss_pred             CCHHHHHHHHHHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCCcc
Confidence            99999999999999999888877765  37899999999999999987654

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.66  E-value=9.6e-16  Score=132.48  Aligned_cols=127  Identities=29%  Similarity=0.517  Sum_probs=95.8

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCC---------------CCceEEEEcccCCCc-
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE---------------DKNAVLELTYNHGVT-  306 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~l~l~~~~~~~-  306 (376)
                      .++.|+.|.|.|++++++||+++|||++......++..+.+++++.+..               ..+..++|....+.. 
T Consensus        30 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~~  109 (184)
T 2za0_A           30 FLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTED  109 (184)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCCC
Confidence            4689999999999999999999999999865433344466666664321               024567775432211 


Q ss_pred             ----ccc----CCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecccc
Q 017144          307 ----EYD----KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  371 (376)
Q Consensus       307 ----~~~----~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  371 (376)
                          .+.    ...+.+|++|.|+|+++++++|+++|+++..+|...++  .+++||+|||||.|||++...+
T Consensus       110 ~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          110 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             CTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTG
T ss_pred             CcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcc
Confidence                111    12578899999999999999999999999988765443  3679999999999999998765

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.66  E-value=6.5e-16  Score=127.88  Aligned_cols=127  Identities=17%  Similarity=0.219  Sum_probs=93.1

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCC--CCceEEEEcccCCCc-c-----ccCC--C
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE--DKNAVLELTYNHGVT-E-----YDKG--N  312 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~l~~~~~~~-~-----~~~g--~  312 (376)
                      .+++|+.|.|.|++++.+||+++|||++......++......++..++.  ..+..++|....... +     ...+  .
T Consensus         8 ~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~   87 (148)
T 1jc4_A            8 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   87 (148)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCC
Confidence            5689999999999999999999999999765443434455666665431  112567776543221 1     1234  6


Q ss_pred             ceeEEEEEeCCHHHHHHHHHHcCCeeec-CCccCCCCCceEEEE--ECCCCCeEEEEeccc
Q 017144          313 GYAQIAIGTDDVYKTAEAIKLSGGKITR-EPGPLPGINTKITAC--LDPDGWKSVFVDNLD  370 (376)
Q Consensus       313 g~~hiaf~V~Dl~~~~~~l~~~G~~~~~-~p~~~~~~~~~~~~~--~DPdG~~iel~~~~~  370 (376)
                      +.+|++|.|+|+++++++|+++|+++.. +|...+.+ .+++|+  +|||||.|||++..+
T Consensus        88 g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g-~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           88 GLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGG-NRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSS-CEEEEBCGGGGTTSCEEEEECCC
T ss_pred             ceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCc-eEEEEEeecCCCcEEEEEEecCC
Confidence            8899999999999999999999999883 44432332 366677  999999999999764

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.66  E-value=3.9e-16  Score=131.51  Aligned_cols=119  Identities=18%  Similarity=0.230  Sum_probs=92.7

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCC--------------CCCeEEEEeecCCCCCceEEEEcccCCCc-c
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--------------DYKYTIAVMGYGPEDKNAVLELTYNHGVT-E  307 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~--------------~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~  307 (376)
                      .+++|++|.|.|++++++||+++|||++......+              +.+..+.++..+    ...++|....... .
T Consensus        18 ~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~~~   93 (159)
T 3gm5_A           18 RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENPST   93 (159)
T ss_dssp             GGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSSCH
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCCCh
Confidence            56999999999999999999999999987544332              234566666643    4677776643321 1


Q ss_pred             c-----cCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCC--CCeEEEEec
Q 017144          308 Y-----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD--GWKSVFVDN  368 (376)
Q Consensus       308 ~-----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPd--G~~iel~~~  368 (376)
                      +     ..+.|++|++|.|+|+++++++|+++|+++..++ +..+  .+++|+.|||  |+.|||+|+
T Consensus        94 ~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~-~~~g--~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           94 WREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKG-DFEG--GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEE-EETT--EEEEEESCHHHHSSEEEEEEE
T ss_pred             hHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeecc-ccCC--eeEEEEeccccCcEEEEEEec
Confidence            1     1467899999999999999999999999997664 2333  5899999999  999999986

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.65  E-value=7.5e-16  Score=126.22  Aligned_cols=118  Identities=19%  Similarity=0.241  Sum_probs=89.8

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC--ccc-cCCCceeEEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV--TEY-DKGNGYAQIAIG  320 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~--~~~-~~g~g~~hiaf~  320 (376)
                      .+.|+.|.|+|++++.+||+++|||++......++..+...++. +    +..++|....+.  ..+ ..+.+..|++|.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            47899999999999999999999999986654333335555555 2    356666554322  111 245688999999


Q ss_pred             e---CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          321 T---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       321 V---~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |   +|+++++++|+++|+++. ++.+.+.  ++.+||+|||||.|||++..
T Consensus        80 v~~~~d~~~~~~~l~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~  128 (136)
T 2rk0_A           80 VESMTDLDVLEERLAKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGR  128 (136)
T ss_dssp             ESSHHHHHHHHHHHHHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcC
Confidence            9   899999999999999977 4444444  38899999999999999875

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.65  E-value=4.5e-16  Score=131.62  Aligned_cols=119  Identities=19%  Similarity=0.210  Sum_probs=88.9

Q ss_pred             ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC--------CCCCCC
Q 017144          110 SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--------DKYDIG  181 (376)
Q Consensus       110 ~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--------~~~~~~  181 (376)
                      ++..+|+||.|.|+|++++++||+++|||++..+.+.     ..+++..+.    ..+.+......        .+...+
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~----~~~~l~~~~~~~~~~~~~~~~~~~~   74 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR----QMLLLFDPQESSRADANNPIPRHGA   74 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT----EEEEEECHHHHTCCCTTCCSCCCEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC----EEEEEEecCCccCccccCCCCcCCC
Confidence            3457999999999999999999999999999876531     345666553    23444432111        111123


Q ss_pred             CCceEEEEEe---CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          182 TGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       182 ~g~~hi~f~V---~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .|+.|++|.|   +|+++++++|+++|+++..++. .. ++++.+||+|||||.|||+++.
T Consensus        75 ~g~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~-~~-~g~~~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           75 VGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR-WP-NGSYSVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             EEECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEE-CT-TSCEEEEEECTTCCEEEEEEGG
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHHCCCEEecccc-cc-CCcEEEEEECCCCCEEEEEeCC
Confidence            5678999999   8899999999999999875432 22 3578999999999999999865

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.65  E-value=5.1e-15  Score=121.35  Aligned_cols=120  Identities=16%  Similarity=0.136  Sum_probs=87.2

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC-C-CCCCCCCceEEEEEeCC
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV-D-KYDIGTGFGHFGIAVED  193 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~-~~~~~~g~~hi~f~V~d  193 (376)
                      ..+.|.|+|++++++||+++|||++..+...+ +....+.+..+.    ..+.+...... . ....+.+..|++|.|+|
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG----GIVMVRRTGEPYTVSCAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS----SEEEEEETTCCSSCEECCCCCCCEEEEEESC
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC----eEEEEEecCCCcCccCCCCCcEEEEEEEeCC
Confidence            46899999999999999999999998765433 322344555443    24444442111 1 11122334499999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       194 ~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      +++++++|+++|+++..+|...++ +.+.++|+|||||.|||++..+.
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  125 (137)
T 3itw_A           79 VDEHFMRSTAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLRD  125 (137)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC--
T ss_pred             HHHHHHHHHHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcCC
Confidence            999999999999999888877764 56899999999999999987543

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.64  E-value=2e-15  Score=125.65  Aligned_cols=124  Identities=17%  Similarity=0.212  Sum_probs=92.0

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecC-----------CCCCeEEEEeecCCCCCceEEEEccc--CCCc---
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN-----------PDYKYTIAVMGYGPEDKNAVLELTYN--HGVT---  306 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~l~l~~~--~~~~---  306 (376)
                      ..+.|+.|.|.|++++.+||++ |||++......           +.......++..++  ++..++|...  ....   
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--g~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD--GHSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT--SSCEEEEEEEEESCCCCBC
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCC--CCcEEEEEEecCCCCcccc
Confidence            4689999999999999999999 99999754321           12334556666432  2355666542  1111   


Q ss_pred             --cccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          307 --EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       307 --~~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                        ....+.+.+|++|.|+|+++++++|+++|+++..+|...+.+ .+.+|++||||+.|||++..+
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEECC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCc-eEEEEEECCCCCEEEEEeccC
Confidence              012345788999999999999999999999999887665543 588999999999999998753

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.64  E-value=7.8e-16  Score=128.47  Aligned_cols=121  Identities=18%  Similarity=0.197  Sum_probs=90.3

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCC--------CCCeEEEEeecCCCCCceEEEEcccCCCcc-----cc
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--------DYKYTIAVMGYGPEDKNAVLELTYNHGVTE-----YD  309 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~-----~~  309 (376)
                      ..++|+.|.|.|++++++||+++|||++......+        .+..  .++..++   +..++|....+..+     ..
T Consensus        18 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~~   92 (156)
T 3kol_A           18 RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKV--ANFITPD---GTILDLFGEPELSPPDPNPEK   92 (156)
T ss_dssp             CCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSE--EEEECTT---SCEEEEEECTTCCCSSSSTTC
T ss_pred             ceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcE--EEEEeCC---CCEEEEEecCCCCcCCCCCCC
Confidence            57999999999999999999999999997532211        1223  3334322   35566655333211     12


Q ss_pred             CCCceeEEEEEeC--CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          310 KGNGYAQIAIGTD--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       310 ~g~g~~hiaf~V~--Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      ...+..|++|.|+  |+++++++|+++|+++..+|.+.+.  ++.+||+|||||.|||++.+.
T Consensus        93 ~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           93 TFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            3468899999998  9999999999999999888776655  369999999999999998763

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.64  E-value=5.9e-16  Score=144.73  Aligned_cols=178  Identities=15%  Similarity=0.158  Sum_probs=121.1

Q ss_pred             cchhhhhccccCCccccccchHHHHHHcCccccccc----CCCccCCccccCccc-ccc----------ccc--------
Q 017144           53 RLALFQLGAAIPQSHFFGAKALKLLRAEGSTIEAST----SGNMAPTSNTVTEQN-VLD----------WVK--------  109 (376)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~p~~-~~~----------~~~--------  109 (376)
                      .-.+.|+++.+++..++.....++.+..........    ........++.||+| .++          |..        
T Consensus        59 ~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~  138 (305)
T 2wl9_A           59 SDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFG  138 (305)
T ss_dssp             CCEEEEEEEECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSS
T ss_pred             CCCeEEEEEEECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCccc
Confidence            345779999999877777666666665333221111    112234456789998 111          111        


Q ss_pred             ---ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC--CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCC
Q 017144          110 ---SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  183 (376)
Q Consensus       110 ---~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g  183 (376)
                         ....+|+||.|.|+|++++++|| ++|||++......+  ++ .....|+..+...  +.+.+...      ....+
T Consensus       139 ~~~~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~------~~~~~  209 (305)
T 2wl9_A          139 KFVTEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRH--HSLAFGVG------PMDKR  209 (305)
T ss_dssp             CBCCTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSS--CSEEECCS------CCSSS
T ss_pred             ceecCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCc--eEEEEecC------CCCCC
Confidence               22358999999999999999999 99999987542211  11 2245677665432  23444322      12367


Q ss_pred             ceEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          184 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       184 ~~hi~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      ++|++|.|+|   +++++++|+++|+++..+|.....+..+++||+|||||.|||+...
T Consensus       210 ~~hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          210 INHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             ceEEEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            8999999998   5567889999999998887777665678899999999999999754

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.64  E-value=1.1e-15  Score=125.73  Aligned_cols=120  Identities=17%  Similarity=0.133  Sum_probs=88.8

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCC------CCCCCCCCCc
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG------VDKYDIGTGF  184 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~------~~~~~~~~g~  184 (376)
                      |.+++.|+.|.|+|++++++||++ |||++..+.+  ...  .+.+..++   ...+.+.....      ......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~--~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAP--HTEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCS--EEEEECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCc--eEEEEcCC---CeEEEEecCccchhhCcccCCCCCCCe
Confidence            346899999999999999999998 9999865432  111  23343322   23455654211      1111234678


Q ss_pred             eEEEEEeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          185 GHFGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       185 ~hi~f~V~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .|++|.|+   |+++++++|+++|+++..+|.+.++ +.+.+||+|||||.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            89999999   8999999999999999887777764 478999999999999999876

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.63  E-value=2.1e-15  Score=122.34  Aligned_cols=119  Identities=20%  Similarity=0.240  Sum_probs=88.5

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC---ccccCCCceeEEE
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV---TEYDKGNGYAQIA  318 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~---~~~~~g~g~~hia  318 (376)
                      ...+.|+.|.|+|++++.+||+++|||++....    ...  .++..+    +..+.+......   .....+.+..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~--~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG----AGR--IALEFG----HQKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET----TTE--EEEEET----TEEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEec----CCe--EEEEcC----CEEEEEEcCCCCccccCCCCCCCccEEE
Confidence            356899999999999999999999999997652    122  223332    244555442211   1123456889999


Q ss_pred             EEeCC-HHHHHHHHHHcCCeeecCCccCCCCC--ceEEEEECCCCCeEEEEeccc
Q 017144          319 IGTDD-VYKTAEAIKLSGGKITREPGPLPGIN--TKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       319 f~V~D-l~~~~~~l~~~G~~~~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~  370 (376)
                      |.|+| +++++++|+++|+++..+|...+++.  .+.+|++|||||.|||++..+
T Consensus        78 ~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 99999999999999988775554322  378999999999999999764

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.63  E-value=2.1e-15  Score=121.32  Aligned_cols=110  Identities=13%  Similarity=0.012  Sum_probs=84.1

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      ..-.|+.|.|+|++++++||+++|||++....    .  ..+++..+.    ..+.+......+    ..+..|++|.|+
T Consensus         4 ~~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~~----~~l~l~~~~~~~----~~~~~~~~~~v~   69 (122)
T 1qto_A            4 FLGAVPVLTAVDVPANVSFWVDTLGFEKDFGD----R--DFAGVRRGD----IRLHISRTEHQI----VADNTSAWIEVT   69 (122)
T ss_dssp             CCCCCCEEEESSHHHHHHHHHHTTCCEEEEEC----S--SEEEEEETT----EEEEEEECSCHH----HHTTCEEEEEES
T ss_pred             ccceeEEEEcCCHHHHHHHHHhccCcEEeeCC----C--CEEEEEECC----EEEEEEcCCCCC----CCCceEEEEEEC
Confidence            34568999999999999999999999997652    1  234555542    345565432211    123369999999


Q ss_pred             CHHHHHHHHHHc------CC--eeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          193 DVAKTVDLVKAK------GG--KVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       193 d~d~~~~rl~~~------G~--~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      |+++++++++++      |+  ++..+|...++ + +.++++|||||.|||.++
T Consensus        70 dvd~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           70 DPDALHEEWARAVSTDYADTSGPAMTPVGESPA-G-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             CHHHHHHHHTTTSCSCTTCTTSCEECCCEEETT-E-EEEEEECTTSCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccCccccccCCCcCCCC-C-cEEEEECCCCCEEEEecC
Confidence            999999999999      99  88888877765 3 889999999999999975

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.62  E-value=8.1e-15  Score=119.96  Aligned_cols=118  Identities=12%  Similarity=0.104  Sum_probs=84.4

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d  193 (376)
                      .-.+..|.|+|++++++||+++|||++..+.+      ..+++..+.    ..+.+.........+.+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~----~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSG----CGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT----EEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECC----EEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            55677899999999999999999999986643      245666553    35666654332221222344699999999


Q ss_pred             HHHHHHHHHHcC----CeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCC
Q 017144          194 VAKTVDLVKAKG----GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTP  242 (376)
Q Consensus       194 ~d~~~~rl~~~G----~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  242 (376)
                      +++++++|+++|    +++..+|...++ +.+.++|+|||||.|||.+.....
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECCTT
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEccccc
Confidence            999999999655    455656666654 568999999999999999877554

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.62  E-value=9.1e-16  Score=143.28  Aligned_cols=176  Identities=16%  Similarity=0.148  Sum_probs=118.2

Q ss_pred             hhhhhccccCCccccccchHHHHHHcCccccccc----CCCccCCccccCccc-cccccc--------------------
Q 017144           55 ALFQLGAAIPQSHFFGAKALKLLRAEGSTIEAST----SGNMAPTSNTVTEQN-VLDWVK--------------------  109 (376)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~p~~-~~~~~~--------------------  109 (376)
                      .+.|+++.+++..++.....++.+..........    .+......++.||+| .++...                    
T Consensus        64 ~~~~~~~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~  143 (302)
T 2ehz_A           64 DLEYLGWRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKF  143 (302)
T ss_dssp             EEEEEEEEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCB
T ss_pred             CeeEEEEEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccce
Confidence            4678899998777776666666655332222111    111234456789998 122110                    


Q ss_pred             -ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC--CC-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCce
Q 017144          110 -SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--ED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  185 (376)
Q Consensus       110 -~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~  185 (376)
                       ...++|+||.|.|+|++++++|| ++|||++......+  ++ .....|+..+..  ++.+.+....      ...+++
T Consensus       144 ~~~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~  214 (302)
T 2ehz_A          144 VTGDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGAMP------AAKRLN  214 (302)
T ss_dssp             CCGGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECSCC------CSSSEE
T ss_pred             ecCCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEecCC------CCCcee
Confidence             11248999999999999999999 99999986543211  22 234567766543  2234443221      135789


Q ss_pred             EEEEEeCCHHH---HHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          186 HFGIAVEDVAK---TVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       186 hi~f~V~d~d~---~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      |++|.|+|+++   ++++|+++|+++..+|...+.+..+++||+|||||.|||+...
T Consensus       215 hiaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          215 HLMLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            99999998765   5679999999998888777666678899999999999999653

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.62  E-value=2.9e-15  Score=121.85  Aligned_cols=116  Identities=16%  Similarity=0.222  Sum_probs=81.4

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      .+.|+.|.|.|++++++||++ |||++...... .+.+...... +    +..+.+.....  ......+.+|++|.|+|
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~~~~~~~~-~----~~~l~l~~~~~--~~~~~~~~~~l~f~v~d   76 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGSEVHRAVH-N----GVEFSLYSIQN--PQRSQIPSLQLGFQITD   76 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE-T----TEEEEEEECCC--CSSCCCCSEEEEEEESC
T ss_pred             eEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCCEEEEEeC-C----CeEEEEEECCC--CcCCCCCceEEEEEeCC
Confidence            578999999999999999999 99998654211 1123222211 1    34455533211  11233456899999999


Q ss_pred             HHHHHHHHHHcCCe-eecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          324 VYKTAEAIKLSGGK-ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       324 l~~~~~~l~~~G~~-~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +++++++++++|++ ++.+|...+.| .+ ++|+|||||.|||.+.++
T Consensus        77 vd~~~~~l~~~G~~~~~~~p~~~~~G-~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           77 LEKTVQELVKIPGAMCILDPTDMPDG-KK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             HHHHHHHHTTSTTCEEEEEEEECC-C-EE-EEEECTTCCEEEEEC---
T ss_pred             HHHHHHHHHHCCCceeccCceeCCCc-cE-EEEECCCCCEEEEEEecc
Confidence            99999999999999 88777777664 34 999999999999998764

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.61  E-value=7.7e-15  Score=120.30  Aligned_cols=119  Identities=19%  Similarity=0.188  Sum_probs=87.7

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc--cccCCCceeEEEEEeC
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--EYDKGNGYAQIAIGTD  322 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~--~~~~g~g~~hiaf~V~  322 (376)
                      ..++.|.|.|++++++||+++|||++......+ +......+..+    +..+.+.......  ....+.+.+|++|.|+
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~   77 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWVS   77 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEES
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEeC
Confidence            457889999999999999999999998665443 33333444432    2445554322111  1112234449999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |+++++++|+++|+++..+|...+.+ .+.++++|||||.|||++..
T Consensus        78 dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  123 (137)
T 3itw_A           78 DVDEHFMRSTAAGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHL  123 (137)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEEETTT-EEEEEEECSSSCEEEEEECC
T ss_pred             CHHHHHHHHHHcCCeeccCccccCCC-cEEEEEECCCCCEEEEEEEc
Confidence            99999999999999999888777754 48999999999999999976

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.61  E-value=1.6e-14  Score=116.72  Aligned_cols=113  Identities=20%  Similarity=0.254  Sum_probs=85.2

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d  193 (376)
                      ...|+.|.|+|++++++||++ |||++..+.    .  ..+++..+.    ..+.+....+..   ...+..|++|.|+|
T Consensus         3 ~~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~----~--~~~~~~~~~----~~l~l~~~~~~~---~~~~~~~~~~~v~d   68 (126)
T 1ecs_A            3 DQATPNLPSRDFDSTAAFYER-LGFGIVFRD----A--GWMILQRGD----LMLEFFAHPGLD---PLASWFSCCLRLDD   68 (126)
T ss_dssp             CEEEEEEEESCHHHHHHHHHT-TTCEEEEEC----S--SEEEEEETT----EEEEEEECTTCC---GGGCCCEEEEEESC
T ss_pred             ccEEEEEEeCCHHHHHHHHHH-CCCEEEecC----C--CEEEEEeCC----EEEEEEeCCCCC---CCCcceEEEEEECC
Confidence            357899999999999999998 999997652    1  234555542    345665533211   12467899999999


Q ss_pred             HHHHHHHHHHcCCee-------ecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          194 VAKTVDLVKAKGGKV-------TREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       194 ~d~~~~rl~~~G~~i-------~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      +++++++++++|+++       ..+|.+.++ +.+.++++|||||.|||++....
T Consensus        69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           69 LAEFYRQCKSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             HHHHHHHHHHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC-
T ss_pred             HHHHHHHHHHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchhh
Confidence            999999999999984       566666654 45789999999999999987653

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.60  E-value=8.2e-15  Score=139.06  Aligned_cols=174  Identities=18%  Similarity=0.151  Sum_probs=113.8

Q ss_pred             hhhhhccccCCccccccchHHHHHHcCcccccccCCCccCCccccCccc-ccccc--------------------cccce
Q 017144           55 ALFQLGAAIPQSHFFGAKALKLLRAEGSTIEASTSGNMAPTSNTVTEQN-VLDWV--------------------KSDKR  113 (376)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~~--------------------~~~~~  113 (376)
                      .+.|+++.|++..++-....++.+. |..........-....++.||+| .++..                    .+...
T Consensus       101 ~~~hiaf~v~~~~dld~~~~~l~~~-G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~  179 (338)
T 1zsw_A          101 AITRIGLLVPSEDSLHYWKERFEKF-DVKHSEMTTYANRPALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQ  179 (338)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHHT-TCEECCSEEETTEEEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCC
T ss_pred             CeeeEEEEcCCHHHHHHHHHHHHHC-CCccccccccCCcEEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCc
Confidence            4678999999877766555566554 43332221111114556779999 11111                    12356


Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCC-CCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGP-EDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~-~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      +|+||.|.|+|++++++||+++|||++....+    . . +.+..+. ......+.+... .........++.|++|.|+
T Consensus       180 ~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~-~-~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~hiaf~v~  252 (338)
T 1zsw_A          180 GMGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q-E-AIFQSIKGEAFGEIVVKYLD-GPTEKPGRGSIHHLAIRVK  252 (338)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S-E-EEEESSTTCSTTCEEEEECC-SSBCBCCBTCEEEEEEEES
T ss_pred             eEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----C-e-EEEEecCCCCceEEEEeccC-CCCCCCCCCceEEEEEEeC
Confidence            89999999999999999999999999976543    1 2 3333321 110112223221 1111112246889999999


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          193 ---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       193 ---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                         |+++++++|+++|+++. +|.+.  ++.+.+||+|||||.|||++..
T Consensus       253 ~~~dv~~~~~~l~~~G~~~~-~~~~~--~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          253 NDAELAYWEEQVKQRGFHSS-GIIDR--FYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             SHHHHHHHHHHHHHTTCCCC-CCEEC--SSEEEEEEECTTCCEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCcee-eeeec--CceEEEEEECCCCCEEEEEEcC
Confidence               68899999999999985 55554  3578899999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.60  E-value=6.7e-15  Score=119.99  Aligned_cols=114  Identities=16%  Similarity=0.103  Sum_probs=87.2

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .++.|+.|.|.|++++.+||+++|||++....+    .+..  +..++   +..+.+....... ....++..|++|.|+
T Consensus        12 ~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~--~~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~~v~   81 (132)
T 3sk2_A           12 ITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVA--FPSSG---DALFAIWSGGEEP-VAEIPRFSEIGIMLP   81 (132)
T ss_dssp             CCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEE--EECST---TCEEEEESSSCCC-CTTSCCCEEEEEEES
T ss_pred             ceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEE--EEcCC---CcEEEEEeCCCCC-cCCCCCcceEEEEeC
Confidence            579999999999999999999999999865432    2332  22111   3455655433211 123457789999998


Q ss_pred             C---HHHHHHHHHH---cCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          323 D---VYKTAEAIKL---SGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       323 D---l~~~~~~l~~---~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      |   ++++++++++   +|+++..+|...+.+  +.+||+|||||.|||.+.
T Consensus        82 ~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           82 TGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             SHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            6   9999999999   999999888777664  889999999999999875

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.60  E-value=5.2e-15  Score=123.54  Aligned_cols=117  Identities=18%  Similarity=0.263  Sum_probs=86.8

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC---ccccCCCceeEEEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV---TEYDKGNGYAQIAI  319 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~---~~~~~g~g~~hiaf  319 (376)
                      .++.|+.|.|.|++++++||+++|||++....   + ...  ++..+    ...+.|......   .......+..|++|
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~~--~l~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~f   91 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NRK--ALIFG----AQKINLHQQEMEFEPKASRPTPGSADLCF   91 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TEE--EEEET----TEEEEEEETTBCCSSCCSSCCTTCCEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-CeE--EEEeC----CeEEEEeccCCcCCCcCcCCCCCccEEEE
Confidence            46899999999999999999999999997652   1 232  23332    244555432211   11223567899999


Q ss_pred             EeC-CHHHHHHHHHHcCCeeecCCccCCCCC--ceEEEEECCCCCeEEEEecc
Q 017144          320 GTD-DVYKTAEAIKLSGGKITREPGPLPGIN--TKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       320 ~V~-Dl~~~~~~l~~~G~~~~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~  369 (376)
                      .++ |+++++++|+++|+++..+|...+++.  .+.+||+|||||.|||++..
T Consensus        92 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  144 (152)
T 3huh_A           92 ITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYV  144 (152)
T ss_dssp             EESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC-
T ss_pred             EecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecc
Confidence            987 999999999999999988776554332  38899999999999999876

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.60  E-value=9.5e-15  Score=120.41  Aligned_cols=117  Identities=16%  Similarity=0.123  Sum_probs=84.4

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEec-----CCC--CCCCCCCCceE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN-----YGV--DKYDIGTGFGH  186 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~-----~~~--~~~~~~~g~~h  186 (376)
                      ++.|+.|.|+|++++++||+++|||++..+...  ..  ..++..+.    ..+.+...     ...  .+...+.+ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~--~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PI--FRGLDTGK----SCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TT--EEEEECSS----SEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC--Cc--eEEeecCC----EEEEEcCccccccccccccCCCCCCe-EE
Confidence            899999999999999999999999998643211  11  23344332    23444321     010  11112345 49


Q ss_pred             EEEEeC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          187 FGIAVE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       187 i~f~V~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      ++|.|+   |+++++++|+++|+++..+|.+.++ +.+.+||+|||||.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEccc
Confidence            999999   5999999999999998887776654 5789999999999999998654

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.60  E-value=6.6e-15  Score=117.36  Aligned_cols=113  Identities=20%  Similarity=0.155  Sum_probs=82.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      ++.|+.|.|+|++++.+||+++|||++....+    .+  ..+..++    ..+.+...........+.+ .|++|.|+|
T Consensus         5 ~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~--~~~~~~~----~~l~l~~~~~~~~~~~~~~-~~~~~~v~d   73 (118)
T 2i7r_A            5 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----GF--AQFTIGS----HCLMLSQNHLVPLENFQSG-IIIHIEVED   73 (118)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TE--EEEEETT----EEEEEESSCSSSCCCCCSC-EEEEEECSC
T ss_pred             eeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----CE--EEEEeCC----eEEEEEcCCCCCcccCCCe-EEEEEEECC
Confidence            57899999999999999999999999864321    23  2333322    2333322111111122334 589999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +++++++|+++|+++..+|.+.+.+ .+.++++|||||.|||++.
T Consensus        74 ~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           74 VDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHHHCCCceecCCccccCc-cEEEEEECCCccEEEEEec
Confidence            9999999999999998888777654 4789999999999999874

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.60  E-value=7.7e-15  Score=121.29  Aligned_cols=112  Identities=14%  Similarity=0.247  Sum_probs=85.5

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      ..+.|+.|.|.|++++.+||+++|||++.....  +..+....++  .  .+..+.+...      ....+..|++|.|+
T Consensus        27 ~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~--~--~~~~l~l~~~------~~~~~~~h~~~~v~   94 (141)
T 3ghj_A           27 KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWNFLWVS--G--RAGMVVLQEE------KENWQQQHFSFRVE   94 (141)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEEEEEET--T--TTEEEEEEEC------CSSCCCCEEEEEEC
T ss_pred             ceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEEEEEec--C--CCcEEEEecc------CCCCCCceEEEEEe
Confidence            569999999999999999999999999986642  2223333333  2  2466666653      12346689999997


Q ss_pred             --CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          323 --DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       323 --Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                        |+++++++|+++|+++. +|...+.+..+.+||+|||||.|||++
T Consensus        95 ~~dld~~~~~l~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           95 KSEIEPLKKALESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             GGGHHHHHHHHHHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence              99999999999999988 444444434689999999999999986

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.60  E-value=1.3e-14  Score=117.95  Aligned_cols=115  Identities=18%  Similarity=0.219  Sum_probs=84.4

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeE---EEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYT---IAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  320 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~  320 (376)
                      .+.|+.|.|+|++++.+||+++|||++....+  +..+.   ..++..+    +..+.+......    .+.+.+|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----~~~~~~h~~~~   73 (133)
T 2p7o_A            4 GLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----QERTYNHIAFQ   73 (133)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----CCCCSCEEEEE
T ss_pred             eEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----CCCCeeEEEEE
Confidence            57899999999999999999999999875432  11111   0023322    345666542211    24678899999


Q ss_pred             e--CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          321 T--DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       321 V--~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |  +|+++++++++++|+++..+|.+.+++ .+.+|++|||||.|||++..
T Consensus        74 v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           74 IQSEEVDEYTERIKALGVEMKPERPRVQGE-GRSIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             CCGGGHHHHHHHHHHHTCCEECCCCCCTTC-CCEEEEECSSSCEEEEECSS
T ss_pred             cCHHHHHHHHHHHHHCCCcccCCCccCCCC-eeEEEEECCCCCEEEEEcCC
Confidence            9  599999999999999999887655433 47899999999999999876

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.59  E-value=2.8e-15  Score=123.42  Aligned_cols=117  Identities=17%  Similarity=0.174  Sum_probs=84.6

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEE-----Eec---CCCCCCCCCC
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL-----TYN---YGVDKYDIGT  182 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l-----~~~---~~~~~~~~~~  182 (376)
                      +.+++.|+.|.|+|++++++||+++|||++..+.+    .  .+.+..+     ..+..     ...   ........+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~~~~g-----~~l~~~~~~~~~~~~~~~~~~~~~~~   73 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----S--FVLFETG-----FAIHEGRSLEETIWRTSSDAQEAYGR   73 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----S--EEEETTS-----CEEEEHHHHHHHHHSCCC--CCCSCC
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----C--cEEEecc-----ceeccCchhhhhccccCCccccccCC
Confidence            35689999999999999999999999999876432    1  2233311     22321     010   1111122345


Q ss_pred             CceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          183 GFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       183 g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      +..|++|.|+|+++++++|++ |+++..+|.+.++ +.+.+|++|||||.|||++..+
T Consensus        74 ~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           74 RNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC-
T ss_pred             CceEEEEEeCcHHHHHHHHHc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecch
Confidence            788999999999999999999 9998877777764 4688999999999999998764

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.59  E-value=3.7e-14  Score=118.04  Aligned_cols=121  Identities=20%  Similarity=0.194  Sum_probs=81.1

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEec------CCC-CCCCCCCC
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN------YGV-DKYDIGTG  183 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~------~~~-~~~~~~~g  183 (376)
                      ...+|.||.|.|+|++++++||++ ||+.......  +..  ..++.....   ..+.+...      ... .....+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~--~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFT--DES--CACMVVSEQ---AFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGC--BTT--EEEEEEETT---EEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeec--CCc--eeEEeecCc---ceEeeeccccccccccccCCCCCCCC
Confidence            345899999999999999999998 5665543322  111  222222221   12222221      011 11112345


Q ss_pred             ceEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          184 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       184 ~~hi~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      ..|++|.|++   +++++++++++|+.+..+|.+.+  .++.+||+|||||.|||+...+.
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~--~~~~~~f~DPDGn~iEi~~~~p~  136 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYG--FMYGRSFHDLDGHLWEVMWMSAE  136 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECS--SEEEEEEECTTCCEEEEEEECTT
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccC--CEEEEEEEcCCCCEEEEEEEChh
Confidence            5699999974   77889999999999999888765  46899999999999999975543

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.59  E-value=8e-15  Score=121.72  Aligned_cols=116  Identities=19%  Similarity=0.233  Sum_probs=87.9

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccc-cCCCceeEEEEEe
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY-DKGNGYAQIAIGT  321 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~-~~g~g~~hiaf~V  321 (376)
                      ..+.|+.|.|.|++++.+||+++|||++....  +  .+..  +..++   +..+.|.......+. ..+.+..|++|.|
T Consensus        24 ~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~--~--~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~v   94 (144)
T 2kjz_A           24 THPDFTILYVDNPPASTQFYKALLGVDPVESS--P--TFSL--FVLAN---GMKLGLWSRHTVEPKASVTGGGGELAFRV   94 (144)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE--T--TEEE--EECTT---SCEEEEEETTSCSSCCCCSSSSCEEEEEC
T ss_pred             CceeEEEEEeCCHHHHHHHHHHccCCEeccCC--C--CeEE--EEcCC---CcEEEEEeCCCCCCccCCCCCceEEEEEe
Confidence            37899999999999999999999999987543  1  2333  33222   345666443222121 2346788999999


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 D---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 ~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +   |+++++++|+++|+++..+|...+.  ++.+||+|||||.|||+++.
T Consensus        95 ~d~~dv~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           95 ENDAQVDETFAGWKASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            7   5899999999999999888876665  38899999999999999864

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.59  E-value=3.8e-15  Score=123.83  Aligned_cols=111  Identities=21%  Similarity=0.249  Sum_probs=84.8

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHH
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  327 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~  327 (376)
                      +.|.|.|++++++||+++|||++......++..+.+..++      .  +.+.....  ......+..|++|.|+|++++
T Consensus        10 i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~~--~~~~~~~~~hl~f~V~d~d~~   79 (144)
T 3r6a_A           10 SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGSE--EALKPFRNTQATFLVDSLDKF   79 (144)
T ss_dssp             EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESCH--HHHGGGGGCCEEEEESCHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCCc--ccCCCCcceEEEEEeCCHHHH
Confidence            7899999999999999999999876654444445554433      1  33332211  111223568999999999999


Q ss_pred             HHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          328 AEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       328 ~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +++|+++|+++..+|.+.+.|  +.+||+|||||.|||++..+
T Consensus        80 ~~~l~~~G~~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~  120 (144)
T 3r6a_A           80 KTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSK  120 (144)
T ss_dssp             HHHHHHTTCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHcCCEEecCCccCCCc--eEEEEECCCCCEEEEEEcCC
Confidence            999999999999888777764  78999999999999999874

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.59  E-value=6.4e-15  Score=118.89  Aligned_cols=114  Identities=18%  Similarity=0.179  Sum_probs=84.6

Q ss_pred             CCcccccccc--CChhHHHHHHHHhhCCEEeceecCC-CCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEE
Q 017144          243 EPLCQVMLRV--GDLDRAINFYKKAFGMELLRKRDNP-DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  319 (376)
Q Consensus       243 ~~~~~v~L~v--~D~~~a~~FY~~~lG~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf  319 (376)
                      .++.|+.|.|  .|++++.+||+++|||++....... ....  .++..+    +..+.|....+    ....+.+|++|
T Consensus         9 ~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~--~~~~~~----~~~l~l~~~~~----~~~~~~~~~~f   78 (126)
T 2qqz_A            9 QGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGG--CWFKCG----NQEIHIGVEQN----FNPAKRAHPAF   78 (126)
T ss_dssp             EEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCC--EEEEET----TEEEEEEECTT----CCCCSSSCEEE
T ss_pred             ceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCc--eEEEeC----CEEEEEEecCC----CCCCCceEEEE
Confidence            3589999999  8999999999999999997543211 0111  223332    24555554321    12357789999


Q ss_pred             EeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          320 GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       320 ~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      .|+|+++++++|+++|+++..++. .++  .+.+|++|||||.|||+++.
T Consensus        79 ~v~d~~~~~~~l~~~G~~~~~~~~-~~g--~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           79 YVLKIDEFKQELIKQGIEVIDDHA-RPD--VIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EETTHHHHHHHHHHTTCCCEEECS-STT--EEEEEEECTTSCEEEEEEEC
T ss_pred             EcCCHHHHHHHHHHcCCCccCCCC-CCC--eeEEEEECCCCCEEEEEeCC
Confidence            999999999999999999987763 333  58899999999999999864

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.58  E-value=7.2e-15  Score=120.83  Aligned_cols=121  Identities=18%  Similarity=0.278  Sum_probs=85.9

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      ...++.|.|.|++++++||+++|||++...... ...+...+++.+.  ....+++....+......+.+..|++|.|+|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d   87 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVFYVPN   87 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEEECCC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCC--CceEEEEeecCCCCCCCCCCCccEEEEEeCC
Confidence            356788889999999999999999998755432 2335666676533  2345666554333233445677899999999


Q ss_pred             H---HHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          324 V---YKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       324 l---~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +   ++++++|+++|+++..++.+.....+  .||+|||||.|||+++.
T Consensus        88 ~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           88 AVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             HHHHHHHHHHHHHTTCCEECCSSHHHHSSE--EEEECTTCCEEEEESSC
T ss_pred             cchHHHHHHHHHHcCCcCcCCCCcccCCCC--eEEECCCCCEEEEEEcC
Confidence            9   99999999999998833221111112  27999999999999864

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.57  E-value=1.1e-14  Score=121.54  Aligned_cols=119  Identities=19%  Similarity=0.242  Sum_probs=90.2

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc-----cccCCCceeEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-----EYDKGNGYAQI  317 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-----~~~~g~g~~hi  317 (376)
                      ..+.|+.|.|.|++++.+||+++|||++....    ..+  .++..+    +..+.|....+..     +...+.+..|+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~l   73 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PEI--IFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMAL   73 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SSE--EEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CCE--EEEEcC----CEEEEEEeccccccccCCCCCCCCCeEEE
Confidence            36899999999999999999999999987543    223  333332    3456665422110     11124577899


Q ss_pred             EEEe---CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccccc
Q 017144          318 AIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  372 (376)
Q Consensus       318 af~V---~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  372 (376)
                      +|.|   +|+++++++|+++|+++..+|...+.+ .+.+|++|||||.|||++.+.|.
T Consensus        74 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~~  130 (150)
T 3bqx_A           74 AHNVRAETEVAPLMERLVAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPVWP  130 (150)
T ss_dssp             EEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTTSC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCCce
Confidence            9999   899999999999999999888776654 48999999999999999988664

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.57  E-value=1.4e-14  Score=119.11  Aligned_cols=116  Identities=16%  Similarity=0.193  Sum_probs=83.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCC--eEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK--YTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      .+.|+.|.|+|++++.+||+++|||++..........  ... ++..+    +..+.+......    ...+..|++|.|
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~g----~~~l~l~~~~~~----~~~~~~h~~~~v   74 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREK-FFLIG----DIWVAIMQGEKL----AERSYNHIAFKI   74 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEE-EEEET----TEEEEEEECCCC----SSCCSCEEEEEC
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCCccccccceE-EEEEC----CEEEEEEeCCCC----CCCCeeEEEEEc
Confidence            4789999999999999999999999987543221100  000 23322    345666543211    145778999999


Q ss_pred             C--CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 D--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 ~--Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +  |+++++++++++|+++..+|...+++ .+.+|++|||||.|||++..
T Consensus        75 ~~~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           75 DDADFDRYAERVGKLGLDMRPPRPRVEGE-GRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             CGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             CHHHHHHHHHHHHHCCCcccCCcccCCCC-eEEEEEECCCCCEEEEEeCC
Confidence            8  99999999999999998776655533 58899999999999999865

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.57  E-value=2.3e-14  Score=115.57  Aligned_cols=109  Identities=15%  Similarity=0.061  Sum_probs=83.3

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCH
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDV  324 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl  324 (376)
                      ..|+.|.|+|++++.+||+++|||++...  .  ..+  ..+..+    +..+.+....+.    ...+.+|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~--~--~~~--~~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFV--E--DDF--AGVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEE--C--SSE--EEEEET----TEEEEEEECSCT----TTGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEec--C--CCE--EEEEEC----CEEEEEEcCCCC----CCCCceEEEEEECCH
Confidence            35789999999999999999999999754  1  223  233322    345555443221    123447999999999


Q ss_pred             HHHHHHHHHc------CC--eeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          325 YKTAEAIKLS------GG--KITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       325 ~~~~~~l~~~------G~--~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ++++++++++      |+  ++..+|...+.+  +.+|++|||||.|||.+..
T Consensus        72 ~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            9999999999      99  888888777764  8999999999999999864

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.56  E-value=1.2e-14  Score=115.80  Aligned_cols=111  Identities=15%  Similarity=0.110  Sum_probs=83.0

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      .+ |+.|.|+|++++.+||+++|||++...   + +.+.  .+..+. .....+.+....     ....+.+|++|.|+|
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~---~-~~~~--~~~~~~-~~~~~l~l~~~~-----~~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMD---H-GWIV--THASPL-EAHAQVSFAREG-----GSGTDVPDLSIEVDN   74 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEE---C-SSEE--EEEEEE-EEEEEEEEESSS-----BTTBCCCSEEEEESC
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEec---C-CEEE--EEecCC-CCcEEEEEEcCC-----CCCCceeEEEEEECC
Confidence            46 899999999999999999999998753   1 2221  222211 112344444321     123466899999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +++++++++++|+++..+|.+.+.+ .+.+|++|||||.|||+++
T Consensus        75 ~~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHCCCccccCCccCCCc-cEEEEEECCCCCEEEEEec
Confidence            9999999999999998887776654 4899999999999999985

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.56  E-value=9.2e-15  Score=123.50  Aligned_cols=121  Identities=17%  Similarity=0.179  Sum_probs=87.9

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC--------ccccCCCc
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV--------TEYDKGNG  313 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~--------~~~~~g~g  313 (376)
                      ..++.|+.|.|.|++++++||+++|||++......   ..  .++..+    ...+.+......        .+...+.+
T Consensus         6 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~~--~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~~g   76 (160)
T 3r4q_A            6 PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG---QL--VFFKCG----RQMLLLFDPQESSRADANNPIPRHGAVG   76 (160)
T ss_dssp             CSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT---TE--EEEEET----TEEEEEECHHHHTCCCTTCCSCCCEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC---cE--EEEeCC----CEEEEEEecCCccCccccCCCCcCCCcc
Confidence            35789999999999999999999999999765432   12  233322    234444321111        01122357


Q ss_pred             eeEEEEEe---CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecccccc
Q 017144          314 YAQIAIGT---DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLK  373 (376)
Q Consensus       314 ~~hiaf~V---~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  373 (376)
                      ..|++|.|   +|+++++++|+++|+++..++. .+.+ .+.+|++|||||.|||++++.|..
T Consensus        77 ~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~-~~~g-~~~~~~~DPdG~~iel~~~~~~~~  137 (160)
T 3r4q_A           77 QGHFCFYADDKAEVDEWKTRFEALEIPVEHYHR-WPNG-SYSVYIRDPAGNSVEVGEGKLWGF  137 (160)
T ss_dssp             ECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEE-CTTS-CEEEEEECTTCCEEEEEEGGGGTC
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHHCCCEEecccc-ccCC-cEEEEEECCCCCEEEEEeCCCCCc
Confidence            79999999   8999999999999999885543 2233 589999999999999999987653

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.56  E-value=1.9e-14  Score=120.10  Aligned_cols=117  Identities=12%  Similarity=0.101  Sum_probs=85.0

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCcc-ccCCCceeEEEEEe
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE-YDKGNGYAQIAIGT  321 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~-~~~g~g~~hiaf~V  321 (376)
                      .++.|+.|.|.|++++++||+++|||++....+    .+.  ++..++   +..+.+........ .....+..|++|.|
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~--~~~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f~v   75 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP----TFA--MFVMKT---GLRLGLWAQEEIEPKAHQTGGGMELSFQV   75 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEECS----SEE--EEECTT---SCEEEEEEGGGCSSCCC----CEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC----CEE--EEEcCC---CcEEEEecCCcCCccccCCCCeEEEEEEc
Confidence            358999999999999999999999999875431    233  333211   34555543221111 12235678999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          322 DD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       322 ~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +|   +++++++|+++|+++..+|...+.|  +.+||+|||||.|||++...
T Consensus        76 ~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~  125 (148)
T 3rhe_A           76 NSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKR  125 (148)
T ss_dssp             SCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC-
T ss_pred             CCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcCh
Confidence            87   9999999999999999888777763  88999999999999998873

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.55  E-value=8.5e-14  Score=115.29  Aligned_cols=117  Identities=16%  Similarity=0.198  Sum_probs=81.5

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecC---C-----CCCCCCCCCceEE
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY---G-----VDKYDIGTGFGHF  187 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~---~-----~~~~~~~~g~~hi  187 (376)
                      ..+.|.|+|++++++||+++|||++......+    ..+++..+.    ..+.+....   .     ....+.+.|+. +
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~----~~~~l~~g~----~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE----EFVYLTLDG----VDVMLEGIAGKSRKWLSGDLEFPLGSGVN-F   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG----TEEEEEETT----EEEEEEEC-----------CCSSTTTTEE-E
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC----CEEEEEcCC----eEEEEEeccCCCcccccCccccCCCCceE-E
Confidence            46889999999999999999999997533211    234565542    234444421   1     01112334665 9


Q ss_pred             EEEeCCHHHHHHHHHH-cCCeeecCCeec------CCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          188 GIAVEDVAKTVDLVKA-KGGKVTREPGPV------KGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       188 ~f~V~d~d~~~~rl~~-~G~~i~~~p~~~------~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      +|.|+|+++++++|++ +|+++..+|...      ..++++.++|+|||||.|||++....
T Consensus        78 ~~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           78 QWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC---
T ss_pred             EEEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCCC
Confidence            9999999999999999 999988776642      12356889999999999999986543

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.55  E-value=7.7e-14  Score=115.98  Aligned_cols=119  Identities=21%  Similarity=0.293  Sum_probs=88.2

Q ss_pred             CCCCCccccccccCChhHHHHHH---HHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCC---Ccccc-CCC
Q 017144          240 PTPEPLCQVMLRVGDLDRAINFY---KKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG---VTEYD-KGN  312 (376)
Q Consensus       240 ~~~~~~~~v~L~v~D~~~a~~FY---~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~---~~~~~-~g~  312 (376)
                      +....+.|+.|.|.|++++++||   +++|||++....+.    .. .++. +    ...+.|....+   ..+.. ...
T Consensus        16 ~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~----~~-~~~~-g----~~~l~l~~~~~~~~~~~~~~~~~   85 (146)
T 3ct8_A           16 YFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR----GK-SYKH-G----KTYLVFVQTEDRFQTPTFHRKRT   85 (146)
T ss_dssp             TTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT----EE-EEEE-T----TEEEEEEECCGGGSCSCCCTTSS
T ss_pred             ccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC----Cc-eEec-C----CeEEEEEEcCCCcccccccccCC
Confidence            44568999999999999999999   99999999765421    11 2333 2    34566654332   11122 235


Q ss_pred             ceeEEEEEeC---CHHHHHHHHHHcCCeeec-CCccCCCC-CceEEEEECCCCCeEEEEec
Q 017144          313 GYAQIAIGTD---DVYKTAEAIKLSGGKITR-EPGPLPGI-NTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       313 g~~hiaf~V~---Dl~~~~~~l~~~G~~~~~-~p~~~~~~-~~~~~~~~DPdG~~iel~~~  368 (376)
                      +..|++|.|+   |+++++++|+++|+++.. +|...+.+ ..+.+||+|||||.|||+++
T Consensus        86 g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           86 GLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            7789999999   999999999999999987 46554433 24789999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.54  E-value=2.9e-14  Score=114.58  Aligned_cols=108  Identities=17%  Similarity=0.124  Sum_probs=81.8

Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHH
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  325 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~  325 (376)
                      .++.|.|+|++++.+||+++|||++...  .  ..+  .++..+    +..+.|......   . ..+..|++|.|+|++
T Consensus         7 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~--~--~~~--~~~~~~----~~~l~l~~~~~~---~-~~~~~~~~~~v~dvd   72 (122)
T 1qto_A            7 AVPVLTAVDVPANVSFWVDTLGFEKDFG--D--RDF--AGVRRG----DIRLHISRTEHQ---I-VADNTSAWIEVTDPD   72 (122)
T ss_dssp             CCCEEEESSHHHHHHHHHHTTCCEEEEE--C--SSE--EEEEET----TEEEEEEECSCH---H-HHTTCEEEEEESCHH
T ss_pred             eeEEEEcCCHHHHHHHHHhccCcEEeeC--C--CCE--EEEEEC----CEEEEEEcCCCC---C-CCCceEEEEEECCHH
Confidence            4788999999999999999999999754  1  223  333332    345555432211   1 123369999999999


Q ss_pred             HHHHHHHHc------CC--eeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          326 KTAEAIKLS------GG--KITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       326 ~~~~~l~~~------G~--~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +++++++++      |+  ++..+|...+.+  +.++++|||||.|||.+++
T Consensus        73 ~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (122)
T 1qto_A           73 ALHEEWARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAGNCVHFTAGE  122 (122)
T ss_dssp             HHHHHHTTTSCSCTTCTTSCEECCCEEETTE--EEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHhhccccccCccccccCCCcCCCCC--cEEEEECCCCCEEEEecCC
Confidence            999999999      99  888888776663  7899999999999999864

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.54  E-value=6.3e-14  Score=113.18  Aligned_cols=111  Identities=21%  Similarity=0.288  Sum_probs=82.7

Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHH
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  325 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~  325 (376)
                      .++.|.|+|++++.+||++ |||++...    +..+  .++..+    +..+.|....+.   ....+.+|++|.|+|++
T Consensus         5 ~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dv~   70 (126)
T 1ecs_A            5 ATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDLA   70 (126)
T ss_dssp             EEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCHH
T ss_pred             EEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECCHH
Confidence            4678899999999999998 99999754    1223  334432    345566443221   12356789999999999


Q ss_pred             HHHHHHHHcCCee-------ecCCccCCCCCceEEEEECCCCCeEEEEecccc
Q 017144          326 KTAEAIKLSGGKI-------TREPGPLPGINTKITACLDPDGWKSVFVDNLDF  371 (376)
Q Consensus       326 ~~~~~l~~~G~~~-------~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  371 (376)
                      +++++++++|+++       ..+|.+.+.+ .+.++++|||||.|||++...+
T Consensus        71 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           71 EFYRQCKSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             HHHHHHHHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEECCC-
T ss_pred             HHHHHHHHCCCccccccCccccCCcccCcc-cEEEEEECCCCCEEEEecchhh
Confidence            9999999999994       6667666654 4889999999999999998753

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.54  E-value=5e-14  Score=116.07  Aligned_cols=116  Identities=16%  Similarity=0.181  Sum_probs=83.9

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEccc-----CCC-cc-ccCCCceeE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYN-----HGV-TE-YDKGNGYAQ  316 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~-----~~~-~~-~~~g~g~~h  316 (376)
                      .+.|+.|.|+|++++.+||+++|||++......+  .+.  .+..+    ...+.+...     ... .. ...+++ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~--~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--IFR--GLDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--TEE--EEECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--ceE--EeecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            6899999999999999999999999986543222  232  23322    233433211     010 01 112345 59


Q ss_pred             EEEEeC---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          317 IAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       317 iaf~V~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ++|.|+   |+++++++|+++|+++..+|...+++ .+.+||+|||||.|||++..
T Consensus        79 ~~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  133 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYH-WYQAVLLDPERNVFRINNVL  133 (141)
T ss_dssp             EEEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCeEecCccccCCc-cEEEEEECCCCCEEEEEEcc
Confidence            999999   59999999999999998888766654 58999999999999999865

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.54  E-value=2.5e-14  Score=117.46  Aligned_cols=117  Identities=19%  Similarity=0.142  Sum_probs=86.6

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccC------CCccccCCCceeEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH------GVTEYDKGNGYAQI  317 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~------~~~~~~~g~g~~hi  317 (376)
                      ++.|+.|.|.|++++++||++ |||++....+  ...+..  +..++   +..+.+....      .......+.+..|+
T Consensus         4 ~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~l   75 (138)
T 2a4x_A            4 RISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHTE--AVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   75 (138)
T ss_dssp             EEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEEE--EECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCSEEE
T ss_pred             eeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceEE--EEcCC---CeEEEEecCccchhhCcccCCCCCCCeEEE
Confidence            578999999999999999998 9999875532  222322  22211   3455554311      00011234678999


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          318 AIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       318 af~V~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +|.|+   |+++++++|+++|+++..+|...+.+ .+.+||+|||||.|||++..
T Consensus        76 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           76 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEECTTCCEEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            99999   99999999999999998887766654 58899999999999999865

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.53  E-value=2.7e-14  Score=119.10  Aligned_cols=114  Identities=19%  Similarity=0.304  Sum_probs=82.9

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCC--------ceEEEEcccCCCccccCCCce
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK--------NAVLELTYNHGVTEYDKGNGY  314 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~~l~l~~~~~~~~~~~g~g~  314 (376)
                      .++.|+.|.|.|++++++||+++|||++...   ++..+.+  +..++...        .....+...      ..+++ 
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~~--~~~~~~~~~l~~~~~~~~~~~l~~~------~~~~g-   91 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYSM--VTTGPVGESGMPDEPGYINGGMMQR------GEVTT-   91 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEEE--EECSCBCTTSSBCSSSCBCEEEEES------SSSCS-
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEEE--EEeCCcceeecccCCcccccceeec------CCCCe-
Confidence            5789999999999999999999999999752   1233433  33222110        011111110      11134 


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          315 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       315 ~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +|++|.|+|+++++++|+++|+++..+|.+.++. ++.+|++|||||.|||+++.
T Consensus        92 ~~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           92 PVVTVDVESIESALERIESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CEEEEECSCHHHHHHHHHHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHHHHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            4999999999999999999999999887766632 38999999999999999865

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.53  E-value=4.7e-14  Score=115.35  Aligned_cols=114  Identities=18%  Similarity=0.202  Sum_probs=79.9

Q ss_pred             cccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHH
Q 017144          246 CQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVY  325 (376)
Q Consensus       246 ~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~  325 (376)
                      .+..|.|.|++++++||+++|||++....+  .  +  .++..+    +..+.|...........+.+..|++|.|+|++
T Consensus         9 ~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~dv~   78 (134)
T 3fcd_A            9 ITPFLHIPDMQEALTLFCDTLGFELKYRHS--N--Y--AYLELS----GCGLRLLEEPARKIIPDGIARVAICIDVSDID   78 (134)
T ss_dssp             EEEEEEESCHHHHHHHHTTTTCCEEEEEET--T--E--EEEEET----TEEEEEEECCCC---------EEEEEECSCHH
T ss_pred             ceeEEEECCHHHHHHHHHhccCcEEEEeCC--C--e--EEEEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeCCHH
Confidence            346788999999999999999999976532  1  3  334432    35566655433211222334579999999999


Q ss_pred             HHHHHHHHcC----CeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          326 KTAEAIKLSG----GKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       326 ~~~~~l~~~G----~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +++++++++|    +++..+|...+.+ .+.++++|||||.|||.+...
T Consensus        79 ~~~~~l~~~g~~~g~~i~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  126 (134)
T 3fcd_A           79 SLHTKLSPALENLPADQVEPLKNMPYG-QREFQVRMPDGDWLNFTAPLA  126 (134)
T ss_dssp             HHHHHHHHHHTTSCGGGEEEEEECTTS-EEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHHHhcCCccCCccccCCcccCCC-cEEEEEECCCCCEEEEEEccc
Confidence            9999999655    4567677666654 489999999999999998764

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.53  E-value=1.2e-13  Score=112.89  Aligned_cols=110  Identities=24%  Similarity=0.289  Sum_probs=83.8

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC-
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~-  322 (376)
                      .++|+.|.|+|++++.+||+++|||++....+  .  .  .++..+    +..+.+......  .....+..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--G--AYLELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--E--EEEEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C--c--eEEecC----CEEEEEEeCCCC--CCCCCCcceEEEEccH
Confidence            47899999999999999999999999976432  1  1  223332    244555543211  123457889999997 


Q ss_pred             -CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 -DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 -Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                       |+++++++++++|+++..++..  +  ++.+|++||+||.|||++..
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~--~--~~~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           72 ADFARFAAQLRAHGVREWKQNRS--E--GDSFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             HHHHHHHHHHHHTTCCEEECCCS--S--SCEEEEECTTCCEEEEESCC
T ss_pred             HHHHHHHHHHHHCCCceecCCCC--C--eEEEEEECCCCCEEEEEECC
Confidence             9999999999999999876542  3  47899999999999999876

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.52  E-value=4.3e-14  Score=111.64  Aligned_cols=107  Identities=21%  Similarity=0.236  Sum_probs=80.4

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe--
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V--  321 (376)
                      ++.|+.|.|+|++++.+||+++|||++....   +..+  .++..++   +..+.+......    ..++.+|++|.|  
T Consensus         3 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~--~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~~   70 (113)
T 1xqa_A            3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNAF--AVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQES   70 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTTE--EEEECTT---CCEEEEEECSSC----CCCTTCCEEEECSS
T ss_pred             eeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCcE--EEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcCC
Confidence            5899999999999999999999999987542   1223  3444322   345666543221    135688999999  


Q ss_pred             -CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          322 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       322 -~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                       +|+++++++++++|+++. +|.. .+  .+.+|++|||||.|||+
T Consensus        71 ~~d~~~~~~~l~~~G~~~~-~p~~-~~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           71 EEQVDKINQRLKEDGFLVE-PPKH-AH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCC-CCEE-C---CEEEEEEETTTEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCEEe-cCcC-CC--cEEEEEECCCCcEEEEe
Confidence             899999999999999975 4543 32  58999999999999996

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.52  E-value=1.1e-13  Score=114.99  Aligned_cols=117  Identities=21%  Similarity=0.108  Sum_probs=80.2

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceE----
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH----  186 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~h----  186 (376)
                      ...++.|+.|.|+|++++++||+++|||++.......+ .+  .++  +    . .+.+... ............|    
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~--~~~--g----~-~l~l~~~-~~~~~~~~~~~~~~~~g   86 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GF--GDY--G----C-VFDYPSE-VAVAHLTPFRGFHLFKG   86 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SC--EEE--E----E-EESSCTT-TTSCC--CCCSEEEEES
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-Cc--cEE--c----c-EEEEecc-CCCcccccccccceeec
Confidence            35689999999999999999999999999864221111 11  122  2    1 1333111 1110001101122    


Q ss_pred             ------EEE-EeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          187 ------FGI-AVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       187 ------i~f-~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                            .+| .|+|+++++++|+++|+++..+|...++ +.+.+||+|||||.|||+++.
T Consensus        87 ~~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           87 EPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence                  255 9999999999999999999888877764 578899999999999999864

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.51  E-value=8.6e-14  Score=115.67  Aligned_cols=115  Identities=18%  Similarity=0.244  Sum_probs=81.9

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCC---CccccCCCceeEEEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG---VTEYDKGNGYAQIAI  319 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~---~~~~~~g~g~~hiaf  319 (376)
                      .+++|+.|.|.|++++++||+++|||++....+    ....  +..+    ...+.+.....   .......++..|++|
T Consensus        26 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~----~~~~--l~~g----~~~l~l~~~~~~~~~~~~~~~~g~~~~~~   95 (147)
T 3zw5_A           26 RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE----DRKA--LCFG----DQKFNLHEVGKEFEPKAAHPVPGSLDICL   95 (147)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT----TEEE--EEET----TEEEEEEETTSCCSSCCSSCCTTCCEEEE
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC----CceE--EEEC----CcEEEEEEcCCCcCcccCCCCCCCceEEE
Confidence            468999999999999999999999999974321    1222  3322    23444433211   111123457788999


Q ss_pred             EeC-CHHHHHHHHHHcCCeeecCCccCCCC--CceEEEEECCCCCeEEEEe
Q 017144          320 GTD-DVYKTAEAIKLSGGKITREPGPLPGI--NTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       320 ~V~-Dl~~~~~~l~~~G~~~~~~p~~~~~~--~~~~~~~~DPdG~~iel~~  367 (376)
                      .+. |+++++++|+++|+++..+|...++.  ..+.+||+|||||.|||++
T Consensus        96 ~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           96 ITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             ECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            886 99999999999999988766543322  2368999999999999986

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.51  E-value=2.5e-13  Score=125.62  Aligned_cols=137  Identities=19%  Similarity=0.218  Sum_probs=95.6

Q ss_pred             CCccccCccc-cccccc----------ccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCC
Q 017144           94 PTSNTVTEQN-VLDWVK----------SDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED  162 (376)
Q Consensus        94 ~~~~~~~p~~-~~~~~~----------~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~  162 (376)
                      ..+++.||+| .++..+          .....+.|+.|.|+|++++++||+++|||++......+...  .+++..+.. 
T Consensus       133 ~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~--~~~~~~~~~-  209 (282)
T 3oxh_A          133 RMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQN--YRVLKAGDA-  209 (282)
T ss_dssp             EEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHHHHHHCCEEEEC---------CEEEEETTE-
T ss_pred             EEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHHHHHhCCeeeeccCCCCcc--eEEEEcCCc-
Confidence            4567789999 222111          12357999999999999999999999999987543111122  233443321 


Q ss_pred             ceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          163 SHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       163 ~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                       . ...+....    .....+..|++|.|+|+++++++++++|+++..+|.+.++ +++.++|+||+||.|+|++..+
T Consensus       210 -~-~~~~~~~~----~~~~~~~~~~~~~v~dvd~~~~~~~~~G~~~~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          210 -E-VGGCMEPP----MPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPS-VGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             -E-EEEEECCS----STTCCSEEEEEEECSCHHHHHHHHHHTTCEEEEEEEEETT-TEEEEEEECTTSCEEEEEEEC-
T ss_pred             -c-EeeecCCC----CCCCCCeEEEEEEeCCHHHHHHHHHHcCCEEecCCeEcCC-CeEEEEEECCCCCEEEEEecCC
Confidence             1 12222221    1123456789999999999999999999999888888764 5789999999999999998764

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.51  E-value=1.9e-13  Score=111.40  Aligned_cols=118  Identities=15%  Similarity=0.115  Sum_probs=83.4

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      +.+++|+.|.|.|++++.+||+++|||++....+    .+  ..+..++    ..+.+....... .+...+..|++|.+
T Consensus         7 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~--~~~~~~g----~~~~l~~~~~~~-~~~~~~~~h~~~~~   75 (135)
T 3rri_A            7 PNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----DR--ITLDFFG----DQLVCHLSDRWD-REVSMYPRHFGITF   75 (135)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TE--EEEEETT----EEEEEEECSCSC-SSCCSSSCEEEEEC
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----Cc--EEEEEeC----CEEEEEEcCccc-ccCCCCCCeEEEEE
Confidence            4579999999999999999999999999965432    12  2333211    123333221111 11334567999988


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCccCC---CCCceEEEEECCCCCeEEEEeccc
Q 017144          322 D---DVYKTAEAIKLSGGKITREPGPLP---GINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       322 ~---Dl~~~~~~l~~~G~~~~~~p~~~~---~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      .   |+++++++|+++|+++..+|....   .+..+.+||+|||||.|||++..+
T Consensus        76 ~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~  130 (135)
T 3rri_A           76 RDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFD  130 (135)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESS
T ss_pred             cChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECC
Confidence            5   599999999999999987765431   223478999999999999998764

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.51  E-value=9.7e-14  Score=115.48  Aligned_cols=117  Identities=20%  Similarity=0.164  Sum_probs=79.0

Q ss_pred             CCCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEccc------CCC-ccccCCCc
Q 017144          241 TPEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYN------HGV-TEYDKGNG  313 (376)
Q Consensus       241 ~~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~------~~~-~~~~~g~g  313 (376)
                      ...++.||+|.|+|++++++||+++ |+........+.  ........     ...+.+...      .+. .....+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~l-g~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGTL-GFEFNPKFTDES--CACMVVSE-----QAFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHHT-TCEECGGGCBTT--EEEEEEET-----TEEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHHh-CCCcceeecCCc--eeEEeecC-----cceEeeeccccccccccccCCCCCCCC
Confidence            3567999999999999999999884 555544332222  22222221     122222110      000 01123345


Q ss_pred             eeEEEEEeC---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          314 YAQIAIGTD---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       314 ~~hiaf~V~---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      ..|++|.|+   |+++++++++++|+++..+|.++++  .+.+||+|||||.|||+.
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~  132 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTALGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMW  132 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHHHHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEE
T ss_pred             eeEEEEEeccHHHHHHHHHHHHhcCceeeccccccCC--EEEEEEEcCCCCEEEEEE
Confidence            579999995   5888999999999999999887765  588999999999999974

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.51  E-value=1.4e-13  Score=113.24  Aligned_cols=112  Identities=21%  Similarity=0.315  Sum_probs=84.3

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc-cccCCCceeEEEEEeC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT-EYDKGNGYAQIAIGTD  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~~~~g~g~~hiaf~V~  322 (376)
                      .+.|+.|.|.|++++.+||+++|||++....+  .  .  .++..+    +..+.|....... ......+.+|++|.|+
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~v~   73 (141)
T 1npb_A            4 SLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--G--AYLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFTVA   73 (141)
T ss_dssp             EEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--E--EEEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEECC
T ss_pred             eEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--c--EEEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEEeC
Confidence            57899999999999999999999999976532  1  1  233332    2345554432211 1123457889999996


Q ss_pred             --CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 --DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 --Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                        |+++++++|+++|+++..++.  ++  .+.+|++|||||.|||++..
T Consensus        74 ~~d~~~~~~~l~~~G~~~~~~~~--~~--~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           74 EEDFEPLSQRLEQAGVTIWKQNK--SE--GASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCC--SS--SEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCeEeccCC--Cc--eeEEEEECCCCCEEEEEECc
Confidence              999999999999999987653  22  48899999999999999875

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.50  E-value=4.9e-14  Score=115.86  Aligned_cols=114  Identities=14%  Similarity=0.179  Sum_probs=83.2

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEE-----ccc---CCCccccCCCce
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLEL-----TYN---HGVTEYDKGNGY  314 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l-----~~~---~~~~~~~~g~g~  314 (376)
                      -++.|+.|.|+|++++.+||+++|||++....  +  .+ + .+..     +..+..     ...   ........+.+.
T Consensus         7 ~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~-~-~~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~~~   75 (141)
T 2qnt_A            7 MRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--SF-V-LFET-----GFAIHEGRSLEETIWRTSSDAQEAYGRRN   75 (141)
T ss_dssp             CCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--SE-E-EETT-----SCEEEEHHHHHHHHHSCCC--CCCSCCSS
T ss_pred             cccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc-E-EEec-----cceeccCchhhhhccccCCccccccCCCc
Confidence            46899999999999999999999999987542  1  12 2 2221     122321     110   111112334678


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          315 AQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       315 ~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +|++|.|+|++++++++++ |++++.+|.+.+.+ .+.+|++|||||.|||++..
T Consensus        76 ~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  128 (141)
T 2qnt_A           76 MLLYFEHADVDAAFQDIAP-HVELIHPLERQAWG-QRVFRFYDPDGHAIEVGESL  128 (141)
T ss_dssp             CEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTS-CEEEEEECTTCCEEEEEECC
T ss_pred             eEEEEEeCcHHHHHHHHHc-CCccccCCccCCCC-CEEEEEECCCCCEEEEEecc
Confidence            8999999999999999999 99998888777754 48899999999999999875

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.47  E-value=3.1e-13  Score=112.33  Aligned_cols=115  Identities=13%  Similarity=0.142  Sum_probs=78.9

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEece-ecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccC--C-------C
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRK-RDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDK--G-------N  312 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~--g-------~  312 (376)
                      .++.|+.|.|.|++++.+||+++|||++... ...++  +.+ + +       ..+.|...........  +       +
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~--~~~-~-g-------~~l~l~~~~~~~~~~~~~~~~~~~g~~   88 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG--FGD-Y-G-------CVFDYPSEVAVAHLTPFRGFHLFKGEP   88 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS--CEE-E-E-------EEESSCTTTTSCC--CCCSEEEEESCC
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC--ccE-E-c-------cEEEEeccCCCcccccccccceeeccC
Confidence            3579999999999999999999999998532 22222  222 2 2       1133311111000000  1       1


Q ss_pred             ceeEEEE-EeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          313 GYAQIAI-GTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       313 g~~hiaf-~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ..++.+| .|+|+++++++++++|+++..+|...+.+ .+.+|++|||||.|||+++.
T Consensus        89 ~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           89 IKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWG-ARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             CCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCc-cEEEEEECCCCCEEEEeeec
Confidence            1122265 99999999999999999999888777753 47899999999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.47  E-value=3e-13  Score=111.93  Aligned_cols=114  Identities=15%  Similarity=0.181  Sum_probs=78.4

Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccC---C-----CccccCCCceeEEE
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNH---G-----VTEYDKGNGYAQIA  318 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~---~-----~~~~~~g~g~~hia  318 (376)
                      .+.|.|.|++++.+||+++|||++......+  .+  .++..+    ...+.|....   .     ......+.+. +++
T Consensus         8 ~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~~--~~l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~~   78 (145)
T 2rk9_A            8 VPELYCFDINVSQSFFVDVLGFEVKYERPDE--EF--VYLTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NFQ   78 (145)
T ss_dssp             EEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--TE--EEEEET----TEEEEEEEC-----------CCSSTTTTE-EEE
T ss_pred             eEEEEECCHHHHHHHHHhccCCEEEeecCCC--CE--EEEEcC----CeEEEEEeccCCCcccccCccccCCCCce-EEE
Confidence            4678899999999999999999987432221  23  233332    2344444321   1     0011223455 499


Q ss_pred             EEeCCHHHHHHHHHH-cCCeeecCCccCC------CCCceEEEEECCCCCeEEEEecc
Q 017144          319 IGTDDVYKTAEAIKL-SGGKITREPGPLP------GINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       319 f~V~Dl~~~~~~l~~-~G~~~~~~p~~~~------~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |.|+|+++++++|++ +|+++..+|...+      ....+.++|+|||||.|||++..
T Consensus        79 ~~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~  136 (145)
T 2rk9_A           79 WDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDI  136 (145)
T ss_dssp             EECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC-
T ss_pred             EEECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcC
Confidence            999999999999999 9999987765421      12247889999999999999875

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.40  E-value=5.1e-12  Score=107.43  Aligned_cols=120  Identities=13%  Similarity=0.102  Sum_probs=79.9

Q ss_pred             eeeEEEEEEeCC--hhHHHHHHHHhcCCEEEEEee-------cCCCceEEEEEeeCCCCceEEEEEEecCCC-C-CCCC-
Q 017144          113 RRMLHVVYRVGD--LDKTIKFYTECLGMKLLRKRD-------IPEDRYTNAFLGYGPEDSHFVVELTYNYGV-D-KYDI-  180 (376)
Q Consensus       113 ~~i~Hv~l~v~D--l~~a~~FY~~vLG~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~-~-~~~~-  180 (376)
                      ..-.++.|.|+|  ++++++||+++|||++.....       .+.+....+.+..+.    ..+.+...... . +... 
T Consensus        23 ~~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g----~~l~l~~~~~~~~~~~~~~   98 (166)
T 1xy7_A           23 FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAG----SSFVVCDVSSLPGFSTAKS   98 (166)
T ss_dssp             EEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETT----EEEEEEEGGGSTTCCCCCT
T ss_pred             CceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECC----eEEEEeCCCcccCCccccC
Confidence            345788999999  999999999999999865331       111112223344432    13333332111 0 1111 


Q ss_pred             -CCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeec--CCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          181 -GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV--KGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       181 -~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                       +.+ .|++|.|+|+++++++|+++|++ ..+|.+.  ++  ++.++|+||+||.|+|++...
T Consensus        99 ~~~g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A           99 EGSG-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             TSCC-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             CCCc-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence             233 38999999999999999999999 8888877  64  688999999999999997653

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.40  E-value=1.4e-12  Score=124.67  Aligned_cols=127  Identities=17%  Similarity=0.289  Sum_probs=91.5

Q ss_pred             cceeeEEEEEEeC--ChhHHHHHHHHhcCCEEEEEee--cCCCceEEEEEeeCCCCceEEEEEEecCCCC-CC-------
Q 017144          111 DKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRD--IPEDRYTNAFLGYGPEDSHFVVELTYNYGVD-KY-------  178 (376)
Q Consensus       111 ~~~~i~Hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~--~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~-~~-------  178 (376)
                      ..++|+||+|.|+  |++++.+||+++|||++.....  .+.......++..+..  ++.+++....... ..       
T Consensus       155 ~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g--~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          155 DLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASG--AVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             CCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTS--CCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCC--CEEEEEeeecCCCCCchhHHHHH
Confidence            4678999999999  9999999999999999985432  1222234566665443  3456666543211 10       


Q ss_pred             -CCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecC---------CCC-------eEEEEEEcCCCCEEEEeecC
Q 017144          179 -DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK---------GGN-------TVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       179 -~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~---------~~~-------~~~~~~~DPdG~~iel~~~~  239 (376)
                       ..+.|++||+|.|+|+++++++|+++|+++...|....         .+.       ..++|++||||+.++|++..
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence             13568999999999999999999999999877763321         000       13789999999999999753

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.37  E-value=4e-11  Score=99.94  Aligned_cols=121  Identities=16%  Similarity=0.151  Sum_probs=80.8

Q ss_pred             EEEEEeC-ChhHHHHHHHHhcCCEEEEEeecCC------------CceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCC
Q 017144          117 HVVYRVG-DLDKTIKFYTECLGMKLLRKRDIPE------------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTG  183 (376)
Q Consensus       117 Hv~l~v~-Dl~~a~~FY~~vLG~~~~~~~~~~~------------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g  183 (376)
                      +..|.|. |+++|++||+++||+++.......+            +....+.+..+..    .+.+.........+...|
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~----~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF----ALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE----EEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCE----EEEEEcCCCccCCCCCCc
Confidence            4788998 9999999999999999876432211            2222233444321    232332211001112234


Q ss_pred             ceEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCC
Q 017144          184 FGHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP  244 (376)
Q Consensus       184 ~~hi~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  244 (376)
                       .+++|.|+|   +++++++|. +|+++..+|.+.++ +.+.++|+||+|+.|+|.+.....+.
T Consensus        82 -~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~~~~~~  142 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQDREGG  142 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESCC----
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEecccCCC
Confidence             479999999   789999985 89999999888876 56888999999999999987655443

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.37  E-value=3.4e-12  Score=108.51  Aligned_cols=118  Identities=18%  Similarity=0.143  Sum_probs=77.4

Q ss_pred             cccccccCC--hhHHHHHHHHhhCCEEecee-------cCCCCCeEEEEeecCCCCCceEEEEcccCCC--ccccCC-Cc
Q 017144          246 CQVMLRVGD--LDRAINFYKKAFGMELLRKR-------DNPDYKYTIAVMGYGPEDKNAVLELTYNHGV--TEYDKG-NG  313 (376)
Q Consensus       246 ~~v~L~v~D--~~~a~~FY~~~lG~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~--~~~~~g-~g  313 (376)
                      .+..|.|.|  ++++++||+++|||++....       ..+.+.+....+..+    +..+.+......  .+...+ ..
T Consensus        26 i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~~~  101 (166)
T 1xy7_A           26 FKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGS  101 (166)
T ss_dssp             EEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSC
T ss_pred             EEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCCCC
Confidence            567788999  99999999999999987433       111122222223322    223333321110  001110 22


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeeecCCccC--CCCCceEEEEECCCCCeEEEEeccc
Q 017144          314 YAQIAIGTDDVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       314 ~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      .+|++|.|+|+++++++|+++|++ +.+|.+.  ++  .++++|+||+||.|+|++...
T Consensus       102 g~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          102 GVTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             CCEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             cEEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence            359999999999999999999999 9888777  65  589999999999999998763

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.34  E-value=3.4e-11  Score=111.37  Aligned_cols=124  Identities=13%  Similarity=0.019  Sum_probs=86.1

Q ss_pred             cccccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceE
Q 017144          107 WVKSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (376)
Q Consensus       107 ~~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~h  186 (376)
                      |.........++.+.|.|++++++||+++|||++......+ +  ....+..+.......+.+...+.    ..+....+
T Consensus       176 ~~~~~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  248 (301)
T 2zw5_A          176 AEEPLTTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-P--EFAEAALTPWSAGPRFRLAAVPG----PGPVEPVR  248 (301)
T ss_dssp             SCCSCEEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-E--EEEEEESSSSSSSSEEEEEECCC----SSCCCCCE
T ss_pred             hhhhcccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-c--cEEEEEcCCCccccccccccCCC----cCCCCceE
Confidence            44444456678999999999999999999999987443321 1  22345544311111222212111    11223457


Q ss_pred             EEEEeC-CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          187 FGIAVE-DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       187 i~f~V~-d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      ++|.|+ |+++++++++++|+++..+|.+.++ +.+.++|+|||||.|+|.++
T Consensus       249 ~~~~v~~dvd~~~~~~~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          249 LHLDAAGTADSLHRRAVDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCccHHHHHHHHHHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            999999 9999999999999999888877764 46789999999999999874

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.31  E-value=1.3e-10  Score=95.08  Aligned_cols=117  Identities=15%  Similarity=0.210  Sum_probs=79.8

Q ss_pred             eeEEEEEEeC--ChhHHHHHHHHhc-CCEEEEEeecCC------CceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCc
Q 017144          114 RMLHVVYRVG--DLDKTIKFYTECL-GMKLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGF  184 (376)
Q Consensus       114 ~i~Hv~l~v~--Dl~~a~~FY~~vL-G~~~~~~~~~~~------~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~  184 (376)
                      ++. ..|.+.  |++++++||+++| |+++.......+      +....+.+..++.    .+.+......+....+. -
T Consensus         6 ~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~----~~~~~~~~~~~~~~~~~-~   79 (136)
T 1u7i_A            6 RVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ----SVHCIDSHVRHAFDFTP-A   79 (136)
T ss_dssp             EEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEEESSCCSCCCCT-T
T ss_pred             cce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCE----EEEEECCCCCCCCCCCC-c
Confidence            454 668886  9999999999999 999875322211      2222333444431    22222211001111122 3


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          185 GHFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       185 ~hi~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      ..++|.|+|   +++++++|. +|+++..+|.+.++ +.+..+++||+|+.|+|..+
T Consensus        80 ~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~-G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEEC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCC-cceEEEEECCCCCEEEEEec
Confidence            468999999   999999999 99999999998886 46788899999999999874

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.26  E-value=2.1e-10  Score=105.96  Aligned_cols=171  Identities=11%  Similarity=0.035  Sum_probs=103.8

Q ss_pred             CceEEEEEeCC-HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC---CCCCccccccccCChhHH
Q 017144          183 GFGHFGIAVED-VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP---TPEPLCQVMLRVGDLDRA  258 (376)
Q Consensus       183 g~~hi~f~V~d-~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~---~~~~~~~v~L~v~D~~~a  258 (376)
                      |+..+.+.|.. =.+..+-+++.|.+....-.......+       -|-..+++....-   .+....++.|.|.|++++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g-------~d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~~a  197 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRP-------GPHEMVVLGKARAEEPLTTLAVITELPVRDVAAT  197 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSS-------SCEEEEEEEEESSCCSCEEEEEEEEEEESCHHHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCC-------CCeEEEEEeHHHhhhhcccceeEEEEEeCCHHHH
Confidence            66667666643 234455667888876532111110000       0122333332221   112245677889999999


Q ss_pred             HHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC-CHHHHHHHHHHcCCe
Q 017144          259 INFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-DVYKTAEAIKLSGGK  337 (376)
Q Consensus       259 ~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~-Dl~~~~~~l~~~G~~  337 (376)
                      .+||+++|||++......+ +.+  ..+..++......+.+...    +...+....+++|.|+ |+++++++++++|++
T Consensus       198 ~~FY~~~lG~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~dvd~~~~~~~~~G~~  270 (301)
T 2zw5_A          198 LRLVEAALGARTAFAIGDP-PEF--AEAALTPWSAGPRFRLAAV----PGPGPVEPVRLHLDAAGTADSLHRRAVDAGAR  270 (301)
T ss_dssp             HHHHHHHSCCEEEEEEETT-EEE--EEEESSSSSSSSEEEEEEC----CCSSCCCCCEEEEEEESCHHHHHHHHHHTTCC
T ss_pred             HHHHHHhcCCeEeeecCCC-ccE--EEEEcCCCccccccccccC----CCcCCCCceEEEEEcCccHHHHHHHHHHcCCc
Confidence            9999999999987433222 222  2344332111122222111    0111223568999999 999999999999999


Q ss_pred             eecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          338 ITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       338 ~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      ++.+|...+.| .+.++|+|||||.|+|.++
T Consensus       271 ~~~~~~~~~~g-~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          271 VDGPPVRRPWG-RSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             EEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred             cccCcccCCCc-ceEEEEECCCCCEEEeeCC
Confidence            99888777754 4889999999999999875

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.25  E-value=1.2e-10  Score=96.92  Aligned_cols=115  Identities=21%  Similarity=0.200  Sum_probs=77.8

Q ss_pred             cccccC-ChhHHHHHHHHhhCCEEeceecC---------C-C--CCeEEEEeecCCCCCceEEEEcccCCCccccCCCce
Q 017144          248 VMLRVG-DLDRAINFYKKAFGMELLRKRDN---------P-D--YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGY  314 (376)
Q Consensus       248 v~L~v~-D~~~a~~FY~~~lG~~~~~~~~~---------~-~--~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~  314 (376)
                      ..|.+. |.++|++||+++||+++......         + +  +......+..+    +..+.+.............+ 
T Consensus         7 p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~d~~~~~~~~~~~g-   81 (149)
T 1u6l_A            7 PYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEGIKG-   81 (149)
T ss_dssp             EEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCCCCS-
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEEcCCCccCCCCCCc-
Confidence            457787 99999999999999998754211         1 1  22222333322    22333322111001112233 


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          315 AQIAIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       315 ~hiaf~V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ++++|.|+|   +++++++|+ +|++++.+|.+.+++ .++.+++||+|+.|+|++..
T Consensus        82 ~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG-~r~~~v~Dp~G~~w~l~~~~  137 (149)
T 1u6l_A           82 CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQ  137 (149)
T ss_dssp             EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESC
T ss_pred             eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcc-cceEEEECCCCCEEEEEEec
Confidence            689999998   789999986 899999999888875 48899999999999999864

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.22  E-value=6.4e-11  Score=107.45  Aligned_cols=113  Identities=18%  Similarity=0.247  Sum_probs=83.0

Q ss_pred             CCCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          242 PEPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       242 ~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      ...+.|++|.|+|++++.+||+++|||++.....    ..  +.+..+    ...+.+....     ..+.+..|++|.|
T Consensus        24 ~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~----~~--~~L~~g----~~~l~l~~~~-----~~~~~~~hiaf~V   88 (252)
T 3pkv_A           24 MTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA----DA--FTIQLG----VSQIQFRAAA-----DGTKPFYHIAINI   88 (252)
T ss_dssp             -CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS----SE--EEEEET----TEEEEEEECC-----TTCCCCCEEEEEE
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC----CE--EEEEeC----CEEEEEEECC-----CCCCCeeEEEEEe
Confidence            3579999999999999999999999999876532    12  334433    2455554422     1245688999998


Q ss_pred             C--CHHHHHHHHHHcCCeeecC-CccC---CCCCceEEEEECCCCCeEEEEeccc
Q 017144          322 D--DVYKTAEAIKLSGGKITRE-PGPL---PGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       322 ~--Dl~~~~~~l~~~G~~~~~~-p~~~---~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +  |++++.++|+++ +++..+ +...   ..+..+.+||+|||||.|||++..+
T Consensus        89 ~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           89 AANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             CTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             cHHHHHHHHHHHHhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            4  699999999999 998763 2220   1233689999999999999999764

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.21  E-value=2.3e-10  Score=93.68  Aligned_cols=114  Identities=19%  Similarity=0.199  Sum_probs=78.0

Q ss_pred             cccccC--ChhHHHHHHHHhh-CCEEecee--cC----CCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEE
Q 017144          248 VMLRVG--DLDRAINFYKKAF-GMELLRKR--DN----PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIA  318 (376)
Q Consensus       248 v~L~v~--D~~~a~~FY~~~l-G~~~~~~~--~~----~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hia  318 (376)
                      ..|.+.  |.++|++||+++| |+++....  ..    +++......+..++    ..+.+.......... ....+.++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g----~~~~~~~~~~~~~~~-~~~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGD----QSVHCIDSHVRHAFD-FTPAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETT----EEEEEEEESSCCSCC-CCTTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECC----EEEEEECCCCCCCCC-CCCceEEE
Confidence            456676  9999999999999 99987421  11    12333333333321    222222111001111 22346899


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          319 IGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       319 f~V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      |.|+|   +++++++++ +|++++.+|.+.+.+ .++.+++||+|+.|+|..+
T Consensus        84 ~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEALS-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHHH-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEec
Confidence            99999   999999999 999999999988875 4889999999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.17  E-value=1e-10  Score=112.64  Aligned_cols=124  Identities=22%  Similarity=0.262  Sum_probs=92.3

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecC--CCCCeEEEEeecCCCCCceEEEEcccCCCc-c---------ccC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN--PDYKYTIAVMGYGPEDKNAVLELTYNHGVT-E---------YDK  310 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~---------~~~  310 (376)
                      ..++|+.+.|+|++++++||+++|||++......  .........++.+    ...++|....... .         ..+
T Consensus        21 ~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~   96 (381)
T 1t47_A           21 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAEH   96 (381)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             ceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHHHhc
Confidence            5789999999999999999999999999865321  1223455555543    3556666532111 1         123


Q ss_pred             CCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCC--CCCceEEEEECCCCCeEEEEeccc
Q 017144          311 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       311 g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      |.++.|++|.|+|+++++++++++|++++.+|....  .+..+++.++||+|+.++|+++.+
T Consensus        97 g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~  158 (381)
T 1t47_A           97 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  158 (381)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCC
Confidence            679999999999999999999999999998775321  122367889999999999999754

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.08  E-value=4.4e-10  Score=109.51  Aligned_cols=123  Identities=15%  Similarity=0.108  Sum_probs=91.7

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCC--CCCeEEEEeecCCCCCceEEEEcccCCCc---------------
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--DYKYTIAVMGYGPEDKNAVLELTYNHGVT---------------  306 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~l~l~~~~~~~---------------  306 (376)
                      +++||.|.|+|++++++||+++|||++......+  ...+..+.++.+    ...+.|.......               
T Consensus        25 ~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~~p~~  100 (424)
T 1sqd_A           25 RFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTTASIP  100 (424)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCCCSST
T ss_pred             eEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCcccccccccccccccc
Confidence            5799999999999999999999999987664322  223444555532    3556665442211               


Q ss_pred             ----c------ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecccc
Q 017144          307 ----E------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  371 (376)
Q Consensus       307 ----~------~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  371 (376)
                          .      ..+|.++.|++|.|+|+++++++++++|++++.+|....+ ..++..+++|+|..++|+++.+.
T Consensus       101 ~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          101 SFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             cccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                0      1245789999999999999999999999999988765433 24678888999999999987643

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.07  E-value=4.7e-09  Score=86.26  Aligned_cols=116  Identities=11%  Similarity=0.156  Sum_probs=77.1

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhc-CCEEEEEeecC------CCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCce
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECL-GMKLLRKRDIP------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFG  185 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vL-G~~~~~~~~~~------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~  185 (376)
                      ++|...-+.+.|.+++++||+++| |+++.......      ++....+.+..++.    .+.... .. +...  .. .
T Consensus         4 ~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~----~~m~~d-~~-~~~~--~~-~   74 (139)
T 1tsj_A            4 PKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ----VFMAID-AN-SGTE--LP-I   74 (139)
T ss_dssp             CSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE----EEEEEC-----------C-C
T ss_pred             CceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCE----EEEEEC-CC-CCCC--ce-E
Confidence            345555455569999999999999 99987532222      12333344544421    111111 11 1111  11 4


Q ss_pred             EEEEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          186 HFGIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       186 hi~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .+++.|+|   +++++++|. +|+++..+|.+.++ +.+..+++||+|+.|+|....
T Consensus        75 sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           75 SLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             CEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHh-CCCEEeecccccCC-CceEEEEECCCCCEEEEeecc
Confidence            68899987   778899998 79999999999886 678999999999999999644

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.06  E-value=5.8e-10  Score=106.41  Aligned_cols=125  Identities=16%  Similarity=0.144  Sum_probs=85.3

Q ss_pred             cceeeEEEEEEeC--ChhHHHHHHHHhcCCEEEEEeecCCC--ce--EEEEEeeCCCCceEEEEEEec-CCCCC------
Q 017144          111 DKRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPED--RY--TNAFLGYGPEDSHFVVELTYN-YGVDK------  177 (376)
Q Consensus       111 ~~~~i~Hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~--~~~~l~~g~~~~~~~l~l~~~-~~~~~------  177 (376)
                      ...+|+||++.|+  |++++.+||+++|||++......++.  ..  ..++...+    ...+++... .....      
T Consensus       155 ~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g----~~~i~L~~~~~~~~~~~~~~~  230 (357)
T 1cjx_A          155 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDG----MIRIPLNEESSKGAGQIEEFL  230 (357)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTS----SCEEEEEEECTTCCSHHHHHH
T ss_pred             CeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCC----CEEEEEeeecCCCCChHHHhH
Confidence            4578999999999  99999999999999999876543221  11  12233222    345666654 21111      


Q ss_pred             -CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeec-CCeec-------CCCCe---------EEEEEEc----CCCCEEEE
Q 017144          178 -YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTR-EPGPV-------KGGNT---------VIAFIED----PDGYKFEL  235 (376)
Q Consensus       178 -~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~-~p~~~-------~~~~~---------~~~~~~D----PdG~~iel  235 (376)
                       ...+.|++|+||.|+|+++++++|+++|+++.. .|...       .+..+         .+++-.|    |+|+.++|
T Consensus       231 ~~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqi  310 (357)
T 1cjx_A          231 MQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQI  310 (357)
T ss_dssp             HHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEE
T ss_pred             HhcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEE
Confidence             114578999999999999999999999999877 55211       01111         1466778    88998888


Q ss_pred             eecC
Q 017144          236 LERG  239 (376)
Q Consensus       236 ~~~~  239 (376)
                      ....
T Consensus       311 ft~~  314 (357)
T 1cjx_A          311 FSET  314 (357)
T ss_dssp             EBCC
T ss_pred             eccC
Confidence            8543

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.00  E-value=1.4e-09  Score=104.51  Aligned_cols=125  Identities=22%  Similarity=0.279  Sum_probs=94.0

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCC--CeEEEEeecCCCCCceEEEEcccCCCc--cc-----cCCCc
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVT--EY-----DKGNG  313 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~l~~~~~~~--~~-----~~g~g  313 (376)
                      ..++|+.+.|+|++++++||+++|||++....+.+.+  .....++..+    ...++|..+..+.  +.     .+|++
T Consensus        10 ~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G----~i~~~L~~p~~p~s~~~a~fl~~hG~G   85 (393)
T 3isq_A           10 LHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG----KIVFVLSSALNPWNKEMGDHLVKHGDG   85 (393)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             ceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC----CEEEEEecCCCCCchHHHHHHHhcCCc
Confidence            3589999999999999999999999999876443322  2334455533    4566666532221  11     35789


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCC--CCceEEEEECCCCCeEEEEecccc
Q 017144          314 YAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVDNLDF  371 (376)
Q Consensus       314 ~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~~~  371 (376)
                      +.|++|.|+|+++++++++++|++++.+|...+.  +..++..+++|.|..+.|+++..+
T Consensus        86 v~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y  145 (393)
T 3isq_A           86 VKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNY  145 (393)
T ss_dssp             EEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             EEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccC
Confidence            9999999999999999999999999988864432  224778899999999999997543

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.99  E-value=2e-08  Score=85.29  Aligned_cols=117  Identities=13%  Similarity=0.161  Sum_probs=81.0

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecC--------------CCceEEEEEeeCCCCceEEEEEEecCCCCCCCCC
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP--------------EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG  181 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~--------------~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~  181 (376)
                      ....|.+.|.+++++||+++||+++.......              ++....+.+.+++    ..+.+....+. .+..+
T Consensus        27 i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g----~~lm~~D~~g~-~~~~~  101 (172)
T 3l20_A           27 LFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLG----VKVLCSDSFGR-ADKIN  101 (172)
T ss_dssp             EEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETT----EEEEEEECTTC-CCCCC
T ss_pred             EEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECC----EEEEEECCCCC-CCCCC
Confidence            45567777999999999999999987654331              1334455666653    23333332221 22223


Q ss_pred             CCceEEEEEe--------CCHHHHHHHHHHcC-CeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          182 TGFGHFGIAV--------EDVAKTVDLVKAKG-GKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       182 ~g~~hi~f~V--------~d~d~~~~rl~~~G-~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .++ .+++.+        +|+++++++|.+.| +++..+|.+.++ +.+..+++||+|+.|+|....
T Consensus       102 ~~~-sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~w-G~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          102 NGI-SLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFW-GGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             SSE-EEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTT-SSEEEEEECTTSCEEEEEEEC
T ss_pred             CcE-EEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            333 356666        57899999999999 799999888886 457788999999999997543

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.97  E-value=2.9e-08  Score=81.35  Aligned_cols=113  Identities=11%  Similarity=0.175  Sum_probs=77.6

Q ss_pred             EEEEeC-ChhHHHHHHHHhcC-CEEEEEeec------CCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          118 VVYRVG-DLDKTIKFYTECLG-MKLLRKRDI------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       118 v~l~v~-Dl~~a~~FY~~vLG-~~~~~~~~~------~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      ..|.+. |.+++++||+++|| .++......      .++....+.+.+++.    .+.+........+..+.+ ..+++
T Consensus        13 P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~----~lm~~d~~~~~~~~~~~~-~~l~l   87 (138)
T 3oms_A           13 TFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQ----EFMCIDSYVNHNFTFTPA-MSLYV   87 (138)
T ss_dssp             EEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEECSSCCSCCCCTT-SCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCE----EEEEEcCCCCCCCCCCCC-EEEEE
Confidence            346667 89999999999999 666543212      223444566666532    333332211112222233 35899


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       190 ~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      .|+|   +++++++|. .|+++..+|.+.++ +.+..+++||+|+.|.|..
T Consensus        88 ~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           88 TCETEEEIDTVFHKLA-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EESSHHHHHHHHHHHH-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEE
T ss_pred             EcCCHHHHHHHHHHHH-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEe
Confidence            9999   999999995 68899999998886 5678899999999999874

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=98.96  E-value=9.1e-09  Score=84.37  Aligned_cols=113  Identities=13%  Similarity=0.105  Sum_probs=77.1

Q ss_pred             ccccC-ChhHHHHHHHHhhC-CEEecee------cCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEE
Q 017144          249 MLRVG-DLDRAINFYKKAFG-MELLRKR------DNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  320 (376)
Q Consensus       249 ~L~v~-D~~~a~~FY~~~lG-~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~  320 (376)
                      .|.+. |.++|++||+++|| .++....      +.+++++....+..+    +..+.+....+...+..+++ ..+++.
T Consensus        14 ~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~~~~-~~l~l~   88 (138)
T 3oms_A           14 FLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTFTPA-MSLYVT   88 (138)
T ss_dssp             EEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCCCTT-SCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCCCCC-EEEEEE
Confidence            35566 89999999999999 5665331      123344545555543    23333332111111222333 578999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          321 TDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       321 V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      |+|   +++++++|. .|++++.+|.+.+.+ .++.+++||+|+.|+|.-.
T Consensus        89 ~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg-~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           89 CETEEEIDTVFHKLA-QDGAILMPLGSYPFS-KKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             ESSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHH-cCCeEecCcccccCC-cEEEEEECCCCCEEEEEeC
Confidence            999   999999995 688999999988875 4899999999999999754

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.92  E-value=2.8e-09  Score=103.61  Aligned_cols=122  Identities=15%  Similarity=0.091  Sum_probs=90.2

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCC--CCeEEEEeecCCCCCceEEEEcccCCC--------------c
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD--YKYTIAVMGYGPEDKNAVLELTYNHGV--------------T  306 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~l~l~~~~~~--------------~  306 (376)
                      .+++||.|.|+|++++.+||++.|||++......+.  .....+++..+    ...++|......              .
T Consensus        30 ~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G----~~~l~L~~~~~~~~~~~~~p~~~~~~~  105 (418)
T 1sp8_A           30 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSAA  105 (418)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCHH
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeC----CEEEEEecCCCCcccccccccccccch
Confidence            358999999999999999999999999876643221  23555556543    356666554221              0


Q ss_pred             c-----ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          307 E-----YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       307 ~-----~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      .     ..+|+++.|++|.|+|+++++++++++|++++.+|....+ ..++..+++|+|..+.|+++.
T Consensus       106 ~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          106 AARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECC
T ss_pred             hHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccC
Confidence            0     1346799999999999999999999999999988753322 135677788888888888876

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=98.92  E-value=1.2e-08  Score=83.76  Aligned_cols=108  Identities=11%  Similarity=0.079  Sum_probs=72.4

Q ss_pred             ccCChhHHHHHHHHhh-CCEEeceecC------CCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          251 RVGDLDRAINFYKKAF-GMELLRKRDN------PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       251 ~v~D~~~a~~FY~~~l-G~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      .+.|.++|++||+++| |+++......      +++.+..+.+..++    ..+.+.. ..+ .. .. . ..+++.|+|
T Consensus        12 ~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~----~~~m~~d-~~~-~~-~~-~-~sl~~~~~d   82 (139)
T 1tsj_A           12 FNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAID-ANS-GT-EL-P-ISLFVTVKD   82 (139)
T ss_dssp             CSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEEC-----------C-CCEEEECSS
T ss_pred             ECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC----EEEEEEC-CCC-CC-Cc-e-EEEEEECCC
Confidence            3469999999999999 9998743211      12333333343321    1221111 111 11 11 1 468888887


Q ss_pred             ---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          324 ---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       324 ---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                         +++++++|+ +|++++.++.+.+.| .+..+++||+|+.|+|..+.
T Consensus        83 ~~evd~~~~~l~-~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~~  129 (139)
T 1tsj_A           83 TIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALPE  129 (139)
T ss_dssp             HHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHHHh-CCCEEeecccccCCC-ceEEEEECCCCCEEEEeecc
Confidence               788899998 799999999888875 58999999999999998765

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=98.85  E-value=3.2e-08  Score=83.94  Aligned_cols=115  Identities=16%  Similarity=0.079  Sum_probs=78.9

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecC---C-----------CCCeEEEEeecCCCCCceEEEEcccCCCccccCCCc
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDN---P-----------DYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNG  313 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~---~-----------~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g  313 (376)
                      ..|.+.|.++|++||+++||.++......   +           ++++..+.+..+    +..+.+....+. .+..+++
T Consensus        29 PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g~-~~~~~~~  103 (172)
T 3l20_A           29 PYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFGR-ADKINNG  103 (172)
T ss_dssp             EEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTTC-CCCCCSS
T ss_pred             EEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCCCc
Confidence            34566799999999999999997644322   1           234444445443    233444332222 2223333


Q ss_pred             eeEEEEEe--------CCHHHHHHHHHHcC-CeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          314 YAQIAIGT--------DDVYKTAEAIKLSG-GKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       314 ~~hiaf~V--------~Dl~~~~~~l~~~G-~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      . .+.+.+        +|+++++++|.+.| ++++.++.+.+++ .++.+++||+|+.|+|..+.
T Consensus       104 ~-sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG-~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          104 I-SLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWG-GKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             E-EEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTS-SEEEEEECTTSCEEEEEEEC
T ss_pred             E-EEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCC-cEEEEEECCCCCEEEEEeCC
Confidence            2 455555        58999999999999 7999999888876 48899999999999997754

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.45  E-value=1.4e-05  Score=72.71  Aligned_cols=159  Identities=12%  Similarity=0.137  Sum_probs=101.7

Q ss_pred             cccccccccceeeEEEEEEeCChhHHHHHHHHhcC-----CEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC--
Q 017144          103 NVLDWVKSDKRRMLHVVYRVGDLDKTIKFYTECLG-----MKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV--  175 (376)
Q Consensus       103 ~~~~~~~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG-----~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~--  175 (376)
                      |+......|..+|+|+++.|++++        .||     |.+.....++.....+..+.++    ..+||+..-.+.  
T Consensus        13 ~~~~~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fd----g~YLElIai~~~~~   80 (274)
T 3p8a_A           13 GLVPRGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYIN----ENYIELLDVENNEK   80 (274)
T ss_dssp             --------CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECS----SSEEEEEEESCHHH
T ss_pred             ccccCCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeC----CEEEEEEeecCccc
Confidence            444455678889999999999984        367     9988877666555556666663    347888774321  


Q ss_pred             ---------C--CC-------CCCCCceEEEEEeCCHHHHHHHHHHcCCeeecC---CeecCCCC---eEEEEEEcCC--
Q 017144          176 ---------D--KY-------DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTRE---PGPVKGGN---TVIAFIEDPD--  229 (376)
Q Consensus       176 ---------~--~~-------~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~---p~~~~~~~---~~~~~~~DPd--  229 (376)
                               +  .+       ..+.|+.++++.++|+++..+++.++|+.+..+   ....+.|.   -+.++..|++  
T Consensus        81 ~~~~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~  160 (274)
T 3p8a_A           81 LKKMAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDD  160 (274)
T ss_dssp             HHHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCC
T ss_pred             ccccccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCcc
Confidence                     1  11       245799999999999999999999999876321   11112211   1234445654  


Q ss_pred             CCEE-EEeecC-CC-------------CCCccccccccCChhHHHHHHHHhhCCEEece
Q 017144          230 GYKF-ELLERG-PT-------------PEPLCQVMLRVGDLDRAINFYKKAFGMELLRK  273 (376)
Q Consensus       230 G~~i-el~~~~-~~-------------~~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~  273 (376)
                      +..+ -+++.. +.             ...|.++.+.+.|++++++.|+++||......
T Consensus       161 ~~~~PFfiqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          161 EIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             SSCCCEEEEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             CCCccEEEecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            2211 223221 11             23588999999999999999999999998644

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.23  E-value=8.1e-06  Score=72.06  Aligned_cols=112  Identities=14%  Similarity=0.145  Sum_probs=72.2

Q ss_pred             ccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEE---EEEe
Q 017144          245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQI---AIGT  321 (376)
Q Consensus       245 ~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hi---af~V  321 (376)
                      +....|+|.|.++.++||+++|||++..+..      ..+.++.+.  ....+.|-+.+.. ......|.-|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~--~~~~L~lEEsp~~-~~~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQT--GLEKLVLEEAPSM-RTRKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTT--CCEEEEEEECCTT-TCBCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCC--CcceEEEEeCCCc-ccccccccceeeeEEEEc
Confidence            3457789999999999999999999976532      234555432  2334444442211 11334566666   6999


Q ss_pred             CCHHHHHHHHHHcCCeeec-CCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          322 DDVYKTAEAIKLSGGKITR-EPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       322 ~Dl~~~~~~l~~~G~~~~~-~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      ++-.+....|.. +.++-. ..++|    ++.+|+.||+||.||+....+
T Consensus        82 p~~~el~~lL~~-~~~~~~~~~gdh----gyA~yl~dPEGn~ieiyae~d  126 (244)
T 3e0r_A           82 ENPLEIEGILSK-TDSIHRLYKGQN----GYAFEIFSPEDDLILIHAEDD  126 (244)
T ss_dssp             SSHHHHHHHHTT-CSCCSEEEECSS----SEEEEEECTTCCEEEEECCSC
T ss_pred             CCHHHHHHHHhc-ccccccccccCC----cEEEEEECCCCCeEEEEEcCC
Confidence            997766665554 554321 11222    457999999999999987653

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.12  E-value=8e-05  Score=62.31  Aligned_cols=131  Identities=13%  Similarity=0.147  Sum_probs=86.4

Q ss_pred             EEEEeC-ChhHHHHHHHHhc-CCEEEEEeec-------CCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE
Q 017144          118 VVYRVG-DLDKTIKFYTECL-GMKLLRKRDI-------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (376)
Q Consensus       118 v~l~v~-Dl~~a~~FY~~vL-G~~~~~~~~~-------~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  188 (376)
                      ..|..+ |.+++.+||+++| |.++......       +++....+-+.+++.    .+.+...  .+.+....++ .+.
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~----~~m~~d~--~p~~~~~~~~-sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI----PCLGLNG--GPAFRHSEAF-SFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE----EEEEEEC--CTTCCCCTTE-EEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE----EEEEECC--CCCcCCCCce-EEE
Confidence            346666 9999999999999 9998743221       123445566666532    2222222  1122223343 578


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCCccccccccCChhHHHHHHHHh
Q 017144          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKA  265 (376)
Q Consensus       189 f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~v~L~v~D~~~a~~FY~~~  265 (376)
                      +.++|   +++++++|.+.|.++.    ..       -.++||.|+.|.|....      -.-.+.-.|.+++.+.++..
T Consensus        82 v~~~d~~e~d~~~~~L~~~Gg~v~----~~-------G~v~D~fGv~W~i~~~~------~~~~~~d~d~~~~~r~~~am  144 (163)
T 1u69_A           82 VATDDQAETDRLWNAIVDNGGEES----AC-------GWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAM  144 (163)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCEEC----ST-------TEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHHhCCCEEE----EE-------EEEECCCCCEEEEEeEc------hHHhccCCCHHHHHHHHHHH
Confidence            88888   6778889988898876    11       15999999999998421      11123457899999999999


Q ss_pred             hCCEEec
Q 017144          266 FGMELLR  272 (376)
Q Consensus       266 lG~~~~~  272 (376)
                      |+|+-.+
T Consensus       145 ~~m~k~d  151 (163)
T 1u69_A          145 MTMGRID  151 (163)
T ss_dssp             TTCSSCC
T ss_pred             HCCccee
Confidence            9986543

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.66  E-value=0.00052  Score=57.31  Aligned_cols=102  Identities=17%  Similarity=0.134  Sum_probs=65.5

Q ss_pred             cccC-ChhHHHHHHHHhh-CCEEeceec--C-----CCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEE
Q 017144          250 LRVG-DLDRAINFYKKAF-GMELLRKRD--N-----PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  320 (376)
Q Consensus       250 L~v~-D~~~a~~FY~~~l-G~~~~~~~~--~-----~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~  320 (376)
                      |... |.+++++||+++| |.++.....  .     ++++...+.+..++    ..+.+... ++ .+...++ ..+.+.
T Consensus        11 L~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g----~~~m~~d~-~p-~~~~~~~-~sl~v~   83 (163)
T 1u69_A           11 LWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG----IPCLGLNG-GP-AFRHSEA-FSFQVA   83 (163)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT----EEEEEEEC-CT-TCCCCTT-EEEEEE
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECC----EEEEEECC-CC-CcCCCCc-eEEEEE
Confidence            4555 9999999999999 988874221  1     13344444444332    23322221 11 1222233 367888


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          321 TDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       321 V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      |+|   +++.+++|.+.|+++.           ++..++||.|+.|.|..+.
T Consensus        84 ~~d~~e~d~~~~~L~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           84 TDDQAETDRLWNAIVDNGGEES-----------ACGWCRDKWGISWQITPRV  124 (163)
T ss_dssp             ESSHHHHHHHHHHHHHTTCEEC-----------STTEEECTTSCEEEEEEHH
T ss_pred             eCCHHHHHHHHHHHHhCCCEEE-----------EEEEEECCCCCEEEEEeEc
Confidence            887   7888999998898876           2348999999999998654

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.14  E-value=0.001  Score=69.43  Aligned_cols=120  Identities=17%  Similarity=0.252  Sum_probs=74.9

Q ss_pred             eeeEEEEEEe---CChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecC-C-------------C
Q 017144          113 RRMLHVVYRV---GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY-G-------------V  175 (376)
Q Consensus       113 ~~i~Hv~l~v---~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~-~-------------~  175 (376)
                      .+...+.+.+   .-++++++||+++|++......+   .....+++.  +.....++++.... +             .
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (941)
T 3opy_B            8 NGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSN---QKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIRNL   82 (941)
T ss_dssp             CEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCS---CCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHHCC
T ss_pred             cceeEEEEEeCCHHHHHHHHHHHHhhccceeccccC---CcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHhhh
Confidence            3555666655   45899999999999997654222   111133443  22234556655431 0             0


Q ss_pred             C----CCCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          176 D----KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       176 ~----~~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      .    ..+...-..|++|.+.|++++.+.|.+.+.++..-|.+..   ...+|+.||+||.|+|.+...
T Consensus        83 ~~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           83 TRSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             C----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCSS
T ss_pred             hcccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCC---CceEEeECCCCCEEEEeccCC
Confidence            0    0001122339999999999999999999998877666543   458889999999999997664

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=96.91  E-value=0.0027  Score=66.28  Aligned_cols=110  Identities=16%  Similarity=0.202  Sum_probs=67.7

Q ss_pred             cCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCc--c---------cc--CCCcee---
Q 017144          252 VGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--E---------YD--KGNGYA---  315 (376)
Q Consensus       252 v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~--~---------~~--~g~g~~---  315 (376)
                      ..-++++++||++.+++......   +.+.....+..  ......+++.......  .         ..  ....-|   
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~~   94 (941)
T 3opy_B           20 ISLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLEE--DQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRSI   94 (941)
T ss_dssp             -CC-HHHHHHHHHTTCCEECSSC---SCCC---EECC--TTSCCEEEEECSSCSCHHHHHHHHHHHCCC----------C
T ss_pred             HHHHHHHHHHHHhhccceecccc---CCcceeEEEec--CCCeEEEEEEeccccchhHHHHHHHHhhhhccccccccccc
Confidence            35699999999999999876522   22222334432  2234555554331110  0         00  011112   


Q ss_pred             --EEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          316 --QIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       316 --hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                        |+.|.+.|++++.+.|.+.+.++-..|....   ...+|..||+||.|+|.+..
T Consensus        95 ~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~---~~e~yt~DPlGNvIgfs~~~  147 (941)
T 3opy_B           95 QSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEIS---PFEVYTVDPLGSLIGFSGFK  147 (941)
T ss_dssp             CCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCS---CEEECCSSCCEEEECC-CCS
T ss_pred             CceEEEEeCCHHHHHHHHHhcCCccccCCCcCC---CceEEeECCCCCEEEEeccC
Confidence              9999999999999999999987766554332   36799999999999998776

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=84.04  E-value=14  Score=38.80  Aligned_cols=50  Identities=16%  Similarity=0.179  Sum_probs=35.8

Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       185 ~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      ..+.|.+.|++++.+.|.+..++.  .|.+..   -..+|..||-||.+.+....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEI--IPSKID---LVEFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCB--CCCC-----CCCEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhccccc--CCCCCC---ceeEEEecCCCCEEeeecCC
Confidence            458899999999999998873332  233322   23678999999999988544

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=81.61  E-value=4.7  Score=36.13  Aligned_cols=34  Identities=9%  Similarity=0.247  Sum_probs=30.4

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEe
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKR  144 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~  144 (376)
                      ...+|.+|++.++|++++.+.|+++||.......
T Consensus       187 Ga~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~~  220 (274)
T 3p8a_A          187 KQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEEN  220 (274)
T ss_dssp             TTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEEC
T ss_pred             ccceEEEEEEEeCCHHHHHHHHHHHhCCCccccC
Confidence            3579999999999999999999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	376
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-29
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-20
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	2e-26
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	1e-16
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-24
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-14
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-18
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	3e-14
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-17
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	9e-08
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	1e-17
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	9e-10
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	6e-17
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-09
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	9e-17
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	1e-07
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	4e-16
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-06
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	8e-16
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	1e-06
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-15
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	1e-09
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	3e-15
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	1e-08
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	4e-15
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	2e-08
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	4e-14
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	8e-06
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	7e-14
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-07
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	7e-14
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-06
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-11
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-05
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	2e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-05
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	4e-11
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	5e-11
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	2e-04
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	5e-11
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	1e-04
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	3e-10
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-04
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	4e-10
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	0.001
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	5e-10
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	6e-06
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-09
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	2e-09
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	1e-08
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-05
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-08
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	1e-05
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	3e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	6e-07
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	7e-07
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	8e-07
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	1e-06
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	7e-05
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	2e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	6e-06
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	2e-06
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	9e-06
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	6e-06
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-04
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	6e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	3e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	3e-04
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	4e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  107 bits (268), Expect = 3e-29
 Identities = 74/132 (56%), Positives = 98/132 (74%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+LH + RVGDL ++I FYT+ LGMKLLR  + PE +Y+ AF+GYGPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
           GVDKY++GT +GH  ++V++ A+  + ++  GG VTRE GPVKGG TVIAF+EDPDGYK 
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 234 ELLERGPTPEPL 245
           EL+E       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 84.0 bits (206), Expect = 3e-20
 Identities = 62/128 (48%), Positives = 85/128 (66%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
            MLRVGDL R+I+FY K  GM+LLR  +NP+YKY++A +GYGPE + AV+ELTYN GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD 367
           Y+ G  Y  IA+  D+  +  E I+ +GG +TRE GP+ G  T I    DPDG+K   ++
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 125

Query: 368 NLDFLKEL 375
             D  + L
Sbjct: 126 EKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score =  100 bits (250), Expect = 2e-26
 Identities = 68/132 (51%), Positives = 82/132 (62%), Gaps = 5/132 (3%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           RRMLH + RVGDLD++IKFYTE LGMK+LRK D+PED+YT  FLGYGPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           YGV  Y     +GH  I VEDV + V  ++     +  E          +AF+ DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDESGF-----MAFVVDPDGYY 116

Query: 233 FELLERGPTPEP 244
            ELL      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 73.9 bits (180), Expect = 1e-16
 Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 5/129 (3%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
            M+RVGDLDR+I FY +  GM++LRK D P+ KYT+  +GYGPE  + VLELTYN+GVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD 367
           Y     Y  IAIG +DV +    ++     I  E       +  +   +DPDG+    ++
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLN 121

Query: 368 NLDFLKELE 376
               +++ E
Sbjct: 122 EKTMMEKAE 130

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (239), Expect = 2e-24
 Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVE----- 168
            +   + RV D  K++ FYT  LGM L++K D P  +++  FL Y  ++     +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 169 ----------LTYNYGVDKYD---------IGTGFGHFGIAVEDVAKTVDLVKAKGGKVT 209
                     LT+N+G +  +            GFGH GIAV DV       +  G K  
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 210 REPGPVKGGNTVIAFIEDPDGYKFELLERGPTP 242
           ++P    G    +AFI+DPDGY  E+L      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (167), Expect = 2e-14
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 30/152 (19%)

Query: 239 GPTPEP----LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPE--- 291
              P      L Q MLRV D  ++++FY +  GM L++K D P  K+++  + Y  +   
Sbjct: 14  DADPSTKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDI 73

Query: 292 ------------DKNAVLELTYNHGVTEYD---------KGNGYAQIAIGTDDVYKTAEA 330
                        + A LELT+N G  + +            G+  I I   DVY   + 
Sbjct: 74  PKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKR 133

Query: 331 IKLSGGKITREPGPLPGINTKITACLDPDGWK 362
            +  G K  ++P    G    +    DPDG+ 
Sbjct: 134 FEELGVKFVKKPD--DGKMKGLAFIQDPDGYW 163

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 78.8 bits (193), Expect = 2e-18
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 8/124 (6%)

Query: 115 MLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYG 174
            + +    G LD+ I+FY E L +K +       + Y      +G   + + +E T   G
Sbjct: 10  QIRIARPTGQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVM--FGLPHADYHLEFTQYEG 66

Query: 175 VDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
                +          V    ++A     +K  G +      P          IEDPDG+
Sbjct: 67  GSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDGW 124

Query: 232 KFEL 235
           +   
Sbjct: 125 RIVF 128

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 66.9 bits (162), Expect = 3e-14
 Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 6/127 (4%)

Query: 245 LCQVMLRV----GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT 300
                +R+    G LD  I FY++   ++ + +    +    +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 301 YNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                      +          ++      +K  G +      P            DPDG
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGG--VTIEDPDG 123

Query: 361 WKSVFVD 367
           W+ VF++
Sbjct: 124 WRIVFMN 130

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 77.0 bits (188), Expect = 1e-17
 Identities = 17/135 (12%), Positives = 33/135 (24%), Gaps = 4/135 (2%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVV--ELT 170
           +   H+     + ++   FY   LG++ ++     +D             S         
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 171 YNYGVDKYDIGTGFGHFGIAVEDVAKTVD-LVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
                  Y         G+ V           + +   V             + F ED +
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAE 123

Query: 230 GYKFELLERGPTPEP 244
           G +  LL        
Sbjct: 124 GLRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 48.9 bits (115), Expect = 9e-08
 Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 2/115 (1%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIA--VMGYGPEDKNAVLELTYNHGV 305
           + +   + +   +FYK   G+  ++   N D                   +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 306 TEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
             Y   N   +I +            +       +        N       D +G
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 77.6 bits (190), Expect = 1e-17
 Identities = 22/143 (15%), Positives = 35/143 (24%), Gaps = 18/143 (12%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
               HV     D       ++  LG  L  + D+      +A L        F+    Y 
Sbjct: 12  LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYA 71

Query: 173 YGVDKYDI-----------------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPV 215
           +G D                     G       + V D         A G +    P  +
Sbjct: 72  HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDL 131

Query: 216 KGGNTVIAFIEDPDGYKFELLER 238
             G   +A +E         +  
Sbjct: 132 GRG-FRLAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 54.9 bits (131), Expect = 9e-10
 Identities = 19/117 (16%), Positives = 28/117 (23%), Gaps = 17/117 (14%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V L   D   A   +    G  L  + D        A +       + +    Y HG   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 308 -----------------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPG 347
                             D G     +A+   D      A   +G +    P  L  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 75.6 bits (185), Expect = 6e-17
 Identities = 24/149 (16%), Positives = 43/149 (28%), Gaps = 24/149 (16%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           +R  H+ +  GD     + ++  LGM+   K D+      +A       D  F+    Y+
Sbjct: 11  KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYS 70

Query: 173 YGVDKYDIG-----------------------TGFGHFGIAVEDVAKTVDLVKAKGGKVT 209
             +   +I                         G     I VED      +  A G   +
Sbjct: 71  PSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPS 130

Query: 210 REPGPVKGGNTVIAFIEDPDGYKFELLER 238
             P  +      IA ++         +  
Sbjct: 131 SPPIVLNEA-VTIAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.7 bits (128), Expect = 2e-09
 Identities = 16/123 (13%), Positives = 27/123 (21%), Gaps = 23/123 (18%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           +    GD       +    GM    K D        A       D   +    Y+  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 308 YDKG-----------------------NGYAQIAIGTDDVYKTAEAIKLSGGKITREPGP 344
            +                          G   +AI  +D          +G   +  P  
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIV 135

Query: 345 LPG 347
           L  
Sbjct: 136 LNE 138

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 9e-17
 Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 10/140 (7%)

Query: 109 KSDKRRML---HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF 165
           K ++ R L    V + VG+  +   FY   +G + L  + +                  F
Sbjct: 3   KPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVF 62

Query: 166 VVELTYNYGVDKYDI-----GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVK--GG 218
           V+    N    +        G G       VED    V   + +G K+ REP   +   G
Sbjct: 63  VLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFG 122

Query: 219 NTVIAFIEDPDGYKFELLER 238
               A ++        L+E+
Sbjct: 123 KVKFAVLQTYGDTTHTLVEK 142

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 1e-07
 Identities = 30/141 (21%), Positives = 41/141 (29%), Gaps = 12/141 (8%)

Query: 239 GPTPEP-----LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDK 293
           GP PE         V   VG+  +A +FY    G E L  +        +          
Sbjct: 1   GPKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKI 60

Query: 294 NAVLELTYNHGVTEYDK-----GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI 348
             VL    N    E        G+G   IA   +D     +  +  G KI REP      
Sbjct: 61  VFVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDK 120

Query: 349 NTKIT--ACLDPDGWKSVFVD 367
             K+               V+
Sbjct: 121 FGKVKFAVLQTYGDTTHTLVE 141

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 73.0 bits (178), Expect = 4e-16
 Identities = 20/134 (14%), Positives = 37/134 (27%), Gaps = 11/134 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R  H +    +L  T   +T+ LG  L  +           F          +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQF--------LSLSTKAHDV 56

Query: 174 GVDKYDIGTGFGHFGIAVEDV---AKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDG 230
               +       H    +E      +  DL+      +   P      +    +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 231 YKFELLERGPTPEP 244
            + E+   G    P
Sbjct: 117 NRNEVFCGGDYNYP 130

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 14/113 (12%), Positives = 35/113 (30%), Gaps = 5/113 (4%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
            ++   +L    + + K  G  L  +  + +       +    +  +         G   
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKG--- 65

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
             + +  +      +D+ + A+ I ++   I   P      + K     DP G
Sbjct: 66  --RLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 71.6 bits (174), Expect = 8e-16
 Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 12/136 (8%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL---- 169
            + HV Y   D D+  K+Y E  G   L + + PE       +    + +  + ++    
Sbjct: 7   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 66

Query: 170 ------TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIA 223
                 T    + K++   G  H    V+D+      ++ +G ++  +   +  G   I 
Sbjct: 67  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRIN 126

Query: 224 FI--EDPDGYKFELLE 237
           F+  +   G   EL +
Sbjct: 127 FMHPKSGKGVLIELTQ 142

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 45.4 bits (106), Expect = 1e-06
 Identities = 19/126 (15%), Positives = 43/126 (34%), Gaps = 14/126 (11%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGP--EDKNAVLELTY---- 301
           V     D D A  +Y++ FG   L + +NP+      +M       +    +++      
Sbjct: 11  VAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLND 70

Query: 302 ----NHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL- 356
                  + +++   G   +A   DD+   +  ++  G ++  +  P  G        + 
Sbjct: 71  ESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDE-PKLGTGGNRINFMH 129

Query: 357 --DPDG 360
                G
Sbjct: 130 PKSGKG 135

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 71.1 bits (173), Expect = 1e-15
 Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 8/120 (6%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTN-AFLGYGPEDSHFVVELTYNYGV 175
           H+ + V DL++  +        + +   D  +   +   F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
              +       F I   D  +  + V   G  +      V+G    I +  D D + FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDNHMFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 53.4 bits (127), Expect = 1e-09
 Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 6/113 (5%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           +   V DL+R     +  F    +   D   +  +        +     + +    G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD-----IWVAIMQGEKL 62

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
            ++   +    I   D  + AE +   G  +      + G    I    D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDN 114

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 70.5 bits (171), Expect = 3e-15
 Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 18/141 (12%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPE---------DSH 164
           RM +V   V  LD  I F+ E +G+ L  + ++  +                     D H
Sbjct: 9   RMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGH 67

Query: 165 FVVELTYNYGV-------DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKG 217
             +EL+                   G+      VED+ + V  +   G ++  E    + 
Sbjct: 68  SRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN 127

Query: 218 GNTVIAFIEDPDGYKFELLER 238
               + +I   +G    L E 
Sbjct: 128 SYR-LCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 51.2 bits (121), Expect = 1e-08
 Identities = 18/129 (13%), Positives = 40/129 (31%), Gaps = 18/129 (13%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V + V  LD AI+F+ +  G+ L  + +                 + A++     H   E
Sbjct: 13  VSIVVESLDNAISFF-EEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIE 71

Query: 308 ----------------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTK 351
                                GY ++    +D+ +    +   G ++  E       + +
Sbjct: 72  LSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYR 130

Query: 352 ITACLDPDG 360
           +      +G
Sbjct: 131 LCYIRGVEG 139

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 70.3 bits (171), Expect = 4e-15
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 10/136 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + M  VV+ VG+  +   +Y+   GM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 173 YGVDKYDI--------GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVI 222
                           G G     I V D           G +   EP  +K  +   V+
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 223 AFIEDPDGYKFELLER 238
           A I      +  L++R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 10/130 (7%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V+  VG+  +A ++Y  AFGM+L+      +     A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 308 YD--------KGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACL--D 357
                      G+G   +AI   D           G +   EP  L   +  +       
Sbjct: 71  GHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIAT 130

Query: 358 PDGWKSVFVD 367
               +   VD
Sbjct: 131 YGKTRHTLVD 140

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 67.0 bits (162), Expect = 4e-14
 Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 10/135 (7%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R  ++   V DL K+ +FY + LG+ +  + +                  + V+     
Sbjct: 15  VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE----NTIYLRSLEEFIHHNLVLRQGPI 70

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V  +       +   +  +V       K  G +  R       G      +EDP G+ 
Sbjct: 71  AAVAAF------AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFP 124

Query: 233 FELLERGPTPEPLCQ 247
           +E        E L Q
Sbjct: 125 YEFFYETEHVERLTQ 139

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 43.1 bits (100), Expect = 8e-06
 Identities = 24/128 (18%), Positives = 36/128 (28%), Gaps = 17/128 (13%)

Query: 240 PTP-EPLCQVM------LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED 292
           PTP  P   ++      + V DL ++  FY    G+ +  + +N  Y             
Sbjct: 5   PTPSVPAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDENTIYLR----SLEEFIH 60

Query: 293 KNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKI 352
            N VL       V        +A       +V       K  G +  R            
Sbjct: 61  HNLVLRQGPIAAV------AAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDS 114

Query: 353 TACLDPDG 360
               DP G
Sbjct: 115 VRVEDPLG 122

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 66.2 bits (160), Expect = 7e-14
 Identities = 22/122 (18%), Positives = 37/122 (30%), Gaps = 9/122 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R  HV  RV D+ K ++ Y E LG+  + + D                      +     
Sbjct: 7   RPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPGMD 66

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
                      G   +  + + +    + A G  V + P             + P G+ F
Sbjct: 67  ---------FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHF 117

Query: 234 EL 235
           EL
Sbjct: 118 EL 119

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 48.1 bits (113), Expect = 1e-07
 Identities = 14/113 (12%), Positives = 31/113 (27%), Gaps = 9/113 (7%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           V LRV D+ +A+  Y +  G+  + + D                        +      +
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKF---------SLVLREAD 61

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
               +      +  D + +    +   G  + + P        +      P G
Sbjct: 62  EPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 66.8 bits (162), Expect = 7e-14
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 9/124 (7%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R+ H      D+ +   +  E LG ++       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGY 231
            +      T   H  I +       D + A       E GP + G +   ++   DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQI------CDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 232 KFEL 235
           + E+
Sbjct: 118 RIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 44.9 bits (105), Expect = 3e-06
 Identities = 16/116 (13%), Positives = 30/116 (25%), Gaps = 9/116 (7%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
                 D+ R   +  +  G  +     + D     A M       +  L       +  
Sbjct: 9   FNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRM-- 65

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGW 361
               +  A       ++ +  + +         E GP     +       LDPDG 
Sbjct: 66  ----HHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 59.1 bits (142), Expect = 2e-11
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 14/119 (11%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V DL  +I FY + LG +L             A+L  G       + L+      
Sbjct: 7   HLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELG----SLWLCLSREPQYG 56

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
                     FGIA  D A+    ++A G  V         G++   +  DPDG++ E 
Sbjct: 57  GPAADYTHYAFGIAAADFARFAAQLRAHG--VREWKQNRSEGDSF--YFLDPDGHRLEA 111

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 23/116 (19%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 304
           L  + L V DL  +I FY+   G  L  + D   Y    ++           L L+    
Sbjct: 5   LNHLTLAVADLPASIAFYRDLLGFRLEARWDQGAYLELGSLW----------LCLSREPQ 54

Query: 305 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                    +    I   D  + A  ++  G +  ++              LDPDG
Sbjct: 55  YGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDG 106

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 59.3 bits (142), Expect = 2e-11
 Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 11/123 (8%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + + H+   V DL K++ F+ E LG+ L         R+         +    +      
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHA-------RWNTGAYLTCGDLWVCLSYDEAR 55

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             V   +       F +A ED       ++  G  VT        G +   +  DPDG+K
Sbjct: 56  QYVPPQESDYTHYAFTVAEEDFEPLSQRLEQAG--VTIWKQNKSEGASF--YFLDPDGHK 111

Query: 233 FEL 235
            EL
Sbjct: 112 LEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 18/113 (15%), Positives = 40/113 (35%), Gaps = 11/113 (9%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           + L V DL +++ F+ +  G+ L  + +   Y     +      D+           V  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEAR-------QYVPP 60

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
            +    +    +  +D    ++ ++ +G  I ++              LDPDG
Sbjct: 61  QESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDG 109

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 59.0 bits (142), Expect = 4e-11
 Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 12/131 (9%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           + M  V   V  LDK     TE  G   + + D        A       ++   + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 173 YGVDKYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
            G  +        H  I V    ++A   + VK +G   +   G +        +  + +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 230 GYKFELLERGP 240
           G  FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 57.3 bits (137), Expect = 5e-11
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 13/123 (10%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNY 173
           R +       +  +   FY + LGM              + ++           ++++  
Sbjct: 2   RRVVANIATPEPARAQAFYGDILGM---------PVAMDHGWIVTHASPLEAHAQVSFAR 52

Query: 174 GVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKF 233
              +   GT      I V++  +    +   G  +   P     G     F+ DP G   
Sbjct: 53  ---EGGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLI 108

Query: 234 ELL 236
            +L
Sbjct: 109 NIL 111

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 20/113 (17%), Positives = 28/113 (24%), Gaps = 13/113 (11%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
             +   +  RA  FY    GM              I       E    V          E
Sbjct: 6   ANIATPEPARAQAFYGDILGMP------VAMDHGWIVTHASPLEAHAQV------SFARE 53

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
              G     ++I  D+  +    I  +G  I   P        +     DP G
Sbjct: 54  GGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFG 105

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 57.7 bits (138), Expect = 5e-11
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
           R + ++ + V D+     F T+ LG+      D                     V+    
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSRAWRIAVQ---- 52

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDG 230
               + D     G+       +A+  D +K  G  VT     +     V   I   DP G
Sbjct: 53  --QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 231 YKFEL 235
              E+
Sbjct: 111 LPLEI 115

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 39.2 bits (90), Expect = 1e-04
 Identities = 19/118 (16%), Positives = 32/118 (27%), Gaps = 14/118 (11%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHG 304
           L  +   V D+    +F  +  G+      DN D     +                    
Sbjct: 5   LGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAW------------RIAVQ 52

Query: 305 VTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGI--NTKITACLDPDG 360
             E D              + + A+ +K +G  +T     L      T +    DP G
Sbjct: 53  QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 54.8 bits (130), Expect = 3e-10
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 13/119 (10%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H+   V D+    +F  +  G+     R        +         +   +         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRD---------NDGFILTLMKGKEV 56

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +Y      G    + E V K    +K  G  V          +    ++E P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPK----HAHAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 38.6 bits (88), Expect = 2e-04
 Identities = 18/113 (15%), Positives = 28/113 (24%), Gaps = 13/113 (11%)

Query: 248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTE 307
           + L V D+  A  F +K FG+     R N                              +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFI---------LTLMKGKEVQ 57

Query: 308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           Y K           + V K  + +K  G  +          +        P G
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPKHA----HAYTFYVEAPGG 106

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 55.1 bits (131), Expect = 4e-10
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 4/130 (3%)

Query: 114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVEL-TYN 172
           R+      V D+ K+++FY +            P              D+   V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
           +                    V K    +   G +   +P     G    A ++DPDG  
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPDGNV 120

Query: 233 FELLERGPTP 242
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 36.6 bits (83), Expect = 0.001
 Identities = 17/117 (14%), Positives = 32/117 (27%), Gaps = 2/117 (1%)

Query: 245 LCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGY-GPEDKNAVLELTYNH 303
           +    + V D+ +++ FY+K            P  +  +        +    V       
Sbjct: 3   ISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEW 62

Query: 304 GVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                      A     T  V K    +  +G +   +P        +     DPDG
Sbjct: 63  QAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDG 118

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 56.5 bits (136), Expect = 5e-10
 Identities = 22/136 (16%), Positives = 39/136 (28%), Gaps = 12/136 (8%)

Query: 113 RRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT 170
           + + H+ + V  G +     FY +    +  R  DI  +            D    + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 171 YNYGVDKYDIG--------TGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVI 222
                    I          G  H     +D+ KT D +K  G +      P      ++
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFM--TAPPDTYYEML 121

Query: 223 AFIEDPDGYKFELLER 238
                  G   + L+ 
Sbjct: 122 EGRLPDHGEPVDQLQA 137

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 22/101 (21%), Positives = 32/101 (31%), Gaps = 8/101 (7%)

Query: 250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT--- 306
           +  G +    NFY+K F     R  D       +        D    + L          
Sbjct: 13  VYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQ 72

Query: 307 -----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP 342
                    G G   +A  TDD+ KT +A+K  G +    P
Sbjct: 73  IEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP 113

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 53.8 bits (128), Expect = 1e-09
 Identities = 19/125 (15%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN 172
            R+ ++ + V D+     F T+ +G+               A            V+    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 173 YGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDG 230
               + D     G        + +  D ++  G   TR    +     V+  +  +DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 231 YKFEL 235
              E+
Sbjct: 111 LPLEI 115

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 53.6 bits (128), Expect = 2e-09
 Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
           H V  V D  K + FYTE LG  L    DI     T+    +   +          + + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIP 72

Query: 177 KYDIGTGFGHFGIAV---EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           K        HF +     +DV    D + A G   +   G      T+  + + P   
Sbjct: 73  K-----RIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPM 124

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 50.4 bits (119), Expect = 1e-08
 Identities = 16/120 (13%), Positives = 28/120 (23%), Gaps = 8/120 (6%)

Query: 116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV 175
              V    D+ + ++F+T+ LG   +   D        A +                   
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 176 DKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFEL 235
           +        G   +  E         +   G    E      G      + DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 117

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 41.5 bits (96), Expect = 2e-05
 Identities = 16/112 (14%), Positives = 32/112 (28%), Gaps = 8/112 (7%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 308
           +L   D+  A+ F+    G   +   D+        V  +    ++ V+       V   
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQDQVVPDNTQAWVWVR 68

Query: 309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                     +  +     +   + + G    E    P    +  A  DP G
Sbjct: 69  G------LDELYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAG 112

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 50.2 bits (119), Expect = 2e-08
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 12/121 (9%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            +   V ++ +        L  K         D   + F  +       ++  + N+ V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKA--------DYANDGFAQFTIGSHCLML--SQNHLVP 54

Query: 177 KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL 236
             +  +G     I VEDV +    +   G KV   P     G      ++ P G   +  
Sbjct: 55  LENFQSGI-IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFY 112

Query: 237 E 237
            
Sbjct: 113 R 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 42.1 bits (98), Expect = 1e-05
 Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 12/114 (10%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVT 306
           Q+ + V ++ +     +     +        +  +            +  L L+ NH V 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY----ANDGFAQ------FTIGSHCLMLSQNHLVP 54

Query: 307 EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
             +  +G   I I  +DV +  + +   G K+   P       T+      P G
Sbjct: 55  LENFQSGII-IHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAG 106

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 51.7 bits (123), Expect = 3e-08
 Identities = 21/139 (15%), Positives = 44/139 (31%), Gaps = 25/139 (17%)

Query: 113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE--DRYT---NAFLGYGPEDSHFVV 167
            R  H+V  V +L     ++    G     +    +     +   +  L    E+    +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 168 -ELTYNYGVD-------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN 219
            E  +             +  G G  H  +A +DV +T+  ++A+      E        
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFE-------- 119

Query: 220 TVIAFIEDPDGYKFELLER 238
               F+  P    ++ + R
Sbjct: 120 ----FMAPPTSDYYDGVRR 134

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 47.8 bits (113), Expect = 6e-07
 Identities = 20/138 (14%), Positives = 40/138 (28%), Gaps = 18/138 (13%)

Query: 252 VGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVM---------GYGPEDKNAVLELTYN 302
           V +L  A  ++    G     +    D     + +                N  +  T  
Sbjct: 17  VPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKR 76

Query: 303 HGVT----EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDP 358
                   ++  G G   +A+ +DDV +T   ++        E    P      +   D 
Sbjct: 77  RSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP-----TSDYYDG 131

Query: 359 DGWKSVFVDNLDFLKELE 376
              ++  V     +KE +
Sbjct: 132 VRRRAGDVLTEAQIKECQ 149

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 46.1 bits (109), Expect = 7e-07
 Identities = 16/134 (11%), Positives = 36/134 (26%), Gaps = 11/134 (8%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVD 176
            + +           + E +G        +   R  N  L Y   + + ++    N    
Sbjct: 12  FIEFASPTPGTLEPIF-EIMGFTK-----VATHRSKNVHL-YRQGEINLILNNEPNSIAS 64

Query: 177 KY--DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFE 234
            +  + G         V+D  K  +     G +              +  I+   G    
Sbjct: 65  YFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGGAPLY 122

Query: 235 LLERGPTPEPLCQV 248
           L++R      +  +
Sbjct: 123 LIDRFGEGSSIYDI 136

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 45.3 bits (106), Expect = 8e-07
 Identities = 22/124 (17%), Positives = 38/124 (30%), Gaps = 20/124 (16%)

Query: 121 RVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDI 180
              D D T  FY   LG  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 181 GTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTV------IAFIEDPDGYKFE 234
              +    + ++D+A+     K+ G + T    P      +      +A + DPDG    
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 235 LLER 238
           L++ 
Sbjct: 115 LIQN 118

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 46.1 bits (109), Expect = 1e-06
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 12/102 (11%)

Query: 253 GDLDRAINFYKKAFGMELLRKRDNPDYK------YTIAVMGYGPEDKNAVLELTYNHGVT 306
           G ++  + FY K  G   +++    D         +  V     + K  + E       +
Sbjct: 17  GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKS 76

Query: 307 ------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP 342
                 E+  G G   IA+ T D+ +T   ++ +G +    P
Sbjct: 77  QIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 41.1 bits (96), Expect = 7e-05
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 14/110 (12%)

Query: 117 HVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHF------VVE 168
           H V  V  G +++ + FY + +G   +++    +     + L               + E
Sbjct: 9   HCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINE 68

Query: 169 LTYNYGVD------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 212
                         ++  G G  H  +   D+ +TV  ++A G +    P
Sbjct: 69  PALAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 12/102 (11%)

Query: 253 GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGP-EDKNAVLELTYNHGVT----- 306
            +++ A  +Y K          D+       + +      +    +++  N         
Sbjct: 35  QEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKS 94

Query: 307 ------EYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP 342
                 +Y+ G G   IA+ T+D+  T   ++  G +    P
Sbjct: 95  QIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 6e-06
 Identities = 16/115 (13%), Positives = 39/115 (33%), Gaps = 16/115 (13%)

Query: 113 RRMLHVVYRV--GDLDKTIKFYTECLGMKLLRKRDIPE--DRYTNAFLGYGPEDSHFVVE 168
             + H+V      +++   ++Y + L        D  +    Y+ +       +    ++
Sbjct: 23  EIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYS-SLRSIVVANYEESIK 81

Query: 169 LTYNYGVD-----------KYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP 212
           +  N                Y+ G G  H  +  ED+  T+  ++ +G +    P
Sbjct: 82  MPINEPAPGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 44.5 bits (104), Expect = 2e-06
 Identities = 14/128 (10%), Positives = 27/128 (21%), Gaps = 9/128 (7%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-------DRYTNAFLGYGPEDSHFVVEL 169
            ++     +   + FY    G         P+           ++ L             
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 69

Query: 170 TYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPD 229
           +          G+G     +  +D    V      G                   + DP 
Sbjct: 70  SLPGFSTAKSEGSGVTFL-LGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPF 127

Query: 230 GYKFELLE 237
           G  +   E
Sbjct: 128 GVTWIFAE 135

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 42.6 bits (99), Expect = 9e-06
 Identities = 18/121 (14%), Positives = 31/121 (25%), Gaps = 9/121 (7%)

Query: 247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTI-------AVMGYGPEDKNAVLEL 299
            +++    +  A+ FYK AFG         P  K          + +         V ++
Sbjct: 10  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDV 68

Query: 300 TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPD 359
           +   G +            +GT D          +G                     DP 
Sbjct: 69  SSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE-LGFKGKVTDPF 127

Query: 360 G 360
           G
Sbjct: 128 G 128

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 42.8 bits (99), Expect = 6e-06
 Identities = 15/124 (12%), Positives = 27/124 (21%), Gaps = 8/124 (6%)

Query: 112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTY 171
           K      V    D+   + F+ + LG +                  +     H +V    
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNT 62

Query: 172 NYGVDKYDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY 231
           +  ++  D       +                  G      G    G      + DP G 
Sbjct: 63  SAWIEVTDPDALHEEW------ARAVSTDYADTSGPAMTPVGESPAGRE--FAVRDPAGN 114

Query: 232 KFEL 235
               
Sbjct: 115 CVHF 118

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 38.2 bits (87), Expect = 3e-04
 Identities = 13/112 (11%), Positives = 32/112 (28%), Gaps = 8/112 (7%)

Query: 249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEY 308
           +L   D+   ++F+    G E      +        +  +    ++ ++    +  +   
Sbjct: 10  VLTAVDVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEHQIVADNTSAWIEVT 69

Query: 309 DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
           D    + +           +     + G      G  P    +  A  DP G
Sbjct: 70  DPDALHEE------WARAVSTDYADTSGPAMTPVGESPAG--REFAVRDPAG 113

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.5 bits (94), Expect = 6e-05
 Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 12/123 (9%)

Query: 123 GDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELT-YNYGVDKYDIG 181
           G+  +    Y + LG  L       +            +D      L   ++ +   D  
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPA-DWKDKIMHARLVVGSFALMASDNH 70

Query: 182 TGFGHFG---------IAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYK 232
             + + G         +  +  A+ +    A+GG V    GP     +      D  G  
Sbjct: 71  PAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVA 129

Query: 233 FEL 235
           + +
Sbjct: 130 WMV 132

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 18/118 (15%), Positives = 30/118 (25%), Gaps = 12/118 (10%)

Query: 253 GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELT--------YNHG 304
           G+   A + Y +  G  L       D      +     +DK     L          ++ 
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPA-DWKDKIMHARLVVGSFALMASDNH 70

Query: 305 VTEYDKGNGYAQIAIGTD--DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDG 360
                +G     I++  D     +        GG +    GP            D  G
Sbjct: 71  PAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTF-WAASFGMFTDRFG 127

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 12/97 (12%), Positives = 32/97 (32%), Gaps = 13/97 (13%)

Query: 252 VGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVM------GYGPEDKNAVLEL------ 299
           V +L  A+ +     G     +    D     + +               + E       
Sbjct: 30  VPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPVHGTKR 89

Query: 300 -TYNHGVTEYDKGNGYAQIAIGTDDVYKTAEAIKLSG 335
            +      E+++G G   +A+ ++D+++T   ++   
Sbjct: 90  KSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.3 bits (91), Expect = 4e-04
 Identities = 12/102 (11%), Positives = 30/102 (29%), Gaps = 13/102 (12%)

Query: 117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE------DRYTNAFLGYGPEDSHFVVELT 170
           H V  V +L   + +     G     +    +         +             + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 171 YNYGVD-------KYDIGTGFGHFGIAVEDVAKTVDLVKAKG 205
           +            +++ G G  H  +  ED+ +T+  ++ + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	376
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.81
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.78
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.77
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.77
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.77
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.75
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.74
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.74
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.74
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.73
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.72
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.72
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.71
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.7
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.69
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.69
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.69
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.68
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.68
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.68
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.68
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.67
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.67
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.67
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.66
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.66
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.66
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.65
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.64
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.64
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.63
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.61
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.6
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.6
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.6
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.59
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.57
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.57
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.56
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.56
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.56
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.56
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.55
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.55
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.54
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.52
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.51
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.51
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.5
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.47
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.47
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.46
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.45
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.38
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.37
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.36
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.32
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.26
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.24
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.23
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.14
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.13
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.09
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.96
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.93
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.92
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.92
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.9
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.89
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.8
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	98.78
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.65
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.59
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.55
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.42
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.97
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	97.83
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.52
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	95.55

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=6.4e-19  Score=141.79  Aligned_cols=131  Identities=56%  Similarity=1.045  Sum_probs=100.6

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      |+|.||+|.|+|++++++||+++|||++..+............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            58999999999999999999999999998887666655555555544433333333333333344445567889999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCC
Q 017144          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPE  243 (376)
Q Consensus       193 d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  243 (376)
                      +++++.++++++|..+...|...+.++.+++|++|||||.|||+|......
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~  131 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  131 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-----
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccc
Confidence            999999999999999988888888778889999999999999999776543

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.78  E-value=2.1e-18  Score=144.59  Aligned_cols=148  Identities=17%  Similarity=0.216  Sum_probs=106.5

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      ..++++||+|.|+|++++++||+++|||++.++...........++..+......  .....      ....++.|++|.
T Consensus         2 ~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~h~~~~   73 (162)
T d1mpya2           2 AAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDV--AFIHH------PEKGRLHHVSFH   73 (162)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSE--EEEEC------SSSSEEEEEEEE
T ss_pred             CcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccc--ccccc------CCCCccceeEEE
Confidence            4568999999999999999999999999998877666655556666655443222  22221      123578999999


Q ss_pred             eCCHH---HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCC-ccccccccCChhHHHHHHHHhh
Q 017144          191 VEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEP-LCQVMLRVGDLDRAINFYKKAF  266 (376)
Q Consensus       191 V~d~d---~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~-~~~v~L~v~D~~~a~~FY~~~l  266 (376)
                      +.+++   ++.++|++.|+++..+|.....+..+++||+|||||.|||+.......+ ..-+........+++.||.+.|
T Consensus        74 ~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~~~~p~~~p~~w~~~~~~~~~~~~~r~l  153 (162)
T d1mpya2          74 LETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL  153 (162)
T ss_dssp             CSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTTCSC
T ss_pred             EeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCcccCCCCCCccCCHHHCCceeEecCCCC
Confidence            99755   6788999999999888888877778999999999999999976543211 1112223355666666655443

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.77  E-value=6.4e-18  Score=138.82  Aligned_cols=126  Identities=21%  Similarity=0.284  Sum_probs=94.8

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC-----------CCceEEEEEeeCCCCceEEEEEEe---cCC
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP-----------EDRYTNAFLGYGPEDSHFVVELTY---NYG  174 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~-----------~~~~~~~~l~~g~~~~~~~l~l~~---~~~  174 (376)
                      +...++|+||+|.|+|++++.+||++ |||++..+....           ......+++.......  .+++..   ...
T Consensus         4 ~~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~l~~~~~~~~   80 (149)
T d1ss4a_           4 KNKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS--RIELSRFLTPPT   80 (149)
T ss_dssp             TCCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSC--EEEEEEEEESCC
T ss_pred             CCCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccce--EEEEEeeccccC
Confidence            45678999999999999999999999 999998765332           1233456666554432  333332   111


Q ss_pred             CCC----CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          175 VDK----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       175 ~~~----~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      ...    .....|+.|++|.|+|+++++++|+++|+++..+|....+ +.+.+|++||||+.|||+|.
T Consensus        81 ~~~~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          81 IADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CCBCTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             cccccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence            111    1134578999999999999999999999999888877664 67889999999999999985

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.77  E-value=1e-17  Score=137.16  Aligned_cols=128  Identities=15%  Similarity=0.165  Sum_probs=93.9

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCC-CCceEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIG-TGFGHFG  188 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~-~g~~hi~  188 (376)
                      .+.+|+||+|.|+|++++++||+++|||++..+....+. ....++++......+..+.+.......+...+ .+++|++
T Consensus         3 ~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hia   82 (144)
T d1zswa1           3 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG   82 (144)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEE
Confidence            356999999999999999999999999999877654332 22334444444444455665554433333333 4589999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          189 IAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       189 f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      |.|+|   ++++.++|++.|+.+.. +...  ++.+.+||+||||+.|||++..+.
T Consensus        83 f~v~~~~~l~~~~~~l~~~gv~~~~-~~~~--~~~~~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          83 LLVPSEDSLHYWKERFEKFDVKHSE-MTTY--ANRPALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECC-SEEE--TTEEEEEEECTTCCEEEEEECTTC
T ss_pred             EecCCchhHHHHhhhhhccceeeeC-cccc--CCeEEEEEECCCCCEEEEEEeCCC
Confidence            99998   67788999999998743 4444  357899999999999999987654

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.77  E-value=1.9e-18  Score=136.35  Aligned_cols=114  Identities=19%  Similarity=0.162  Sum_probs=89.9

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      ++|+|+.|.|+|++++.+||+++||+++....+      ..+.+..|+    ..+.+......+....+.| .+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~----~~l~l~~~~~~~~~~~~~~-~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGS----HCLMLSQNHLVPLENFQSG-IIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETT----EEEEEESSCSSSCCCCCSC-EEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcC----ceeeeeecccCCCCCCCcc-eEEEEEEC
Confidence            479999999999999999999999999865432      235566653    3556665444333223333 47999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       193 d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      |+++++++++++|+++..+|...++ +.+.+||+|||||.||+.+.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEe
Confidence            9999999999999999988888775 56889999999999999875

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=1.2e-17  Score=134.14  Aligned_cols=131  Identities=47%  Similarity=0.872  Sum_probs=97.8

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      ++.|+.|.|.|++++.+||+++|||++....+.+........+........................+.+..|+++.+++
T Consensus         2 kl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (135)
T d1f9za_           2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDN   81 (135)
T ss_dssp             CEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSC
T ss_pred             cceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchHH
Confidence            57899999999999999999999999987766565555555555433322333333322233333456688999999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccccccc
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  374 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  374 (376)
                      ++++.++++++|+.+..+|...+.+..+++|++|||||.|||+|..+--+.
T Consensus        82 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~  132 (135)
T d1f9za_          82 AAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRG  132 (135)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC------
T ss_pred             HHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCcccc
Confidence            999999999999999998887777667899999999999999998864443

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.74  E-value=9.9e-18  Score=135.31  Aligned_cols=112  Identities=21%  Similarity=0.253  Sum_probs=89.5

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      +++|+||+|.|+|++++++||+++|||++..+.+      ..++++++...  +.+.+.+.       ...++.|++|.|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~--~~l~l~~~-------~~~~~~h~~f~v   66 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRA--WRIAVQQG-------EVDDLAFAGYEV   66 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBS--CSEEEEEC-------TTCEEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCc--eEEEEecC-------CCCCceEEEEEE
Confidence            4689999999999999999999999999987654      46778877553  34455443       235789999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecC--CCCeEEEEEEcCCCCEEEEeec
Q 017144          192 ED---VAKTVDLVKAKGGKVTREPGPVK--GGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       192 ~d---~d~~~~rl~~~G~~i~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .+   ++++.++|+++|+++...|....  .+..+.+||+|||||.||++..
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~  118 (131)
T d1lgta1          67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYG  118 (131)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeC
Confidence            75   67789999999999988775542  2456889999999999999854

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.74  E-value=1.4e-17  Score=136.91  Aligned_cols=120  Identities=23%  Similarity=0.283  Sum_probs=92.0

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      .+++|+||.|.|+|++++++||+++|||++..+.+      ...++.......++.+.+...       ...++.|++|.
T Consensus        13 ~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~~   79 (146)
T d1f1ua1          13 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAYR   79 (146)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC------Cceeeecccccccceeecccc-------CCCCCceeeEe
Confidence            36799999999999999999999999999987654      233444333333333333332       23578999999


Q ss_pred             eC---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCC
Q 017144          191 VE---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPE  243 (376)
Q Consensus       191 V~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  243 (376)
                      +.   |++++.++|+++|+++...|.....+.++.+||+|||||.|||........
T Consensus        80 ~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~~~  135 (146)
T d1f1ua1          80 VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVE  135 (146)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEeccccC
Confidence            97   478889999999999988777776667789999999999999997554433

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.74  E-value=2.3e-17  Score=139.29  Aligned_cols=121  Identities=21%  Similarity=0.211  Sum_probs=86.5

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      .+++|+||+|.|+|++++++||+++|||++..+.+    . ...|...+...... +.+.............+++||+|.
T Consensus         9 ~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~HiAf~   82 (170)
T d1zswa2           9 QIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q-EAIFQSIKGEAFGE-IVVKYLDGPTEKPGRGSIHHLAIR   82 (170)
T ss_dssp             SCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S-EEEEESSTTCSTTC-EEEEECCSSBCBCCBTCEEEEEEE
T ss_pred             HhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----c-eEEEEeccCccceE-EEeccccccccccCccccceEEEE
Confidence            45699999999999999999999999999987653    1 23344333332222 222222222222233578999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          191 VED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       191 V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      |+|   ++++.+++.+.|+++. ++.++  +..+++||+|||||.|||+...|
T Consensus        83 V~~~~~l~~~~~~l~~~G~~~~-~~~~~--~~~~s~Yf~DPdG~~iEl~t~~p  132 (170)
T d1zswa2          83 VKNDAELAYWEEQVKQRGFHSS-GIIDR--FYFKSLYFRESNGILFEIATDGP  132 (170)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCCC-CCEEC--SSEEEEEEECTTCCEEEEEEEEE
T ss_pred             eCChHHHHHHHHHHHhcCCCcc-ccccC--CCEEEEEEECCCCcEEEEEECCC
Confidence            987   6688889999999875 33444  35789999999999999997543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.73  E-value=1.9e-17  Score=133.80  Aligned_cols=113  Identities=16%  Similarity=0.205  Sum_probs=89.3

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      +.+|+||+|.|+|++++++||+++|||++..+.+      ..+|++++...  +.+.+...       ...++.|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~--~~l~~~~~-------~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRA--WRIAVQPG-------ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBS--CSEEEEEC-------TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecc--eeeeeecc-------CCCCceEEEEEe
Confidence            4689999999999999999999999999987764      46788876553  33444432       235789999999


Q ss_pred             CC---HHHHHHHHHHcCCeeecCCeecCC--CCeEEEEEEcCCCCEEEEeecC
Q 017144          192 ED---VAKTVDLVKAKGGKVTREPGPVKG--GNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       192 ~d---~d~~~~rl~~~G~~i~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      ++   ++++.++++++|+++...|.....  +....+||+||+||.|||+...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            75   678899999999999877655432  3457889999999999998553

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.73  E-value=4e-17  Score=131.11  Aligned_cols=119  Identities=16%  Similarity=0.230  Sum_probs=87.1

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC-ceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-RYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      |+.+|+||+|.|+|++++++||+++|||++..+.+.... .....++..+.    ..+.+......    ...+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEKL----AERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCCC----SSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeecccccc----cccceeeeee
Confidence            567899999999999999999999999999877643322 23445555542    34555443222    2356789999


Q ss_pred             EeC--CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          190 AVE--DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       190 ~V~--d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .|+  |+++++++++++|+++..++.... ++++.+||+|||||.|||...
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~-~~~~~~~~~DPdGn~iEl~~~  122 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVE-GEGRSIYFYDDDNHMFELHTG  122 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccC-CCEEEEEEECCCCCEEEEEEC
Confidence            775  699999999999999876654443 456789999999999999753

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.72  E-value=3.9e-17  Score=133.17  Aligned_cols=130  Identities=18%  Similarity=0.289  Sum_probs=93.7

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEee--CCCCceEEEEEEecCCCCC--------C
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGY--GPEDSHFVVELTYNYGVDK--------Y  178 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~--g~~~~~~~l~l~~~~~~~~--------~  178 (376)
                      +.|.++|+||+|.|+|++++++||+++||+++......+.......+...  ........+++.+......        .
T Consensus         2 ~~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~   81 (145)
T d1jc4a_           2 EDLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKH   81 (145)
T ss_dssp             CCCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHT
T ss_pred             cccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCccccccccc
Confidence            45678999999999999999999999999999877665554433333321  1122345667766432211        1


Q ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEE--EcCCCCEEEEeec
Q 017144          179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFI--EDPDGYKFELLER  238 (376)
Q Consensus       179 ~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~  238 (376)
                      ....|++|+||.|+|+++++++|+++|+++..++.....++.+.+|+  +||+|+.|||+|.
T Consensus        82 ~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~  143 (145)
T d1jc4a_          82 NGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQY  143 (145)
T ss_dssp             TTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEEC
T ss_pred             CCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEEC
Confidence            23568999999999999999999999999865543333334555555  6999999999985

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.72  E-value=2.5e-17  Score=128.81  Aligned_cols=108  Identities=20%  Similarity=0.280  Sum_probs=81.1

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      ++|+||+|.|+|++++++||+++|||++..+.+.     ..+++. ++.  ++.+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~-~~~--~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMR-DND--GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEE-CTT--CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeee-ecc--eeeeeeeeeecc----cccccceeeeeec
Confidence            5899999999999999999999999999876531     233443 333  345555554322    2357789999999


Q ss_pred             C---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          193 D---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       193 d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      |   ++++.++++++|+++..+|.    +.++.+||+|||||.|||.
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~----~~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKH----AHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEE----C-CEEEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCC----CceEEEEEECCCCCEEEEE
Confidence            7   66788899999999765432    2467899999999999985

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.2e-16  Score=135.23  Aligned_cols=126  Identities=33%  Similarity=0.543  Sum_probs=93.9

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCC-----------------ceEEEEEEecC--
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPED-----------------SHFVVELTYNY--  173 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~-----------------~~~~l~l~~~~--  173 (376)
                      .+++|++|.|+|+++|++||+++|||++......+......++...+...                 ....+......  
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  101 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccc
Confidence            37999999999999999999999999998888777766666666543321                 11112222211  


Q ss_pred             -CCCC----CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          174 -GVDK----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       174 -~~~~----~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                       ....    .....|+.|+++.++|+++++++|+++|+++..+|....  ....+||+||||+.|||+|+..
T Consensus       102 ~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~--~~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         102 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGK--MKGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             CTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSS--STTCEEEECTTCCEEEEECTTT
T ss_pred             ccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCC--ceEEEEEECCCCCEEEEEeCCC
Confidence             1111    112358899999999999999999999999998876543  3456789999999999998764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.70  E-value=2.8e-16  Score=133.26  Aligned_cols=119  Identities=20%  Similarity=0.233  Sum_probs=93.5

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      +++|+||+|.|+|++++++|| ++|||+++++...+++....+|+..+..  ++.+.+...       ...+++|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~--~~~l~~~~~-------~~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc--ccceecccc-------cCCCccceeEEe
Confidence            458999999999999999999 6799999988776666666777776654  334445443       235789999999


Q ss_pred             CCHH---HHHHHHHHcCCe--eecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          192 EDVA---KTVDLVKAKGGK--VTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       192 ~d~d---~~~~rl~~~G~~--i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      .+++   ++.++|+++|+.  +...|.++..+...++||+|||||.||+.....
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          73 HEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             SSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             ccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            9755   556688899985  456677777778889999999999999987543

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.69  E-value=1.6e-16  Score=130.28  Aligned_cols=123  Identities=17%  Similarity=0.243  Sum_probs=91.5

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecC-----------CCCCeEEEEeecCCCCCceEEEEcc---cCCCccc
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN-----------PDYKYTIAVMGYGPEDKNAVLELTY---NHGVTEY  308 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~l~l~~---~~~~~~~  308 (376)
                      .++.|++|.|+|++++.+||++ |||++..+...           .+....+.++.....  ...++|.+   ..+....
T Consensus         8 ~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~~   84 (149)
T d1ss4a_           8 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIADH   84 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCBC
T ss_pred             CEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeeccc--ceEEEEEeeccccCcccc
Confidence            3689999999999999999998 99998765422           233455666664332  34444432   1111111


Q ss_pred             ----cCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          309 ----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       309 ----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                          ....|.+|++|.|+|+++++++|+++|+++..+|...+++ .+.+|++||||+.|||+|+.
T Consensus        85 ~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~-~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_          85 RTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS-YRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTT-EEEEEEECGGGCEEEEEEEC
T ss_pred             cccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCC-eEEEEEECCCCCEEEEEEcc
Confidence                2235889999999999999999999999999888765553 57899999999999999975

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.69  E-value=2.6e-16  Score=128.01  Aligned_cols=115  Identities=23%  Similarity=0.352  Sum_probs=85.9

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      |+++|+||+|.|+|++++++||+++|||++..+.+      ...++..+..  +..+.+...... ......+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~------~~~~~~~~~~--~~~l~~~~~~~~-~~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDL--WVCLSYDEARQY-VPPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET------TEEEEEETTE--EEEEEECTTCCC-CCGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEec------cccccccccc--cceeeccccccc-CCCcCCccceeeee
Confidence            56799999999999999999999999999987654      2345555533  334444332222 22234567888888


Q ss_pred             e--CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          191 V--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       191 V--~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +  +|+++++++|+++|+++...|.    +.++.+||+|||||.|||...
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC----SSSEEEEEECTTCCEEEEEEC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCC----CCceEEEEECCCCCEEEEEEC
Confidence            8  4799999999999999875542    356889999999999999753

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.69  E-value=1.8e-16  Score=128.64  Aligned_cols=123  Identities=21%  Similarity=0.289  Sum_probs=90.8

Q ss_pred             eeEEEEEE----eCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          114 RMLHVVYR----VGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       114 ~i~Hv~l~----v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      +|.|+.++    |+|++++++||+++|||++..+...+. .+..+++..+..  .+.+.+....+......+.+.+|++|
T Consensus         5 ~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~hlaf   81 (137)
T d1twua_           5 SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVF   81 (137)
T ss_dssp             SCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEE
T ss_pred             CCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCC--ceeeecccccccccccccccCceEEE
Confidence            44555454    589999999999999999987664333 345667765544  45566666655555445567889999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          190 AVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       190 ~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      .|+|   +++++++|+++|+++..++.+..  +.+.+||+||||++|||+.....
T Consensus        82 ~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~--~~~~~~f~DPDG~~Iel~~~~~~  134 (137)
T d1twua_          82 YVPNAVELAAITSKLKHMGYQEVESENPYW--SNGGVTIEDPDGWRIVFMNSKGI  134 (137)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCCEECCSSHHH--HSSEEEEECTTCCEEEEESSCCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEeCCCCCCC--CceEEEEECCCCCEEEEEcCCCC
Confidence            9887   77888899999999887655433  44678999999999999976543

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.68  E-value=1e-16  Score=126.22  Aligned_cols=113  Identities=19%  Similarity=0.150  Sum_probs=87.3

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      .+.|+.|.|+|++++++||+++||+++....+    ++..  +..+    ...+.+...........+.+ .+++|.|+|
T Consensus         2 ~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~~--~~~g----~~~l~l~~~~~~~~~~~~~~-~~~~f~v~D   70 (115)
T d2i7ra1           2 NLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQ--FTIG----SHCLMLSQNHLVPLENFQSG-IIIHIEVED   70 (115)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEE--EEET----TEEEEEESSCSSSCCCCCSC-EEEEEECSC
T ss_pred             cceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeEE--EEEc----CceeeeeecccCCCCCCCcc-eEEEEEECC
Confidence            36899999999999999999999999865432    2433  3332    35555655433322223333 589999999


Q ss_pred             HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          324 VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       324 l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +++++++++++|+++..+|...|++ .+.+|++|||||.|||.+.
T Consensus        71 ~d~~~~~l~~~G~~i~~~~~~~~~g-~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          71 VDQNYKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEECTTS-CEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHHHHHhhccccccceEEeeCC-eEEEEEECCCCCEEEEEEe
Confidence            9999999999999999999888865 4889999999999999874

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.68  E-value=1.9e-16  Score=131.65  Aligned_cols=118  Identities=24%  Similarity=0.278  Sum_probs=89.1

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecC---CCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEE
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIP---EDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFG  188 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~---~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~  188 (376)
                      ..+|+||+|.|+|++++++||+++|||++++....+   .......|+.++...  +.+.....+      ...+++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~a~~~~~------~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRH--HTIALAAFP------IPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBS--CSEEEECCS------CSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeecccc--ceeeeccCC------CCCceeEEE
Confidence            358999999999999999999999999998764322   223345677766543  334444321      235899999


Q ss_pred             EEeCCHH---HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCC-EEEEeec
Q 017144          189 IAVEDVA---KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGY-KFELLER  238 (376)
Q Consensus       189 f~V~d~d---~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~  238 (376)
                      |+|+|.+   +++++|+++|+.+ ..|.++..+...++|++||+|+ .+|+...
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EECCCHHHHHHHHHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            9998755   5678999999865 5678887777899999999998 5898754

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.68  E-value=1.9e-16  Score=129.56  Aligned_cols=116  Identities=24%  Similarity=0.275  Sum_probs=84.5

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEe
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAV  191 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V  191 (376)
                      +++|+||.|.|+|++++++||+++|||++..+...     ...+........++...+...       ...+..|+++.+
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~   72 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ-----GRVYLKAWTEVDKFSLVLREA-------DEPGMDFMGFKV   72 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT-----SCEEEECTTCCBSCSEEEEEC-------SSCEEEEEEEEE
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeecc-----Cccceecccccceeecccccc-------Ccccceeeeeee
Confidence            67999999999999999999999999999876431     122333333322333334332       123556666665


Q ss_pred             C---CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          192 E---DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       192 ~---d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .   |++++.++|+++|+++...|.....+.++.+||+|||||.|||+...
T Consensus        73 ~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~  123 (145)
T d1mpya1          73 VDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADK  123 (145)
T ss_dssp             SCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCB
T ss_pred             hhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEec
Confidence            4   68899999999999988777665555678999999999999999644

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.68  E-value=5.9e-16  Score=124.40  Aligned_cols=122  Identities=55%  Similarity=0.916  Sum_probs=89.8

Q ss_pred             eeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeC
Q 017144          113 RRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVE  192 (376)
Q Consensus       113 ~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~  192 (376)
                      +||.||+|.|+|++++++||+++|||++..+...........+...........................+..++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            48999999999999999999999999998877655544444444444333222222222222333334556778999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          193 DVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       193 d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      +++++.+++...++++..+     +++.+++||+|||||.|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeC-----CCCcEEEEEECCCCCEEEEEECC
Confidence            9999999999999887644     23567899999999999999754

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.67  E-value=3.7e-16  Score=130.57  Aligned_cols=119  Identities=11%  Similarity=0.133  Sum_probs=92.5

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      -+++||.|.|+|++++++||+++|||++.++...+.......+...+.... ... +..      ....++..|++|.+.
T Consensus         4 ~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~------~~~~~~~~h~~~~~~   75 (162)
T d1mpya2           4 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAH-DVA-FIH------HPEKGRLHHVSFHLE   75 (162)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSC-SEE-EEE------CSSSSEEEEEEEECS
T ss_pred             ccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccc-ccc-ccc------cCCCCccceeEEEEe
Confidence            468999999999999999999999999988776666666555555433221 111 111      123467899999998


Q ss_pred             CHH---HHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 DVY---KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 Dl~---~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +++   ++.++|++.|+++..+|.++..+..+++||+|||||.|||+...
T Consensus        76 ~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~  125 (162)
T d1mpya2          76 TWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  125 (162)
T ss_dssp             CHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             eehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECC
Confidence            655   67899999999999988888766668999999999999998764

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.67  E-value=5.3e-16  Score=125.18  Aligned_cols=111  Identities=23%  Similarity=0.355  Sum_probs=81.2

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIA  190 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~  190 (376)
                      |+.+|+||+|.|+|++++++||+++||+++..+.+      ...++..+..    .+........  .....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSL----WLCLSREPQY--GGPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEEETTE----EEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEecc------ceeeeecCCe----EEEEeeeccc--cccccccccchhc
Confidence            56799999999999999999999999999987764      3445555532    2333322211  1123455677666


Q ss_pred             e--CCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          191 V--EDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       191 V--~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      +  +|+++++++|+++|+++...+    .+.++.+||+|||||.|||..
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~----~~~~~~~~f~DPdGn~iEl~~  113 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQN----RSEGDSFYFLDPDGHRLEAHV  113 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECC----CSSSCEEEEECTTCCEEEEES
T ss_pred             cccchHHHHHHHHHHCCCcCccCC----CcceeEEEEECCCCCEEEEEE
Confidence            5  589999999999999986542    234678999999999999974

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=4.1e-16  Score=131.89  Aligned_cols=125  Identities=27%  Similarity=0.499  Sum_probs=93.3

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCC---------------CceEEE--EcccC---
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPED---------------KNAVLE--LTYNH---  303 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~l~--l~~~~---  303 (376)
                      .+.|+.|.|+|++++++||+++|||++......+..+..+.+...+...               ......  .....   
T Consensus        23 ~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (176)
T d1qipa_          23 LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDD  102 (176)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGGC
T ss_pred             EEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeeccccc
Confidence            4899999999999999999999999998777666666777776643321               011111  11111   


Q ss_pred             CCccc----cCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          304 GVTEY----DKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       304 ~~~~~----~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      .....    ....++.|+++.|+|++++.++|+++|+++..+|...++  .+++|++|||||.|||+|+.+
T Consensus       103 ~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         103 ETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             TTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTT
T ss_pred             cCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCC
Confidence            00011    123488999999999999999999999999998865444  467899999999999999986

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.66  E-value=5.7e-16  Score=126.54  Aligned_cols=125  Identities=14%  Similarity=0.115  Sum_probs=89.9

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCC-CCeEEEEeecCCCCCceEEEEcccCCCccccCC-CceeEEEEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-YKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKG-NGYAQIAIG  320 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g-~g~~hiaf~  320 (376)
                      ..|+||+|.|+|++++.+||+++|||++.......+ ......+++.........+.+.......+...+ .+++|++|.
T Consensus         5 ~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~   84 (144)
T d1zswa1           5 KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLL   84 (144)
T ss_dssp             CSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEE
T ss_pred             cceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEe
Confidence            468999999999999999999999999986653322 223333444433334455555543333222333 468999999


Q ss_pred             eCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          321 TDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       321 V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      |+|   ++++.+++++.|+.+. ++..+.+  .+.+||+|||||.|||++..+
T Consensus        85 v~~~~~l~~~~~~l~~~gv~~~-~~~~~~~--~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          85 VPSEDSLHYWKERFEKFDVKHS-EMTTYAN--RPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             ESCHHHHHHHHHHHHHTTCEEC-CSEEETT--EEEEEEECTTCCEEEEEECTT
T ss_pred             cCCchhHHHHhhhhhccceeee-CccccCC--eEEEEEECCCCCEEEEEEeCC
Confidence            988   6778899999999874 4444444  578999999999999998864

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.66  E-value=1.9e-16  Score=128.56  Aligned_cols=122  Identities=19%  Similarity=0.312  Sum_probs=91.7

Q ss_pred             Ccccccccc----CChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEE
Q 017144          244 PLCQVMLRV----GDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  319 (376)
Q Consensus       244 ~~~~v~L~v----~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf  319 (376)
                      .+.|+.++|    .|++++.+||+++|||++..+...+. .+.++++....  ....+.+....+......+...+|++|
T Consensus         5 ~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hlaf   81 (137)
T d1twua_           5 SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVF   81 (137)
T ss_dssp             SCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEE
T ss_pred             CCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceEEE
Confidence            467777776    69999999999999999987654443 36666666433  346666666555544445567789999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          320 GTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       320 ~V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      .|+|   +++++++|+++|++++.++.  +.+..+.+||+||||++|||+++..
T Consensus        82 ~v~~~~dv~~~~~~l~~~G~~~~~~~~--~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          82 YVPNAVELAAITSKLKHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCCEECCSS--HHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEeCCCC--CCCCceEEEEECCCCCEEEEEcCCC
Confidence            9876   78899999999999987654  3333578999999999999998764

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.8e-16  Score=129.35  Aligned_cols=131  Identities=18%  Similarity=0.207  Sum_probs=94.7

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC-------CCCCCCc
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-------YDIGTGF  184 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-------~~~~~g~  184 (376)
                      ..+|+||+|.|+|++++++||+++|||++..+...+.......++.+...  ...+++........       ...+.|+
T Consensus         9 ~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           9 FLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG--KIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET--TEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             eeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC--cEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            45899999999999999999999999999877654443322233222222  22444443222111       1246799


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCe--EEEEEEcCCCCEEEEeecCCCCCC
Q 017144          185 GHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNT--VIAFIEDPDGYKFELLERGPTPEP  244 (376)
Q Consensus       185 ~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~--~~~~~~DPdG~~iel~~~~~~~~~  244 (376)
                      .|+||.|+|+++++++|+++|+++..+|.....+++  +++++++|+|..++|+|+....++
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g~  148 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR  148 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSS
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcCC
Confidence            999999999999999999999999888876644333  567888999999999998765443

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.65  E-value=5.2e-16  Score=126.36  Aligned_cols=127  Identities=15%  Similarity=0.179  Sum_probs=91.7

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeec--CCCCCceEEEEcccCCCcc--------ccCCC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGY--GPEDKNAVLELTYNHGVTE--------YDKGN  312 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~l~l~~~~~~~~--------~~~g~  312 (376)
                      .+|+|+.|.|+|++++++||+++||+++......+..+........  ........+++........        .....
T Consensus         6 ~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~   85 (145)
T d1jc4a_           6 ICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRA   85 (145)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCC
T ss_pred             eEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCC
Confidence            4689999999999999999999999999876655554444433332  1123456677765432221        12456


Q ss_pred             ceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEE--ECCCCCeEEEEecc
Q 017144          313 GYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITAC--LDPDGWKSVFVDNL  369 (376)
Q Consensus       313 g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~--~DPdG~~iel~~~~  369 (376)
                      |++|++|.|+|+++++++|+++|++++.++.....++.+++|+  +||+|+.|||+|.+
T Consensus        86 g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          86 GLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             cceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            8999999999999999999999999986643332222345555  79999999999975

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.64  E-value=4.9e-16  Score=129.92  Aligned_cols=129  Identities=21%  Similarity=0.273  Sum_probs=96.3

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC--ceEEEEEeeCCCCceEEEEEEecCCCCC----------C
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED--RYTNAFLGYGPEDSHFVVELTYNYGVDK----------Y  178 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~--~~~~~~l~~g~~~~~~~l~l~~~~~~~~----------~  178 (376)
                      ++.+|+||+|.|.|++++++||+++|||++......+..  ....+.++.+    ...+++........          .
T Consensus         4 ~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~   79 (163)
T d1t47a1           4 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVA   79 (163)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhh
Confidence            356899999999999999999999999999876644332  2234445443    23455554322111          1


Q ss_pred             CCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCC--eEEEEEEcCCCCEEEEeecCCCCC
Q 017144          179 DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGN--TVIAFIEDPDGYKFELLERGPTPE  243 (376)
Q Consensus       179 ~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  243 (376)
                      ..+.|+.||||.|+|+++++++|+++|+++..+|....++.  -+.+++++|+|..++|+|+....+
T Consensus        80 ~~g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~g  146 (163)
T d1t47a1          80 EHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDG  146 (163)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECS
T ss_pred             cCCCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCCC
Confidence            14679999999999999999999999999988887765433  357789999999999998765433

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.64  E-value=7e-16  Score=119.82  Aligned_cols=109  Identities=17%  Similarity=0.197  Sum_probs=80.1

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d  193 (376)
                      ++ +..|.|+|++++++||+++|||++..+.+     .. ..+..+..  ...+.......    ..+.+..|++|.++|
T Consensus         3 ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~-----~~-~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~d   69 (111)
T d2pjsa1           3 RV-VANIATPEPARAQAFYGDILGMPVAMDHG-----WI-VTHASPLE--AHAQVSFAREG----GSGTDVPDLSIEVDN   69 (111)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEECS-----SE-EEEEEEEE--EEEEEEEESSS----BTTBCCCSEEEEESC
T ss_pred             EE-EEEEEeCCHHHHHHHHHHhhCCceeeccc-----ce-eEeccccc--cceeeeccccc----CCCCceeEEEEEecC
Confidence            45 68899999999999999999999876543     12 22222211  11111111111    123455689999999


Q ss_pred             HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEe
Q 017144          194 VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELL  236 (376)
Q Consensus       194 ~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~  236 (376)
                      +++++++++++|+++..+|...++ +.+.+|++|||||.||++
T Consensus        70 vd~~~~~l~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          70 FDEVHARILKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            999999999999999888888876 567889999999999986

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.63  E-value=1.6e-15  Score=127.16  Aligned_cols=132  Identities=19%  Similarity=0.265  Sum_probs=96.3

Q ss_pred             cccceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCC------------C
Q 017144          109 KSDKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGV------------D  176 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~------------~  176 (376)
                      ...+.+++||+|.|+|++++++||+++|||++..+...+...........+.....+.+........            .
T Consensus         7 ~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   86 (167)
T d1sqda1           7 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   86 (167)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccccccc
Confidence            3456799999999999999999999999999988765544332333333323322333322211000            0


Q ss_pred             C-C----------CCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          177 K-Y----------DIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       177 ~-~----------~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                      + .          .++.|+.||||.|+|+++++++|+++|+++..+|....+ +.+.++++++++..++|+++...
T Consensus        87 ~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~~  161 (167)
T d1sqda1          87 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  161 (167)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCCC
Confidence            0 0          024689999999999999999999999999999988764 67888999999999999998754

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.61  E-value=1.6e-15  Score=121.25  Aligned_cols=118  Identities=18%  Similarity=0.171  Sum_probs=83.0

Q ss_pred             eeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEec------CCCCCCCCCCCceEE
Q 017144          114 RMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYN------YGVDKYDIGTGFGHF  187 (376)
Q Consensus       114 ~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~------~~~~~~~~~~g~~hi  187 (376)
                      +|+||+|.|+|++++++||++ |||.+.......    ..+.+..+.   ...+.+...      ........+.+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSA----PHTEAVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGC----SEEEEECGG---GCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCccccccccc----cceeeeccc---eeeeeecccccccccCCCCCCCccccceeE
Confidence            799999999999999999977 899875443322    123333222   122333221      111111223456799


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCC
Q 017144          188 GIAVED---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGP  240 (376)
Q Consensus       188 ~f~V~d---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  240 (376)
                      +|.|+|   +++++++++++|+++..+|...++ +.+.+||+|||||.|||.++-|
T Consensus        74 ~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p~p  128 (128)
T d1klla_          74 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLP  128 (128)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEECC
T ss_pred             eeeeccchhhHHHHHHHHhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEecCC
Confidence            999987   667899999999999988887765 5788999999999999997653

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.60  E-value=5e-15  Score=124.63  Aligned_cols=117  Identities=18%  Similarity=0.116  Sum_probs=82.9

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      ..++||+|.|+|++++.+||+++|||++..+.+    .........+.  ....+.+.............+++|++|.|+
T Consensus        11 ~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~HiAf~V~   84 (170)
T d1zswa2          11 QGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGE--AFGEIVVKYLDGPTEKPGRGSIHHLAIRVK   84 (170)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTC--STTCEEEEECCSSBCBCCBTCEEEEEEEES
T ss_pred             CCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCc--cceEEEeccccccccccCccccceEEEEeC
Confidence            458999999999999999999999999986532    23333333222  222233333222222223347899999997


Q ss_pred             C---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          323 D---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       323 D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      |   ++++.+++++.|+++. ++.++.+  .+.+||+|||||.|||+..
T Consensus        85 ~~~~l~~~~~~l~~~G~~~~-~~~~~~~--~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          85 NDAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             SHHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEE
T ss_pred             ChHHHHHHHHHHHhcCCCcc-ccccCCC--EEEEEEECCCCcEEEEEEC
Confidence            6   7788999999999874 4444444  5789999999999999875

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.60  E-value=4.5e-15  Score=119.10  Aligned_cols=125  Identities=40%  Similarity=0.715  Sum_probs=91.8

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .++.|+.|.|.|++++++||+++|||++......+..........................+......+....++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            46899999999999999999999999998776555555555555433322222222222222223344567789999999


Q ss_pred             CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccccc
Q 017144          323 DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFL  372 (376)
Q Consensus       323 Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~  372 (376)
                      ++.+.+++++..++++..++.     ..+++||+|||||+|||++..+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~  126 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMM  126 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHHHH
T ss_pred             hHHHHHHHHHHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCCCC
Confidence            999999999999998876542     247899999999999999976543

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.60  E-value=5.2e-15  Score=124.77  Aligned_cols=130  Identities=17%  Similarity=0.159  Sum_probs=95.1

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC-------------
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-------------  177 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-------------  177 (376)
                      .+++++||+|.|+|++++++||+++|||++..+...............+.....+.+..........             
T Consensus        10 ~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (172)
T d1sp8a1          10 HTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAAA   89 (172)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             CcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcchh
Confidence            4569999999999999999999999999998776544432222222222222233332222111100             


Q ss_pred             ----CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCC
Q 017144          178 ----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPT  241 (376)
Q Consensus       178 ----~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  241 (376)
                          ...+.|+.||||.|+|+++++++++++|+++..+|....+ +.+.++++.|.+..++|++....
T Consensus        90 ~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~  156 (172)
T d1sp8a1          90 RRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDG  156 (172)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTT
T ss_pred             hhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCC
Confidence                0135799999999999999999999999999999988765 57888899999999999998764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.59  E-value=4.2e-15  Score=125.84  Aligned_cols=118  Identities=19%  Similarity=0.150  Sum_probs=91.3

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .+|+|++|.|+|++++++|| ++|||+++++...+.+.....++..+..  +..+.+..       ...++.+|++|.+.
T Consensus         4 ~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~--~~~l~~~~-------~~~~~~~H~~f~~~   73 (176)
T d1f1ua2           4 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTG-------GNGPRMHHVAFATH   73 (176)
T ss_dssp             CEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEECS
T ss_pred             eEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc--ccceeccc-------ccCCCccceeEEec
Confidence            46899999999999999999 6899999987777766666777775432  33343332       12468899999997


Q ss_pred             C---HHHHHHHHHHcCCe--eecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          323 D---VYKTAEAIKLSGGK--ITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       323 D---l~~~~~~l~~~G~~--~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      +   +.++.++|+++|+.  ..++|+++..+...++||+|||||+|||....+
T Consensus        74 ~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          74 EKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             SHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             cchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            5   55677899999985  457788887766789999999999999977543

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.5e-15  Score=123.53  Aligned_cols=127  Identities=21%  Similarity=0.259  Sum_probs=94.3

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCC--CeEEEEeecCCCCCceEEEEcccCCCc--c-----ccCCCce
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTYNHGVT--E-----YDKGNGY  314 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~l~~~~~~~--~-----~~~g~g~  314 (376)
                      .++||+|.|.|++++++||+++|||++......+..  ......+..+    ...++|.......  .     ...+.|+
T Consensus        11 ~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1          11 HFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQG----KIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             eEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCC----cEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            479999999999999999999999999766543322  2333334422    3455554322211  1     1357899


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeeecCCccC--CCCCceEEEEECCCCCeEEEEeccccccc
Q 017144          315 AQIAIGTDDVYKTAEAIKLSGGKITREPGPL--PGINTKITACLDPDGWKSVFVDNLDFLKE  374 (376)
Q Consensus       315 ~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~--~~~~~~~~~~~DPdG~~iel~~~~~~~~~  374 (376)
                      +|++|.|+|+++++++|+++|++++.+|...  .+|..++++++.|+|..++|+|+.++..+
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g~  148 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR  148 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSS
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcCC
Confidence            9999999999999999999999999988654  23333678899999999999999876543

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.57  E-value=5.6e-15  Score=121.02  Aligned_cols=114  Identities=18%  Similarity=0.157  Sum_probs=85.7

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .+++|+.|.|.|++++++||+++|||++......    . ..+... .......+.+..       ...+++.|++|.+.
T Consensus        15 ~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~----~-~~~~~~-~~~~~~~~~~~~-------~~~~~~~h~~~~~~   81 (146)
T d1f1ua1          15 VRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN----T-IYLRSL-EEFIHHNLVLRQ-------GPIAAVAAFAYRVK   81 (146)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS----E-EEEECT-TCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             cEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC----c-eeeecc-cccccceeeccc-------cCCCCCceeeEeec
Confidence            4589999999999999999999999999865321    2 222222 222222222221       23468899999995


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          323 ---DVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 ---Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                         |++++.++|+++|+++...+.....+.++.+||+|||||.|||....
T Consensus        82 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~  131 (146)
T d1f1ua1          82 SPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYET  131 (146)
T ss_dssp             SHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             cchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEec
Confidence               68899999999999999888777665568899999999999998754

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.56  E-value=1.1e-14  Score=120.74  Aligned_cols=118  Identities=14%  Similarity=0.131  Sum_probs=85.8

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecC---CCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN---PDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAI  319 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf  319 (376)
                      ..|+|+.|.|+|++++.+||+++|||++.+....   ........++..+..  ++.+.+..      .+..++++|++|
T Consensus         9 ~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~------~~~~~gl~Hiaf   80 (156)
T d1kw3b2           9 QGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAA------FPIPKRIHHFML   80 (156)
T ss_dssp             GCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEEC------CSCSSSEEEEEE
T ss_pred             CCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeecc------CCCCCceeEEEE
Confidence            4699999999999999999999999999765422   122334445554332  22232222      123458999999


Q ss_pred             EeCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCC-eEEEEecc
Q 017144          320 GTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGW-KSVFVDNL  369 (376)
Q Consensus       320 ~V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~-~iel~~~~  369 (376)
                      +|+|   +.+++++|+++|+. +++|++|..+...++|++||+|+ .+|+.-..
T Consensus        81 ~v~~~ddv~~~~d~l~~~G~~-~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          81 QANTIDDVGYAFDRLDAAGRI-TSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EBSSHHHHHHHHHHHHHTTCB-CBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             ECCCHHHHHHHHHHHHhcCCc-eecCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            9965   55688999999986 46788887665689999999998 58986543

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.56  E-value=7.9e-15  Score=117.33  Aligned_cols=117  Identities=15%  Similarity=0.158  Sum_probs=81.9

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCC-CeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe-
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT-  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V-  321 (376)
                      .|+|++|.|+|++++++||+++|||++....+.... .....++..+    ...+.+....    .....+..|++|.| 
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~f~v~   75 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGE----KLAERSYNHIAFKID   75 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECC----CCSSCCSCEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeecccc----cccccceeeeeeccc
Confidence            488999999999999999999999999866543321 1222333322    2344443321    12345667899977 


Q ss_pred             -CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 -~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                       +|+++++++++++|+++..++....+ ..+.+||+|||||+|||....
T Consensus        76 ~~dv~~~~~~l~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          76 DADFDRYAERVGKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             GGGHHHHHHHHHHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHHHHHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEECC
Confidence             47999999999999998876543333 257899999999999997654

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.56  E-value=1e-14  Score=118.96  Aligned_cols=116  Identities=16%  Similarity=0.183  Sum_probs=82.1

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe--
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V--  321 (376)
                      +|+||.|.|+|++++.+||+++|||++..+....   .... .. ........+.+..       ...++..|+++.+  
T Consensus         7 rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~   74 (145)
T d1mpya1           7 RPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG---RVYL-KA-WTEVDKFSLVLRE-------ADEPGMDFMGFKVVD   74 (145)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS---CEEE-EC-TTCCBSCSEEEEE-------CSSCEEEEEEEEESC
T ss_pred             EeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC---ccce-ec-ccccceeeccccc-------cCcccceeeeeeehh
Confidence            5899999999999999999999999998653221   1111 11 1222222222222       1123455666665  


Q ss_pred             -CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecccc
Q 017144          322 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDF  371 (376)
Q Consensus       322 -~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~  371 (376)
                       +|+++++++|+++|+++.+.|.....+.++.+||+|||||.|||+...+.
T Consensus        75 ~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~  125 (145)
T d1mpya1          75 EDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEY  125 (145)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCB
T ss_pred             HHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEeccc
Confidence             57899999999999999888776655556899999999999999976543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.56  E-value=1.4e-14  Score=115.71  Aligned_cols=116  Identities=21%  Similarity=0.195  Sum_probs=82.4

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcc-----c-CCCccccCCCceeEE
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTY-----N-HGVTEYDKGNGYAQI  317 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~-----~-~~~~~~~~g~g~~hi  317 (376)
                      +|+|++|.|.|++++++||++ |||.+........  +......  .   ...+.+..     . ........+.+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP--HTEAVLD--G---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS--EEEEECG--G---GCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc--ceeeecc--c---eeeeeecccccccccCCCCCCCccccceeE
Confidence            689999999999999999976 8998876544332  3222222  1   22333321     0 011111223455799


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          318 AIGTDD---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       318 af~V~D---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +|.|+|   +++++++++++|++++.+|...++| .+.+|++|||||.|||.++
T Consensus        74 ~~~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G-~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          74 AFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWG-QRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             EEECSSHHHHHHHHHHHHHTTCEEEEEEEECTTS-EEEEEEECTTSCEEEEEEE
T ss_pred             eeeeccchhhHHHHHHHHhccCccccCCeEcCCC-cEEEEEECCCCCEEEEEec
Confidence            999976   6778999999999999998877765 5889999999999999875

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.55  E-value=7.7e-15  Score=113.75  Aligned_cols=107  Identities=15%  Similarity=0.067  Sum_probs=78.5

Q ss_pred             ccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHH
Q 017144          247 QVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYK  326 (376)
Q Consensus       247 ~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~  326 (376)
                      +..|.|.|++++.+||+++|||++....+    .+......  . . ...+......    ...+.+..|++|.|+|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~--~-~-~~~~~~~~~~----~~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASP--L-E-AHAQVSFARE----GGSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEE--E-E-EEEEEEEESS----SBTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ceeEeccc--c-c-cceeeecccc----cCCCCceeEEEEEecCHHH
Confidence            35689999999999999999999875432    12222221  1 1 1111111111    1234566789999999999


Q ss_pred             HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          327 TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       327 ~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      ++++++++|+++..+|...+.+ .+.+|++|||||.||++
T Consensus        73 ~~~~l~~~g~~~~~~p~~~~~g-~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHHHHTTCCCSEEEEECTTS-CEEEEEECTTSCEEEEE
T ss_pred             HHHHHHhhccccccCCeEcCCC-cEEEEEECCCCCEEEeC
Confidence            9999999999999999888765 48899999999999986

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.55  E-value=1.3e-14  Score=113.06  Aligned_cols=107  Identities=20%  Similarity=0.208  Sum_probs=77.9

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      +|+|+.|.|+|++++.+||+++|||++......   ..  +++..+   .+..+.+.....    ...++..|++|.|+|
T Consensus         3 ~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~~--~~~~~~---~~~~~~~~~~~~----~~~~~~~h~~f~v~~   70 (113)
T d1xqaa_           3 GIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN---AF--AVMRDN---DGFILTLMKGKE----VQYPKTFHVGFPQES   70 (113)
T ss_dssp             CCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT---TE--EEEECT---TCCEEEEEECSS----CCCCTTCCEEEECSS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC---cc--eeeeec---ceeeeeeeeeec----ccccccceeeeeecc
Confidence            589999999999999999999999999765432   12  233322   234454443222    223467899999986


Q ss_pred             ---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          324 ---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       324 ---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                         ++++.++++++|+++..+|  ...  .+.+|++|||||.|||+
T Consensus        71 ~~~v~~~~~~l~~~G~~~~~~~--~~~--~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          71 EEQVDKINQRLKEDGFLVEPPK--HAH--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCE--EC---CEEEEEEETTTEEEEEE
T ss_pred             ccchhhhhhhHHHcCCccccCC--CCc--eEEEEEECCCCCEEEEE
Confidence               6778999999999976543  332  47899999999999985

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.54  E-value=1.3e-14  Score=116.52  Aligned_cols=111  Identities=15%  Similarity=0.122  Sum_probs=83.5

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC-
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD-  322 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~-  322 (376)
                      .++|+.|.|+|++++++||+++|||++....+.      ..+++.+..  +..+.+..       ...+++.|++|.|. 
T Consensus         4 ~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~------~~~l~~~~~--~~~l~l~~-------~~~~~~~h~~f~v~~   68 (131)
T d1lgta1           4 SLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDN------GDLFRIDSR--AWRIAVQQ-------GEVDDLAFAGYEVAD   68 (131)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEESSSB--SCSEEEEE-------CTTCEEEEEEEEESS
T ss_pred             cccEEEEEeCCHHHHHHHHHHhhCCceeecCCc------ceEEeecCC--ceEEEEec-------CCCCCceEEEEEEcc
Confidence            489999999999999999999999999865321      234554332  33444432       12358899999995 


Q ss_pred             --CHHHHHHHHHHcCCeeecCCccCC--CCCceEEEEECCCCCeEEEEecc
Q 017144          323 --DVYKTAEAIKLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       323 --Dl~~~~~~l~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                        |++++.++|+++|+++.+.|....  .+..+.+||+|||||.|||+-..
T Consensus        69 ~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          69 AAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             HHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence              578899999999999998876432  12247899999999999997544

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=1.2e-14  Score=121.86  Aligned_cols=129  Identities=16%  Similarity=0.127  Sum_probs=90.4

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCC--eEEEEeecCCCCCceEEEEcccCC------------Ccc-
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYK--YTIAVMGYGPEDKNAVLELTYNHG------------VTE-  307 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~l~l~~~~~------------~~~-  307 (376)
                      .+++||++.|+|++++++||+++|||+...+...+...  .....++.+  +....+.......            ..+ 
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC--CeeEEEecccccccccccccccccccccc
Confidence            36899999999999999999999999987665433221  222222221  1111111110000            000 


Q ss_pred             ----------ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccccccc
Q 017144          308 ----------YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLDFLKE  374 (376)
Q Consensus       308 ----------~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~  374 (376)
                                ...++|+.|+||.|+|+++++++|+++|++++.+|...+++ .+++++..+++...+|+++.+...|
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~-~~~a~I~~~gd~~~~~v~r~~~~~~  164 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEA-VTIAEVKLYGDVVLRYVSYKAEDTE  164 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTT-EEEEEEEEETTEEEEEEEECCC---
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCC-EEEEEEEccCCcEEEEEecCCCccc
Confidence                      02357999999999999999999999999999999877664 5889999999999999999876544

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.51  E-value=1.3e-14  Score=121.07  Aligned_cols=126  Identities=21%  Similarity=0.264  Sum_probs=95.1

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCC--CCCeEEEEeecCCCCCceEEEEcccCCCc-c---------ccC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNP--DYKYTIAVMGYGPEDKNAVLELTYNHGVT-E---------YDK  310 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~l~l~~~~~~~-~---------~~~  310 (376)
                      .+++|+++.|.|++++++||+++|||++......+  ......+.++.+    ...++|....... .         ...
T Consensus         6 ~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~   81 (163)
T d1t47a1           6 KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAEH   81 (163)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHHH
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhhcC
Confidence            45899999999999999999999999998655332  223444555532    4556665533221 0         134


Q ss_pred             CCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCC--CCCceEEEEECCCCCeEEEEeccccc
Q 017144          311 GNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLP--GINTKITACLDPDGWKSVFVDNLDFL  372 (376)
Q Consensus       311 g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~--~~~~~~~~~~DPdG~~iel~~~~~~~  372 (376)
                      +.|++|++|.|+|+++++++|+++|++++.+|....  .|..+++++++|+|..++|+|+....
T Consensus        82 g~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~  145 (163)
T d1t47a1          82 GDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYD  145 (163)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEEC
T ss_pred             CCceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCC
Confidence            679999999999999999999999999999886543  22347889999999999999986543

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.51  E-value=2.1e-14  Score=115.50  Aligned_cols=113  Identities=16%  Similarity=0.122  Sum_probs=84.4

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeC
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTD  322 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~  322 (376)
                      .+|+||.|.|+|++++.+||+++|||++......      ..++..+..  +..+.+..       ...++..|++|.|.
T Consensus         3 ~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~~------~~~l~~~~~--~~~l~~~~-------~~~~~~~h~~f~v~   67 (132)
T d1kw3b1           3 ERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAGD------AALYRADQR--AWRIAVQP-------GELDDLAYAGLEVD   67 (132)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEESSSB--SCSEEEEE-------CTTCEEEEEEEECS
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHhCCceeccccc------eeeeeeeec--ceeeeeec-------cCCCCceEEEEEec
Confidence            4689999999999999999999999999765421      234554432  23333332       12468899999995


Q ss_pred             ---CHHHHHHHHHHcCCeeecCCccCCC--CCceEEEEECCCCCeEEEEeccc
Q 017144          323 ---DVYKTAEAIKLSGGKITREPGPLPG--INTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       323 ---Dl~~~~~~l~~~G~~~~~~p~~~~~--~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                         |++++.++++++|+++.+.+.....  +..+.+||+||+||.|||+-...
T Consensus        68 ~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~~  120 (132)
T d1kw3b1          68 DAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (132)
T ss_dssp             SHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             cHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECCC
Confidence               5788999999999999988764321  12468899999999999986553

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.50  E-value=8.3e-14  Score=111.94  Aligned_cols=109  Identities=23%  Similarity=0.295  Sum_probs=76.1

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe--
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT--  321 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V--  321 (376)
                      .|+||+|.|+|++++.+||+++||+++....+.    ...  +..+    ...+........  .....+..|++|.+  
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~----~~~--~~~~----~~~~~~~~~~~~--~~~~~~~~h~~~~~~~   71 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ----GAY--LELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----EEE--EEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc----eee--eecC----CeEEEEeeeccc--cccccccccchhcccc
Confidence            489999999999999999999999999765432    222  2222    223333222111  12233445666554  


Q ss_pred             CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          322 DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       322 ~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      +|+++++++|+++|+++..++  +.+  .+.+||+|||||.|||...
T Consensus        72 ~dl~~~~~~l~~~G~~~~~~~--~~~--~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          72 ADFARFAAQLRAHGVREWKQN--RSE--GDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHHHHTTCCEEECC--CSS--SCEEEEECTTCCEEEEESC
T ss_pred             chHHHHHHHHHHCCCcCccCC--Ccc--eeEEEEECCCCCEEEEEEC
Confidence            799999999999999986542  333  4779999999999999764

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.47  E-value=5.6e-14  Score=118.27  Aligned_cols=122  Identities=17%  Similarity=0.137  Sum_probs=89.7

Q ss_pred             CccccccccCChhHHHHHHHHhhCCEEeceecCCCC--CeEEEEeecCCCCCceEEEEcc--cCCCc------------c
Q 017144          244 PLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDY--KYTIAVMGYGPEDKNAVLELTY--NHGVT------------E  307 (376)
Q Consensus       244 ~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~l~l~~--~~~~~------------~  307 (376)
                      +++|++|.|.|++++++||+++|||++.........  ......++.+    ...+.+..  ..+..            .
T Consensus        13 ~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (172)
T d1sp8a1          13 AFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG----SLSFLFTAPYAHGADAATAALPSFSAAA   88 (172)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET----TEEEEEEEECCSSCCGGGCSSTTCCHHH
T ss_pred             EEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC----CeeeEEeeccCCCchhhhcccccCCcch
Confidence            689999999999999999999999999865443322  2222223322    12222211  11100            0


Q ss_pred             -----ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          308 -----YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       308 -----~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                           ...+.|+.|++|.|+|+++++++++++|+++..+|....++ .++++++.|.+..++|+++.+
T Consensus        89 ~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g-~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          89 ARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRG-FRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETT-EEEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCC-EEEEEEECCCCcEEEEEecCC
Confidence                 12467999999999999999999999999999998776654 588999999899999999985

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.47  E-value=1.4e-13  Score=111.49  Aligned_cols=114  Identities=18%  Similarity=0.271  Sum_probs=80.4

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe-
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT-  321 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V-  321 (376)
                      ..++|+.|.|+|++++.+||+++|||++......    ..  ++..++  ....+.+...... ......+..|++|.+ 
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~----~~--~~~~~~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~~~   73 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----GA--YLTCGD--LWVCLSYDEARQY-VPPQESDYTHYAFTVA   73 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT----EE--EEEETT--EEEEEEECTTCCC-CCGGGSCSCEEEEECC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc----cc--cccccc--ccceeeccccccc-CCCcCCccceeeeech
Confidence            3589999999999999999999999999755321    22  233222  1233333322221 122334667888887 


Q ss_pred             -CCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 -DDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 -~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                       +|++++.++|+++|+++...+.  .  .++.+||+|||||.|||....
T Consensus        74 ~~d~~~~~~~l~~~Gv~~~~~~~--~--~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          74 EEDFEPLSQRLEQAGVTIWKQNK--S--EGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             HHHHHHHHHHHHHTTCCEEECCC--S--SSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHCCCeEeecCC--C--CceEEEEECCCCCEEEEEECC
Confidence             6899999999999999876542  2  257899999999999997653

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.46  E-value=6.7e-13  Score=104.39  Aligned_cols=105  Identities=23%  Similarity=0.320  Sum_probs=74.7

Q ss_pred             EEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHHH
Q 017144          120 YRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVD  199 (376)
Q Consensus       120 l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~~~~  199 (376)
                      |.|+|+++|++||++ |||++....+      ..+++..+.    ..+.+.......+   .....++.+.++|++++++
T Consensus         8 l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~   73 (120)
T d1ecsa_           8 LPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGD----LMLEFFAHPGLDP---LASWFSCCLRLDDLAEFYR   73 (120)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEECS------SEEEEEETT----EEEEEEECTTCCG---GGCCCEEEEEESCHHHHHH
T ss_pred             EEeCCHHHHHHHHHH-cCCeeEEecC------ceeeeecce----ecccccccccccc---CCCCcEEEEEECCHHHHHH
Confidence            999999999999998 9999976543      233343332    2333443322211   1234578999999999999


Q ss_pred             HHHHcCCeeec-------CCeecCCCCeEEEEEEcCCCCEEEEeecC
Q 017144          200 LVKAKGGKVTR-------EPGPVKGGNTVIAFIEDPDGYKFELLERG  239 (376)
Q Consensus       200 rl~~~G~~i~~-------~p~~~~~~~~~~~~~~DPdG~~iel~~~~  239 (376)
                      .++++|+++..       +|...++ +.+.+||+|||||.|||+|..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          74 QCKSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred             HHhhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence            99999887643       3455554 567899999999999999863

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.45  E-value=5.5e-13  Score=104.94  Aligned_cols=105  Identities=12%  Similarity=0.018  Sum_probs=75.4

Q ss_pred             EEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHH
Q 017144          119 VYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTV  198 (376)
Q Consensus       119 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d~~~  198 (376)
                      .|.|+|++++++||+++|||++..+.+      ..+++..+.    ..+.+.......    .....++.+.+.|++++.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~----~~l~l~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGD----IRLHISRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETT----EEEEEEECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeee----eeeeeecccccc----ccceeEEEEeechhHHHH
Confidence            599999999999999999999876543      245555543    344555432221    124457899999999999


Q ss_pred             HHHHHcCCeeecCCe-------ecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          199 DLVKAKGGKVTREPG-------PVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       199 ~rl~~~G~~i~~~p~-------~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +++++++......+.       ... ++++.+|++|||||.|||...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGES-PAGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEE-TTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccC-CCeEEEEEECCCCCEEEEEeC
Confidence            999999866533221       112 357899999999999999754

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.38  E-value=2.1e-12  Score=101.50  Aligned_cols=104  Identities=23%  Similarity=0.320  Sum_probs=73.5

Q ss_pred             cccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHHHH
Q 017144          250 LRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTAE  329 (376)
Q Consensus       250 L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~~  329 (376)
                      |.|.|+++|.+||++ |||++.....    .+......      ...+.+......   .......++.+.|+|++++++
T Consensus         8 l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~d~~~~~~   73 (120)
T d1ecsa_           8 LPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRG------DLMLEFFAHPGL---DPLASWFSCCLRLDDLAEFYR   73 (120)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEET------TEEEEEEECTTC---CGGGCCCEEEEEESCHHHHHH
T ss_pred             EEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecc------eecccccccccc---ccCCCCcEEEEEECCHHHHHH
Confidence            889999999999987 9999975432    23222222      233333332221   122345689999999999999


Q ss_pred             HHHHcCCeeec-------CCccCCCCCceEEEEECCCCCeEEEEec
Q 017144          330 AIKLSGGKITR-------EPGPLPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       330 ~l~~~G~~~~~-------~p~~~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      .++++|+++..       +|...+.| .+.+||+|||||+|||+|.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~G-~r~~~~~DPDGn~iei~q~  118 (120)
T d1ecsa_          74 QCKSVGIQETSSGYPRIHAPELQGWG-GTMAALVDPDGTLLRLIQN  118 (120)
T ss_dssp             HHHHTTCCBCSSSSSEEEEEEECTTS-SEEEEEECTTSCEEEEEEC
T ss_pred             HHhhhhhhhccccccccccceecCCC-cEEEEEECCCCCEEEEEEc
Confidence            99999988654       34455554 4889999999999999986

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.37  E-value=7.2e-12  Score=97.81  Aligned_cols=106  Identities=13%  Similarity=0.043  Sum_probs=74.1

Q ss_pred             EEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCCHH
Q 017144          116 LHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVA  195 (376)
Q Consensus       116 ~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d~d  195 (376)
                      .+..|.|+|++++++||+++|||++..+.+      ...++..+.    ..+.+......    ...+..++.+.+.+++
T Consensus         6 ~~pvL~v~D~~~s~~FY~~~LG~~~~~~~~------~~~~~~~~~----~~l~~~~~~~~----~~~~~~~~~~~~~~~~   71 (120)
T d1xrka_           6 AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDD----VTLFISAVQDQ----VVPDNTQAWVWVRGLD   71 (120)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEECS------SEEEEEETT----EEEEEEECSCT----TTGGGCEEEEEEECHH
T ss_pred             EEEEEEECCHHHHHHHHHHhhCCeEEEECC------CeeEEeccc----ceeeccccccc----cCCCCceEEEeeccHH
Confidence            455699999999999999999999987654      234455443    23444443222    1234567889999999


Q ss_pred             HHHHHHHHcC--------CeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          196 KTVDLVKAKG--------GKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       196 ~~~~rl~~~G--------~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      .+...+.+.+        ..+..+|.+.+  .++.+||+|||||.|||+.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          72 ELYAEWSEVVSTNFRDASGPAMTEIVEQP--WGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHHTTTSBSCTTTCSSCEECCCEEET--TEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHhhhHHhhhcccccccCceecC--CEEEEEEECCCCCEEEEEE
Confidence            8887766553        33444555554  3579999999999999974

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.36  E-value=1.4e-12  Score=104.87  Aligned_cols=116  Identities=12%  Similarity=0.097  Sum_probs=77.9

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC-------ceEEEEEeeCCCCceEEEEEEecC---CCCCCCCCCCceE
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-------RYTNAFLGYGPEDSHFVVELTYNY---GVDKYDIGTGFGH  186 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-------~~~~~~l~~g~~~~~~~l~l~~~~---~~~~~~~~~g~~h  186 (376)
                      ++.+.|+|+++|++||+++||+++..+...+++       ....+.+.+++.    .+.+....   ............+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS----SFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE----EEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCe----eeeccccccccccccCCCCCcceE
Confidence            456677799999999999999998765433221       122344544432    22222211   1111112223358


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       187 i~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      +++.++|+++++.++.++|+++..+|.+.++ +.+.++|+||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKAVDAGAVKVEVTEAEVE-LGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHHHHTTCEECCCCHHHHH-TTEEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEeecccceEecCcccccc-cCEEEEEECCCCCEEEEeC
Confidence            9999999999999999999999999988876 4678899999999999975

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.32  E-value=3.8e-12  Score=102.21  Aligned_cols=115  Identities=15%  Similarity=0.167  Sum_probs=76.5

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCC-------CeEEEEeecCCCCCceEEEEcc---cCCCccccCCCceeEE
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDY-------KYTIAVMGYGPEDKNAVLELTY---NHGVTEYDKGNGYAQI  317 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~l~l~~---~~~~~~~~~g~g~~hi  317 (376)
                      +.+.+.|.++|++||+++||+++......++.       ......+..+    ...+.+..   ..+...........++
T Consensus        11 l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (135)
T d1xy7a_          11 LLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGSGVTF   86 (135)
T ss_dssp             EEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSCCCEE
T ss_pred             EEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC----CeeeeccccccccccccCCCCCcceEE
Confidence            45667899999999999999998765432221       1112223222    12222221   1111111222334589


Q ss_pred             EEEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          318 AIGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       318 af~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      ++.|+|+++++.++.++|++++.+|...+++ .+.++++||+|+.|+|.|
T Consensus        87 ~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          87 LLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL-GFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEECSCHHHHHHHHHHTTCEECCCCHHHHHT-TEEEEEECTTSCEEEEEC
T ss_pred             EEeecCcceeEEEeecccceEecCccccccc-CEEEEEECCCCCEEEEeC
Confidence            9999999999999999999999999888775 488999999999999976

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.26  E-value=1.6e-11  Score=96.22  Aligned_cols=105  Identities=14%  Similarity=0.090  Sum_probs=73.8

Q ss_pred             ccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHHH
Q 017144          249 MLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKTA  328 (376)
Q Consensus       249 ~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~~  328 (376)
                      .|.|.|++++.+||+++|||++....+    .+..  +..+    +..+.+......    ......++.+.+.|++.+.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~--~~~~----~~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DFAG--VRRG----DIRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SEEE--EEET----TEEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ceeE--eeee----eeeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            488999999999999999999875432    2333  3322    344444432221    1234568999999999999


Q ss_pred             HHHHHcCCeeecCCcc-------CCCCCceEEEEECCCCCeEEEEec
Q 017144          329 EAIKLSGGKITREPGP-------LPGINTKITACLDPDGWKSVFVDN  368 (376)
Q Consensus       329 ~~l~~~G~~~~~~p~~-------~~~~~~~~~~~~DPdG~~iel~~~  368 (376)
                      ++++++++.....++.       .+. .++.+|++|||||+|||..-
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESP-AGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEET-TEEEEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCC-CeEEEEEECCCCCEEEEEeC
Confidence            9999999876544331       122 25789999999999999763

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.24  E-value=2e-11  Score=99.77  Aligned_cols=122  Identities=10%  Similarity=0.045  Sum_probs=88.0

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC----CCCCCCceE
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK----YDIGTGFGH  186 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~----~~~~~g~~h  186 (376)
                      .+.+|+||.+.|+|++++.+||++ |||+...+-...    ....++.|.    +.+.+........    ..++.|+.|
T Consensus         6 g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~G~----i~ll~~~~~~s~~~~~~~~hg~gv~h   76 (150)
T d1cjxa1           6 GLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQGE----INLILNNEPNSIASYFAAEHGPSVCG   76 (150)
T ss_dssp             CEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEETT----EEEEEECCSSSHHHHHHHHHSSEEEE
T ss_pred             ccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEecCc----EEEEecCCCCCHhHhHHhhCCCceEE
Confidence            467999999999999999999987 999988764321    233344332    2222222211111    126789999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCC
Q 017144          187 FGIAVEDVAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPE  243 (376)
Q Consensus       187 i~f~V~d~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~  243 (376)
                      ++|+|+|+++++++++++|+++...|...  +......+++|+|.++.|+++.....
T Consensus        77 iaf~V~D~~~a~~~a~~~Ga~~i~~~~~~--g~~~~~~i~g~gg~~i~Fv~~~~~~~  131 (150)
T d1cjxa1          77 MAFRVKDSQKAYNRALELGAQPIHIDTGP--MELNLPAIKGIGGAPLYLIDRFGEGS  131 (150)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCBCCCCCCT--TCBCCCEEECGGGCEEEEECCCSSSC
T ss_pred             EEEEeCCHHHHHHHHHHCCCEEcccCCCC--CceeeeEEEcCCCCEEEEECcCCCCC
Confidence            99999999999999999999987665432  34456678999999999998766443

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.23  E-value=4.8e-11  Score=92.94  Aligned_cols=104  Identities=16%  Similarity=0.112  Sum_probs=71.6

Q ss_pred             cccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCHHHH
Q 017144          248 VMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDVYKT  327 (376)
Q Consensus       248 v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl~~~  327 (376)
                      ..|.|+|++++++||+++|||++..+..    .+.....+      ...+.+.....    ....+..++.+.+++++..
T Consensus         8 pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~------~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           8 PVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRD------DVTLFISAVQD----QVVPDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEET------TEEEEEEECSC----TTTGGGCEEEEEEECHHHH
T ss_pred             EEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecc------cceeecccccc----ccCCCCceEEEeeccHHHH
Confidence            3488999999999999999999976542    23332222      23344433221    1234556888999999998


Q ss_pred             HHHHHHcCCee--------ecCCccCCCCCceEEEEECCCCCeEEEEe
Q 017144          328 AEAIKLSGGKI--------TREPGPLPGINTKITACLDPDGWKSVFVD  367 (376)
Q Consensus       328 ~~~l~~~G~~~--------~~~p~~~~~~~~~~~~~~DPdG~~iel~~  367 (376)
                      .+.+.+++.+.        ..++..+++  ++.+||+|||||.|||+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEE
Confidence            88777665543        334444454  478999999999999986

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.14  E-value=1.3e-10  Score=99.69  Aligned_cols=101  Identities=19%  Similarity=0.192  Sum_probs=69.8

Q ss_pred             ceeeEEEEEEeC--ChhHHHHHHHHhcCCEEEEEeecCCCceEEEEEeeCCCCceEEEEEEecCCCCC--------CCCC
Q 017144          112 KRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDIPEDRYTNAFLGYGPEDSHFVVELTYNYGVDK--------YDIG  181 (376)
Q Consensus       112 ~~~i~Hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~--------~~~~  181 (376)
                      .++|+||++.|+  |++++..||+++|||+.....+.++..................+.+........        ...+
T Consensus         3 l~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g   82 (203)
T d1cjxa2           3 LKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNG   82 (203)
T ss_dssp             EEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTS
T ss_pred             CCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCC
Confidence            468999999998  899999999999999998776554433222222111221123333333222111        1156


Q ss_pred             CCceEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 017144          182 TGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (376)
Q Consensus       182 ~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p  212 (376)
                      .|++||||.|+|+.+++++|+++|+++...|
T Consensus        83 ~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          83 EGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            8999999999999999999999999987554

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.13  E-value=8.9e-11  Score=95.85  Aligned_cols=117  Identities=11%  Similarity=0.102  Sum_probs=85.4

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC--cc--ccCCCceeEEE
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV--TE--YDKGNGYAQIA  318 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~--~~--~~~g~g~~hia  318 (376)
                      ..|+||.+.|+|++++.+||++ |||+...+....  ...+  ++.+    ...+.+..+...  ..  ..+|+|++|++
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~--~~~l--~~~G----~i~ll~~~~~~s~~~~~~~~hg~gv~hia   78 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK--NVHL--YRQG----EINLILNNEPNSIASYFAAEHGPSVCGMA   78 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS--SEEE--EEET----TEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce--EEEE--EecC----cEEEEecCCCCCHhHhHHhhCCCceEEEE
Confidence            3589999999999999999976 999998765332  2222  3322    233333322111  11  14789999999


Q ss_pred             EEeCCHHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEeccc
Q 017144          319 IGTDDVYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNLD  370 (376)
Q Consensus       319 f~V~Dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  370 (376)
                      |.|+|+++++++++++|++++.+|.. + +...+..+++|+|.++.|+++.+
T Consensus        79 f~V~D~~~a~~~a~~~Ga~~i~~~~~-~-g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          79 FRVKDSQKAYNRALELGAQPIHIDTG-P-MELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             EEESCHHHHHHHHHHTTCCBCCCCCC-T-TCBCCCEEECGGGCEEEEECCCS
T ss_pred             EEeCCHHHHHHHHHHCCCEEcccCCC-C-CceeeeEEEcCCCCEEEEECcCC
Confidence            99999999999999999998877643 2 22457889999999999999863

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.09  E-value=1.2e-10  Score=99.72  Aligned_cols=99  Identities=22%  Similarity=0.212  Sum_probs=70.4

Q ss_pred             CccccccccC--ChhHHHHHHHHhhCCEEeceecCCCCCeEEEEeecCCCCCceEEEEcccCCC--cc------ccCCCc
Q 017144          244 PLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDNPDYKYTIAVMGYGPEDKNAVLELTYNHGV--TE------YDKGNG  313 (376)
Q Consensus       244 ~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~--~~------~~~g~g  313 (376)
                      .|+|++++|+  |++++..||+++|||+.....+.++....+.............+.+..+...  ..      ...|+|
T Consensus         5 ~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~g~G   84 (203)
T d1cjxa2           5 VIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEG   84 (203)
T ss_dssp             EEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSB
T ss_pred             eeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcCCCC
Confidence            5899999997  8999999999999999987665443332322222222223344444332211  11      146789


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 017144          314 YAQIAIGTDDVYKTAEAIKLSGGKITREP  342 (376)
Q Consensus       314 ~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p  342 (376)
                      ++||||.|+|+.+++++|+++|++++..|
T Consensus        85 iqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          85 IQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             CCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            99999999999999999999999998765

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.96  E-value=5.6e-09  Score=88.58  Aligned_cols=101  Identities=17%  Similarity=0.256  Sum_probs=68.3

Q ss_pred             ceeeEEEEEEeC--ChhHHHHHHHHhcCCEEEEEeec-----CCCceEEEEEeeCCCCceEEEEEEecCCCCC-------
Q 017144          112 KRRMLHVVYRVG--DLDKTIKFYTECLGMKLLRKRDI-----PEDRYTNAFLGYGPEDSHFVVELTYNYGVDK-------  177 (376)
Q Consensus       112 ~~~i~Hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~-------  177 (376)
                      .++|+||++.|+  +++++..||+++|||+.......     +.......-+........+.+++........       
T Consensus         4 f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL~   83 (199)
T d1t47a2           4 FQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLE   83 (199)
T ss_dssp             CCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHH
T ss_pred             ceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhhh
Confidence            458999999998  99999999999999988654321     1222222223322222223333222111111       


Q ss_pred             CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 017144          178 YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREP  212 (376)
Q Consensus       178 ~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p  212 (376)
                      ...+.|++||||.|+|+.+++++|+++|+++...|
T Consensus        84 ~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          84 FYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            12467999999999999999999999999988777

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.5e-09  Score=91.61  Aligned_cols=103  Identities=16%  Similarity=0.255  Sum_probs=69.2

Q ss_pred             cccceeeEEEEEEeCC--hhHHHHHHHHhcCCEEEEEeecCC-----CceEEEEEeeCCCCceEEEEEEecCCC--CC--
Q 017144          109 KSDKRRMLHVVYRVGD--LDKTIKFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYGV--DK--  177 (376)
Q Consensus       109 ~~~~~~i~Hv~l~v~D--l~~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~l~l~~~~~~--~~--  177 (376)
                      .....+|+||++.|++  ++++++||+++|||+.....+..+     .......+.....  ...+.+......  ..  
T Consensus        19 ~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~--~i~~~lne~~~~~~~sqi   96 (210)
T d1sqia2          19 SCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEE--SIKMPINEPAPGRKKSQI   96 (210)
T ss_dssp             CCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTS--CCEEEEEECC-----CHH
T ss_pred             CCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCc--cccccccccCCCCcccHH
Confidence            3456789999999998  999999999999998765432111     1112233333333  233333332111  11  


Q ss_pred             -----CCCCCCceEEEEEeCCHHHHHHHHHHcCCeeecCCe
Q 017144          178 -----YDIGTGFGHFGIAVEDVAKTVDLVKAKGGKVTREPG  213 (376)
Q Consensus       178 -----~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~i~~~p~  213 (376)
                           ...|.|++||||.|+|+.++.++|+++|+++...|.
T Consensus        97 ~~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          97 QEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence                 125789999999999999999999999999987764

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.92  E-value=6.9e-09  Score=89.85  Aligned_cols=95  Identities=18%  Similarity=0.274  Sum_probs=64.3

Q ss_pred             cceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCC-----CceEEEEEeeCCCCceEEEEEEecCCC---CC-----
Q 017144          111 DKRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPE-----DRYTNAFLGYGPEDSHFVVELTYNYGV---DK-----  177 (376)
Q Consensus       111 ~~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~-----~~~~~~~l~~g~~~~~~~l~l~~~~~~---~~-----  177 (376)
                      ..++|+||++.|+|++++.+||+++|||+...+....+     .......+...+.  ...+.+......   ..     
T Consensus         6 Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g--~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           6 GLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSE--NVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             SEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSS--CCEEEEEEECCCSSSCCHHHHH
T ss_pred             CcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCC--ccceeeeeecCCCCCccHHHHH
Confidence            35699999999999999999999999999876543222     1222333333332  334444432111   11     


Q ss_pred             --CCCCCCceEEEEEeCCHHHHHHHHHHcCCe
Q 017144          178 --YDIGTGFGHFGIAVEDVAKTVDLVKAKGGK  207 (376)
Q Consensus       178 --~~~~~g~~hi~f~V~d~d~~~~rl~~~G~~  207 (376)
                        ...+.|++||||.|+|+.+++++|+++|+.
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence              113579999999999999999999988754

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.92  E-value=3.7e-08  Score=78.52  Aligned_cols=113  Identities=19%  Similarity=0.167  Sum_probs=73.6

Q ss_pred             EEeC-ChhHHHHHHHHhcCCEEEEEeecCCCc------------eEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceE
Q 017144          120 YRVG-DLDKTIKFYTECLGMKLLRKRDIPEDR------------YTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGH  186 (376)
Q Consensus       120 l~v~-Dl~~a~~FY~~vLG~~~~~~~~~~~~~------------~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~h  186 (376)
                      |..+ |.++|++||+++||+++.......+..            ...+.+.+++    ..+.........+. ...+-.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g----~~~~~~d~~~~~~~-~~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGS----FALMASDNHPAYPY-EGIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETT----EEEEEEECCTTSCC-CCCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcC----eEEEecccCCcccc-cCCCcEE
Confidence            3444 999999999999999998765443321            1122333332    12222221111111 2233456


Q ss_pred             EEEEeCCHH--HHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          187 FGIAVEDVA--KTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       187 i~f~V~d~d--~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      +++.+++.|  +.+.++.++|+++..+|.+.++ +.+..+|+||+|+.|+|...
T Consensus        83 ~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNALAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHHHHHHHHhhcccCceeecCccccCC-CcEEEEEECCCCCEEEEEec
Confidence            888888755  4466677889999999999886 56789999999999999754

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.4e-09  Score=91.64  Aligned_cols=97  Identities=16%  Similarity=0.261  Sum_probs=67.1

Q ss_pred             CccccccccCC--hhHHHHHHHHhhCCEEeceecCC-----CCCeEEEEeecCCCCCceEEEEcccCCC---cc------
Q 017144          244 PLCQVMLRVGD--LDRAINFYKKAFGMELLRKRDNP-----DYKYTIAVMGYGPEDKNAVLELTYNHGV---TE------  307 (376)
Q Consensus       244 ~~~~v~L~v~D--~~~a~~FY~~~lG~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~l~l~~~~~~---~~------  307 (376)
                      .|+|+++.|++  +++++.||+++|||+.....+..     ........+...  +....+.+..+...   ..      
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~--~~~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY--EESIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECT--TSCCEEEEEECC-----CHHHHHHH
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEec--CccccccccccCCCCcccHHHHHHh
Confidence            58999999987  99999999999999976543321     111222223322  22344444432211   11      


Q ss_pred             ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 017144          308 YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  342 (376)
Q Consensus       308 ~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p  342 (376)
                      ...|.|++||||.|+|+.+++++|+++|++++..|
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P  136 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP  136 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCC
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence            24689999999999999999999999999999877

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.89  E-value=4.1e-09  Score=89.46  Aligned_cols=98  Identities=16%  Similarity=0.300  Sum_probs=69.2

Q ss_pred             CCccccccccC--ChhHHHHHHHHhhCCEEeceecC-----CCCCeEEEEeecCCCCCceEEEEcccC--C-Ccc-----
Q 017144          243 EPLCQVMLRVG--DLDRAINFYKKAFGMELLRKRDN-----PDYKYTIAVMGYGPEDKNAVLELTYNH--G-VTE-----  307 (376)
Q Consensus       243 ~~~~~v~L~v~--D~~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~l~l~~~~--~-~~~-----  307 (376)
                      ..|+|+++.|+  ++++++.||+++|||+.......     +........+...  +....+.+..+.  . .+.     
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~--~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADG--TLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECT--TSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecccc--ccccceeecccCccccccchhhhh
Confidence            35899999998  99999999999999998765322     2222332223322  233444443221  1 111     


Q ss_pred             -ccCCCceeEEEEEeCCHHHHHHHHHHcCCeeecCC
Q 017144          308 -YDKGNGYAQIAIGTDDVYKTAEAIKLSGGKITREP  342 (376)
Q Consensus       308 -~~~g~g~~hiaf~V~Dl~~~~~~l~~~G~~~~~~p  342 (376)
                       ...|+|++||||.|+|+.++++.|+++|++++..|
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p  118 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP  118 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCC
Confidence             14678999999999999999999999999999877

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.80  E-value=8.4e-09  Score=89.30  Aligned_cols=98  Identities=16%  Similarity=0.248  Sum_probs=66.0

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecC-----CCCCeEEEEeecCCCCCceEEEEcccCCC----cc------
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDN-----PDYKYTIAVMGYGPEDKNAVLELTYNHGV----TE------  307 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~l~l~~~~~~----~~------  307 (376)
                      .+++||++.|+|+++++.||+++|||+.......     +........+...  ++...+.+......    +.      
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~--~g~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN--SENVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECS--SSCCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcC--CCccceeeeeecCCCCCccHHHHHHH
Confidence            3689999999999999999999999998755422     2222333333322  22344444432111    11      


Q ss_pred             ccCCCceeEEEEEeCCHHHHHHHHHHcC----CeeecCC
Q 017144          308 YDKGNGYAQIAIGTDDVYKTAEAIKLSG----GKITREP  342 (376)
Q Consensus       308 ~~~g~g~~hiaf~V~Dl~~~~~~l~~~G----~~~~~~p  342 (376)
                      ...|.|++||||.|+|+.++++.|+++|    +++...|
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            1357899999999999999999999875    5566555

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.78  E-value=2.4e-08  Score=79.64  Aligned_cols=111  Identities=19%  Similarity=0.113  Sum_probs=70.9

Q ss_pred             CChhHHHHHHHHhhCCEEeceecCCCC------------CeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEE
Q 017144          253 GDLDRAINFYKKAFGMELLRKRDNPDY------------KYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIG  320 (376)
Q Consensus       253 ~D~~~a~~FY~~~lG~~~~~~~~~~~~------------~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~  320 (376)
                      .|.++|++||+++||+++.......+.            ....+.+..+    +..+.........+ .....-.++++.
T Consensus        12 g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~~~-~~~~~~~~~~l~   86 (137)
T d1u6la_          12 GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYP-YEGIKGCSISLN   86 (137)
T ss_dssp             SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSC-CCCCCSEEEEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCccc-ccCCCcEEEEEE
Confidence            499999999999999999765432221            1111112211    11111111111111 122344678888


Q ss_pred             eCCHH--HHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          321 TDDVY--KTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       321 V~Dl~--~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      +++.+  +.+.++.++|++++.+|.+.++| .+..+|+||+|+.|+|....
T Consensus        87 ~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG-~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          87 VDSKAEAERLFNALAEGGSVQMPLGPTFWA-ASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CSSHHHHHHHHHHHHTTSEEEEEEEEETTE-EEEEEEECTTSCEEEEEESC
T ss_pred             cCCHHHHHHHHhhcccCceeecCccccCCC-cEEEEEECCCCCEEEEEecC
Confidence            77544  55777778999999999998886 48899999999999997543

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.65  E-value=1.1e-07  Score=82.35  Aligned_cols=93  Identities=17%  Similarity=0.279  Sum_probs=62.6

Q ss_pred             ceeeEEEEEEeCChhHHHHHHHHhcCCEEEEEeecCCC-----ceEEEEEeeCCCCceEEEEEEecCCC---CC------
Q 017144          112 KRRMLHVVYRVGDLDKTIKFYTECLGMKLLRKRDIPED-----RYTNAFLGYGPEDSHFVVELTYNYGV---DK------  177 (376)
Q Consensus       112 ~~~i~Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~-----~~~~~~l~~g~~~~~~~l~l~~~~~~---~~------  177 (376)
                      .++|+||++.|+|++++.+||+++||+.........+-     .....-+.....  ...+.+......   ..      
T Consensus        20 l~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g--~v~~~l~E~~~~~~~~sqi~~FL   97 (230)
T d1sqda2          20 IRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDE--MVLLPINEPVHGTKRKSQIQTYL   97 (230)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTS--CSEEEEEEECCC---CCHHHHHH
T ss_pred             cCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCc--ccceeEEeecCCCCCcchHHHHH
Confidence            56899999999999999999999999988776543321     111111222222  334444432111   11      


Q ss_pred             -CCCCCCceEEEEEeCCHHHHHHHHHHcCC
Q 017144          178 -YDIGTGFGHFGIAVEDVAKTVDLVKAKGG  206 (376)
Q Consensus       178 -~~~~~g~~hi~f~V~d~d~~~~rl~~~G~  206 (376)
                       ...|.|++||||.|+|+.+++++|+++|+
T Consensus        98 ~~~~G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2          98 EHNEGAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             HHHTSCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             hhccCCceeEEEEEeCCHHHHHHHHHHhhc
Confidence             12578999999999999999999998754

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.59  E-value=4.6e-08  Score=84.79  Aligned_cols=95  Identities=17%  Similarity=0.268  Sum_probs=64.4

Q ss_pred             CCccccccccCChhHHHHHHHHhhCCEEeceecCCC-----CCeEEEEeecCCCCCceEEEEcccCCC----cc------
Q 017144          243 EPLCQVMLRVGDLDRAINFYKKAFGMELLRKRDNPD-----YKYTIAVMGYGPEDKNAVLELTYNHGV----TE------  307 (376)
Q Consensus       243 ~~~~~v~L~v~D~~~a~~FY~~~lG~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~l~~~~~~----~~------  307 (376)
                      ..|+||++.|+|++++.+||+++||++........+     .......+..  .++...+.+.+....    ..      
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s--~~g~v~~~l~E~~~~~~~~sqi~~FL~   98 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLAS--NDEMVLLPINEPVHGTKRKSQIQTYLE   98 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEEC--TTSCSEEEEEEECCC---CCHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccC--CCcccceeEEeecCCCCCcchHHHHHh
Confidence            358999999999999999999999998876653221     1122222222  223444444432211    11      


Q ss_pred             ccCCCceeEEEEEeCCHHHHHHHHHHc----CCeee
Q 017144          308 YDKGNGYAQIAIGTDDVYKTAEAIKLS----GGKIT  339 (376)
Q Consensus       308 ~~~g~g~~hiaf~V~Dl~~~~~~l~~~----G~~~~  339 (376)
                      ...|.|++||||.|+|+.++++.|+++    |++++
T Consensus        99 ~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~  134 (230)
T d1sqda2          99 HNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFM  134 (230)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBC
T ss_pred             hccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccc
Confidence            246899999999999999999999996    55555

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.55  E-value=4e-06  Score=66.15  Aligned_cols=115  Identities=17%  Similarity=0.187  Sum_probs=72.3

Q ss_pred             EEEEEeCChhHHHHHHHHhcCCEEEEEee-------cCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          117 HVVYRVGDLDKTIKFYTECLGMKLLRKRD-------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       117 Hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~-------~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      ++.+.-+|.+++.+||+++||.+...+..       .+++....+-+.+++.    .+.+...........+. -..+++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~----~i~~~d~~~~~~~~~~~-~~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ----SVHCIDSHVRHAFDFTP-AFSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE----EEEEEEESSCCSCCCCT-TEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCE----EEEEecCCCCCCCCCCC-ceEEEE
Confidence            44455568999999999999987654431       1223334455665532    23333322222222233 345778


Q ss_pred             EeCCHHHH--HHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEee
Q 017144          190 AVEDVAKT--VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLE  237 (376)
Q Consensus       190 ~V~d~d~~--~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~  237 (376)
                      .+++.|..  +.+..+.|+++..++.+.++ +.+...++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGF-SQRFAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSS-SSEEEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccc-cceEEEEECCCCCEEEEEc
Confidence            88875533  44445778899888888776 5678889999999999863

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.42  E-value=3.8e-06  Score=66.24  Aligned_cols=109  Identities=15%  Similarity=0.098  Sum_probs=66.4

Q ss_pred             cCChhHHHHHHHHhhCCEEecee-------cCCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCCH
Q 017144          252 VGDLDRAINFYKKAFGMELLRKR-------DNPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDDV  324 (376)
Q Consensus       252 v~D~~~a~~FY~~~lG~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~Dl  324 (376)
                      -.+.++|++||+++||.+.....       +.+++.....-+..+    +..+-+...........+++ ..+.+.+++.
T Consensus        14 g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~~~~-~s~~l~~~~~   88 (134)
T d1u7ia_          14 GVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDFTPA-FSFFVDCESN   88 (134)
T ss_dssp             SSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCCCTT-EEEEEECCCH
T ss_pred             CcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCCCCc-eEEEEEeccH
Confidence            35899999999999998654332       122333333333332    22222222111111222333 4577777654


Q ss_pred             HH--HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEE
Q 017144          325 YK--TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFV  366 (376)
Q Consensus       325 ~~--~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~  366 (376)
                      +.  .+.+..+.|++++.++.+.+.+ .++..++||.|+.|.|.
T Consensus        89 d~~~~~~~~l~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          89 AQIERLAEALSDGGKALMPLGDYGFS-QRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             HHHHHHHHHHHTTSEEEEEEECCSSS-SEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHHhcCCEEecCccccccc-ceEEEEECCCCCEEEEE
Confidence            33  3555557788999999888776 48899999999999985

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.97  E-value=0.00018  Score=55.82  Aligned_cols=110  Identities=11%  Similarity=0.072  Sum_probs=67.0

Q ss_pred             EEEEeC-ChhHHHHHHHHhcCCEEEEEe-e------cCCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEE
Q 017144          118 VVYRVG-DLDKTIKFYTECLGMKLLRKR-D------IPEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGI  189 (376)
Q Consensus       118 v~l~v~-Dl~~a~~FY~~vLG~~~~~~~-~------~~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f  189 (376)
                      -.|..+ |.+++.+||+++||-..+.+. .      ..++....+-+.+++    ..+-+.......    +. -..+.+
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g----~~~~~~d~~~~~----~~-~~s~~v   78 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAIDANSGT----EL-PISLFV   78 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEEC------------CCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECC----EEEEeecCCCCC----CC-CEEEEe
Confidence            345665 999999999999965433322 1      122334445566553    223222221111    11 124678


Q ss_pred             EeCCHHHH---HHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeec
Q 017144          190 AVEDVAKT---VDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLER  238 (376)
Q Consensus       190 ~V~d~d~~---~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~  238 (376)
                      .+++.+++   +++| +.|+++..++.+.++ +.+...++||.|+.|.|..+
T Consensus        79 ~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          79 TVKDTIEMERLFNGL-KDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             ECSSHHHHHHHHHHH-HTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             ccCCHHHHHHHHHHh-ccCCEEecccccccc-cceEEEEECCCCCEEEEeCC
Confidence            88886654   4455 467788888888876 56788899999999998653

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.83  E-value=0.00015  Score=56.39  Aligned_cols=109  Identities=12%  Similarity=0.118  Sum_probs=64.5

Q ss_pred             ccc-CChhHHHHHHHHhhCC-EEeceec------CCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEe
Q 017144          250 LRV-GDLDRAINFYKKAFGM-ELLRKRD------NPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGT  321 (376)
Q Consensus       250 L~v-~D~~~a~~FY~~~lG~-~~~~~~~------~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V  321 (376)
                      |.. .|.++|++||+++||- ++.....      .+++.....-+..+    +..+.+.....    ..+.+ ..+.+.+
T Consensus        10 l~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~----~~~~~-~s~~v~~   80 (129)
T d1tsja_          10 LMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANS----GTELP-ISLFVTV   80 (129)
T ss_dssp             EECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC-----------C-CCEEEEC
T ss_pred             EEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCC----CCCCC-EEEEecc
Confidence            444 5999999999999965 4433221      12333333334432    22232221111    11111 2466677


Q ss_pred             CCHHH---HHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          322 DDVYK---TAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       322 ~Dl~~---~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                      ++.++   +.++|. .|++++.++.+.+.+ .+...++||.|+.|.|..++
T Consensus        81 ~~~~e~~~~~~~L~-~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~~pe  129 (129)
T d1tsja_          81 KDTIEMERLFNGLK-DEGAILMPKTNMPPY-REFAWVQDKFGVSFQLALPE  129 (129)
T ss_dssp             SSHHHHHHHHHHHH-TTCEEEEEEEEETTE-EEEEEEECTTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHhc-cCCEEeccccccccc-ceEEEEECCCCCEEEEeCCC
Confidence            76554   455665 567999988888875 48899999999999997653

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.52  E-value=0.032  Score=44.01  Aligned_cols=126  Identities=13%  Similarity=0.126  Sum_probs=73.5

Q ss_pred             eCChhHHHHHHHHhcCC-EEEEEeec-------CCCceEEEEEeeCCCCceEEEEEEecCCCCCCCCCCCceEEEEEeCC
Q 017144          122 VGDLDKTIKFYTECLGM-KLLRKRDI-------PEDRYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVED  193 (376)
Q Consensus       122 v~Dl~~a~~FY~~vLG~-~~~~~~~~-------~~~~~~~~~l~~g~~~~~~~l~l~~~~~~~~~~~~~g~~hi~f~V~d  193 (376)
                      -.|.++|.+||+++||- ++......       +.+..-.+.+.+++   . .+....  ..+.+..+.++ ++.+.++|
T Consensus        10 ~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g---~-~lm~sD--~~~~~~~~~~~-sl~l~~d~   82 (156)
T d1u69a_          10 DSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG---I-PCLGLN--GGPAFRHSEAF-SFQVATDD   82 (156)
T ss_dssp             SSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT---E-EEEEEE--CCTTCCCCTTE-EEEEEESS
T ss_pred             CCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECC---e-EEEeec--CCCCCCCCCCe-EEEEecCC
Confidence            37899999999999964 44332211       11233445555543   1 222222  12233344444 58888888


Q ss_pred             ---HHHHHHHHHHcCCeeecCCeecCCCCeEEEEEEcCCCCEEEEeecCCCCCCccccccccCChhHHHHHHHHhhCCEE
Q 017144          194 ---VAKTVDLVKAKGGKVTREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAINFYKKAFGMEL  270 (376)
Q Consensus       194 ---~d~~~~rl~~~G~~i~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~v~L~v~D~~~a~~FY~~~lG~~~  270 (376)
                         +++++++|.+.| ++..+   .       -.++|+.|+.|.|+.+.      -.-.+.-.|.+++.+-++.++.|+-
T Consensus        83 ~eE~d~~f~~LsegG-~~~~~---~-------G~v~DkFGV~Wqi~~~~------~~~~~~~~~~~~~~~~~~a~~~m~k  145 (156)
T d1u69a_          83 QAETDRLWNAIVDNG-GEESA---C-------GWCRDKWGISWQITPRV------LSEAIASPDRAAARRAFEAMMTMGR  145 (156)
T ss_dssp             HHHHHHHHHHHHHTT-CEECS---T-------TEEECTTSCEEEEEEHH------HHHHHTCSSHHHHHHHHHHHTTCSS
T ss_pred             HHHHHHHHHHHhccC-CCCCC---C-------eEEECCCCCEEEeChHH------HHHHhcCCCHHHHHHHHHHHHcCcC
Confidence               556677776655 33322   1       14999999999998442      0111234677888888888877654


Q ss_pred             e
Q 017144          271 L  271 (376)
Q Consensus       271 ~  271 (376)
                      .
T Consensus       146 ~  146 (156)
T d1u69a_         146 I  146 (156)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.55  E-value=0.094  Score=41.14  Aligned_cols=100  Identities=15%  Similarity=0.083  Sum_probs=58.0

Q ss_pred             cCChhHHHHHHHHhhC-CEEeceec-------CCCCCeEEEEeecCCCCCceEEEEcccCCCccccCCCceeEEEEEeCC
Q 017144          252 VGDLDRAINFYKKAFG-MELLRKRD-------NPDYKYTIAVMGYGPEDKNAVLELTYNHGVTEYDKGNGYAQIAIGTDD  323 (376)
Q Consensus       252 v~D~~~a~~FY~~~lG-~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~g~g~~hiaf~V~D  323 (376)
                      -.+.++|.+||.++|| -++.....       .+.++.....+..+    +..+....  ....+..+++ .++.+.++|
T Consensus        10 ~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~----g~~lm~sD--~~~~~~~~~~-~sl~l~~d~   82 (156)
T d1u69a_          10 DSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLN--GGPAFRHSEA-FSFQVATDD   82 (156)
T ss_dssp             SSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEE--CCTTCCCCTT-EEEEEEESS
T ss_pred             CCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC----CeEEEeec--CCCCCCCCCC-eEEEEecCC
Confidence            3789999999999995 33333221       12233333334332    12222211  1122334444 368888876


Q ss_pred             ---HHHHHHHHHHcCCeeecCCccCCCCCceEEEEECCCCCeEEEEecc
Q 017144          324 ---VYKTAEAIKLSGGKITREPGPLPGINTKITACLDPDGWKSVFVDNL  369 (376)
Q Consensus       324 ---l~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  369 (376)
                         +++++++|.+.| ++..     ++     .+++|+-|..|.|+.++
T Consensus        83 ~eE~d~~f~~LsegG-~~~~-----~~-----G~v~DkFGV~Wqi~~~~  120 (156)
T d1u69a_          83 QAETDRLWNAIVDNG-GEES-----AC-----GWCRDKWGISWQITPRV  120 (156)
T ss_dssp             HHHHHHHHHHHHHTT-CEEC-----ST-----TEEECTTSCEEEEEEHH
T ss_pred             HHHHHHHHHHHhccC-CCCC-----CC-----eEEECCCCCEEEeChHH
Confidence               556778887766 3332     33     26999999999999664