Citrus Sinensis ID: 017181

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
MSMAIATSSASVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLTS
ccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccEEEEEEEcHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHcccccccccccHHHHHccccccc
cccHHccHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccEccccccccHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHcEEEEEEcccccccccccHHHHHcEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcEEEEEEcccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHcHHHcccEEEcccccccccccEEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHHHccccc
MSMAIATSSASVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDslvdsgnnnylattaradappygidfpthrptgrfsngfnipdiisqrigqseaplpylspelngqrlliganfasagigilndtgIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVggndfvnnyylvpysarsrqftlpNYVKYIISEYRKLLMRLYELGARRVlvtgtgplgcvpaelalrgsnggcsaELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTqqthmdfvsnpqaygfttakvaccgqgpnnglgLCTAlsnlcpnrqlyafwdpfhpsekaNRLIVEQIFSgstnymtpmnLSTVMALDSLTS
MSMAIATSSASVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVpysarsrqftlpNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGstnymtpmNLSTVmaldslts
MSMAIATSSASVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLTS
***********VAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNL***********
*************MRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALD****
**********SVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLTS
*****ATSSASVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDS***
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSMAIATSSASVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLTS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query376 2.2.26 [Sep-21-2011]
Q8LB81366 GDSL esterase/lipase At5g yes no 0.917 0.942 0.710 1e-151
Q5PNZ0362 GDSL esterase/lipase At5g no no 0.957 0.994 0.704 1e-151
Q9M8Y5366 GDSL esterase/lipase LTL1 no no 0.941 0.967 0.673 1e-143
Q9SVU5367 GDSL esterase/lipase At4g no no 0.890 0.912 0.692 1e-137
Q9M2R9374 GDSL esterase/lipase At3g no no 0.869 0.874 0.413 6e-68
O80470387 GDSL esterase/lipase At2g no no 0.880 0.855 0.382 7e-68
O23470368 GDSL esterase/lipase At4g no no 0.867 0.885 0.407 8e-67
Q9FHQ1356 GDSL esterase/lipase At5g no no 0.824 0.870 0.390 2e-61
Q8LFJ9364 GDSL esterase/lipase 7 OS no no 0.880 0.909 0.375 2e-59
Q9SF78384 GDSL esterase/lipase At1g no no 0.875 0.856 0.380 6e-59
>sp|Q8LB81|GDL79_ARATH GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1 Back     alignment and function desciption
 Score =  536 bits (1380), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 246/346 (71%), Positives = 298/346 (86%), Gaps = 1/346 (0%)

Query: 30  IVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDII 89
           +V  A  RAF VFGDSLVD+GNN++LATTARAD  PYGIDFPTHRPTGRFSNG NIPD+I
Sbjct: 22  LVPQANARAFLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLI 81

Query: 90  SQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEY 149
           S+ +GQ E+P+PYLSP L   +LL GANFASAGIGILNDTGIQF+NIIR+ +QL+YF +Y
Sbjct: 82  SEHLGQ-ESPMPYLSPMLKKDKLLRGANFASAGIGILNDTGIQFLNIIRITKQLEYFEQY 140

Query: 150 QRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEY 209
           + RVS ++G ++  +LVN ALVLIT+GGNDFVNNYYLVP+SARSRQF+LP+YV ++ISEY
Sbjct: 141 KVRVSGLVGEEEMNRLVNGALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEY 200

Query: 210 RKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQG 269
           RK+L ++Y+LGARRVLVTGTGP+GCVPAELA R  NG C+ ELQRA SL+NPQL QM+  
Sbjct: 201 RKVLRKMYDLGARRVLVTGTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITD 260

Query: 270 INRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNR 329
           +N ++G + FIAANTQQ HMDF+S+PQAYGF T+KVACCGQGP NG+GLCT LSNLCPNR
Sbjct: 261 LNNEVGSSAFIAANTQQMHMDFISDPQAYGFVTSKVACCGQGPYNGIGLCTPLSNLCPNR 320

Query: 330 QLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMALDSLT 375
            L+AFWDPFHPSEKA+R+I +QI +GS  YM PMNLST++ +DS+T
Sbjct: 321 DLFAFWDPFHPSEKASRIIAQQILNGSPEYMHPMNLSTILTVDSMT 366

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q5PNZ0|GDL77_ARATH GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8Y5|LTL1_ARATH GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SVU5|GDL67_ARATH GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1 Back     alignment and function description
>sp|Q9M2R9|GDL58_ARATH GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1 Back     alignment and function description
>sp|O80470|GDL38_ARATH GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1 Back     alignment and function description
>sp|O23470|GDL64_ARATH GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=3 SV=2 Back     alignment and function description
>sp|Q9FHQ1|GDL80_ARATH GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1 Back     alignment and function description
>sp|Q8LFJ9|GLIP7_ARATH GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1 Back     alignment and function description
>sp|Q9SF78|GDL29_ARATH GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
118488183368 unknown [Populus trichocarpa] 0.976 0.997 0.771 1e-171
224123622368 predicted protein [Populus trichocarpa] 0.976 0.997 0.769 1e-171
255562027369 zinc finger protein, putative [Ricinus c 0.978 0.997 0.794 1e-170
224144645364 predicted protein [Populus trichocarpa] 0.941 0.972 0.777 1e-167
255562023364 zinc finger protein, putative [Ricinus c 0.954 0.986 0.738 1e-162
225430643368 PREDICTED: GDSL esterase/lipase At5g3337 0.965 0.986 0.734 1e-162
356506018365 PREDICTED: GDSL esterase/lipase At5g3337 0.965 0.994 0.742 1e-161
147828545354 hypothetical protein VITISV_039098 [Viti 0.925 0.983 0.759 1e-161
296085159362 unnamed protein product [Vitis vinifera] 0.954 0.991 0.736 1e-161
356573163370 PREDICTED: GDSL esterase/lipase At5g3337 0.949 0.964 0.756 1e-161
>gi|118488183|gb|ABK95911.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  607 bits (1565), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 284/368 (77%), Positives = 329/368 (89%), Gaps = 1/368 (0%)

Query: 8   SSASVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYG 67
           +S S A  S+ +I G+A  LG+IV  A+ RAF VFGDSLVDSGNNNYLATTARAD+ PYG
Sbjct: 2   ASNSSACSSYWVISGLALVLGAIVHQADARAFLVFGDSLVDSGNNNYLATTARADSYPYG 61

Query: 68  IDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILN 127
           ID+PTH+ TGRFSNG NIPD+IS++IG SE+PLPYLSPEL GQ+LL+GANFASAGIGILN
Sbjct: 62  IDYPTHQATGRFSNGLNIPDLISEQIG-SESPLPYLSPELRGQKLLVGANFASAGIGILN 120

Query: 128 DTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLV 187
           DTGIQF+NIIRM RQL+YF +YQ+RV A+IGA++A++LVN++L+L+TVGGNDFVNNYYLV
Sbjct: 121 DTGIQFLNIIRMHRQLEYFQQYQQRVGALIGAEKAKRLVNQSLILLTVGGNDFVNNYYLV 180

Query: 188 PYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGG 247
           PYSARSRQ+ LP+YVK++ISEY+KLLMRLY LGARRVLVTGTGPLGCVPAELA R +NGG
Sbjct: 181 PYSARSRQYDLPDYVKHLISEYKKLLMRLYNLGARRVLVTGTGPLGCVPAELATRSTNGG 240

Query: 248 CSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVAC 307
           CSAELQRA +LYNPQLE M+  +NRKIG  VFIAANT Q H DFVSNPQAYGFTT+K+AC
Sbjct: 241 CSAELQRAAALYNPQLESMIIDVNRKIGSDVFIAANTHQMHADFVSNPQAYGFTTSKIAC 300

Query: 308 CGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNLST 367
           CGQGP NGLGLCT LSNLCPNR+LYAFWDPFHPSEKAN++IV+QI +GST YM PMNLST
Sbjct: 301 CGQGPYNGLGLCTLLSNLCPNRELYAFWDPFHPSEKANKIIVQQIMTGSTRYMKPMNLST 360

Query: 368 VMALDSLT 375
           +MALDS T
Sbjct: 361 IMALDSRT 368

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224123622|ref|XP_002319125.1| predicted protein [Populus trichocarpa] gi|222857501|gb|EEE95048.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255562027|ref|XP_002522022.1| zinc finger protein, putative [Ricinus communis] gi|223538826|gb|EEF40426.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224144645|ref|XP_002325361.1| predicted protein [Populus trichocarpa] gi|222862236|gb|EEE99742.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255562023|ref|XP_002522020.1| zinc finger protein, putative [Ricinus communis] gi|223538824|gb|EEF40424.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225430643|ref|XP_002268826.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356506018|ref|XP_003521785.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Glycine max] Back     alignment and taxonomy information
>gi|147828545|emb|CAN66351.1| hypothetical protein VITISV_039098 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296085159|emb|CBI28654.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356573163|ref|XP_003554733.1| PREDICTED: GDSL esterase/lipase At5g33370-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
TAIR|locus:2146223362 AT5G18430 "AT5G18430" [Arabido 0.957 0.994 0.704 1.9e-138
TAIR|locus:2145969366 AT5G33370 "AT5G33370" [Arabido 0.917 0.942 0.710 1.3e-137
TAIR|locus:2103005366 LTL1 "AT3G04290" [Arabidopsis 0.938 0.964 0.675 1.9e-131
TAIR|locus:2117763367 AT4G28780 "AT4G28780" [Arabido 0.960 0.983 0.650 2.9e-126
TAIR|locus:2074840374 AT3G50400 "AT3G50400" [Arabido 0.869 0.874 0.413 2.5e-65
TAIR|locus:2046743387 AT2G23540 "AT2G23540" [Arabido 0.872 0.847 0.389 1.4e-64
TAIR|locus:2151744356 AT5G37690 [Arabidopsis thalian 0.848 0.896 0.385 1e-59
TAIR|locus:2143156364 GLIP7 "AT5G15720" [Arabidopsis 0.864 0.892 0.382 4.5e-59
TAIR|locus:2032333374 AT1G71250 "AT1G71250" [Arabido 0.880 0.885 0.354 1.2e-58
TAIR|locus:2824531384 AT1G71691 "AT1G71691" [Arabido 0.875 0.856 0.380 2.5e-58
TAIR|locus:2146223 AT5G18430 "AT5G18430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1355 (482.0 bits), Expect = 1.9e-138, P = 1.9e-138
 Identities = 258/366 (70%), Positives = 300/366 (81%)

Query:     7 TSSASVAMRSWMMIIGIAFALGSIVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPY 66
             T S  +A  S  ++  ++   G IV   EGRAFFVFGDSLVDSGNNNYL TTARAD+PPY
Sbjct:     2 TISTVIAFMSMFLVFVMS---GPIV--VEGRAFFVFGDSLVDSGNNNYLVTTARADSPPY 56

Query:    67 GIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGIL 126
             GIDFPT RPTGRFSNG NIPD+IS+ IG  E PLPYLSPEL G+ LL GANFASAGIGIL
Sbjct:    57 GIDFPTRRPTGRFSNGLNIPDLISEAIGNEEPPLPYLSPELRGRSLLNGANFASAGIGIL 116

Query:   127 NDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYL 186
             NDTG QF+NIIRM++QLDYF +YQ+RVS +IG  Q ++LV++ALVLITVGGNDFVNNY+L
Sbjct:   117 NDTGFQFINIIRMYQQLDYFQQYQQRVSRLIGKPQTQRLVSQALVLITVGGNDFVNNYFL 176

Query:   187 VPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRG-SN 245
              PYSARSRQFTLP+YV+ +ISEY+K+L+RL  LG  RVLVTG GPLGC PAELA  G SN
Sbjct:   177 FPYSARSRQFTLPDYVRLLISEYKKILLRLNSLGVGRVLVTGAGPLGCAPAELARSGTSN 236

Query:   246 GGCSAELQRATSLYNPQLEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKV 305
             G CSAELQRA SLY+PQL QM+  +N+KIG+ VFIAANT Q   DF+S P+ YGF T+KV
Sbjct:   237 GRCSAELQRAASLYDPQLLQMINELNKKIGRNVFIAANTNQMQEDFLSTPRRYGFVTSKV 296

Query:   306 ACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSGSTNYMTPMNL 365
             ACCGQGP NG+GLCT LSNLCPNR+LY FWD FHP+EKANR+IV  I +G+T YM PMNL
Sbjct:   297 ACCGQGPYNGMGLCTVLSNLCPNRELYVFWDAFHPTEKANRMIVRHILTGTTKYMNPMNL 356

Query:   366 STVMAL 371
             S+ +AL
Sbjct:   357 SSALAL 362
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
TAIR|locus:2145969 AT5G33370 "AT5G33370" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2103005 LTL1 "AT3G04290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117763 AT4G28780 "AT4G28780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074840 AT3G50400 "AT3G50400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046743 AT2G23540 "AT2G23540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151744 AT5G37690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8LB81GDL79_ARATH3, ., 1, ., 1, ., -0.71090.91750.9426yesno
Q5PNZ0GDL77_ARATH3, ., 1, ., 1, ., -0.70490.95740.9944nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.10.691
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 1e-125
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 5e-80
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 3e-35
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 6e-18
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 7e-15
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 2e-10
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  363 bits (935), Expect = e-125
 Identities = 142/321 (44%), Positives = 201/321 (62%), Gaps = 9/321 (2%)

Query: 38  AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSE 97
           A FVFGDSLVD+GNNNYL T A+A+ PPYGIDFP  RPTGRFSNG  I D I++ +G   
Sbjct: 2   ALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFP-GRPTGRFSNGRLIIDFIAEALGLPL 60

Query: 98  APLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVI 157
            P PYLSP       L G NFAS G GIL+ TG    ++I +  QL+YF EY+ R+ A++
Sbjct: 61  LPPPYLSPN-GSSDFLTGVNFASGGAGILDSTG-FLGSVISLSVQLEYFKEYKERLRALV 118

Query: 158 GAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLY 217
           G + A  +++++L LI++G ND++NNY+    +  +RQ+ +  YV +++S     + RLY
Sbjct: 119 GEEAAADILSKSLFLISIGSNDYLNNYF----ANPTRQYEVEAYVPFLVSNISSAIKRLY 174

Query: 218 ELGARRVLVTGTGPLGCVPAELALRGSN-GGCSAELQRATSLYNPQLEQMLQGINRKIGQ 276
           +LGAR+ +V G GPLGC+P++  L G + GGC  EL     L+N +L+++L  + R++  
Sbjct: 175 DLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPG 234

Query: 277 TVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTAL-SNLCPNRQLYAFW 335
             F+ A+     +D + NP  YGF     ACCG G   G  LC    S +CP+   Y FW
Sbjct: 235 AKFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFW 294

Query: 336 DPFHPSEKANRLIVEQIFSGS 356
           D  HP+E ANR+I + + SG 
Sbjct: 295 DGVHPTEAANRIIADALLSGP 315

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 376
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.95
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 99.47
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 99.42
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.41
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 99.37
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 99.37
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 99.35
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 99.34
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.32
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 99.31
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 99.28
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 99.25
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 99.24
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 99.24
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 99.24
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.23
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 99.21
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 99.19
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 99.17
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 99.17
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 99.12
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 99.07
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 99.0
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 98.96
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 98.92
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 98.9
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 98.85
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 98.77
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.57
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 98.52
COG2755216 TesA Lysophospholipase L1 and related esterases [A 98.4
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.25
KOG3670397 consensus Phospholipase [Lipid transport and metab 98.03
COG2845354 Uncharacterized protein conserved in bacteria [Fun 96.37
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 95.44
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 89.83
PLN02757154 sirohydrochlorine ferrochelatase 82.46
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.6e-77  Score=579.48  Aligned_cols=324  Identities=36%  Similarity=0.688  Sum_probs=281.9

Q ss_pred             hhccCCccEEEEcCCcccccCCCCCcccccCCCCCCCcccCCCCCCcccCCCCCchhHHhhhccCCCCCCCCCCCCCCCC
Q 017181           30 IVRLAEGRAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNG  109 (376)
Q Consensus        30 ~~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~p~~~~~GRfsnG~~~~d~la~~lg~~~~~p~y~~~~~~~  109 (376)
                      +...+.+++|||||||++|+||++++.+..+++++|||++||+++|+||||||++|+||||+.||++..+|||+++..++
T Consensus        21 ~~~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~  100 (351)
T PLN03156         21 AETCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNI  100 (351)
T ss_pred             hcccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCc
Confidence            55567799999999999999999877666678899999999977899999999999999999999933489999886656


Q ss_pred             cccccCccccccccccccCCCcccccccCHHHHHHHHHHHHHHHHHhhchHHHHHhhhccEEEEEeccchhhhhhhcccc
Q 017181          110 QRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPY  189 (376)
Q Consensus       110 ~~~~~g~NfA~gGA~v~~~~~~~~~~~~~l~~Qi~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~  189 (376)
                      .++.+|+|||+||+++++.+.. ....++|..||++|.++++++....|.+.++...+++||+||||+|||+..|...  
T Consensus       101 ~~~~~GvNFA~agag~~~~~~~-~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~--  177 (351)
T PLN03156        101 SDFATGVCFASAGTGYDNATSD-VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTF--  177 (351)
T ss_pred             hhhcccceeecCCccccCCCcc-ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhcc--
Confidence            7889999999999998765442 2235789999999999988888777765566678999999999999998655421  


Q ss_pred             CCcCCCCChhHHHHHHHHHHHHHHHHHHHhCCcEEEEeCCCCCCccchhhhccC-CCCCChHHHHHHHHHHHHHHHHHHH
Q 017181          190 SARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRG-SNGGCSAELQRATSLYNPQLEQMLQ  268 (376)
Q Consensus       190 ~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~vv~~lpplg~~P~~~~~~~-~~~~~~~~~~~~~~~~N~~L~~~l~  268 (376)
                      ........++++++.+++.+.+.|++||++|||+|+|+|+||+||+|..+.... ...+|.+.+|.+++.||++|+++++
T Consensus       178 ~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~  257 (351)
T PLN03156        178 PGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVT  257 (351)
T ss_pred             ccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            112223457889999999999999999999999999999999999999765421 2457999999999999999999999


Q ss_pred             HHHHhcCCceEEEeecchhHHHHhhCcccCCCcccCccccCCcCCCCccccCCCC-CCCCCCCCceeeCCCChhHHHHHH
Q 017181          269 GINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALS-NLCPNRQLYAFWDPFHPSEKANRL  347 (376)
Q Consensus       269 ~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~-~~C~~p~~ylfwD~vHPT~~~h~~  347 (376)
                      +|++++|+++|+++|+|+++.++++||++|||++++++||+.|.++....|++.. ..|++|++|+|||++|||+++|++
T Consensus       258 ~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~  337 (351)
T PLN03156        258 KLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQI  337 (351)
T ss_pred             HHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHH
Confidence            9999999999999999999999999999999999999999988888888898765 589999999999999999999999


Q ss_pred             HHHHHHcCC
Q 017181          348 IVEQIFSGS  356 (376)
Q Consensus       348 iA~~~~~~~  356 (376)
                      ||+.++++.
T Consensus       338 iA~~~~~~l  346 (351)
T PLN03156        338 IANHVVKTL  346 (351)
T ss_pred             HHHHHHHHH
Confidence            999999864

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information
>PLN02757 sirohydrochlorine ferrochelatase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 2e-81
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  260 bits (664), Expect = 2e-81
 Identities = 70/335 (20%), Positives = 111/335 (33%), Gaps = 25/335 (7%)

Query: 38  AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIG-QS 96
              VFGDSL D+G     A  A + +       PT++       G   P ++  ++G   
Sbjct: 17  TLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAP 76

Query: 97  EAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAV 156
                  SP    Q +  G N+A  G                   + D      R    V
Sbjct: 77  GDLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANG-SLIERDNTLLRSRDGYLV 135

Query: 157 IGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRL 216
             A+Q       AL  IT GGNDF+    L    A+     L + V+            L
Sbjct: 136 DRARQGLGADPNALYYITGGGNDFLQGRILNDVQAQQAAGRLVDSVQ-----------AL 184

Query: 217 YELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQGINRKIGQ 276
            + GAR ++V     LG  PA        G       + +  +N +L   L      +  
Sbjct: 185 QQAGARYIVVWLLPDLGLTPATFG-----GPLQPFASQLSGTFNAELTAQLSQAGANV-- 237

Query: 277 TVFIAANTQQTHMDFVSNPQAYGFTTAK--VACCGQGPNNGLGLCTALSNLCPNRQLYAF 334
              I  N      + ++NP ++G    +  +  C  G    +     ++   P+     F
Sbjct: 238 ---IPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLF 294

Query: 335 WDPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVM 369
            D  HP+    RLI +  +S  +       L  + 
Sbjct: 295 NDSVHPTITGQRLIADYTYSLLSAPWELTLLPEMA 329

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.7
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.54
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.53
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.48
2hsj_A214 Putative platelet activating factor; structr genom 99.47
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 99.45
1vjg_A218 Putative lipase from the G-D-S-L family; structura 99.41
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.38
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 99.34
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 99.3
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 99.27
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 99.23
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 99.15
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 99.13
3bzw_A274 Putative lipase; protein structure initiative II, 99.13
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.13
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 99.12
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 99.01
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 98.97
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 98.96
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 98.91
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 98.9
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 98.83
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 98.7
4i8i_A271 Hypothetical protein; 5-stranded beta sheet flanke 82.28
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=1.2e-60  Score=497.50  Aligned_cols=302  Identities=23%  Similarity=0.266  Sum_probs=240.0

Q ss_pred             ccCCccEEEEcCCcccccCCCCCcccccCC--CC-CCCcccCCCCCCcccCC-CCCchhHHhhhccCCCC-CCCCCCCCC
Q 017181           32 RLAEGRAFFVFGDSLVDSGNNNYLATTARA--DA-PPYGIDFPTHRPTGRFS-NGFNIPDIISQRIGQSE-APLPYLSPE  106 (376)
Q Consensus        32 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~--~~-~Pyg~~~p~~~~~GRfs-nG~~~~d~la~~lg~~~-~~p~y~~~~  106 (376)
                      .+++|++||+||||+||+||..........  .+ .|.|.+|    ++|||| ||++|+||||+.||+|. +++||+++.
T Consensus        11 ~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~~----~~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~   86 (632)
T 3kvn_X           11 APSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTY----QNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPV   86 (632)
T ss_dssp             CCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSSC----CTTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHH
T ss_pred             CCCCCccEEEEccccccCCCcccccCCcCCccccccCCCCcc----ccCcccccCCchHHHHHHHcCCCccccCcccccc
Confidence            467899999999999999998533221110  11 1226555    489999 99999999999999972 134555422


Q ss_pred             CCCcccccCcccccccccc---ccCCCcccccccCHHHHHHHHH-HHHHHHHHhhchHHHHHhhhccEEEEEeccchhhh
Q 017181          107 LNGQRLLIGANFASAGIGI---LNDTGIQFVNIIRMFRQLDYFA-EYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVN  182 (376)
Q Consensus       107 ~~~~~~~~g~NfA~gGA~v---~~~~~~~~~~~~~l~~Qi~~f~-~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~  182 (376)
                      ..+.++.+|+|||+|||++   ++..+.....+++|..||.+|+ .+++++...     .....+++||+||||+|||+.
T Consensus        87 ~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~~-----~~~~~~~sL~~v~iG~ND~~~  161 (632)
T 3kvn_X           87 NAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQ-----GLGADPNALYYITGGGNDFLQ  161 (632)
T ss_dssp             HHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHTT-----TCCCCTTSEEEECCSHHHHHT
T ss_pred             ccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhhc-----cCccCCCCEEEEEEechhhhc
Confidence            2256788999999999996   4443332334566777777665 444333211     224579999999999999986


Q ss_pred             hhhccccCCcCCCCChhHHHHHHHHHHHHHHHHHHHhCCcEEEEeCCCCCCccchhhhccCCCCCChHHHHHHHHHHHHH
Q 017181          183 NYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQ  262 (376)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~~~~~~~N~~  262 (376)
                      .+..           .+++++.+++++.++|++||++|||+|+|+++||+||+|...     ..+|.+.+|++++.||++
T Consensus       162 ~~~~-----------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~-----~~~c~~~~n~~~~~~N~~  225 (632)
T 3kvn_X          162 GRIL-----------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF-----GGPLQPFASQLSGTFNAE  225 (632)
T ss_dssp             TCCC-----------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT-----TSTTHHHHHHHHHHHHHH
T ss_pred             cccc-----------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc-----CCCchHHHHHHHHHHHHH
Confidence            5432           236789999999999999999999999999999999999953     347999999999999999


Q ss_pred             HHHHHHHHHHhcCCceEEEeecchhHHHHhhCcccCCCcccC--ccccCCcCCCCccccCCC-----CCCCCCCCCceee
Q 017181          263 LEQMLQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAK--VACCGQGPNNGLGLCTAL-----SNLCPNRQLYAFW  335 (376)
Q Consensus       263 L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~nP~~yGf~n~~--~~Cc~~g~~~~~~~C~~~-----~~~C~~p~~ylfw  335 (376)
                      |++++++|+     .+|+++|+|+++.++++||++|||++++  ++||+.+.     .|++.     ..+|+||++|+||
T Consensus       226 L~~~l~~l~-----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~-----~C~~~~~~~~~~~C~~~~~y~fw  295 (632)
T 3kvn_X          226 LTAQLSQAG-----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN-----GCTMNPTYGINGSTPDPSKLLFN  295 (632)
T ss_dssp             HHHHHHHHC-----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT-----TSCBCTTTSTTSSSCCGGGCSBS
T ss_pred             HHHHHHhCC-----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC-----ccCCcccccccccCCCccceEEe
Confidence            999999985     4799999999999999999999999875  69999863     68764     3689999999999


Q ss_pred             CCCChhHHHHHHHHHHHHcCCCCccCCCChhHhhcC
Q 017181          336 DPFHPSEKANRLIVEQIFSGSTNYMTPMNLSTVMAL  371 (376)
Q Consensus       336 D~vHPT~~~h~~iA~~~~~~~~~~~~P~n~~~l~~~  371 (376)
                      |++||||++|++||+.++++   +..|+++++|++.
T Consensus       296 D~~HpTe~~~~~ia~~~~~~---~~~P~~~~~l~~~  328 (632)
T 3kvn_X          296 DSVHPTITGQRLIADYTYSL---LSAPWELTLLPEM  328 (632)
T ss_dssp             SSSCBCHHHHHHHHHHHHHH---HHTHHHHTTHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHhc---cCCCccHHHHHHH
Confidence            99999999999999999995   6799999998753
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 376
d1esca_302 c.23.10.1 (A:) Esterase {Streptomyces scabies [Tax 0.001
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Length = 302 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 44/327 (13%), Positives = 81/327 (24%), Gaps = 53/327 (16%)

Query: 41  VFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPL 100
            FGDS            TA     P            +    +  P + ++ +      L
Sbjct: 7   FFGDSY-----------TANFGIAPVTNQDSERGWCFQAKENY--PAVATRSLADKGITL 53

Query: 101 PYLSPELNGQRLLIGANFASAG--IGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIG 158
                          A+ +  G  I    +          +  Q D   +  +     +G
Sbjct: 54  DVQ------------ADVSCGGALIHHFWEKQELPFGAGELPPQQDALKQDTQLTVGSLG 101

Query: 159 ------AQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKL 212
                  +  +Q  +       + G+    +                 ++          
Sbjct: 102 GNTLGFNRILKQCSDELRKPSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAE 161

Query: 213 LMRLYEL------GARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQM 266
           L  L +        A+RVLV     +     +                      P L+Q+
Sbjct: 162 LEELLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDA-LPVLDQI 220

Query: 267 LQGINRKIGQTVFIAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLC 326
            + +N  + +             DFV     Y  T A  AC G     G  L  +   L 
Sbjct: 221 QKRLNDAMKKAA------ADGGADFVD---LYAGTGANTACDGADRGIGGLLEDSQLELL 271

Query: 327 PNRQLYAFWDPFHPSEKANRLIVEQIF 353
                       HP++K   +  +Q+ 
Sbjct: 272 G----TKIPWYAHPNDKGRDIQAKQVA 294

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.66
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 99.39
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 99.37
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 99.35
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 99.21
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 99.17
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 99.09
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 98.87
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 98.83
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 98.73
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 98.7
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.66  E-value=1.7e-16  Score=146.90  Aligned_cols=220  Identities=15%  Similarity=0.037  Sum_probs=117.9

Q ss_pred             CCchhHHhhhccCCCCCCCCCCCCCCCCcccccCccccccccccccCCCccc--ccccCHHHHHHHHHHHHHHHHHhhch
Q 017181           82 GFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQF--VNIIRMFRQLDYFAEYQRRVSAVIGA  159 (376)
Q Consensus        82 G~~~~d~la~~lg~~~~~p~y~~~~~~~~~~~~g~NfA~gGA~v~~~~~~~~--~~~~~l~~Qi~~f~~~~~~~~~~~g~  159 (376)
                      +..|+++||+.++... ..           ...-.|||.+||++.+-.....  ........|++..             
T Consensus        35 ~~~y~~~la~~l~~~~-~~-----------~~~~~n~a~sGatt~~~~~~~~~~~~~~~~~~Q~~~l-------------   89 (302)
T d1esca_          35 KENYPAVATRSLADKG-IT-----------LDVQADVSCGGALIHHFWEKQELPFGAGELPPQQDAL-------------   89 (302)
T ss_dssp             TTCHHHHHHHHHHTTT-CE-----------EEEEEECCCTTCCGGGGTSCEECGGGCCEECCGGGGC-------------
T ss_pred             CcCHHHHHHHHhcccc-CC-----------ceeEEEeeecccchhhhhccccccccccchhhhhhhc-------------
Confidence            6789999999998753 11           1233699999999654332211  1111222344321             


Q ss_pred             HHHHHhhhccEEEEEeccchhhhhhhccc-c--------CCc------C---------CCCC----hhHHHHHHHHHHHH
Q 017181          160 QQARQLVNRALVLITVGGNDFVNNYYLVP-Y--------SAR------S---------RQFT----LPNYVKYIISEYRK  211 (376)
Q Consensus       160 ~~~~~~~~~sL~~i~iG~ND~~~~~~~~~-~--------~~~------~---------~~~~----~~~~v~~~v~~~~~  211 (376)
                           ...-+|++|+||+||+........ .        ...      .         ....    ....++.+..++.+
T Consensus        90 -----~~~~dlVtl~iGgND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  164 (302)
T d1esca_          90 -----KQDTQLTVGSLGGNTLGFNRILKQCSDELRKPSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEE  164 (302)
T ss_dssp             -----CTTCCEEEECCCHHHHTHHHHHHHTCTTTTSSCSSCCCCSSTTSCGGGHHHHTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCCCEEEEecCCcccchhhhhhhhhhccccccccccccccccccccccccccccchhhhhhHHHHHHHHHHHHH
Confidence                 124579999999999853211100 0        000      0         0000    11233344455555


Q ss_pred             HHHHHHHhC-CcEEEEeCCCCCCc---cchhhhccC--------CCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 017181          212 LLMRLYELG-ARRVLVTGTGPLGC---VPAELALRG--------SNGGCSAELQRATSLYNPQLEQMLQGINRKIGQTVF  279 (376)
Q Consensus       212 ~v~~L~~~G-ar~~vv~~lpplg~---~P~~~~~~~--------~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i  279 (376)
                      .+++|.+.. --+|++++.|++.-   .|.......        ....-...++.+.+.+|..+++..+       ...+
T Consensus       165 ~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~-------~~~v  237 (302)
T d1esca_         165 LLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAA-------DGGA  237 (302)
T ss_dssp             HHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHH-------TTTC
T ss_pred             HHHHHHHHCCCCeEEEecCcccccccCCcccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHH-------HcCC
Confidence            666665443 34688888886421   111000000        0112244567777778877765432       2347


Q ss_pred             EEeecchhHHHHhhCcccCCCcccCccccCCcCCCCccccCCCCCCCCCCCCceeeCCCChhHHHHHHHHHHHHcC
Q 017181          280 IAANTQQTHMDFVSNPQAYGFTTAKVACCGQGPNNGLGLCTALSNLCPNRQLYAFWDPFHPSEKANRLIVEQIFSG  355 (376)
Q Consensus       280 ~~~D~~~~~~~i~~nP~~yGf~n~~~~Cc~~g~~~~~~~C~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~  355 (376)
                      .++|++..+.       .+++-...++|...          .......++.++++||.+|||++||++||+.+.+.
T Consensus       238 ~~vd~~~~f~-------~~~~c~~~~~~~~~----------~~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~i~~~  296 (302)
T d1esca_         238 DFVDLYAGTG-------ANTACDGADRGIGG----------LLEDSQLELLGTKIPWYAHPNDKGRDIQAKQVADK  296 (302)
T ss_dssp             EEECTGGGCT-------TSSTTSTTSCSBCC----------SSSEEEEESSSCEEECSSCBCHHHHHHHHHHHHHH
T ss_pred             EEEechhhhc-------cccccccccccccc----------cccccccccccccccCCcCCCHHHHHHHHHHHHHH
Confidence            7889988753       11111111111111          01112235778999999999999999999999874
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure