Citrus Sinensis ID: 017182

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370------
MTIVTISKIMAEKDSNDDRKSELEAFDDSKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSDSGNCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRDSLYCVMAPPPPNPEELPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKLSK
ccEEccccccccccccccHHHHHHHcccccccHHHHHHccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHccccccccEEEEcccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccEEEEEEEccccccccccccccccccccccEEEEEcccccEEEEEccEEEEcccccccEEEEcccEEEEEEcccccccccEEEEcccccEEEEEEEccccccccccccEEEccccccccccccccccccHHHHHHHHHHcccccccccccccccc
ccEEcccccccccccccccHHHHHHcccccccHHHHHHccccccccHEEcccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEccccEcccccccHHHHEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccEEEEEEEcccccccccccEEEEcccccEEEEEEcccccEEEEEccEEEEcccccccEEEEEcHHHHHHcccccccccEEEcccccccEEEEEEEEcccccccccccEEccHHHHcccccccccccccHHHHHHHHHHccccccccHHHEEccc
MTIVTISKIMAekdsnddrkseleafddsktgvkglvdsgaakvprifiheqnklehksdsgncqnftipiidfqdidrdaSARCEIIDKVRKACEKWGFfqvvnrgipLNILEEIINAVRKFHELDADvkkefysrdetrsmIYNTNFDFYQASAANWRDSlycvmappppnpeelpaVCRSVMMDYSKEVMKFGLTVFELMSEALglnsshlkdlgCAERLYLIghyypacpepeltlglskhtdsgFLTVVLQDQmgglqvlheddwvdvepvsgslilnvgdmtqlisndkfKSVYHRVLAknngprisVACFFRthleegndsrlygpIEQLlsqisppiyrettAKDYVKYIYSkgldgtsglqhlklsk
mtivtiskimaekdsnddrkseleafddsktgvkGLVDSGAAKVPRIFIHEqnklehksdsgncQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGffqvvnrgipLNILEEIINAVRKFHELDADVKKEfysrdetrsmiYNTNFDFYQASAANWRDSLYCVMAPPPPNPEELPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKgldgtsglqhlklsk
MTIVTISKIMAEKDSNDDRKSELEAFDDSKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSDSGNCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRDSLYCVMAppppnpeelpAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKLSK
****************************************AAKVPRIFIHE**********GNCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRDSLYCVMA********LPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLD************
**********************LEAFDDSKTGVKGLVDSGAAKVPRIFIHE***************FTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKE******T*SMIYNTNFDFYQASAANWRDSLYCVMAPPPPNPEELPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKLS*
MTIVTISKIMAEKDSNDDRKSELEAFDDSKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSDSGNCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRDSLYCVMAPPPPNPEELPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKLSK
********IMAEKDSNDDRKSELEAFDDSKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSDSGNCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRDSLYCVMAPPPPNPEELPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKLS*
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MTIVTISKIMAEKDSNDDRKSELEAFDDSKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSDSGNCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRDSLYCVMAPPPPNPEELPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKLSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query376 2.2.26 [Sep-21-2011]
Q84MB3365 1-aminocyclopropane-1-car yes no 0.941 0.969 0.551 1e-120
Q9LTH7366 1-aminocyclopropane-1-car no no 0.933 0.959 0.535 1e-115
Q8H1S4369 1-aminocyclopropane-1-car no no 0.965 0.983 0.531 1e-110
Q9LTH8364 1-aminocyclopropane-1-car no no 0.960 0.991 0.521 1e-109
O04847401 Deacetoxyvindoline 4-hydr N/A no 0.960 0.900 0.483 1e-107
Q9C5K7369 1-aminocyclopropane-1-car no no 0.944 0.962 0.534 1e-107
P93824360 1-aminocyclopropane-1-car no no 0.936 0.977 0.509 1e-106
Q9M2C4370 1-aminocyclopropane-1-car no no 0.938 0.954 0.509 1e-103
P10967363 1-aminocyclopropane-1-car N/A no 0.930 0.964 0.511 1e-102
Q9LSW6362 1-aminocyclopropane-1-car no no 0.952 0.988 0.490 1e-101
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function desciption
 Score =  432 bits (1111), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 197/357 (55%), Positives = 268/357 (75%), Gaps = 3/357 (0%)

Query: 18  DRKSELEAFDDSKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSDSGNCQNFTIPIIDFQDI 77
           DR + L+AFD++KTGVKGL+D+G  ++P IF      L       +  +F+IP ID +  
Sbjct: 12  DRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPP-SSSDFSIPTIDLKGG 70

Query: 78  DRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSR 137
             D+  R  +++K+  A EKWGFFQV+N GIP+++LE++I+ +R+FHE D +VKK FYSR
Sbjct: 71  GTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSR 130

Query: 138 DETRSMIYNTNFDFYQASAANWRDSLYCVMAPPPPNPEELPAVCRSVMMDYSKEVMKFGL 197
           D    M+Y++NFD + + AANWRD+L C  AP PP PE+LPA C  +M++YSKEVMK G 
Sbjct: 131 DPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGK 190

Query: 198 TVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQD 257
            +FEL+SEALGLN++HLKD+ C   L L+GHYYP CP+P+LTLGL+KH+D+ FLT++LQD
Sbjct: 191 LLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQD 250

Query: 258 QMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACF 317
            +GGLQVLH+  WVDV PV G+L++NVGD+ QLI+NDKF SV HRVLA   GPRISVACF
Sbjct: 251 HIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACF 310

Query: 318 FRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKL 374
           F ++L    + R+YGPI+++LS+ +PP YR+TT  +Y K+  SKG DGTSGL +LK+
Sbjct: 311 FSSYLMA--NPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365

Arabidopsis thaliana (taxid: 3702)
>sp|Q9LTH7|ACH12_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 12 OS=Arabidopsis thaliana GN=At5g59540 PE=2 SV=1 Back     alignment and function description
>sp|Q8H1S4|ACCH3_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTH8|ACH11_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description
>sp|Q9C5K7|ACCH2_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1 Back     alignment and function description
>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis thaliana GN=At1g04350 PE=2 SV=1 Back     alignment and function description
>sp|Q9M2C4|ACCH8_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 8 OS=Arabidopsis thaliana GN=At3g61400 PE=2 SV=1 Back     alignment and function description
>sp|P10967|ACCH3_SOLLC 1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1 Back     alignment and function description
>sp|Q9LSW6|ACH10_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana GN=At5g43450 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
147822811373 hypothetical protein VITISV_042886 [Viti 0.992 1.0 0.622 1e-141
225433035373 PREDICTED: 1-aminocyclopropane-1-carboxy 0.992 1.0 0.622 1e-141
255576826 652 Desacetoxyvindoline 4-hydroxylase, putat 0.944 0.544 0.675 1e-140
147845654373 hypothetical protein VITISV_017626 [Viti 0.973 0.981 0.629 1e-139
359477763 684 PREDICTED: 1-aminocyclopropane-1-carboxy 0.973 0.535 0.626 1e-139
147787952373 hypothetical protein VITISV_000872 [Viti 0.970 0.978 0.622 1e-138
255576828364 Desacetoxyvindoline 4-hydroxylase, putat 0.946 0.978 0.625 1e-133
224117868368 predicted protein [Populus trichocarpa] 0.954 0.975 0.596 1e-132
359477771 680 PREDICTED: 1-aminocyclopropane-1-carboxy 0.984 0.544 0.577 1e-129
359477716 673 PREDICTED: 1-aminocyclopropane-1-carboxy 0.973 0.543 0.572 1e-128
>gi|147822811|emb|CAN66006.1| hypothetical protein VITISV_042886 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/374 (62%), Positives = 301/374 (80%), Gaps = 1/374 (0%)

Query: 1   MTIVTISKIMAEKDSNDDRKSELEAFDDSKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSD 60
           M   +  +I A K S+ DRKSEL++FDDSK GVKGL+D+G  ++PR+FI+EQ+K +    
Sbjct: 1   MVSSSSDEIQAGKASDYDRKSELKSFDDSKLGVKGLLDAGLTQIPRMFINEQHKTDMTWG 60

Query: 61  SGNCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAV 120
           S      ++PI+DF+ +D+DA+ R +II KV +ACEKWGFFQVVN GIP ++L ++I+ +
Sbjct: 61  SRESSPESVPILDFKGMDKDAALRTQIIKKVGEACEKWGFFQVVNHGIPESVLNDMIDGI 120

Query: 121 RKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRDSLYCVMAPPPPNPEELPAV 180
           R+FHE DA+ KKE+YSRD  + + +N+NFD YQA  ANWRDSL CVMAP PP PE+LPAV
Sbjct: 121 RRFHEQDAETKKEYYSRDSQKKVRFNSNFDLYQARMANWRDSLACVMAPNPPLPEQLPAV 180

Query: 181 CRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTL 240
           CR ++M+YS++VMK GLT+FEL+SEALGLN +HLKD+ CAE L+L+GHYYPACPEPELTL
Sbjct: 181 CRDIVMEYSEQVMKLGLTLFELLSEALGLNPNHLKDMECAEGLFLLGHYYPACPEPELTL 240

Query: 241 GLSKHTDSGFLTVVLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVY 300
           G S HTDS F T++LQDQMGGLQVLHED WVDV P+ G+L++N+GD+ QL+SND+FKS++
Sbjct: 241 GTSSHTDSDFFTILLQDQMGGLQVLHEDQWVDVPPIPGALVINMGDLLQLVSNDRFKSIF 300

Query: 301 HRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYS 360
           HRVLAKN GPRISVA FFR    E N+SRLYGPI++LLS+ +PPIYRETT  +++ Y +S
Sbjct: 301 HRVLAKNVGPRISVASFFRKSHRE-NNSRLYGPIKELLSEENPPIYRETTVDEFLTYYFS 359

Query: 361 KGLDGTSGLQHLKL 374
           KGLDG S L H KL
Sbjct: 360 KGLDGNSSLPHFKL 373

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225433035|ref|XP_002284663.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576826|ref|XP_002529299.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] gi|223531223|gb|EEF33068.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147845654|emb|CAN80594.1| hypothetical protein VITISV_017626 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477763|ref|XP_002284676.2| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147787952|emb|CAN67227.1| hypothetical protein VITISV_000872 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576828|ref|XP_002529300.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] gi|223531224|gb|EEF33069.1| Desacetoxyvindoline 4-hydroxylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224117868|ref|XP_002317688.1| predicted protein [Populus trichocarpa] gi|222860753|gb|EEE98300.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477771|ref|XP_003632020.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477716|ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query376
TAIR|locus:2009130365 AT1G06620 [Arabidopsis thalian 0.941 0.969 0.532 2.3e-103
TAIR|locus:2148303366 AT5G59540 [Arabidopsis thalian 0.965 0.991 0.508 7.1e-100
TAIR|locus:2009175369 AT1G06650 [Arabidopsis thalian 0.965 0.983 0.517 1.4e-96
TAIR|locus:2148403364 AT5G59530 [Arabidopsis thalian 0.960 0.991 0.5 6.8e-95
TAIR|locus:2009210369 AT1G06640 [Arabidopsis thalian 0.944 0.962 0.518 7.8e-94
TAIR|locus:2052781358 AT2G30830 [Arabidopsis thalian 0.936 0.983 0.505 1.5e-92
TAIR|locus:2018349360 AT1G04350 [Arabidopsis thalian 0.936 0.977 0.487 8.1e-92
TAIR|locus:2098876370 AT3G61400 [Arabidopsis thalian 0.938 0.954 0.493 5.1e-90
TAIR|locus:2040045359 AT2G25450 [Arabidopsis thalian 0.949 0.994 0.479 1.4e-89
TAIR|locus:2020798398 2A6 [Arabidopsis thaliana (tax 0.954 0.902 0.465 2.2e-89
TAIR|locus:2009130 AT1G06620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
 Identities = 190/357 (53%), Positives = 260/357 (72%)

Query:    18 DRKSELEAFDDSKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSDSGNCQNFTIPIIDFQDI 77
             DR + L+AFD++KTGVKGL+D+G  ++P IF      L       +  +F+IP ID +  
Sbjct:    12 DRSTLLKAFDETKTGVKGLIDAGITEIPSIFRAPPATLTSPKPPSS-SDFSIPTIDLKGG 70

Query:    78 DRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSR 137
               D+  R  +++K+  A EKWGFFQV+N GIP+++LE++I+ +R+FHE D +VKK FYSR
Sbjct:    71 GTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSR 130

Query:   138 DETRSMIYNTNFDFYQASAANWRDSLYCVMAXXXXXXXXXXAVCRSVMMDYSKEVMKFGL 197
             D    M+Y++NFD + + AANWRD+L C  A          A C  +M++YSKEVMK G 
Sbjct:   131 DPASKMVYSSNFDLFSSPAANWRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGK 190

Query:   198 TVFELMSEALGLNSSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQD 257
              +FEL+SEALGLN++HLKD+ C   L L+GHYYP CP+P+LTLGL+KH+D+ FLT++LQD
Sbjct:   191 LLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQD 250

Query:   258 QMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACF 317
              +GGLQVLH+  WVDV PV G+L++NVGD+ QLI+NDKF SV HRVLA   GPRISVACF
Sbjct:   251 HIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACF 310

Query:   318 FRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKL 374
             F ++L    + R+YGPI+++LS+ +PP YR+TT  +Y K+  SKG DGTSGL +LK+
Sbjct:   311 FSSYLMA--NPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009414 "response to water deprivation" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA
GO:0042538 "hyperosmotic salinity response" evidence=RCA
TAIR|locus:2148303 AT5G59540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009175 AT1G06650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148403 AT5G59530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009210 AT1G06640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052781 AT2G30830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2018349 AT1G04350 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098876 AT3G61400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040045 AT2G25450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020798 2A6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84MB3ACCH1_ARATHNo assigned EC number0.55180.94140.9698yesno
P10967ACCH3_SOLLCNo assigned EC number0.51110.93080.9641N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.14.11.15LOW CONFIDENCE prediction!
3rd Layer1.14.110.921
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-70
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 1e-69
PLN02947374 PLN02947, PLN02947, oxidoreductase 1e-67
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 7e-61
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-56
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 5e-54
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 3e-48
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 3e-47
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-46
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 2e-45
PLN02904357 PLN02904, PLN02904, oxidoreductase 3e-45
PLN02216357 PLN02216, PLN02216, protein SRG1 6e-45
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-44
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 3e-43
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-43
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 8e-41
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 1e-40
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-38
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-36
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-33
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-32
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 4e-29
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 3e-26
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 4e-24
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 6e-24
PLN02485329 PLN02485, PLN02485, oxidoreductase 6e-20
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 2e-14
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 6e-09
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  223 bits (570), Expect = 2e-70
 Identities = 107/314 (34%), Positives = 177/314 (56%), Gaps = 24/314 (7%)

Query: 59  SDSGNCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVNRGIPLNILEEIIN 118
           S+   C+N  +P+ID    DR       ++ ++  AC ++GFFQV+N G+   ++E+++ 
Sbjct: 30  SEVSTCEN--VPVIDLGSPDRAQ-----VVQQIGDACRRYGFFQVINHGVSAELVEKMLA 82

Query: 119 AVRKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRD--SLYC-----VMAPPP 171
              +F  L  + K + YS D T++M  +T+F+  +    NWRD   L+C      +   P
Sbjct: 83  VAHEFFRLPVEEKMKLYSDDPTKTMRLSTSFNVRKEKVHNWRDYLRLHCYPLDKYVPEWP 142

Query: 172 PNPEELPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGCAERLYLIGHYYP 231
            NP       + ++  Y +EV + G  + E +SE+LGL   ++K++   +  ++  +YYP
Sbjct: 143 SNPPSF----KEIVSTYCREVRELGFRLQEAISESLGLEKDYIKNVLGEQGQHMAVNYYP 198

Query: 232 ACPEPELTLGLSKHTDSGFLTVVLQDQ-MGGLQVLHEDDWVDVEPVSGSLILNVGDMTQL 290
            CPEPELT GL  HTD   LT++LQDQ + GLQVL +  WV V P  G+ ++N+GD  Q 
Sbjct: 199 PCPEPELTYGLPAHTDPNALTILLQDQQVAGLQVLKDGKWVAVNPHPGAFVINIGDQLQA 258

Query: 291 ISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLSQISPPIYRETT 350
           +SN ++KSV+HR +   +  R+SVA F    L   +D+ +  P ++L    +  +YR+ T
Sbjct: 259 LSNGRYKSVWHRAVVNTDKERMSVASF----LCPCDDAVI-SPAKKLTDDGTAAVYRDFT 313

Query: 351 AKDYVKYIYSKGLD 364
             +Y K  +S+ LD
Sbjct: 314 YAEYYKKFWSRNLD 327

Length = 337
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 376
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02704335 flavonol synthase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02997325 flavonol synthase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PLN03176120 flavanone-3-hydroxylase; Provisional 99.88
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.88
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.59
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.7
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 93.11
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 86.95
TIGR02466201 conserved hypothetical protein. This family consis 84.68
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 81.35
>PLN02947 oxidoreductase Back     alignment and domain information 
Probab=100.00  E-value=6.6e-85  Score=639.77  Aligned_cols=337  Identities=36%  Similarity=0.618  Sum_probs=295.4

Q ss_pred             ccchHHHHhCCCCCCCCccccCCCCcCcCCC---CC-CCCCCccceeeCCCCCCChhHHHHHHHHHHHHHHhcCeEEEEe
Q 017182           30 KTGVKGLVDSGAAKVPRIFIHEQNKLEHKSD---SG-NCQNFTIPIIDFQDIDRDASARCEIIDKVRKACEKWGFFQVVN  105 (376)
Q Consensus        30 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~---~~-~~~~~~iPvIDls~l~~~~~~~~~~~~~l~~A~~~~GFF~v~n  105 (376)
                      ..|||.|+++|+.+||++|++|++++|....   .. ... .+||||||+.+.+  ..+..++++|++||++||||||+|
T Consensus        25 ~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~-~~iPvIDls~l~~--~~~~~~~~~l~~Ac~~~GFF~v~n  101 (374)
T PLN02947         25 QKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGN-LKLPVIDLAELRG--SNRPHVLATLAAACREYGFFQVVN  101 (374)
T ss_pred             ecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCC-CCCCeEECcccCC--ccHHHHHHHHHHHHHHCcEEEEEc
Confidence            4599999999999999999999998875321   00 133 5799999998852  346778999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCcccccccccccccccCCcccccccccCCCCCCCCCC---chhhh
Q 017182          106 RGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMIYNTNFDFYQASAANWRDSLYCVMAPPPPNPEEL---PAVCR  182 (376)
Q Consensus       106 hGv~~~l~~~~~~~~~~FF~lP~EeK~~~~~~~~~~~~gy~~~~~~~~~~~~dw~d~~~~~~~p~~~~~~~~---P~~fr  182 (376)
                      ||||.++++++++.+++||+||.|+|+++...+.....||+..+....+...+|+|.+.+...|....++.|   |+.||
T Consensus       102 HGIp~~li~~~~~~~~~FF~LP~eeK~k~~~~~~~~~~gyg~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~WP~~~~~fr  181 (374)
T PLN02947        102 HGVPSEVIGGMIDVARRFFELPLEERAKYMSADMRAPVRYGTSFNQNKDAVFCWRDFLKLVCHPLSDVLPHWPSSPADLR  181 (374)
T ss_pred             CCCCHHHHHHHHHHHHHHhcCCHHHHhhhhcccCCCCeeeccccccccccccCceeceeeecCCcccccccCccchHHHH
Confidence            999999999999999999999999999986544344567776554444567899999887666632222233   46899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcCCC---hhhhhhhcCCcceeeeeeecCCCCCccccCCcccCCCCCcEEEEeeCCC
Q 017182          183 SVMMDYSKEVMKFGLTVFELMSEALGLN---SSHLKDLGCAERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVVLQDQM  259 (376)
Q Consensus       183 ~~~~~y~~~~~~l~~~ll~~ls~~Lgl~---~~~~~~~~~~~~~~~r~~yYP~~~~~~~~~g~~~HtD~~~lTlL~qd~~  259 (376)
                      +++++|+++|.+|+.+||++|+++|||+   .++|.+.+....+.+|+|||||||+|+.++|+++|||+|+||||+||++
T Consensus       182 ~~~~~Y~~~~~~L~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrln~YPp~p~~~~~~G~~~HTD~g~lTlL~Qd~v  261 (374)
T PLN02947        182 KVAATYAKATKRLFLELMEAILESLGIVKRGSDELLEEFEAGSQMMVVNCYPACPEPELTLGMPPHSDYGFLTLLLQDEV  261 (374)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCCccchHHHHHHhcCcceeeeeecCCCCCCcccccCCCCccCCCceEEEEecCC
Confidence            9999999999999999999999999996   4566665555668899999999999999999999999999999999999


Q ss_pred             CCceeeeCCcEEEeccCCCeEEEEecchhhhhhcCccccceecccCCCCCCeeEEEEeeecCCCCCCCCceeeccccccC
Q 017182          260 GGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPIEQLLS  339 (376)
Q Consensus       260 ~GLqV~~~g~W~~V~p~pgalvVnvGD~Le~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~~~~~~i~Pl~~lv~  339 (376)
                      +||||+++|+|++|+|+||+|||||||+||+||||+|||++|||++++.++||||+||++|+.|     ++|+|+++|++
T Consensus       262 ~GLQV~~~g~Wi~V~p~pga~VVNvGD~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d-----~~i~Pl~~lv~  336 (374)
T PLN02947        262 EGLQIMHAGRWVTVEPIPGSFVVNVGDHLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLPFE-----RVVGPAPELVD  336 (374)
T ss_pred             CCeeEeECCEEEeCCCCCCeEEEEeCceeeeeeCCEEeccccccccCCCCCEEEEEEEecCCCC-----CEEeCChHhcC
Confidence            9999999999999999999999999999999999999999999999988899999999999985     99999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHcCCCCCCccccccc
Q 017182          340 QISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKL  374 (376)
Q Consensus       340 ~~~p~~y~~~~~~ey~~~~~~~~~~~k~~l~~~~~  374 (376)
                      +++|++|++++|+||++.++++...++..++.+||
T Consensus       337 ~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~~~~~  371 (374)
T PLN02947        337 EQNPRRYMDTDFATFLAYLASAEGKHKNFLESRKL  371 (374)
T ss_pred             CCCCCcCCCCCHHHHHHHHHHhccCchhhhhhhhc
Confidence            99999999999999999999999999999999887

>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-35
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-35
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 3e-34
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-31
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 3e-08
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 2e-06
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 163/339 (48%), Gaps = 19/339 (5%)
Query: 33  VKGLVDSGAAKVPRIFIHEQNKLEHKSD----SGNCQNFTIPIIDFQDIDRD-ASARCEI 87
           V+ L  SG   +P+ +I  + +LE  +D            +P ID ++I+ D    R   
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66
Query: 88  IDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMI--Y 145
           I++++KA   WG   ++N GIP +++E +  A  +F  L  + +KE Y+ D+    I  Y
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVE-EKEKYANDQATGKIQGY 125
Query: 146 NTNFDFYQASAANWRDSLYCVMAXXXXXXXXXXAVCRS----VMMDYSKEVMKFGLTVFE 201
            +      +    W D  + +                S       +Y+K +      VF+
Sbjct: 126 GSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFK 185
Query: 202 LMSEALGLNSSHL-KDLGCAERLYLIG--HYYPACPEPELTLGLSKHTDSGFLTVVLQDQ 258
            +S  LGL    L K++G  E L L    +YYP CP+PEL LG+  HTD   LT +L + 
Sbjct: 186 ALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNM 245
Query: 259 MGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFF 318
           + GLQ+ +E  WV  + V  S+++++GD  +++SN K+KS+ HR L      RIS A F 
Sbjct: 246 VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF- 304
Query: 319 RTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKY 357
               E   D  +  P+ +++S  SP  +   T   ++++
Sbjct: 305 ---CEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH 340
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query376
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-140
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 1e-126
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 5e-71
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 3e-68
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 8e-66
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-62
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  401 bits (1033), Expect = e-140
 Identities = 95/359 (26%), Positives = 167/359 (46%), Gaps = 21/359 (5%)

Query: 31  TGVKGLVDSGAAKVPRIFIHEQNKLEHKSD----SGNCQNFTIPIIDFQDIDR-DASARC 85
             V+ L  SG   +P+ +I  + +LE  +D            +P ID ++I+  D   R 
Sbjct: 5   ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRE 64

Query: 86  EIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSMI- 144
             I++++KA   WG   ++N GIP +++E +  A  +F  L  + K+++ +   T  +  
Sbjct: 65  NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 124

Query: 145 YNTNFDFYQASAANWRDSLYCVMAPPPPNPEEL----PAVCRSVMMDYSKEVMKFGLTVF 200
           Y +      +    W D  + +  P       +    P+       +Y+K +      VF
Sbjct: 125 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVF 184

Query: 201 ELMSEALGLNSSHLKD-LGCAERLYLIG--HYYPACPEPELTLGLSKHTDSGFLTVVLQD 257
           + +S  LGL    L+  +G  E L L    +YYP CP+PEL LG+  HTD   LT +L +
Sbjct: 185 KALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 244

Query: 258 QMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACF 317
            + GLQ+ +E  WV  + V  S+++++GD  +++SN K+KS+ HR L      RIS A F
Sbjct: 245 MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 304

Query: 318 FRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTSGLQHLKLSK 376
                    D  +  P+ +++S  SP  +   T   ++++     L G    + +    
Sbjct: 305 CEP----PKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEH----KLFGKEQEELVSEKN 355
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 94.47
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.92
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 88.5
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 84.8
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 84.65
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 82.47
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 81.93
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=2e-83  Score=627.63  Aligned_cols=332  Identities=27%  Similarity=0.490  Sum_probs=293.6

Q ss_pred             cccchHHHHhCCCCCCCCccccCCCCcCcCCCC--CC---CCCCccceeeCCCCC-CChhHHHHHHHHHHHHHHhcCeEE
Q 017182           29 SKTGVKGLVDSGAAKVPRIFIHEQNKLEHKSDS--GN---CQNFTIPIIDFQDID-RDASARCEIIDKVRKACEKWGFFQ  102 (376)
Q Consensus        29 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~--~~---~~~~~iPvIDls~l~-~~~~~~~~~~~~l~~A~~~~GFF~  102 (376)
                      +.++||+|+++|+.+||++|++|+++++.....  ..   .. .+||||||+.+. +++..|.+++++|.+||++|||||
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~-~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~   81 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDG-PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH   81 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCS-CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccC-CCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence            457899999999999999999998887653210  00   12 469999999986 456678889999999999999999


Q ss_pred             EEeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCC-CCcccccccccccccccCCcccccccccCCC-----CCCCCC
Q 017182          103 VVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDE-TRSMIYNTNFDFYQASAANWRDSLYCVMAPP-----PPNPEE  176 (376)
Q Consensus       103 v~nhGv~~~l~~~~~~~~~~FF~lP~EeK~~~~~~~~-~~~~gy~~~~~~~~~~~~dw~d~~~~~~~p~-----~~~~~~  176 (376)
                      |+||||+.++++++++++++||+||.|+|+++..... ....||+........+..||+|+|++...|.     ..||..
T Consensus        82 v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~  161 (356)
T 1gp6_A           82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT  161 (356)
T ss_dssp             EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred             EeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence            9999999999999999999999999999999875543 4567898766555567789999999876552     234543


Q ss_pred             CchhhhhHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhcC---CcceeeeeeecCCCCCccccCCcccCCCCCcEEE
Q 017182          177 LPAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGC---AERLYLIGHYYPACPEPELTLGLSKHTDSGFLTV  253 (376)
Q Consensus       177 ~P~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~~~---~~~~~~r~~yYP~~~~~~~~~g~~~HtD~~~lTl  253 (376)
                       |+.||+++++|+++|.+|+.+||++|+++|||++++|.+.+.   ...+.+|+||||||++++..+|+++|||+|+|||
T Consensus       162 -~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTl  240 (356)
T 1gp6_A          162 -PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTF  240 (356)
T ss_dssp             -STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEE
T ss_pred             -chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEE
Confidence             458999999999999999999999999999999999998765   3667899999999999999999999999999999


Q ss_pred             EeeCCCCCceeeeCCcEEEeccCCCeEEEEecchhhhhhcCccccceecccCCCCCCeeEEEEeeecCCCCCCCCc-eee
Q 017182          254 VLQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSR-LYG  332 (376)
Q Consensus       254 L~qd~~~GLqV~~~g~W~~V~p~pgalvVnvGD~Le~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~~~~~-~i~  332 (376)
                      |+||+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||++++..+|||++||++|+.|     + +|+
T Consensus       241 L~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d-----~~~i~  315 (356)
T 1gp6_A          241 ILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKD-----KIVLK  315 (356)
T ss_dssp             EEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTT-----TCEEC
T ss_pred             EEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCC-----CcEEe
Confidence            9999999999999999999999999999999999999999999999999999988999999999999985     8 999


Q ss_pred             ccccccCCCCCCCCCCccHHHHHHHHHHcCCCCCC
Q 017182          333 PIEQLLSQISPPIYRETTAKDYVKYIYSKGLDGTS  367 (376)
Q Consensus       333 Pl~~lv~~~~p~~y~~~~~~ey~~~~~~~~~~~k~  367 (376)
                      |+++|+++++|++|+++|++||+..++.+++++|.
T Consensus       316 pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~  350 (356)
T 1gp6_A          316 PLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEEL  350 (356)
T ss_dssp             CCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred             CChhhcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence            99999999999999999999999999888777664
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 376
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-67
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-59
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 5e-52
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 9e-39
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  214 bits (545), Expect = 3e-67
 Identities = 88/348 (25%), Positives = 160/348 (45%), Gaps = 18/348 (5%)

Query: 31  TGVKGLVDSGAAKVPRIFIHEQNKLEHKSDSG----NCQNFTIPIIDFQDIDR-DASARC 85
             V+ L  SG   +P+ +I  + +LE  +D            +P ID ++I+  D   R 
Sbjct: 4   ERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRE 63

Query: 86  EIIDKVRKACEKWGFFQVVNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDET-RSMI 144
             I++++KA   WG   ++N GIP +++E +  A  +F  L  + K+++ +   T +   
Sbjct: 64  NCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQG 123

Query: 145 YNTNFDFYQASAANWRDSLYCVMAP----PPPNPEELPAVCRSVMMDYSKEVMKFGLTVF 200
           Y +      +    W D  + +  P          + P+       +Y+K +      VF
Sbjct: 124 YGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVF 183

Query: 201 ELMSEALGLNSSHLKDLGCAERLYLIGHYYP---ACPEPELTLGLSKHTDSGFLTVVLQD 257
           + +S  LGL    L+         L+         CP+PEL LG+  HTD   LT +L +
Sbjct: 184 KALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 243

Query: 258 QMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACF 317
            + GLQ+ +E  WV  + V  S+++++GD  +++SN K+KS+ HR L      RIS A F
Sbjct: 244 MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 303

Query: 318 FRTHLEEGNDSRLYGPIEQLLSQISPPIYRETTAKDYVKY-IYSKGLD 364
                    D  +  P+ +++S  SP  +   T   ++++ ++ K  +
Sbjct: 304 CEPP----KDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQE 347
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query376
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 92.83
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.7e-78  Score=589.51  Aligned_cols=325  Identities=28%  Similarity=0.508  Sum_probs=279.1

Q ss_pred             ccchHHHHhCCCCCCCCccccCCCCcCcCCC-----CCCCCCCccceeeCCCCC-CChhHHHHHHHHHHHHHHhcCeEEE
Q 017182           30 KTGVKGLVDSGAAKVPRIFIHEQNKLEHKSD-----SGNCQNFTIPIIDFQDID-RDASARCEIIDKVRKACEKWGFFQV  103 (376)
Q Consensus        30 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~-----~~~~~~~~iPvIDls~l~-~~~~~~~~~~~~l~~A~~~~GFF~v  103 (376)
                      +..||+||++|+.+||++||||+.++|....     .+... .+||||||+.+. +++..|++++++|.+||++||||||
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l   81 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDG-PQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL   81 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCS-CCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCC-CCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEE
Confidence            4579999999999999999999999887531     12334 689999999987 6777889999999999999999999


Q ss_pred             EeCCCCHHHHHHHHHHHHHHhcCCHHHHhhhhccCCCCcc-cccccccccccccCCcccccccccCCC-----CCCCCCC
Q 017182          104 VNRGIPLNILEEIINAVRKFHELDADVKKEFYSRDETRSM-IYNTNFDFYQASAANWRDSLYCVMAPP-----PPNPEEL  177 (376)
Q Consensus       104 ~nhGv~~~l~~~~~~~~~~FF~lP~EeK~~~~~~~~~~~~-gy~~~~~~~~~~~~dw~d~~~~~~~p~-----~~~~~~~  177 (376)
                      +||||+.++++++++++++||+||.|+|++|......... +|+...........+|.+.+.....+.     ..||.. 
T Consensus        82 ~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~-  160 (349)
T d1gp6a_          82 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT-  160 (349)
T ss_dssp             ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS-
T ss_pred             EccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccc-
Confidence            9999999999999999999999999999998654333333 344444434455567776654332221     233433 


Q ss_pred             chhhhhHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhcC---CcceeeeeeecCCCCCccccCCcccCCCCCcEEEE
Q 017182          178 PAVCRSVMMDYSKEVMKFGLTVFELMSEALGLNSSHLKDLGC---AERLYLIGHYYPACPEPELTLGLSKHTDSGFLTVV  254 (376)
Q Consensus       178 P~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~~~---~~~~~~r~~yYP~~~~~~~~~g~~~HtD~~~lTlL  254 (376)
                      ++.|++.+.+|+++|.+|+.+|+++++++||+++++|.+.+.   .....+|++|||+|+.+...+|+++|||+|+||||
T Consensus       161 ~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL  240 (349)
T d1gp6a_         161 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI  240 (349)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEE
Confidence            357999999999999999999999999999999999987642   33467999999999999999999999999999999


Q ss_pred             eeCCCCCceeeeCCcEEEeccCCCeEEEEecchhhhhhcCccccceecccCCCCCCeeEEEEeeecCCCCCCCCceeecc
Q 017182          255 LQDQMGGLQVLHEDDWVDVEPVSGSLILNVGDMTQLISNDKFKSVYHRVLAKNNGPRISVACFFRTHLEEGNDSRLYGPI  334 (376)
Q Consensus       255 ~qd~~~GLqV~~~g~W~~V~p~pgalvVnvGD~Le~lSnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~~~~~~i~Pl  334 (376)
                      +|+.++||||+++|+|++|+|.+|++|||+||+||+||||+|||++|||+.|++++||||+||++|+.|    .++++|+
T Consensus       241 ~q~~~~GLqv~~~g~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d----~~i~~pl  316 (349)
T d1gp6a_         241 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKD----KIVLKPL  316 (349)
T ss_dssp             EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTT----TCEECCC
T ss_pred             eccCCcceeeecCCceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCc----ceeecCC
Confidence            999999999999999999999999999999999999999999999999999998999999999999986    3456999


Q ss_pred             ccccCCCCCCCCCCccHHHHHHHHHH
Q 017182          335 EQLLSQISPPIYRETTAKDYVKYIYS  360 (376)
Q Consensus       335 ~~lv~~~~p~~y~~~~~~ey~~~~~~  360 (376)
                      ++|+++++|++|+++|++||++.++.
T Consensus       317 ~~~v~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         317 PEMVSVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             GGGCCSSSCCSSCCEEHHHHHHHHHH
T ss_pred             HHHcCCCCCCCCCCccHHHHHHHHHh
Confidence            99999999999999999999999764
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure