Citrus Sinensis ID: 017189
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 375 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LKJ1 | 378 | 3-hydroxyisobutyryl-CoA h | yes | no | 0.994 | 0.986 | 0.723 | 1e-162 | |
| Q1PEY5 | 378 | Probable 3-hydroxyisobuty | no | no | 0.981 | 0.973 | 0.679 | 1e-152 | |
| Q6NMB0 | 378 | Probable 3-hydroxyisobuty | no | no | 0.981 | 0.973 | 0.684 | 1e-148 | |
| Q8RXN4 | 409 | 3-hydroxyisobutyryl-CoA h | no | no | 0.978 | 0.897 | 0.459 | 7e-91 | |
| Q5XF59 | 401 | 3-hydroxyisobutyryl-CoA h | no | no | 0.962 | 0.900 | 0.468 | 2e-89 | |
| Q9SHJ8 | 387 | 3-hydroxyisobutyryl-CoA h | no | no | 0.936 | 0.906 | 0.431 | 3e-83 | |
| Q58EB4 | 382 | 3-hydroxyisobutyryl-CoA h | yes | no | 0.912 | 0.895 | 0.408 | 2e-75 | |
| Q5XIE6 | 385 | 3-hydroxyisobutyryl-CoA h | yes | no | 0.912 | 0.888 | 0.420 | 3e-75 | |
| Q6NVY1 | 386 | 3-hydroxyisobutyryl-CoA h | yes | no | 0.906 | 0.880 | 0.410 | 2e-74 | |
| Q28FR6 | 385 | 3-hydroxyisobutyryl-CoA h | yes | no | 0.936 | 0.911 | 0.401 | 6e-74 |
| >sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1 PE=1 SV=1 | Back alignment and function desciption |
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Score = 573 bits (1476), Expect = e-162, Method: Compositional matrix adjust.
Identities = 275/380 (72%), Positives = 318/380 (83%), Gaps = 7/380 (1%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
MA + + QVL EE S VRILTLNRP+QLNALS MISRLL+LF +E D +VKL+ILK
Sbjct: 1 MAVEMASQSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILK 60
Query: 61 GKGRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
G GRAFCAGGDVAAVVR IN+G A +FS E++LNY+MATY+K QVSILNGIVMGGG
Sbjct: 61 GHGRAFCAGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGG 120
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM 175
AGVS+HGRFR+ATEN+VFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM
Sbjct: 121 AGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEM 180
Query: 176 RACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235
ACGLATHFVPS+RL LE L ++NS+DP S ++D ++ P LK SAY +DVID+
Sbjct: 181 LACGLATHFVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDR 240
Query: 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCL 295
CFSRRTVEEI+SALE E+T AD WIS IQ+LKK SP SLKISLRSIREGRLQGVGQCL
Sbjct: 241 CFSRRTVEEIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCL 300
Query: 296 IREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDR 355
IREYRMVCHVM GE+SKDF EGCRAIL+DKDKNPKW+P +LE + D+MV+QYF ++ +R
Sbjct: 301 IREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERV--ER 358
Query: 356 WEDIKLPARSNLPATAIAKL 375
+D+KLP R+NLPA IAKL
Sbjct: 359 EDDLKLPPRNNLPALGIAKL 378
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Involved in valine catabolism. May be indirectly involved in benzoic acid biosynthesis and in cold signaling and cold tolerance. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: 4 |
| >sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis thaliana GN=At2g30650 PE=2 SV=1 | Back alignment and function description |
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Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 254/374 (67%), Positives = 304/374 (81%), Gaps = 6/374 (1%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
+ QVL EE S VRILT NRP+QLNALS M+SRLL+LF YE D +VKL++LKG+GRA
Sbjct: 2 ASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRA 61
Query: 66 FCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
F AGGD+ +VR I +G A +F + LNY+++TY KPQVSILNGIVMGGGAG+S
Sbjct: 62 FSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLST 121
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGL 180
+GRFR+ATEN+VFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM ACGL
Sbjct: 122 NGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGL 181
Query: 181 ATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240
ATHFVPS L LE LYKV SS+ IS ++D ++ P+L HS+YH +DVID+CFS+R
Sbjct: 182 ATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKR 241
Query: 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYR 300
TVEEI SALE E T + + W+ IQ+L+KASP+ LKISLRSIREGRLQGVGQCLIREYR
Sbjct: 242 TVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYR 301
Query: 301 MVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDR-WEDI 359
MVCHVM G++SKDF EGCRA+L+DKD+NPKW+P +LE V D+MVDQYF ++ D+ WED+
Sbjct: 302 MVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDL 361
Query: 360 KLPARSNLPATAIA 373
K P R+NLPA AIA
Sbjct: 362 KFPPRNNLPALAIA 375
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Involved in valine catabolism. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 4 |
| >sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis thaliana GN=At2g30660 PE=2 SV=1 | Back alignment and function description |
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Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/374 (68%), Positives = 307/374 (82%), Gaps = 6/374 (1%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
+ + QVL EE S VRILTLNRP+QLNAL MISRLL+LF+ YE D +VKL+ILKG+GRA
Sbjct: 2 ASQSQVLVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRA 61
Query: 66 FCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
FCAGGDV VV+ + +G A FF ++ LNY+MATY+KPQVSILNGIVMG GAGVSI
Sbjct: 62 FCAGGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSI 121
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGL 180
HGRFR+ATEN+VFAMPET+LGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAE+ ACGL
Sbjct: 122 HGRFRIATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGL 181
Query: 181 ATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240
ATHFVPS+RL LE L KV SSDP+ +S ++D ++ P+LK SAYH +DVID+CFS+R
Sbjct: 182 ATHFVPSTRLTALETDLCKVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKR 241
Query: 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYR 300
T+EEI+SALE E+T D W I++LKK+SP+SLKISLRSIREGRLQGVG CL REYR
Sbjct: 242 TMEEIISALERETTQELDDWSLTTIRALKKSSPSSLKISLRSIREGRLQGVGHCLTREYR 301
Query: 301 MVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYF-SKINDDRWEDI 359
MVCHVM G++SKD EGCRAIL+DKD+NPKW+P +LE + D+MVDQ+F ++RWED+
Sbjct: 302 MVCHVMKGDLSKDLVEGCRAILIDKDRNPKWEPRRLEDMKDSMVDQFFERVEEEERWEDL 361
Query: 360 KLPARSNLPATAIA 373
KL R+NL A IA
Sbjct: 362 KLSPRNNLHALRIA 375
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Involved in valine catabolism. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 4 |
| >sp|Q8RXN4|HIBC5_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=At4g31810 PE=2 SV=1 | Back alignment and function description |
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Score = 334 bits (856), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 172/374 (45%), Positives = 236/374 (63%), Gaps = 7/374 (1%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
AS EDQVL E + R LN P LNALSA M+ RL L++ +E + + +++KG
Sbjct: 34 ASDADFEDQVLVEGKAKSRAAILNNPSSLNALSAPMVGRLKRLYESWEENPAISFVLMKG 93
Query: 62 KGRAFCAGGDVAAVVRGINEGAKFFSKEFILN-----YLMATYTKPQVSILNGIVMGGGA 116
G+ FC+G DV ++ INEG SK F N YL TY KP ++I++G+ MG G
Sbjct: 94 SGKTFCSGADVLSLYHSINEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGG 153
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMR 176
G+S+ G FRVAT+ +V A PE +G PD GASY+LSRLPG+ GEY+ LTG +L+G EM
Sbjct: 154 GISLPGMFRVATDKTVLAHPEVQIGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMI 213
Query: 177 ACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKC 236
ACGLATH+ ++RL L+EE + K+ + DPAVI + ++ Y S H +++IDK
Sbjct: 214 ACGLATHYCLNARLPLIEERIGKLLTDDPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKY 273
Query: 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLI 296
F TVEEI+ A+E+E+ N + W ++ +K+ASP SLKI+L+SIREGR Q + QCL
Sbjct: 274 FGLDTVEEIIEAMENEAANSCNEWCKKTLKQIKEASPLSLKITLQSIREGRFQTLDQCLT 333
Query: 297 REYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKIN--DD 354
EYR+ + VS DF EG RA L+DKD PKW P +LE V+ +MVD YF+ + DD
Sbjct: 334 HEYRISICGVSKVVSGDFCEGIRARLVDKDFAPKWDPPRLEDVSKDMVDCYFTPASELDD 393
Query: 355 RWEDIKLPARSNLP 368
++KLP P
Sbjct: 394 SDSELKLPTAQREP 407
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q5XF59|HIBC4_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1 | Back alignment and function description |
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Score = 329 bits (843), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/367 (46%), Positives = 244/367 (66%), Gaps = 6/367 (1%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
+++ + QVL E + R LNRP LNAL+ M RL +L++ +E D N+ +++KG
Sbjct: 31 TSEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGS 90
Query: 63 GRAFCAGGDVAAVVRGINEGA-----KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
GRAFCAGGD+ ++ G+ +FFS + YL+ TY KP V+ILNG+ MGGG G
Sbjct: 91 GRAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTG 150
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRA 177
VSI G FRVAT+ ++FA PET +G PD GAS+ LS LPG GEY+GLTG +L GAEM A
Sbjct: 151 VSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLA 210
Query: 178 CGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCF 237
CGLATH++ S + ++EE L K+ + DP+V+ + ++K + + + +D+++KCF
Sbjct: 211 CGLATHYIRSEEVPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCF 270
Query: 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIR 297
S TVEEI+ +LE E++ R D W ++ LK++SP SLK++LRSIREGRLQ + QCLIR
Sbjct: 271 SHDTVEEIIDSLEIEASRRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIR 330
Query: 298 EYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWE 357
EYRM ++G +S +F EG RA L+DKD+ PKW P LE V+++MVD YF +
Sbjct: 331 EYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYFCALTPTE-P 389
Query: 358 DIKLPAR 364
D+ LP +
Sbjct: 390 DLDLPVK 396
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis thaliana GN=At1g06550 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 227/357 (63%), Gaps = 6/357 (1%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
E V+ EE VR+ TLNRPRQLN +S +++ +L E + +E D KL+++KG GRAF
Sbjct: 10 EPVVIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFS 69
Query: 68 AGGDVAAVVRG---INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRF 124
AGGD+ G + + + + L Y + TY K QVS++NGI MGGGA + + +F
Sbjct: 70 AGGDLKVFYHGQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKF 129
Query: 125 RVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHF 184
V TE +VFA PE + G D G SY SRLPG GE++ LTGARL+G E+ A G+ATHF
Sbjct: 130 SVVTEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELVAIGMATHF 189
Query: 185 VPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244
VPS +L LE L ++S D V+ + I++FS + L S + VI++CFS+ +V++
Sbjct: 190 VPSGKLMDLEARLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINECFSKESVKQ 249
Query: 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCH 304
I+ A E+E++ + WI+ I+ LK++SPT LKI L+SIREGR Q + CL +E+R+ +
Sbjct: 250 IIQAFEAEASKDGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQTLSDCLKKEFRLTLN 309
Query: 305 VMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKL 361
++ +S D +EG RA+ +DKD +PKW P+ L+ V+D ++ F DD DI+L
Sbjct: 310 ILRKTISPDMYEGIRALTIDKDNSPKWNPATLDEVDDEKINSVFKLFEDD---DIEL 363
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Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: - |
| >sp|Q58EB4|HIBCH_DANRE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1 | Back alignment and function description |
|---|
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 224/360 (62%), Gaps = 18/360 (5%)
Query: 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCA 68
+VL E+ ++TLNRP+ LNAL+ MI + ++++ DS ++I+KG G +AFCA
Sbjct: 33 EVLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCA 92
Query: 69 GGDVAAVVRGINEG----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRF 124
GGD+ A+ G FF +E+ILN + TY KP V+++NGI MGGG G+S+HG+F
Sbjct: 93 GGDIRAIAEAGKAGNLLSQVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQF 152
Query: 125 RVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHF 184
RVATE ++FAMPET +GLFPD+G YFL RL G G ++ LTG RL G +++ G+ATHF
Sbjct: 153 RVATEKTLFAMPETGIGLFPDVGGGYFLPRLQGKLGLFLALTGFRLKGRDVQRVGVATHF 212
Query: 185 VPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAY---HWMDVIDKCFSRRT 241
V S ++ LE+ L + S + ++ ++D + + +L + + ID+ FS +
Sbjct: 213 VQSEKIESLEKDLVDLKSPSISDVAQLLDSYQEQSHLDAEKPFVLQEQTEAIDRLFSAGS 272
Query: 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRM 301
VEEI+ L+ + + A+ ++L K SPTSLK++ R I EG + + + EYR+
Sbjct: 273 VEEIVENLKKDGS----AFALKQAETLAKMSPTSLKLTFRQIEEGARMSLQEVFMMEYRL 328
Query: 302 VCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKL 361
M G DF+EG RA+L+DKD++PKWKPS L V++ VD+ FS +++ D+KL
Sbjct: 329 SQACMNGH---DFYEGVRAVLIDKDQSPKWKPSTLAGVSEQFVDKCFSSLDE---RDLKL 382
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Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA. Danio rerio (taxid: 7955) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 4 |
| >sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2 | Back alignment and function description |
|---|
Score = 282 bits (721), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 219/357 (61%), Gaps = 15/357 (4%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
S ++ +VL E ++TLNRP+ LNALS MI ++ +++E D + L+I+KG
Sbjct: 29 SKHTETAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGA 88
Query: 63 G-RAFCAGGDVAAVVRGINEGAKF----FSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
G +AFCAGGD+ A+ G F +E+ILN +A+ KP V++++GI MGGG G
Sbjct: 89 GGKAFCAGGDIKALSEAKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVG 148
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRA 177
+S+HG+FRVATE S+FAMPET +GLFPD+G YFL RL G G ++ LTG RL G ++
Sbjct: 149 LSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHR 208
Query: 178 CGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYL-KDHSAY--HWMDVID 234
G+ATHFV S +L +LEE L + S ++ V++ + + + +D S MD I+
Sbjct: 209 AGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKIN 268
Query: 235 KCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQC 294
CFS TVE+IL L + + + + I+ + K SPTSLKI+LR + EG + + +
Sbjct: 269 SCFSANTVEQILENLRQDGS----PFAMEQIKVINKMSPTSLKITLRQLMEGSTKTLQEV 324
Query: 295 LIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKI 351
L EYR+ M G DF EG RA+L+DKD+ PKWKP+ L+ V D ++ YF +
Sbjct: 325 LTMEYRLTQACMEGH---DFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYFKSL 378
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Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 4 |
| >sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2 | Back alignment and function description |
|---|
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 225/363 (61%), Gaps = 23/363 (6%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M+ ++VL E+ ++TLNRP+ LNAL+ MI ++ +++E D L+I+K
Sbjct: 28 MSKHTDAAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIK 87
Query: 61 GKG-RAFCAGGDVAAVVRGINEGAK--------FFSKEFILNYLMATYTKPQVSILNGIV 111
G G +AFCAGGD+ R I+E K FF +E++LN + + KP V++++GI
Sbjct: 88 GAGGKAFCAGGDI----RVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGIT 143
Query: 112 MGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLD 171
MGGG G+S+HG+FRVATE +FAMPETA+GLFPD+G YFL RL G G ++ LTG RL
Sbjct: 144 MGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLK 203
Query: 172 GAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAY---H 228
G ++ G+ATHFV S +LA+LEE L + S I++V++ + E + ++
Sbjct: 204 GRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEE 263
Query: 229 WMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL 288
MD I+ CFS TVEEI+ L+ + ++ A + ++ + K SPTSLKI+LR + EG
Sbjct: 264 HMDKINSCFSANTVEEIIENLQQDGSSFA----LEQLKVINKMSPTSLKITLRQLMEGSS 319
Query: 289 QGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYF 348
+ + + L EYR+ M G DF EG RA+L+DKD++PKWKP+ L+ V + ++ +F
Sbjct: 320 KTLQEVLTMEYRLSQACMRGH---DFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHF 376
Query: 349 SKI 351
+
Sbjct: 377 KSL 379
|
Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 4 |
| >sp|Q28FR6|HIBCH_XENTR 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1 | Back alignment and function description |
|---|
Score = 278 bits (710), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 220/369 (59%), Gaps = 18/369 (4%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M + ++ + L + ++TLNRP+ LNAL+ MI + +E D L+I+K
Sbjct: 27 MTNHTVKDGECLLTKAGCAGVITLNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIK 86
Query: 61 G-KGRAFCAGGDVAAVVRGINEGAK----FFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
G G+AFCAGGD+ AV G + FF +E+ILN + TY KP V++++GI MGGG
Sbjct: 87 GVGGKAFCAGGDIRAVTDAGKAGDRLAQDFFREEYILNNAIGTYKKPYVALIDGITMGGG 146
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM 175
G+S+HG FRVA+EN++FAMPETA+GLFPD+G YFL RLPG G Y+ LTG RL G+++
Sbjct: 147 VGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLPGKLGLYLALTGFRLKGSDV 206
Query: 176 RACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAY---HWMDV 232
+ G+ATHFV S ++ LE+ L + ++ V+D + + Y + +D
Sbjct: 207 QKAGIATHFVESEKIPSLEQDLVAMKCPSKENVADVLDSYHNKSYAAQDKPFVLAEHLDK 266
Query: 233 IDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVG 292
I+ FS +VE I+ L + ++ A +Q+L SPTSLKI+ R ++EG +
Sbjct: 267 INSLFSASSVEAIIENLRCDGSSFA----LKQLQTLSTMSPTSLKITFRQLKEGSSMSLQ 322
Query: 293 QCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKIN 352
+ L EYR+ M G DF+EG RA+L+DK++N KW P LE V D+ +D YF+ +
Sbjct: 323 EVLTMEYRLSQACMKG---YDFYEGVRAVLIDKNQNAKWNPELLEEVTDDYIDSYFTSLG 379
Query: 353 DDRWEDIKL 361
+ D+KL
Sbjct: 380 N---SDLKL 385
|
Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA. Xenopus tropicalis (taxid: 8364) EC: 3 EC: . EC: 1 EC: . EC: 2 EC: . EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 375 | ||||||
| 225442918 | 383 | PREDICTED: 3-hydroxyisobutyryl-CoA hydro | 1.0 | 0.979 | 0.757 | 1e-173 | |
| 224129400 | 383 | predicted protein [Populus trichocarpa] | 1.0 | 0.979 | 0.754 | 1e-168 | |
| 225454060 | 383 | PREDICTED: 3-hydroxyisobutyryl-CoA hydro | 0.997 | 0.976 | 0.751 | 1e-167 | |
| 255571149 | 384 | 3-hydroxybutyryl-CoA dehydratase, putati | 0.994 | 0.971 | 0.754 | 1e-167 | |
| 449479998 | 384 | PREDICTED: 3-hydroxyisobutyryl-CoA hydro | 0.994 | 0.971 | 0.741 | 1e-162 | |
| 449432315 | 384 | PREDICTED: 3-hydroxyisobutyryl-CoA hydro | 0.994 | 0.971 | 0.741 | 1e-161 | |
| 15239206 | 378 | 3-hydroxyisobutyryl-CoA hydrolase 1 [Ara | 0.994 | 0.986 | 0.723 | 1e-161 | |
| 297794417 | 381 | beta-hydroxyisobutyryl-CoA hydrolase 1 [ | 1.0 | 0.984 | 0.734 | 1e-160 | |
| 351726050 | 387 | peroxisomal 3-hydroxyisobutyryl-coenzyme | 0.992 | 0.961 | 0.689 | 1e-154 | |
| 297826479 | 391 | hypothetical protein ARALYDRAFT_481983 [ | 0.981 | 0.941 | 0.671 | 1e-151 |
| >gi|225442918|ref|XP_002264742.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1 [Vitis vinifera] gi|297743478|emb|CBI36345.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 288/380 (75%), Positives = 335/380 (88%), Gaps = 5/380 (1%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
+ S + DQVL ++ FVR L LNRPRQLNALS+QMIS+LLELF YE DSNVKL+I+K
Sbjct: 4 LGSTRGDTDQVLIDKNLFVRTLVLNRPRQLNALSSQMISKLLELFLAYEEDSNVKLVIMK 63
Query: 61 GKGRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
G GRAFC+GGDVAAVV IN G AKFF +E+ILNY+MATY+KPQVSILNGIVMGGG
Sbjct: 64 GNGRAFCSGGDVAAVVHDINRGNWKIGAKFFWEEYILNYVMATYSKPQVSILNGIVMGGG 123
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM 175
AG S+HGRFR+ATENSVFAMPETALGLFPD+GASYFLSR PGFFGEYVGLTGARLDGAEM
Sbjct: 124 AGASVHGRFRIATENSVFAMPETALGLFPDVGASYFLSRFPGFFGEYVGLTGARLDGAEM 183
Query: 176 RACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235
ACGLATHFVPS+RL+ LE AL+K++SSDPA+ISAVID++SL+PYLKD S YH +D+I++
Sbjct: 184 LACGLATHFVPSARLSSLEAALHKLDSSDPAIISAVIDEYSLQPYLKDKSTYHRLDIINR 243
Query: 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCL 295
CFSRRT+EEILSALE E+ AD WIS IQSL+KASPTSLKISLRSIREGR+QGVGQCL
Sbjct: 244 CFSRRTIEEILSALEREAVKSADDWISSTIQSLQKASPTSLKISLRSIREGRVQGVGQCL 303
Query: 296 IREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDR 355
IREYRMVCHVM GEVSKDF EGCRAIL DKDKNPKW+PS+L+ +ND+M+DQYFS+++D+
Sbjct: 304 IREYRMVCHVMRGEVSKDFVEGCRAILFDKDKNPKWEPSRLDQLNDSMIDQYFSRVDDEE 363
Query: 356 WEDIKLPARSNLPATAIAKL 375
WED+KLPARS+ A+A+AKL
Sbjct: 364 WEDLKLPARSSYTASALAKL 383
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224129400|ref|XP_002320577.1| predicted protein [Populus trichocarpa] gi|118489682|gb|ABK96642.1| unknown [Populus trichocarpa x Populus deltoides] gi|222861350|gb|EEE98892.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/383 (75%), Positives = 328/383 (85%), Gaps = 8/383 (2%)
Query: 1 MASAQSQE---DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLL 57
MAS++ DQVL E+ SF + L LNRP+QLNALS QM+SRLLELF YE D NVKLL
Sbjct: 1 MASSKPHPHLLDQVLVEDNSFSKTLILNRPKQLNALSHQMVSRLLELFLAYEKDPNVKLL 60
Query: 58 ILKGKGRAFCAGGDVAAVVRGINE-----GAKFFSKEFILNYLMATYTKPQVSILNGIVM 112
+LKG GRAFCAGGDVAAVVR I E GA FF KEF LNY+MATYTKPQVSIL+GIVM
Sbjct: 61 LLKGSGRAFCAGGDVAAVVRDIREAHWKSGADFFCKEFTLNYIMATYTKPQVSILDGIVM 120
Query: 113 GGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDG 172
GGGAG S+HGRFRVATENSVFAMPETALGLFPD+GASY+LSRLPGFFGEYVGLTGARLDG
Sbjct: 121 GGGAGASMHGRFRVATENSVFAMPETALGLFPDVGASYYLSRLPGFFGEYVGLTGARLDG 180
Query: 173 AEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDV 232
AEM CGLATH VPS++L LLEEAL ++SSDPA ISA+ID++S PYLK SAYH +DV
Sbjct: 181 AEMLLCGLATHLVPSAKLPLLEEALVNLDSSDPARISAIIDEYSERPYLKGKSAYHRLDV 240
Query: 233 IDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVG 292
IDKCFS RTVE ILSALE E+ N + W S AIQSLKKASPTSLKISL+SIREGRLQGVG
Sbjct: 241 IDKCFSLRTVEAILSALEKEAVNITEDWFSAAIQSLKKASPTSLKISLKSIREGRLQGVG 300
Query: 293 QCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKIN 352
QCL+REYRMVCHVM G++SKDFFEGCRAILLDKDKNPKW+PS+L+L++D +V++YFSK++
Sbjct: 301 QCLVREYRMVCHVMQGKLSKDFFEGCRAILLDKDKNPKWEPSQLDLISDAVVEEYFSKVD 360
Query: 353 DDRWEDIKLPARSNLPATAIAKL 375
D+ WE++KLPAR NLP AIAKL
Sbjct: 361 DEEWEELKLPARFNLPGHAIAKL 383
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454060|ref|XP_002264185.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1 [Vitis vinifera] gi|297744830|emb|CBI38098.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/379 (75%), Positives = 326/379 (86%), Gaps = 5/379 (1%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
S +QVL EE F+R L LNRPRQLNALS QM+S+LLELF YE D NVKL+ILKG
Sbjct: 5 GSTNGDGEQVLVEENLFLRTLILNRPRQLNALSFQMVSKLLELFVAYEDDCNVKLVILKG 64
Query: 62 KGRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGA 116
GRAFCAGGDVAAVVR IN G AKFF KEFILNY+MATY+KPQVSILNGIVMGGGA
Sbjct: 65 NGRAFCAGGDVAAVVRDINGGDWRLGAKFFWKEFILNYVMATYSKPQVSILNGIVMGGGA 124
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMR 176
G S+HGRFR+ATENSVFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM
Sbjct: 125 GASMHGRFRIATENSVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEML 184
Query: 177 ACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKC 236
ACGLATHFVPS+RL LLE AL K++S PA IS+++D++S +P+LK++SAYH + VI+KC
Sbjct: 185 ACGLATHFVPSTRLLLLEAALCKLDSGAPATISSILDEYSQQPHLKENSAYHKLAVINKC 244
Query: 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLI 296
FSRRT+EEILS LE E+ N AD WIS IQSL+KASPTSLKISLRSIREGRLQ VGQCL
Sbjct: 245 FSRRTIEEILSTLEREAVNSADNWISATIQSLQKASPTSLKISLRSIREGRLQDVGQCLT 304
Query: 297 REYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRW 356
REYRMVCHV+ GEVSKDFFEGCRAILLDKDKNPKW+PS+LE +N++MV+QYFSK++D+ W
Sbjct: 305 REYRMVCHVLQGEVSKDFFEGCRAILLDKDKNPKWEPSRLEQINESMVEQYFSKVDDEEW 364
Query: 357 EDIKLPARSNLPATAIAKL 375
ED+KLPA+ A+ +AKL
Sbjct: 365 EDLKLPAKFTFSASLLAKL 383
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255571149|ref|XP_002526525.1| 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis] gi|223534200|gb|EEF35916.1| 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 286/379 (75%), Positives = 325/379 (85%), Gaps = 6/379 (1%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
SA+ Q +QVL EE F R L LNRP+QLNALS +MISRLL+LF YE D NVK L+LKG
Sbjct: 6 SAEGQNEQVLVEENLFARTLILNRPKQLNALSFKMISRLLDLFLAYEEDPNVKFLVLKGN 65
Query: 63 GRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
GRAFCAGGDV+AVVR I EG AKFF KEFILNY+MATYTKPQVSILNGIVMGGGAG
Sbjct: 66 GRAFCAGGDVSAVVRDIREGNWRLGAKFFEKEFILNYVMATYTKPQVSILNGIVMGGGAG 125
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRA 177
S+HGRFRVATENSVFAMPETALGLFPD+GASYFLSRLPGFFGEY+GLTGARLDGAEM
Sbjct: 126 ASMHGRFRVATENSVFAMPETALGLFPDVGASYFLSRLPGFFGEYLGLTGARLDGAEMLT 185
Query: 178 CGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCF 237
CGLATHFVPS++L LLEEAL+K++SSDP +IS++ID + +PYLK+ SAY W+ ID+CF
Sbjct: 186 CGLATHFVPSTKLYLLEEALHKIDSSDPDIISSIIDGYCQQPYLKEQSAYCWLHAIDRCF 245
Query: 238 SRRTVEEILSALESES-TNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLI 296
S+R+VE+I+SALE E+ N+ADAWIS IQ LKKASPTSLKISLRSIREGRLQGVGQCL+
Sbjct: 246 SQRSVEDIISALEREAMKNKADAWISTTIQLLKKASPTSLKISLRSIREGRLQGVGQCLV 305
Query: 297 REYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRW 356
REYRMVCHVM G++S DFFEGCRAILLDKDKNPKW+P KL LV D+ V+QYFSK++D W
Sbjct: 306 REYRMVCHVMRGKLSNDFFEGCRAILLDKDKNPKWEPPKLGLVCDSKVEQYFSKVDDGEW 365
Query: 357 EDIKLPARSNLPATAIAKL 375
ED+KL AR NLP A AKL
Sbjct: 366 EDLKLRARFNLPGCATAKL 384
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449479998|ref|XP_004155771.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust.
Identities = 281/379 (74%), Positives = 325/379 (85%), Gaps = 6/379 (1%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRY-ETDSNVKLLILKG 61
S ++ EDQVL EE FVR+LTLNR +QLNALS M+SRLLELF Y E D +VKL+++KG
Sbjct: 6 STRTDEDQVLVEEKRFVRLLTLNRTKQLNALSFTMVSRLLELFVAYDEADPSVKLVVVKG 65
Query: 62 KGRAFCAGGDVAAVVRGIN-----EGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGA 116
KGRAFCAGGDV+AVV I +GA FF KEF LNYL+AT++KPQVS+L+GIVMGGGA
Sbjct: 66 KGRAFCAGGDVSAVVHDIKRGDWKKGAYFFRKEFTLNYLLATFSKPQVSLLDGIVMGGGA 125
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMR 176
GVSIHGRFRVATE SVFAMPETALGLFPD+GASY+LSRLPGFFGEYVGLTGARLDGAEM
Sbjct: 126 GVSIHGRFRVATEKSVFAMPETALGLFPDVGASYYLSRLPGFFGEYVGLTGARLDGAEML 185
Query: 177 ACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKC 236
ACGLATHFV S +L LEEAL + ++S+P++IS++IDKFS P LK+ S YH +DVIDKC
Sbjct: 186 ACGLATHFVTSEKLTHLEEALCRADTSEPSIISSIIDKFSQRPILKEQSVYHRLDVIDKC 245
Query: 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLI 296
FSRRTVE+IL+ALE E+ + D WI+ IQ LKKASPTSLKISLRSIREGRLQGVGQCLI
Sbjct: 246 FSRRTVEDILAALEDEALKKKDDWITSTIQDLKKASPTSLKISLRSIREGRLQGVGQCLI 305
Query: 297 REYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRW 356
REYRMVCHV+ GEVSKDF EGCRAILLDKD+NPKW+PS LELV D MV++YFS+I D+ W
Sbjct: 306 REYRMVCHVLRGEVSKDFVEGCRAILLDKDRNPKWEPSSLELVTDAMVERYFSRIEDEEW 365
Query: 357 EDIKLPARSNLPATAIAKL 375
ED+KLPARSNLP +AI+KL
Sbjct: 366 EDLKLPARSNLPPSAISKL 384
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449432315|ref|XP_004133945.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/379 (74%), Positives = 324/379 (85%), Gaps = 6/379 (1%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRY-ETDSNVKLLILKG 61
S ++ EDQVL EE FVR+LTLNR +QLNALS M+SRLLELF Y E D +VKL+++KG
Sbjct: 6 STRTDEDQVLVEEKRFVRLLTLNRTKQLNALSFTMVSRLLELFVAYDEADPSVKLVVVKG 65
Query: 62 KGRAFCAGGDVAAVVRGIN-----EGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGA 116
KGRAFCAGGDV+AVV I +GA FF KEF LNYL+AT++KPQVS+L+GIVMGGGA
Sbjct: 66 KGRAFCAGGDVSAVVHDIKRGDWKKGAYFFRKEFTLNYLLATFSKPQVSLLDGIVMGGGA 125
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMR 176
GVSIHGRFRVATE SVFAMPETALGLFPD+GASY+LSRLPGFFGEYVGLTGARLDGAEM
Sbjct: 126 GVSIHGRFRVATEKSVFAMPETALGLFPDVGASYYLSRLPGFFGEYVGLTGARLDGAEML 185
Query: 177 ACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKC 236
ACGLATHFV S +L LEEAL + ++S+P++IS++IDKFS P LK S YH +DVIDKC
Sbjct: 186 ACGLATHFVTSEKLTHLEEALCRADTSEPSIISSIIDKFSQRPILKGQSVYHRLDVIDKC 245
Query: 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLI 296
FSRRTVE+IL+ALE E+ + D WI+ IQ LKKASPTSLKISLRSIREGRLQGVGQCLI
Sbjct: 246 FSRRTVEDILAALEDEALKKKDDWITSTIQDLKKASPTSLKISLRSIREGRLQGVGQCLI 305
Query: 297 REYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRW 356
REYRMVCHV+ GEVSKDF EGCRAILLDKD+NPKW+PS LELV D MV++YFS+I D+ W
Sbjct: 306 REYRMVCHVLRGEVSKDFVEGCRAILLDKDRNPKWEPSSLELVTDAMVERYFSRIEDEEW 365
Query: 357 EDIKLPARSNLPATAIAKL 375
ED+KLPARSNLP +AI+KL
Sbjct: 366 EDLKLPARSNLPPSAISKL 384
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15239206|ref|NP_201395.1| 3-hydroxyisobutyryl-CoA hydrolase 1 [Arabidopsis thaliana] gi|75263928|sp|Q9LKJ1.1|HIBC1_ARATH RecName: Full=3-hydroxyisobutyryl-CoA hydrolase 1; AltName: Full=CoA-thioester hydrolase CHY1 gi|8572760|gb|AAF77193.1|AF276301_1 CoA-thioester hydrolase CHY1 [Arabidopsis thaliana] gi|9759578|dbj|BAB11141.1| 3-hydroxyisobutyryl-coenzyme A hydrolase [Arabidopsis thaliana] gi|24030391|gb|AAN41356.1| putative 3-hydroxyisobutyryl-coenzyme A hydrolase [Arabidopsis thaliana] gi|332010745|gb|AED98128.1| 3-hydroxyisobutyryl-CoA hydrolase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 275/380 (72%), Positives = 318/380 (83%), Gaps = 7/380 (1%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
MA + + QVL EE S VRILTLNRP+QLNALS MISRLL+LF +E D +VKL+ILK
Sbjct: 1 MAVEMASQSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILK 60
Query: 61 GKGRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
G GRAFCAGGDVAAVVR IN+G A +FS E++LNY+MATY+K QVSILNGIVMGGG
Sbjct: 61 GHGRAFCAGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGG 120
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM 175
AGVS+HGRFR+ATEN+VFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM
Sbjct: 121 AGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEM 180
Query: 176 RACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235
ACGLATHFVPS+RL LE L ++NS+DP S ++D ++ P LK SAY +DVID+
Sbjct: 181 LACGLATHFVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDR 240
Query: 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCL 295
CFSRRTVEEI+SALE E+T AD WIS IQ+LKK SP SLKISLRSIREGRLQGVGQCL
Sbjct: 241 CFSRRTVEEIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCL 300
Query: 296 IREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDR 355
IREYRMVCHVM GE+SKDF EGCRAIL+DKDKNPKW+P +LE + D+MV+QYF ++ +R
Sbjct: 301 IREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERV--ER 358
Query: 356 WEDIKLPARSNLPATAIAKL 375
+D+KLP R+NLPA IAKL
Sbjct: 359 EDDLKLPPRNNLPALGIAKL 378
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297794417|ref|XP_002865093.1| beta-hydroxyisobutyryl-CoA hydrolase 1 [Arabidopsis lyrata subsp. lyrata] gi|297310928|gb|EFH41352.1| beta-hydroxyisobutyryl-CoA hydrolase 1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/381 (73%), Positives = 320/381 (83%), Gaps = 6/381 (1%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
MA + + QVL EE S VRILTLNRP+QLNALS QMISRLL+LF +E DS+VKL+ILK
Sbjct: 1 MAVEMASQSQVLVEEKSSVRILTLNRPKQLNALSFQMISRLLQLFLAFEEDSSVKLVILK 60
Query: 61 GKGRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
G GRAFCAGGDVAAVVR I +G A FFS E++LNY+MATY+K QVSILNGIVMGGG
Sbjct: 61 GNGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDEYMLNYVMATYSKAQVSILNGIVMGGG 120
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM 175
AGVS+HGRFR+ATEN+VFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM
Sbjct: 121 AGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEM 180
Query: 176 RACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235
ACGLATHFVPS+RL LE L +V S+DP S +++ ++ P LK SAYH +DVID+
Sbjct: 181 LACGLATHFVPSTRLTALEADLCRVGSNDPTFASTILNAYTQHPRLKPQSAYHRLDVIDR 240
Query: 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCL 295
CFSRRTVEEI+SALE E+T AD WIS IQ+LKKASP SLKISLRSIREGRLQGVGQCL
Sbjct: 241 CFSRRTVEEIISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCL 300
Query: 296 IREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYF-SKINDD 354
IREYRMVCHVM GE+SKDF EGCRAIL+DKDKNPKW+P +LE + D+MV+QYF ++
Sbjct: 301 IREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERVEEEE 360
Query: 355 RWEDIKLPARSNLPATAIAKL 375
WED+KLP R+NLPA AIAKL
Sbjct: 361 EWEDLKLPPRNNLPALAIAKL 381
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351726050|ref|NP_001238393.1| peroxisomal 3-hydroxyisobutyryl-coenzyme A hydrolase [Glycine max] gi|167962768|dbj|BAG09371.1| peroxisomal 3-hydroxyisobutyryl-coenzyme A hydrolase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/383 (68%), Positives = 321/383 (83%), Gaps = 11/383 (2%)
Query: 4 AQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLI----- 58
++ ++QVL + S R+LTLNR +QLNALS M+SRLLE+F E DS++KL++
Sbjct: 5 SKGDDEQVLVQRKSNARVLTLNRTKQLNALSFYMVSRLLEIFSEDEKDSDIKLVVVKSSV 64
Query: 59 LKGKGRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMG 113
+KG GRAFCAGGDVAAV R ++G A FF EF LNYLMATY+KPQVSILNGIVMG
Sbjct: 65 IKGNGRAFCAGGDVAAVARDGSKGDWRFGANFFQSEFKLNYLMATYSKPQVSILNGIVMG 124
Query: 114 GGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGA 173
GGAGVS+HGRFRV TEN+VFAMPETALGLFPDIG+SYFLSRLPGF GEY GLTGARLDGA
Sbjct: 125 GGAGVSVHGRFRVVTENTVFAMPETALGLFPDIGSSYFLSRLPGFLGEYAGLTGARLDGA 184
Query: 174 EMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVI 233
EM ACGLATHFVPSS+L+LLEEAL KV +SDP +SA+I+K+S +P+LK+ S YH MDVI
Sbjct: 185 EMLACGLATHFVPSSKLSLLEEALCKVETSDPNAVSAIINKYSEQPFLKEDSVYHRMDVI 244
Query: 234 DKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQ 293
+KCFS++ VEEILS+LE E+T +AD WIS IQSLKKASPTSLKI LRSIR+GRLQGVGQ
Sbjct: 245 NKCFSKKAVEEILSSLEVEATRKADPWISATIQSLKKASPTSLKIFLRSIRQGRLQGVGQ 304
Query: 294 CLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKIND 353
CL+ +YR+VCH++ G SKDFFEGCRAIL+DKD+NPKW+PSKLEL++D+ V++YFSK++D
Sbjct: 305 CLVSDYRVVCHILKGHYSKDFFEGCRAILIDKDRNPKWEPSKLELLSDSDVNRYFSKLDD 364
Query: 354 DRWEDIKLPAR-SNLPATAIAKL 375
W+D++LP R +NLP AI+KL
Sbjct: 365 KGWKDLELPKRFNNLPTYAISKL 387
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297826479|ref|XP_002881122.1| hypothetical protein ARALYDRAFT_481983 [Arabidopsis lyrata subsp. lyrata] gi|297326961|gb|EFH57381.1| hypothetical protein ARALYDRAFT_481983 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/387 (67%), Positives = 310/387 (80%), Gaps = 19/387 (4%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
+ + QVL EE S V ILTLNRP+QLNAL MISRLL+LF YE D +VKL+ILKG+GRA
Sbjct: 2 ASQSQVLVEEKSSVGILTLNRPKQLNALCFNMISRLLQLFLAYEEDPSVKLVILKGQGRA 61
Query: 66 FCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
FCAGGDV VV + +G A FF ++ LNY+MATY+KPQVSILNGIVMG GAG SI
Sbjct: 62 FCAGGDVPPVVNNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGASI 121
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGL 180
HGRFR+ATEN+VFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM ACGL
Sbjct: 122 HGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGL 181
Query: 181 ATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYH------------ 228
ATHFVPSSRL LE L KV +SDP+ +S ++D ++ P+LK +S YH
Sbjct: 182 ATHFVPSSRLTALEADLCKVGTSDPSFVSTILDAYTQHPHLKQNSLYHRQYIACFININL 241
Query: 229 -WMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGR 287
+DVID+CFS+RT+EEI+SALE ++T D WI I++LKK+SP+SLKISLRSIREGR
Sbjct: 242 QLLDVIDRCFSKRTMEEIISALERDATQELDDWILTTIRALKKSSPSSLKISLRSIREGR 301
Query: 288 LQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQY 347
LQGVG CLIREYRMVCHVM G++SKDF EGCRAIL+DKD+NPKW+P +LE V D+MVDQY
Sbjct: 302 LQGVGHCLIREYRMVCHVMKGDISKDFVEGCRAILIDKDRNPKWEPRRLEDVKDSMVDQY 361
Query: 348 FSKI-NDDRWEDIKLPARSNLPATAIA 373
F ++ ++ WEDIK P R+NLPA++IA
Sbjct: 362 FERVEGEEGWEDIKFPPRNNLPASSIA 388
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 375 | ||||||
| TAIR|locus:2152069 | 378 | CHY1 "beta-hydroxyisobutyryl-C | 0.994 | 0.986 | 0.723 | 3.6e-144 | |
| TAIR|locus:2054437 | 378 | AT2G30660 [Arabidopsis thalian | 0.981 | 0.973 | 0.684 | 5.2e-136 | |
| TAIR|locus:2054517 | 378 | AT2G30650 [Arabidopsis thalian | 0.981 | 0.973 | 0.679 | 2.9e-135 | |
| TAIR|locus:2116797 | 409 | AT4G31810 [Arabidopsis thalian | 0.976 | 0.894 | 0.464 | 1e-82 | |
| TAIR|locus:2009180 | 387 | AT1G06550 [Arabidopsis thalian | 0.944 | 0.914 | 0.427 | 1.3e-75 | |
| WB|WBGene00017301 | 386 | F09F7.4 [Caenorhabditis elegan | 0.914 | 0.888 | 0.449 | 6.7e-72 | |
| RGD|1308392 | 385 | Hibch "3-hydroxyisobutyryl-CoA | 0.912 | 0.888 | 0.422 | 1.8e-69 | |
| UNIPROTKB|Q6NVY1 | 386 | HIBCH "3-hydroxyisobutyryl-CoA | 0.917 | 0.891 | 0.412 | 8e-69 | |
| ZFIN|ZDB-GENE-050327-29 | 384 | hibch "3-hydroxyisobutyryl-Coe | 0.912 | 0.890 | 0.405 | 2.1e-68 | |
| MGI|MGI:1923792 | 385 | Hibch "3-hydroxyisobutyryl-Coe | 0.912 | 0.888 | 0.420 | 3.5e-68 |
| TAIR|locus:2152069 CHY1 "beta-hydroxyisobutyryl-CoA hydrolase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1409 (501.1 bits), Expect = 3.6e-144, P = 3.6e-144
Identities = 275/380 (72%), Positives = 318/380 (83%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
MA + + QVL EE S VRILTLNRP+QLNALS MISRLL+LF +E D +VKL+ILK
Sbjct: 1 MAVEMASQSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILK 60
Query: 61 GKGRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
G GRAFCAGGDVAAVVR IN+G A +FS E++LNY+MATY+K QVSILNGIVMGGG
Sbjct: 61 GHGRAFCAGGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGG 120
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM 175
AGVS+HGRFR+ATEN+VFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM
Sbjct: 121 AGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEM 180
Query: 176 RACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235
ACGLATHFVPS+RL LE L ++NS+DP S ++D ++ P LK SAY +DVID+
Sbjct: 181 LACGLATHFVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDR 240
Query: 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCL 295
CFSRRTVEEI+SALE E+T AD WIS IQ+LKK SP SLKISLRSIREGRLQGVGQCL
Sbjct: 241 CFSRRTVEEIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREGRLQGVGQCL 300
Query: 296 IREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDR 355
IREYRMVCHVM GE+SKDF EGCRAIL+DKDKNPKW+P +LE + D+MV+QYF ++ +R
Sbjct: 301 IREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERV--ER 358
Query: 356 WEDIKLPARSNLPATAIAKL 375
+D+KLP R+NLPA IAKL
Sbjct: 359 EDDLKLPPRNNLPALGIAKL 378
|
|
| TAIR|locus:2054437 AT2G30660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 256/374 (68%), Positives = 309/374 (82%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
+ + QVL EE S VRILTLNRP+QLNAL MISRLL+LF+ YE D +VKL+ILKG+GRA
Sbjct: 2 ASQSQVLVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRA 61
Query: 66 FCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
FCAGGDV VV+ + +G A FF ++ LNY+MATY+KPQVSILNGIVMG GAGVSI
Sbjct: 62 FCAGGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSI 121
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGL 180
HGRFR+ATEN+VFAMPET+LGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAE+ ACGL
Sbjct: 122 HGRFRIATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGL 181
Query: 181 ATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240
ATHFVPS+RL LE L KV SSDP+ +S ++D ++ P+LK SAYH +DVID+CFS+R
Sbjct: 182 ATHFVPSTRLTALETDLCKVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKR 241
Query: 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYR 300
T+EEI+SALE E+T D W I++LKK+SP+SLKISLRSIREGRLQGVG CL REYR
Sbjct: 242 TMEEIISALERETTQELDDWSLTTIRALKKSSPSSLKISLRSIREGRLQGVGHCLTREYR 301
Query: 301 MVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDD-RWEDI 359
MVCHVM G++SKD EGCRAIL+DKD+NPKW+P +LE + D+MVDQ+F ++ ++ RWED+
Sbjct: 302 MVCHVMKGDLSKDLVEGCRAILIDKDRNPKWEPRRLEDMKDSMVDQFFERVEEEERWEDL 361
Query: 360 KLPARSNLPATAIA 373
KL R+NL A IA
Sbjct: 362 KLSPRNNLHALRIA 375
|
|
| TAIR|locus:2054517 AT2G30650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 254/374 (67%), Positives = 304/374 (81%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
+ QVL EE S VRILT NRP+QLNALS M+SRLL+LF YE D +VKL++LKG+GRA
Sbjct: 2 ASHSQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRA 61
Query: 66 FCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
F AGGD+ +VR I +G A +F + LNY+++TY KPQVSILNGIVMGGGAG+S
Sbjct: 62 FSAGGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLST 121
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGL 180
+GRFR+ATEN+VFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM ACGL
Sbjct: 122 NGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGL 181
Query: 181 ATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240
ATHFVPS L LE LYKV SS+ IS ++D ++ P+L HS+YH +DVID+CFS+R
Sbjct: 182 ATHFVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKR 241
Query: 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYR 300
TVEEI SALE E T + + W+ IQ+L+KASP+ LKISLRSIREGRLQGVGQCLIREYR
Sbjct: 242 TVEEIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREGRLQGVGQCLIREYR 301
Query: 301 MVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDR-WEDI 359
MVCHVM G++SKDF EGCRA+L+DKD+NPKW+P +LE V D+MVDQYF ++ D+ WED+
Sbjct: 302 MVCHVMKGDISKDFVEGCRAVLIDKDRNPKWQPRRLEDVTDSMVDQYFERVEDEEGWEDL 361
Query: 360 KLPARSNLPATAIA 373
K P R+NLPA AIA
Sbjct: 362 KFPPRNNLPALAIA 375
|
|
| TAIR|locus:2116797 AT4G31810 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 174/375 (46%), Positives = 238/375 (63%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
AS EDQVL E + R LN P LNALSA M+ RL L++ +E + + +++KG
Sbjct: 34 ASDADFEDQVLVEGKAKSRAAILNNPSSLNALSAPMVGRLKRLYESWEENPAISFVLMKG 93
Query: 62 KGRAFCAGGDVAAVVRGINEGAKFFSKEFILN-----YLMATYTKPQVSILNGIVMGGGA 116
G+ FC+G DV ++ INEG SK F N YL TY KP ++I++G+ MG G
Sbjct: 94 SGKTFCSGADVLSLYHSINEGNTEESKLFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGG 153
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMR 176
G+S+ G FRVAT+ +V A PE +G PD GASY+LSRLPG+ GEY+ LTG +L+G EM
Sbjct: 154 GISLPGMFRVATDKTVLAHPEVQIGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMI 213
Query: 177 ACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKC 236
ACGLATH+ ++RL L+EE + K+ + DPAVI + ++ Y S H +++IDK
Sbjct: 214 ACGLATHYCLNARLPLIEERIGKLLTDDPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKY 273
Query: 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLI 296
F TVEEI+ A+E+E+ N + W ++ +K+ASP SLKI+L+SIREGR Q + QCL
Sbjct: 274 FGLDTVEEIIEAMENEAANSCNEWCKKTLKQIKEASPLSLKITLQSIREGRFQTLDQCLT 333
Query: 297 REYRM-VCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKIN--D 353
EYR+ +C V VS DF EG RA L+DKD PKW P +LE V+ +MVD YF+ + D
Sbjct: 334 HEYRISICGVSK-VVSGDFCEGIRARLVDKDFAPKWDPPRLEDVSKDMVDCYFTPASELD 392
Query: 354 DRWEDIKLPARSNLP 368
D ++KLP P
Sbjct: 393 DSDSELKLPTAQREP 407
|
|
| TAIR|locus:2009180 AT1G06550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 153/358 (42%), Positives = 226/358 (63%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
E V+ EE VR+ TLNRPRQLN +S +++ +L E + +E D KL+++KG GRAF
Sbjct: 10 EPVVIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFS 69
Query: 68 AGGDVAAVVRGINEGAKFFS---KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRF 124
AGGD+ G + + L Y + TY K QVS++NGI MGGGA + + +F
Sbjct: 70 AGGDLKVFYHGQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKF 129
Query: 125 RVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHF 184
V TE +VFA PE + G D G SY SRLPG GE++ LTGARL+G E+ A G+ATHF
Sbjct: 130 SVVTEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELVAIGMATHF 189
Query: 185 VPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244
VPS +L LE L ++S D V+ + I++FS + L S + VI++CFS+ +V++
Sbjct: 190 VPSGKLMDLEARLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINECFSKESVKQ 249
Query: 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCH 304
I+ A E+E++ + WI+ I+ LK++SPT LKI L+SIREGR Q + CL +E+R+ +
Sbjct: 250 IIQAFEAEASKDGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQTLSDCLKKEFRLTLN 309
Query: 305 VMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLP 362
++ +S D +EG RA+ +DKD +PKW P+ L+ V+D ++ F DD E +++P
Sbjct: 310 ILRKTISPDMYEGIRALTIDKDNSPKWNPATLDEVDDEKINSVFKLFEDDDIE-LQIP 366
|
|
| WB|WBGene00017301 F09F7.4 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 164/365 (44%), Positives = 224/365 (61%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAF 66
+ ++L + +++TLNRP+ LNAL+ +M+ Q + + S+V L+ILKG G +AF
Sbjct: 33 KSEILVDTHGSKKVVTLNRPKALNALNLEMVREFYPKLQAWNSSSDVDLVILKGSGDKAF 92
Query: 67 CAGGDVAAVVRGI--NEGAK-------FFSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
CAGGDV AVVR +E K FF +E+ILN+L+ T K V +++GIVMGGG G
Sbjct: 93 CAGGDVLAVVRSFKDSESGKECTMHKDFFREEYILNHLIGTLNKQYVCLIDGIVMGGGCG 152
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRA 177
+S++GRFRVATE ++ AMPETALGLFPD+G SYFLSRL G G Y+ LTG RL GA+
Sbjct: 153 LSVNGRFRVATEKTMLAMPETALGLFPDVGGSYFLSRLKGNLGMYLALTGYRLLGADAFH 212
Query: 178 CGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPY-LKDHSAYHWMDVIDKC 236
GLATHFV SS LA LE+ L + + VI F EP + + S + I
Sbjct: 213 AGLATHFVESSELAKLEKELVNIKDVTENSVDEVIRSF--EPKKIPEFSLSKNLAQIRDS 270
Query: 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLI 296
F ++VEEIL++LE + ++ W +L K SPTSLK++ R I EG +
Sbjct: 271 FKAKSVEEILASLEKDGSD----WAKKQAATLGKMSPTSLKVTHRQITEGSKMSYAKIFT 326
Query: 297 REYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRW 356
EYR+ + KDF EGCRAIL+DKD+ PKW P+ L V D++VD YFS + ++
Sbjct: 327 MEYRLTQRFL---ADKDFHEGCRAILVDKDRKPKWNPATLADVKDSVVDNYFSPLPNN-- 381
Query: 357 EDIKL 361
D+KL
Sbjct: 382 SDLKL 386
|
|
| RGD|1308392 Hibch "3-hydroxyisobutyryl-CoA hydrolase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 151/357 (42%), Positives = 219/357 (61%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
S ++ +VL E ++TLNRP+ LNALS MI ++ +++E D + L+I+KG
Sbjct: 29 SKHTETAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGA 88
Query: 63 G-RAFCAGGDVAAVVRGINEGAKF----FSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
G +AFCAGGD+ A+ G F +E+ILN +A+ KP V++++GI MGGG G
Sbjct: 89 GGKAFCAGGDIKALSEAKKAGQTLSQDLFREEYILNNAIASCQKPYVALIDGITMGGGVG 148
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRA 177
+S+HG+FRVATE S+FAMPET +GLFPD+G YFL RL G G ++ LTG RL G ++
Sbjct: 149 LSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHR 208
Query: 178 CGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYL-KDHSAY--HWMDVID 234
G+ATHFV S +L +LEE L + S ++ V++ + + + +D S MD I+
Sbjct: 209 AGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKIN 268
Query: 235 KCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQC 294
CFS TVE+IL L + + A + I+ + K SPTSLKI+LR + EG + + +
Sbjct: 269 SCFSANTVEQILENLRQDGSPFA----MEQIKVINKMSPTSLKITLRQLMEGSTKTLQEV 324
Query: 295 LIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKI 351
L EYR+ M G DF EG RA+L+DKD+ PKWKP+ L+ V D ++ YF +
Sbjct: 325 LTMEYRLTQACMEGH---DFHEGVRAVLIDKDQTPKWKPADLKDVTDEDLNSYFKSL 378
|
|
| UNIPROTKB|Q6NVY1 HIBCH "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
Identities = 148/359 (41%), Positives = 223/359 (62%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M+ ++VL E+ ++TLNRP+ LNAL+ MI ++ +++E D L+I+K
Sbjct: 28 MSKHTDAAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIK 87
Query: 61 GKG-RAFCAGGDVAAVVRGINEGAK----FFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
G G +AFCAGGD+ + K FF +E++LN + + KP V++++GI MGGG
Sbjct: 88 GAGGKAFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGG 147
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM 175
G+S+HG+FRVATE +FAMPETA+GLFPD+G YFL RL G G ++ LTG RL G ++
Sbjct: 148 VGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDV 207
Query: 176 RACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYL-KDHSAY--HWMDV 232
G+ATHFV S +LA+LEE L + S I++V++ + E + +D S MD
Sbjct: 208 YRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDK 267
Query: 233 IDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVG 292
I+ CFS TVEEI+ L+ + ++ A + ++ + K SPTSLKI+LR + EG + +
Sbjct: 268 INSCFSANTVEEIIENLQQDGSSFA----LEQLKVINKMSPTSLKITLRQLMEGSSKTLQ 323
Query: 293 QCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKI 351
+ L EYR+ M G DF EG RA+L+DKD++PKWKP+ L+ V + ++ +F +
Sbjct: 324 EVLTMEYRLSQACMRGH---DFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSL 379
|
|
| ZFIN|ZDB-GENE-050327-29 hibch "3-hydroxyisobutyryl-Coenzyme A hydrolase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 146/360 (40%), Positives = 222/360 (61%)
Query: 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCA 68
+VL E+ ++TLNRP+ LNAL+ MI + ++++ +S ++I+KG G +AFCA
Sbjct: 35 EVLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKNSETDVVIIKGAGEKAFCA 94
Query: 69 GGDVAAVVRGINEGAK----FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRF 124
GGD+ A+ G FF +E+ILN + TY KP V+++NGI MGGG G+S+HG+F
Sbjct: 95 GGDIRAIAEAGKAGDSLSQVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQF 154
Query: 125 RVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHF 184
RVATE ++FAMPET +GLFPD+G YFL RL G G ++ LTG RL G +++ G+ATHF
Sbjct: 155 RVATEKTLFAMPETGIGLFPDVGGGYFLPRLQGKLGLFLALTGFRLKGRDVQRVGVATHF 214
Query: 185 VPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAY---HWMDVIDKCFSRRT 241
V S ++ LE+ L + S + ++ ++D + + +L + + ID+ FS +
Sbjct: 215 VQSEKIESLEKDLVDLKSPSISDVAQLLDSYQEQSHLDAEKPFVLQEQTEAIDRLFSAGS 274
Query: 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRM 301
VEEI+ L+ + + A+ ++L K SPTSLK++ R I EG + + + EYR+
Sbjct: 275 VEEIVENLKKDGS----AFALKQAETLVKMSPTSLKLTFRQIEEGARMSMQEVFMMEYRL 330
Query: 302 VCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKL 361
M G DF+EG RA+L+DKD++PKWKPS L V+ VD+ FS + + D+KL
Sbjct: 331 SQACMNGH---DFYEGVRAVLIDKDQSPKWKPSTLAGVSVQFVDKCFSSLGE---RDLKL 384
|
|
| MGI|MGI:1923792 Hibch "3-hydroxyisobutyryl-Coenzyme A hydrolase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 150/357 (42%), Positives = 219/357 (61%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
S ++ +VL E ++TLNRP+ LNALS MI ++ + +E D + L+I+KG
Sbjct: 29 SMHTEAAEVLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGA 88
Query: 63 G-RAFCAGGDVAAVVRGI----NEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
G +AFCAGGD+ A+ N F +E+ILN +A+ KP V++++GI MGGG G
Sbjct: 89 GGKAFCAGGDIKALSEAKKARQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVG 148
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRA 177
+S+HG+FRVATE S+FAMPET +GLFPD+G YFL RL G G ++ LTG RL G ++
Sbjct: 149 LSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHR 208
Query: 178 CGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYL-KDHSAY--HWMDVID 234
G+ATHFV S +L +LEE L + S ++ V++ + + + +D S MD I+
Sbjct: 209 AGIATHFVDSEKLRVLEEELLALKSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKIN 268
Query: 235 KCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQC 294
CFS TVE+I+ L + + A + ++ + K SPTSLKI+LR + EG + + +
Sbjct: 269 SCFSANTVEQIIENLRQDGSPFA----IEQMKVINKMSPTSLKITLRQLMEGSSKTLQEV 324
Query: 295 LIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKI 351
LI EYR+ M G DF EG RA+L+DKD+ PKWKP+ L+ V D ++ YF +
Sbjct: 325 LIMEYRITQACMEGH---DFHEGVRAVLIDKDQTPKWKPANLKDVTDEDLNSYFKSL 378
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q2HJ73 | HIBCH_BOVIN | 3, ., 1, ., 2, ., 4 | 0.4116 | 0.9253 | 0.8989 | yes | no |
| Q28FR6 | HIBCH_XENTR | 3, ., 1, ., 2, ., 4 | 0.4010 | 0.936 | 0.9116 | yes | no |
| Q5ZJ60 | HIBCH_CHICK | 3, ., 1, ., 2, ., 4 | 0.4011 | 0.9093 | 0.8857 | yes | no |
| Q9LKJ1 | HIBC1_ARATH | 3, ., 1, ., 2, ., 4 | 0.7236 | 0.9946 | 0.9867 | yes | no |
| Q6NVY1 | HIBCH_HUMAN | 3, ., 1, ., 2, ., 4 | 0.4104 | 0.9066 | 0.8808 | yes | no |
| Q8QZS1 | HIBCH_MOUSE | 3, ., 1, ., 2, ., 4 | 0.4117 | 0.912 | 0.8883 | yes | no |
| Q58EB4 | HIBCH_DANRE | 3, ., 1, ., 2, ., 4 | 0.4083 | 0.912 | 0.8952 | yes | no |
| Q5XIE6 | HIBCH_RAT | 3, ., 1, ., 2, ., 4 | 0.4201 | 0.912 | 0.8883 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.2 | 0.983 |
| 3rd Layer | 3.1.2.4 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 375 | |||
| PLN02988 | 381 | PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol | 0.0 | |
| PLN02874 | 379 | PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrol | 1e-137 | |
| PRK05617 | 342 | PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrol | 1e-129 | |
| PLN02851 | 407 | PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrol | 1e-127 | |
| PLN02157 | 401 | PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrol | 1e-119 | |
| cd06558 | 195 | cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme | 5e-54 | |
| COG1024 | 257 | COG1024, CaiD, Enoyl-CoA hydratase/carnithine race | 2e-46 | |
| pfam13766 | 117 | pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal | 4e-41 | |
| PRK06688 | 259 | PRK06688, PRK06688, enoyl-CoA hydratase; Provision | 9e-31 | |
| pfam00378 | 245 | pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami | 3e-29 | |
| PRK05980 | 260 | PRK05980, PRK05980, enoyl-CoA hydratase; Provision | 4e-28 | |
| PRK06190 | 258 | PRK06190, PRK06190, enoyl-CoA hydratase; Provision | 5e-26 | |
| PRK07657 | 260 | PRK07657, PRK07657, enoyl-CoA hydratase; Provision | 3e-24 | |
| PRK07658 | 257 | PRK07658, PRK07658, enoyl-CoA hydratase; Provision | 1e-21 | |
| PRK06127 | 269 | PRK06127, PRK06127, enoyl-CoA hydratase; Provision | 1e-21 | |
| PRK05862 | 257 | PRK05862, PRK05862, enoyl-CoA hydratase; Provision | 4e-20 | |
| PRK05995 | 262 | PRK05995, PRK05995, enoyl-CoA hydratase; Provision | 9e-20 | |
| TIGR02280 | 256 | TIGR02280, PaaB1, phenylacetate degradation probab | 9e-20 | |
| PRK05809 | 260 | PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydrata | 2e-19 | |
| PRK08260 | 296 | PRK08260, PRK08260, enoyl-CoA hydratase; Provision | 2e-19 | |
| PRK06072 | 248 | PRK06072, PRK06072, enoyl-CoA hydratase; Provision | 3e-19 | |
| PRK07468 | 262 | PRK07468, PRK07468, enoyl-CoA hydratase; Provision | 1e-18 | |
| PRK07799 | 263 | PRK07799, PRK07799, enoyl-CoA hydratase; Provision | 1e-18 | |
| PRK08138 | 261 | PRK08138, PRK08138, enoyl-CoA hydratase; Provision | 2e-18 | |
| PRK09245 | 266 | PRK09245, PRK09245, enoyl-CoA hydratase; Provision | 6e-18 | |
| PLN02888 | 265 | PLN02888, PLN02888, enoyl-CoA hydratase | 5e-17 | |
| PRK06494 | 259 | PRK06494, PRK06494, enoyl-CoA hydratase; Provision | 5e-17 | |
| PRK05870 | 249 | PRK05870, PRK05870, enoyl-CoA hydratase; Provision | 5e-17 | |
| PRK06210 | 272 | PRK06210, PRK06210, enoyl-CoA hydratase; Provision | 4e-16 | |
| PRK06495 | 257 | PRK06495, PRK06495, enoyl-CoA hydratase; Provision | 5e-16 | |
| PLN02600 | 251 | PLN02600, PLN02600, enoyl-CoA hydratase | 5e-16 | |
| PRK08140 | 262 | PRK08140, PRK08140, enoyl-CoA hydratase; Provision | 5e-16 | |
| PRK09674 | 255 | PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; | 1e-15 | |
| PRK07659 | 260 | PRK07659, PRK07659, enoyl-CoA hydratase; Provision | 2e-15 | |
| PRK07511 | 260 | PRK07511, PRK07511, enoyl-CoA hydratase; Provision | 2e-15 | |
| PRK03580 | 261 | PRK03580, PRK03580, carnitinyl-CoA dehydratase; Pr | 3e-15 | |
| PLN02664 | 275 | PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-d | 4e-15 | |
| PRK07827 | 260 | PRK07827, PRK07827, enoyl-CoA hydratase; Provision | 5e-15 | |
| PRK08139 | 266 | PRK08139, PRK08139, enoyl-CoA hydratase; Validated | 5e-15 | |
| PRK06142 | 272 | PRK06142, PRK06142, enoyl-CoA hydratase; Provision | 3e-14 | |
| PRK09120 | 275 | PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydrata | 5e-14 | |
| PRK08150 | 255 | PRK08150, PRK08150, enoyl-CoA hydratase; Provision | 6e-14 | |
| TIGR01929 | 259 | TIGR01929, menB, naphthoate synthase (dihydroxynap | 8e-14 | |
| PRK08258 | 277 | PRK08258, PRK08258, enoyl-CoA hydratase; Provision | 9e-14 | |
| PRK07260 | 255 | PRK07260, PRK07260, enoyl-CoA hydratase; Provision | 1e-13 | |
| PRK05981 | 266 | PRK05981, PRK05981, enoyl-CoA hydratase; Provision | 2e-13 | |
| PRK05674 | 265 | PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydr | 2e-13 | |
| PRK06144 | 262 | PRK06144, PRK06144, enoyl-CoA hydratase; Provision | 7e-13 | |
| PRK08252 | 254 | PRK08252, PRK08252, enoyl-CoA hydratase; Provision | 7e-13 | |
| PRK07509 | 262 | PRK07509, PRK07509, enoyl-CoA hydratase; Provision | 1e-12 | |
| PRK05864 | 276 | PRK05864, PRK05864, enoyl-CoA hydratase; Provision | 3e-12 | |
| PRK07938 | 249 | PRK07938, PRK07938, enoyl-CoA hydratase; Provision | 6e-12 | |
| PRK06023 | 251 | PRK06023, PRK06023, enoyl-CoA hydratase; Provision | 1e-11 | |
| PRK07110 | 249 | PRK07110, PRK07110, polyketide biosynthesis enoyl- | 3e-11 | |
| PRK07112 | 255 | PRK07112, PRK07112, polyketide biosynthesis enoyl- | 6e-11 | |
| PRK07854 | 243 | PRK07854, PRK07854, enoyl-CoA hydratase; Provision | 2e-10 | |
| PRK06143 | 256 | PRK06143, PRK06143, enoyl-CoA hydratase; Provision | 2e-10 | |
| PRK06563 | 255 | PRK06563, PRK06563, enoyl-CoA hydratase; Provision | 2e-10 | |
| PRK12478 | 298 | PRK12478, PRK12478, enoyl-CoA hydratase; Provision | 8e-10 | |
| TIGR02437 | 714 | TIGR02437, FadB, fatty oxidation complex, alpha su | 1e-09 | |
| TIGR02441 | 737 | TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c | 2e-09 | |
| PRK09076 | 258 | PRK09076, PRK09076, enoyl-CoA hydratase; Provision | 2e-09 | |
| PRK08290 | 288 | PRK08290, PRK08290, enoyl-CoA hydratase; Provision | 3e-09 | |
| PLN02921 | 327 | PLN02921, PLN02921, naphthoate synthase | 3e-09 | |
| PRK07396 | 273 | PRK07396, PRK07396, dihydroxynaphthoic acid synthe | 3e-09 | |
| COG0447 | 282 | COG0447, MenB, Dihydroxynaphthoic acid synthase [C | 9e-09 | |
| PRK07327 | 268 | PRK07327, PRK07327, enoyl-CoA hydratase; Provision | 9e-09 | |
| TIGR03210 | 256 | TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hyd | 2e-08 | |
| PRK08272 | 302 | PRK08272, PRK08272, enoyl-CoA hydratase; Provision | 2e-08 | |
| PRK11154 | 708 | PRK11154, fadJ, multifunctional fatty acid oxidati | 6e-08 | |
| PRK11730 | 715 | PRK11730, fadB, multifunctional fatty acid oxidati | 2e-07 | |
| TIGR03200 | 360 | TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-car | 2e-07 | |
| TIGR02440 | 699 | TIGR02440, FadJ, fatty oxidation complex, alpha su | 3e-07 | |
| TIGR03189 | 251 | TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecar | 8e-07 | |
| PRK08259 | 254 | PRK08259, PRK08259, enoyl-CoA hydratase; Provision | 9e-06 | |
| PRK11423 | 261 | PRK11423, PRK11423, methylmalonyl-CoA decarboxylas | 1e-05 | |
| PLN03214 | 278 | PLN03214, PLN03214, probable enoyl-CoA hydratase/i | 6e-05 | |
| PRK06213 | 229 | PRK06213, PRK06213, enoyl-CoA hydratase; Provision | 1e-04 | |
| PRK08788 | 287 | PRK08788, PRK08788, enoyl-CoA hydratase; Validated | 5e-04 | |
| PRK05869 | 222 | PRK05869, PRK05869, enoyl-CoA hydratase; Validated | 7e-04 |
| >gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase | Back alignment and domain information |
|---|
Score = 576 bits (1485), Expect = 0.0
Identities = 277/381 (72%), Positives = 320/381 (83%), Gaps = 6/381 (1%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
MA + + QVL EE S VRILTLNRP+QLNALS MISRLL+LF +E D +VKL+ILK
Sbjct: 1 MAVEMASQSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILK 60
Query: 61 GKGRAFCAGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
G GRAFCAGGDVAAVVR I +G A FFS E++LNY+MATY+K QVSILNGIVMGGG
Sbjct: 61 GHGRAFCAGGDVAAVVRDIEQGNWRLGANFFSDEYMLNYVMATYSKAQVSILNGIVMGGG 120
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM 175
AGVS+HGRFR+ATEN+VFAMPETALGLFPD+GASYFLSRLPGFFGEYVGLTGARLDGAEM
Sbjct: 121 AGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEM 180
Query: 176 RACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235
ACGLATHFVPS+RL LE L ++ S+DP S ++D ++ P LK SAYH +DVID+
Sbjct: 181 LACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDR 240
Query: 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCL 295
CFSRRTVEEI+SALE E+T AD WIS IQ+LKKASP SLKISLRSIREGRLQGVGQCL
Sbjct: 241 CFSRRTVEEIISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCL 300
Query: 296 IREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKI-NDD 354
IREYRMVCHVM GE+SKDF EGCRAIL+DKDKNPKW+P +LE + D+MV+QYF ++ ++
Sbjct: 301 IREYRMVCHVMKGEISKDFVEGCRAILVDKDKNPKWEPRRLEDMKDSMVEQYFERVEEEE 360
Query: 355 RWEDIKLPARSNLPATAIAKL 375
W+D+KLP R+NLPA AIAKL
Sbjct: 361 EWDDLKLPPRNNLPALAIAKL 381
|
Length = 381 |
| >gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Score = 395 bits (1016), Expect = e-137
Identities = 165/359 (45%), Positives = 237/359 (66%), Gaps = 5/359 (1%)
Query: 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAF 66
E+ VL EE VR++TLNRPRQLN +S ++S L E +++E D +V+L+I+KG GRAF
Sbjct: 9 AEEVVLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAF 68
Query: 67 CAGGDVAAVV--RGINEGAK-FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGR 123
AGGD+ R ++ + + L Y + TY K QV++++G+VMGGGAG+ + +
Sbjct: 69 SAGGDLKMFYDGRESDDSCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMK 128
Query: 124 FRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATH 183
FRV TE +VFA PE ++G D G SY LSRLPG GEY+ LTGARL+G EM ACGLATH
Sbjct: 129 FRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLGEYLALTGARLNGKEMVACGLATH 188
Query: 184 FVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243
FVPS +L LE+ L +NS D + + I++FS + + S + I++CFS+ TVE
Sbjct: 189 FVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVE 248
Query: 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVC 303
EI+ A ESE++ + WI + ++ L+++SPT LKI+LRSIREGR Q + +CL +E+R+
Sbjct: 249 EIIKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTM 308
Query: 304 HVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLP 362
+++ VS D +EG RA+++DKD PKW PS L+ V D VD F E+++LP
Sbjct: 309 NILRSTVSDDVYEGIRALVIDKDNAPKWNPSTLDEVTDEKVDLVFQPFKAR--EELQLP 365
|
Length = 379 |
| >gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 374 bits (963), Expect = e-129
Identities = 146/351 (41%), Positives = 207/351 (58%), Gaps = 22/351 (6%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAF 66
ED+VL E V ++TLNRP+ LNALS +MI + +E D V ++++G G R F
Sbjct: 2 EDEVLAEVEGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGF 61
Query: 67 CAGGDV-----AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIH 121
CAGGD+ AA +FF +E+ LN L+A Y KP +++++GIVMGGG G+S H
Sbjct: 62 CAGGDIRALYEAARAGDPLAADRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAH 121
Query: 122 GRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLA 181
G R+ TE + AMPET +G FPD+G +YFLSR PG G Y+ LTGAR+ A+ GLA
Sbjct: 122 GSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAADALYAGLA 181
Query: 182 THFVPSSRLALLEEALYKVNSSDPA-VISAVIDKFSL---EPYLKDHSAYHWMDVIDKCF 237
HFVPS+ L L +AL + A V+ A + F+ L A ID+CF
Sbjct: 182 DHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRA-----WIDECF 236
Query: 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIR 297
+ TVE+I++ALE++ + + +L+ SPTSLK++L +R R + +CL R
Sbjct: 237 AGDTVEDIIAALEAD----GGEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRR 292
Query: 298 EYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYF 348
E R+ ++ S DF EG RA+L+DKD+NPKW P+ LE V V+ +F
Sbjct: 293 ELRLALAML---RSPDFVEGVRAVLIDKDRNPKWSPATLEDVTPEDVEAFF 340
|
Length = 342 |
| >gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Score = 372 bits (956), Expect = e-127
Identities = 172/360 (47%), Positives = 236/360 (65%), Gaps = 6/360 (1%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
+DQVL E + R LNRP LNAL+ M++RL L++ +E + ++ +++KG GRAFC
Sbjct: 41 QDQVLVEGRAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFC 100
Query: 68 AGGDVAAVVRGINEG-----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHG 122
+G DV ++ INEG FF + YL TY KP V+I++GI MG GAG+SI G
Sbjct: 101 SGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPG 160
Query: 123 RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLAT 182
FRV T+ +VFA PE +G PD GASY+LSRLPG+ GEY+ LTG +L+G EM ACGLAT
Sbjct: 161 MFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLAT 220
Query: 183 HFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242
H+ ++RL L+EE L K+ + DPAVI + ++ Y S H ++ IDKCF TV
Sbjct: 221 HYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTV 280
Query: 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMV 302
EEI+ ALE+E+ + D W A++ +K+ASP SLK++L+SIREGR Q + QCL REYR+
Sbjct: 281 EEIIEALENEAASSYDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRIS 340
Query: 303 CHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLP 362
+ VS DF EG RA L+DKD PKW P L V+ +MVD YF+ + D+ +++LP
Sbjct: 341 LCGVSKWVSGDFCEGVRARLVDKDFAPKWDPPSLGEVSKDMVDCYFTPL-DESESELELP 399
|
Length = 407 |
| >gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Score = 350 bits (898), Expect = e-119
Identities = 172/367 (46%), Positives = 242/367 (65%), Gaps = 6/367 (1%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
+ + + QVL E + R LNRP LNAL+ M RL +L++ +E D N+ +++KG
Sbjct: 31 TPEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGS 90
Query: 63 GRAFCAGGDVAAVVRGINEGA-----KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
GRAFCAGGD+ ++ G+ +FFS + YL+ TY KP V+ILNG+ MGGG G
Sbjct: 91 GRAFCAGGDIVSLYHLRKRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTG 150
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRA 177
VSI G FRVAT+ ++FA PET +G PD GAS+ LS LPG GEY+GLTG +L GAEM A
Sbjct: 151 VSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLA 210
Query: 178 CGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCF 237
CGLATH++ S + ++EE L K+ + DP+V+ + ++K + + + +D+++KCF
Sbjct: 211 CGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCF 270
Query: 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIR 297
S TVEEI+ +LE E+ R D W ++ LK++SP SLK++LRSIREGRLQ + QCLIR
Sbjct: 271 SHDTVEEIIDSLEIEAGRRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIR 330
Query: 298 EYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWE 357
EYRM ++G +S +F EG RA L+DKD+ PKW P LE V+++MVD YF +
Sbjct: 331 EYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPSLEKVSEDMVDDYFCALTPTE-P 389
Query: 358 DIKLPAR 364
D+ LP +
Sbjct: 390 DLDLPVK 396
|
Length = 401 |
| >gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 5e-54
Identities = 65/191 (34%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
VL E V +TLNRP + NALS +M+ L E D +V++++L G G+AFCAG
Sbjct: 1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGA 60
Query: 71 DVAAVVRGINEGA---KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVA 127
D+ + + G F + L + KP ++ +NG +GGG +++ R+A
Sbjct: 61 DLKELAALSDAGEEARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIA 120
Query: 128 TENSVFAMPETALGLFPDIGASYFLSRLPGF-FGEYVGLTGARLDGAEMRACGLATHFVP 186
E++ F +PE LGL P G + L RL G + LTG R+ E GL VP
Sbjct: 121 AEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVVP 180
Query: 187 SSRLALLEEAL 197
LL AL
Sbjct: 181 DEE--LLAAAL 189
|
This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. Length = 195 |
| >gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 158 bits (402), Expect = 2e-46
Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAV--V 76
+ ++TLNRP +LNAL+ +M+ L E E D +V++++L G G+AF AG D+ +
Sbjct: 15 IAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSP 74
Query: 77 RGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMP 136
N L +A KP ++ +NG +GGG +++ R+A E++ F +P
Sbjct: 75 EDGNAAENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLP 134
Query: 137 ETALGLFPDIGASYFLSRLPGFFG-EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEE 195
E LGL P G + L RL G + + LTG + AE GL VP + LLE
Sbjct: 135 EVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAEALELGLVDEVVPDAE-ELLER 193
Query: 196 AL 197
AL
Sbjct: 194 AL 195
|
Length = 257 |
| >gnl|CDD|205939 pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal region | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 4e-41
Identities = 52/120 (43%), Positives = 74/120 (61%), Gaps = 7/120 (5%)
Query: 230 MDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQ 289
+ ID+CFS TVEEIL+ALE++ W + +++L+ SP SLK++L +R GR
Sbjct: 5 REAIDRCFSGDTVEEILAALEAD----GSEWAAKTLKTLRSGSPLSLKVTLEQLRRGRGL 60
Query: 290 GVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFS 349
+ +CL EYR+ M DF EG RA+L+DKD+NPKW P+ LE V VD +F+
Sbjct: 61 SLAECLRMEYRLAVRCM---AHGDFAEGVRALLIDKDRNPKWNPATLEEVTAEDVDAFFA 117
|
This is the C-terminal region of enoyl-CoA hydratase. Length = 117 |
| >gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 9e-31
Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V +T+NRP + NAL+A M L + + TD V++++L G GRAF AGGD+ +
Sbjct: 15 VLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKA 74
Query: 79 INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET 138
+ + +A KP V+ +NG +G G +++ A+E++ F++P
Sbjct: 75 PPKPPDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFA 134
Query: 139 ALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGLATHFVPSSRL 190
LGL PD G S L RL +G L G L E GL VP++
Sbjct: 135 KLGLCPDAGGSALLPRL-------IGRARAAEMLLLGEPLSAEEALRIGLVNRVVPAA-- 185
Query: 191 ALLEEA 196
L EA
Sbjct: 186 ELDAEA 191
|
Length = 259 |
| >gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 3e-29
Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE 81
+ L+RP +NALSA++++ L++ ++ E D +VK ++L G AF AG D+ +
Sbjct: 11 IKLDRPEAVNALSAELLTELIQALEKLEQDPSVKAIVLTGGPGAFSAGADIKEMAAEPLA 70
Query: 82 GAKFFSKEFILNYLMATYT--KPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETA 139
FS E + KP ++ +NG +GGG +++ +R+A +N+ F +PE
Sbjct: 71 QQAQFSLEA-QDLWSRLEDLPKPVIAAVNGYALGGGLELALACDYRIAADNAKFGLPEVK 129
Query: 140 LGLFPDIGASYFLSRLPGF-FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEAL- 197
LG+ P G + L R+ G + LTG R+ E GL VP + L+EEA+
Sbjct: 130 LGIIPGAGGTQRLPRIIGVSAALEMLLTGRRIRAQEALKMGLVDKVVPEEQ--LVEEAIE 187
Query: 198 --YKVNSSDPAVISAVIDKFS 216
++ P ++A+
Sbjct: 188 LAQRLADKPPLALAALKAAMR 208
|
This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. Length = 245 |
| >gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 4e-28
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 12/214 (5%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFC 67
D VL E + +LTLNRP +LNAL+ +I RLL E D +V+ +IL G G RAF
Sbjct: 3 DTVLIEIRDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFS 62
Query: 68 AGGDVAAVVRGINEGAKFFSKEFI-----LNYLMATYTKPQVSILNGIVMGGGAGVSIHG 122
AG D+ + GA ++F+ + + + KP ++ +NG+ GGG ++
Sbjct: 63 AGADIHEFSASVAAGADVALRDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAV 122
Query: 123 RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGF-FGEYVGLTGARLDGAEMRACGLA 181
+A+E ++FA PE LG+ P G + L RL G + LTG GL
Sbjct: 123 HLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALELLLTGDAFSAERALEIGLV 182
Query: 182 THFVPSSRLALLEEAL---YKVNSSDPAVISAVI 212
VP LL A ++ P ++A++
Sbjct: 183 NAVVPHE--ELLPAARALARRIIRHSPVAVAAIL 214
|
Length = 260 |
| >gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 5e-26
Identities = 60/188 (31%), Positives = 84/188 (44%), Gaps = 10/188 (5%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
E +L E VR LTLNRP NALSA + L + D +V +++L G AFC
Sbjct: 3 EPILLVETHDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFC 62
Query: 68 AGGDVAAVVR-GINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRV 126
AG D+ + G GA+ + KP + +NG + GG +++ +
Sbjct: 63 AGLDLKELGGDGSAYGAQDALPNPSPAW--PAMRKPVIGAINGAAVTGGLELALACDILI 120
Query: 127 ATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY----VGLTGARLDGAEMRACGLAT 182
A+E + FA +G+ P G S RLP G + LTG LD A+ GL T
Sbjct: 121 ASERARFADTHARVGILPGWGLS---VRLPQKVGIGRARRMSLTGDFLDAADALRAGLVT 177
Query: 183 HFVPSSRL 190
VP L
Sbjct: 178 EVVPHDEL 185
|
Length = 258 |
| >gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 3e-24
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 27/196 (13%)
Query: 16 TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGD--- 71
T V +TLNRPR NALS ++ L + + ++NV+++IL G G +AFCAG D
Sbjct: 11 TPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKE 70
Query: 72 --------VAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGR 123
V V I + + +P ++ +NGI +GGG +++
Sbjct: 71 RAGMNEEQVRHAVSLIRTTMEMVEQ----------LPQPVIAAINGIALGGGLELALACD 120
Query: 124 FRVATENSVFAMPETALGLFPDIGASYFLSRL--PGFFGEYVGLTGARLDGAEMRACGLA 181
FR+A E++ + ET L + P G + L RL G E + TG R+ E + GL
Sbjct: 121 FRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELI-YTGRRISAQEAKEIGLV 179
Query: 182 THFVPSSRLALLEEAL 197
VP+ L E+A+
Sbjct: 180 EFVVPAHL--LEEKAI 193
|
Length = 260 |
| >gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 92.4 bits (230), Expect = 1e-21
Identities = 69/235 (29%), Positives = 107/235 (45%), Gaps = 26/235 (11%)
Query: 18 FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAV-- 75
V ++TLN P NALS+Q++ L EL + E D NV+++++ G+GR F AG D+
Sbjct: 11 HVAVITLNHP-PANALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTS 69
Query: 76 VRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAM 135
V + + + + ++KP ++ ++G +GGG +++ R ATE++ +
Sbjct: 70 VTEAEQATELAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGL 129
Query: 136 PETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGLATHFVPS 187
PE LGL P + RLP YVG LT + GAE GL P
Sbjct: 130 PELNLGLIPGFAGT---QRLP----RYVGKAKALEMMLTSEPITGAEALKWGLVNGVFPE 182
Query: 188 SRLALLEEAL---YKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSR 239
LL++A K+ PA AV++ L K S Y + K F
Sbjct: 183 ET--LLDDAKKLAKKIAGKSPATTRAVLE---LLQTTKSSSYYEGVKREAKIFGE 232
|
Length = 257 |
| >gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 92.8 bits (231), Expect = 1e-21
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 15/255 (5%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M+S S ++L E+T + +T N P + NA+S M L + E D +++++L
Sbjct: 3 MSSISSPTGKLLAEKTGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLT 62
Query: 61 GKG-RAFCAGGDVA--AVVRGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGA 116
G G +AF +G D++ R E + + +A Y KP ++ + G +GGG
Sbjct: 63 GAGEKAFVSGADISQFEESRSDAEAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGM 122
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRL--PGFFGEYVGLTGARLDGAE 174
G+++ R+A E+S F +P LGL L L P + T R D AE
Sbjct: 123 GIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLF-YTARRFDAAE 181
Query: 175 MRACGLATHFVPSSRL-ALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVI 233
GL + L L + + + P + A K ++ LKD M
Sbjct: 182 ALRIGLVHRVTAADDLETALADYAATIAGNAPLTLRAA--KRAIAELLKDEPERD-MAAC 238
Query: 234 DK----CFSRRTVEE 244
CF E
Sbjct: 239 QALVAACFDSEDYRE 253
|
Length = 269 |
| >gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 4e-20
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
+ +L E V ++TLNRP+ LNAL+ ++ L ++ D + +++ G +AF
Sbjct: 3 YETILVETRGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFA 62
Query: 68 AGGDVAAVVRGINEGAKF-----FSKEFILNY-LMATYTKPQVSILNGIVMGGGAGVSIH 121
AG D I E A + ++I N+ +A KP ++ + G +GGG +++
Sbjct: 63 AGAD-------IKEMADLSFMDVYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMM 115
Query: 122 GRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY----VGLTGARLDGAEMRA 177
+A + + F PE LG+ P +G S RL G+ + LTG +D AE
Sbjct: 116 CDIIIAADTAKFGQPEIKLGVLPGMGGS---QRLTRAVGKAKAMDLCLTGRMMDAAEAER 172
Query: 178 CGLATHFVPSSRLALLEEAL 197
GL + VP+ + LL+EAL
Sbjct: 173 AGLVSRVVPADK--LLDEAL 190
|
Length = 257 |
| >gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 9e-20
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE 81
+TLNRP NA + +I+ L F+ + D +V+ ++L G G+AFCAG D +N
Sbjct: 17 VTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGAD-------LNW 69
Query: 82 GAKFFSKEFILNY-----------LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
K N + KP ++ ++G GG G+ VA ++
Sbjct: 70 MKKMAGYSDDENRADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADH 129
Query: 131 SVFAMPETALGLFPDIGASYFLSRLP-GFFGEYVGLTGARLDGAEMRACGLATHFVPSSR 189
+VF + E LGL P + Y + + Y LT R D AE GL VP+
Sbjct: 130 AVFCLSEVRLGLIPATISPYVIRAMGERAARRYF-LTAERFDAAEALRLGLVHEVVPAEA 188
Query: 190 L-ALLEEALYKVNSSDPAVISA 210
L A ++E L + ++ P + A
Sbjct: 189 LDAKVDELLAALVANSPQAVRA 210
|
Length = 262 |
| >gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA hydratase paaB | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 9e-20
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+L + V LTLNRP +LN+ +A+M L E +R E D + + L+L G GR FCAG
Sbjct: 1 ILSALEAGVARLTLNRPDKLNSFTAEMHLELREALERVERD-DARALMLTGAGRGFCAGQ 59
Query: 71 DVAAVVRGINEGA---------KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIH 121
D++ R G F++ L + P V +NG+ G GA +++
Sbjct: 60 DLSE--RNPTPGGAPDLGRTIETFYNP---LVRRLRALPLPVVCAVNGVAAGAGANLALA 114
Query: 122 GRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFF-GEYVGLTGARLDGAEMRACGL 180
+A E++ F +GL PD G ++ L RL G + + G +LD + GL
Sbjct: 115 CDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDARTAASWGL 174
|
This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). Length = 256 |
| >gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated | Back alignment and domain information |
|---|
Score = 86.7 bits (215), Expect = 2e-19
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 23/198 (11%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAG 69
V+ E+ + ++T+NRP+ LNAL+++ + L + E D NV +IL G G +AF AG
Sbjct: 6 VILEKEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAG 65
Query: 70 GDVAAVVRGINE---------GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
D++ + + +NE G K F K + KP ++ +NG +GGG +S+
Sbjct: 66 ADISEM-KDLNEEEGRKFGLLGNKVFRK-------LENLDKPVIAAINGFALGGGCELSM 117
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRL--PGFFGEYVGLTGARLDGAEMRAC 178
R+A+E + F PE LG+ P G + L+R+ PG E + TG ++ E
Sbjct: 118 ACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKELI-YTGDMINAEEALRI 176
Query: 179 GLATHFVPSSRLALLEEA 196
GL V + L+EEA
Sbjct: 177 GLVNKVVEPEK--LMEEA 192
|
Length = 260 |
| >gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 2e-19
Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 35/205 (17%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
+ +TLNRP +LNA + M L+E F + D V+ +I+ G GRAFCAG D++A
Sbjct: 14 IATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSA---- 69
Query: 79 INEGAKFFSKEFILNYLMATYT------------------------KPQVSILNGIVMGG 114
G F KP ++ +NG +G
Sbjct: 70 --GGNTFDLDAPRTPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGV 127
Query: 115 GAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFG--EYVGLTGARLDG 172
GA +++ R+A+ + F G+ P+ +S+FL RL G E+V +G D
Sbjct: 128 GATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSWFLPRLVGLQTALEWV-YSGRVFDA 186
Query: 173 AEMRACGLATHFVPSSRLALLEEAL 197
E GL P LL A
Sbjct: 187 QEALDGGLVRSVHPPD--ELLPAAR 209
|
Length = 296 |
| >gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 86.0 bits (213), Expect = 3e-19
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+ E I+T++RP +LNAL+ +M + + ++ D ++++I+ G+GRAFC G
Sbjct: 2 IKVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGA 61
Query: 71 DVAAVVRGINEG-----------AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVS 119
D++ +F K +I S +NG+ G G++
Sbjct: 62 DLSEFAPDFAIDLRETFYPIIREIRFSDKIYI-------------SAINGVTAGACIGIA 108
Query: 120 IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACG 179
+ F+ A+ + F LGL D G +YFL +L G + + G E G
Sbjct: 109 LSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILVLGGEFTAEEAERWG 168
Query: 180 L 180
L
Sbjct: 169 L 169
|
Length = 248 |
| >gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 1e-18
Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGD------- 71
V LTLNRP + NALSA+MI+ L +R D+ V++++L G G++FCAGGD
Sbjct: 15 VATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQ 74
Query: 72 VAAVVRGINEGAKFFSKEF-ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
+ A E A+ + LN L KP + + G GGG G+ +A
Sbjct: 75 MTADRATRIEEARRLAMMLKALNDL----PKPLIGRIQGQAFGGGVGLISVCDVAIAVSG 130
Query: 131 SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190
+ F + ET LGL P + Y ++R+ V ++ D E GL + VP+ RL
Sbjct: 131 ARFGLTETRLGLIPATISPYVVARMGEANARRVFMSARLFDAEEAVRLGLLSRVVPAERL 190
Query: 191 ALLEEA 196
EA
Sbjct: 191 DAAVEA 196
|
Length = 262 |
| >gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 1e-18
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 21 ILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN 80
I+T+NRP NALS +M+ +++ + R + D +++ IL G G AFCAG D+ A +
Sbjct: 17 IVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKK-P 75
Query: 81 EGAKFFSKEFILNYLMATY-----TKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAM 135
G F + + + A TKP ++ + G + GG + RVA E++ F +
Sbjct: 76 PGDSFKDGSYDPSRIDALLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGI 135
Query: 136 PETALGLFPDIGASYFLSR-LPGFFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLE 194
E LFP G++ L R +P + LTG + AE + GL H VP + L+
Sbjct: 136 SEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIGLIGHVVPDGQ--ALD 193
Query: 195 EALY---KVNSSDPAVISAV 211
+AL +N++ P + A+
Sbjct: 194 KALELAELINANGPLAVQAI 213
|
Length = 263 |
| >gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 2e-18
Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 6 SQEDQVLEEETSF--VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG 63
S V+ E V +L LNRP NAL+ ++ +L E F D +++ ++L G
Sbjct: 3 STATDVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGE 62
Query: 64 RAFCAGGDVAAVVRGINEGAKFFSKEFILNYL------MATYTKPQVSILNGIVMGGGAG 117
+ F AG D I E A + E L + +A KP ++ +NG +GGG
Sbjct: 63 KVFAAGAD-------IKEFATAGAIEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCE 115
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMR 176
+++H VA E++ F PE +GL P G + L R G F + LTG + E
Sbjct: 116 LAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMALTGCMVPAPEAL 175
Query: 177 ACGLATHFVPSSRLALLEEAL 197
A GL + V + L AL
Sbjct: 176 AIGLVSEVVEDEQ--TLPRAL 194
|
Length = 261 |
| >gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 6e-18
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQ-MISRLLELFQRYETDSNVKLLILKGKGRAFC 67
D +L E + LT+NRP NALS + L+ D +V+ +IL G G AF
Sbjct: 3 DFLLVERDGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFS 62
Query: 68 AGGDVAAVV--RGINEGAKFFSKEF----ILNYLMATYT--KPQVSILNGIVMGGGAGVS 119
+GG+V + G G+ ++ I +A Y P ++ +NG +G G ++
Sbjct: 63 SGGNVKDMRARVGAFGGSPADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLA 122
Query: 120 IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY-VGLTGARLDGAEMRAC 178
R+A+E + FA LGL P G ++ L R+ G + TG +D A
Sbjct: 123 CMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMARAAEMAFTGDAIDAATALEW 182
Query: 179 GLATHFVPSSRLALLEEAL 197
GL + VP+ + LL A
Sbjct: 183 GLVSRVVPADQ--LLPAAR 199
|
Length = 266 |
| >gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 5e-17
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M S+ ++ + + + +T+NRP+ LNAL+ M+ L F+R + D +VK++IL
Sbjct: 2 MTQTVSENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILT 61
Query: 61 GKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
G GRAFC+G D+ A K + + M KP + +NG + G +++
Sbjct: 62 GSGRAFCSGVDLTAAEEVFKGDVKDVETDPV--AQMERCRKPIIGAINGFAITAGFEIAL 119
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFF-GEYVGLTGARLDGAEMRACG 179
VA+ + F G+FP G S LSR+ G V LT L G
Sbjct: 120 ACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSLTAMPLTAETAERWG 179
Query: 180 LATHFVPSSRL---AL-LEEALYKVNSSDPAVISAVI-DKFSLE 218
L H V S L A + EA+ K N +VI D L+
Sbjct: 180 LVNHVVEESELLKKAREVAEAIIKNNQGMVLRYKSVINDGLKLD 223
|
Length = 265 |
| >gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 5e-17
Identities = 68/229 (29%), Positives = 98/229 (42%), Gaps = 27/229 (11%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDV---AA 74
V I+TLNRP +NAL L E+F + D + I+ G G +AF AG D+ AA
Sbjct: 14 VTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAA 73
Query: 75 VVRGINEGAKFFSKEFILNYLMATY--TKPQVSILNGIVMGGGAGVSIHGRFRVATENSV 132
+ + F L + + KP ++ +NG+ MGGG +++ VA EN+
Sbjct: 74 GGKRGWPESGFGG-------LTSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENAT 126
Query: 133 FAMPETALGLFPDIGASYFLSRLPGFFGEYVG----LTGARLDGAEMRACGLATHFVPSS 188
FA+PE +GL G L RLP G LTG R+ E G VP+
Sbjct: 127 FALPEPRVGLAALAGG---LHRLPRQIGLKRAMGMILTGRRVTAREGLELGFVNEVVPAG 183
Query: 189 RL-ALLEEALYKVNSSDPAVISA---VIDK---FSLEPYLKDHSAYHWM 230
L A E + + P I A + + SLE + Y +
Sbjct: 184 ELLAAAERWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAV 232
|
Length = 259 |
| >gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 5e-17
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAF 66
D VL + V ++T+N P + NA++A+M ++L E D +V L++ G G+AF
Sbjct: 1 MMDPVLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAF 60
Query: 67 CAGGDV----AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHG 122
CAG D+ AA R +G + F+ +A+ P ++ +NG +G G +++
Sbjct: 61 CAGADLTALGAAPGRPAEDGLRRIYDGFL---AVASCPLPTIAAVNGAAVGAGLNLALAA 117
Query: 123 RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG---LTGARLDGAEMRACG 179
R+A ++F LGL P GA++ L R G + L G R D G
Sbjct: 118 DVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVG--PQVARAALLFGMRFDAEAAVRHG 175
Query: 180 LAT 182
LA
Sbjct: 176 LAL 178
|
Length = 249 |
| >gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 4e-16
Identities = 57/205 (27%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 6 SQEDQVLEEET-SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR 64
D VL E S V ++TLNRP +LNA + M + + R E D V++++L G GR
Sbjct: 2 MAYDAVLYEVADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGR 61
Query: 65 AFCAGGDV-------AAVVRGINEGAKFF---SKEFILNY-LMATYTKPQVSILNGIVMG 113
FCAG D+ + R + F ++ Y + KP ++ +NG G
Sbjct: 62 GFCAGADMGELQTIDPSDGRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAG 121
Query: 114 GGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY-VGLTGARLDG 172
G ++ R A + + F GL + G S+ L RL G + L+
Sbjct: 122 IGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRLVGHANALDLLLSARTFYA 181
Query: 173 AEMRACGLATHFVPSSRLALLEEAL 197
E GL VP L+E L
Sbjct: 182 EEALRLGLVNRVVPPDE--LMERTL 204
|
Length = 272 |
| >gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 5e-16
Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
Q+ E + V ++TL+ P +NALS ++ L+ +F +V++++L G G+ FCA
Sbjct: 4 SQLKLEVSDHVAVVTLDNP-PVNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCA 62
Query: 69 GGDV---AAVVRGINEGAKF----FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIH 121
G D+ V++G G ++E + + KP ++ +NG +G G G+
Sbjct: 63 GADLKGRPDVIKG--PGDLRAHNRRTREC--FHAIRECAKPVIAAVNGPALGAGLGLVAS 118
Query: 122 GRFRVATENSVFAMPETALGLFPDIGASYFLSRL-PGFFGEYVGLTGARLDGAEMRACGL 180
VA+EN+VF +PE +GL G RL + LTG R+ AE+ G+
Sbjct: 119 CDIIVASENAVFGLPEIDVGL---AGGGKHAMRLFGHSLTRRMMLTGYRVPAAELYRRGV 175
Query: 181 ATHFVPSSRLALLEEAL 197
+P L+ EA+
Sbjct: 176 IEACLPPE--ELMPEAM 190
|
Length = 257 |
| >gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 5e-16
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK-GRAFCAGGDVAAVVRGIN 80
L L+RP NA+ +M+ L F++ + D++ ++++L+ FCAG D +
Sbjct: 8 LRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGAD-------LK 60
Query: 81 EGAKFFSKE--FILNYLMATYTK------PQVSILNGIVMGGGAGVSIHGRFRVATENSV 132
E K E +N L +T++ P ++++ G +GGG +++ R+ E +V
Sbjct: 61 ERRKMSPSEVQKFVNSLRSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAV 120
Query: 133 FAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPS 187
F +PET L + P G + L RL G + + TG R+ E + GL + VP+
Sbjct: 121 FGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLVNYCVPA 176
|
Length = 251 |
| >gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 5e-16
Identities = 60/208 (28%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V LTLNRP +LN+ + +M L E + E D + L+L G GR FCAG D+A
Sbjct: 14 VATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVT 72
Query: 79 INEGA--------KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
F++ L + P ++ +NG+ G GA +++ +A +
Sbjct: 73 PGGAMPDLGESIETFYNP---LVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARS 129
Query: 131 SVFAMPETALGLFPDIGASYFLSRLPGF--------FGEYV--------GLTGARLDGAE 174
+ F +GL PD G ++FL RL G GE + GL +D A
Sbjct: 130 ASFIQAFVKIGLVPDSGGTWFLPRLVGMARALGLALLGEKLSAEQAEQWGLIWRVVDDAA 189
Query: 175 MR--ACGLATHFV--PSSRLALLEEALY 198
+ A LA H P+ LAL+++A+
Sbjct: 190 LADEAQQLAAHLATQPTRGLALIKQAMN 217
|
Length = 262 |
| >gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 1e-15
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 19/148 (12%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V +LTLNRP NAL+ ++++L+ + TD+++ + ++ G R F AG D
Sbjct: 12 VLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGAD------- 64
Query: 79 INEGAKFFSKEF--ILN-------YLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATE 129
+NE A+ K+ LN + + KP ++ +NG +G G +++ +A E
Sbjct: 65 LNEMAE---KDLAATLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGE 121
Query: 130 NSVFAMPETALGLFPDIGASYFLSRLPG 157
N+ F +PE LG+ P G + L R G
Sbjct: 122 NARFGLPEITLGIMPGAGGTQRLIRSVG 149
|
Length = 255 |
| >gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 2e-15
Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V + LNRP LNAL M+ LL+ + +S+ +++L+G GR F AGGD+ ++
Sbjct: 16 VATIMLNRPEALNALDEPMLKELLQALKEVA-ESSAHIVVLRGNGRGFSAGGDIKMMLSS 74
Query: 79 INEGAKFFSKEFILNYL----MATYTKPQ--VSILNGIVMGGGAGVSIHGRFRVATENSV 132
+E KF + ++N + + YT P+ +S ++G G G +++ + +A ++
Sbjct: 75 NDES-KF---DGVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAK 130
Query: 133 FAMPETALGLFPDIGASYFLSR 154
AM +GL PD G +FL +
Sbjct: 131 LAMNFIGIGLIPDGGGHFFLQK 152
|
Length = 260 |
| >gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 2e-15
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 7/177 (3%)
Query: 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAG 69
++L +LTL+ P NAL M + +E E D +++ ++L G G FCAG
Sbjct: 4 ELLSRREGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAG 63
Query: 70 GDVAAVVRGINEGAKFFSKEFI--LNYLMA---TYTKPQVSILNGIVMGGGAGVSIHGRF 124
G++ + I L+ + + KP ++ + G G G +++
Sbjct: 64 GNL-NRLLENRAKPPSVQAASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDL 122
Query: 125 RVATENSVFAMPETALGLFPDIGASYFLSR-LPGFFGEYVGLTGARLDGAEMRACGL 180
VA ++ F M +GL PD G S+FL+R LP + L G + + A G+
Sbjct: 123 LVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAERLHALGV 179
|
Length = 260 |
| >gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 3e-15
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 22/202 (10%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN 80
+TL+RP+ NA+ A+ + E+F + D +++ I+ G G + F AG D+ A G
Sbjct: 16 ITLDRPKA-NAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEA 74
Query: 81 EGAKF-------FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVF 133
A F ++ F L+ KP ++ +NG GGG +++ F V +N+ F
Sbjct: 75 PDADFGPGGFAGLTEIFDLD-------KPVIAAVNGYAFGGGFELALAADFIVCADNASF 127
Query: 134 AMPETALGLFPDIGASYFL-SRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPSSRLAL 192
A+PE LG+ PD G L RLP + +TG R+D E G+ VP + L
Sbjct: 128 ALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVPQAE--L 185
Query: 193 LEEA---LYKVNSSDPAVISAV 211
++ A ++ +S P I+A+
Sbjct: 186 MDRARELAQQLVNSAPLAIAAL 207
|
Length = 261 |
| >gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase | Back alignment and domain information |
|---|
Score = 74.2 bits (182), Expect = 4e-15
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE 81
L LNRP Q NALS + + + + NV ++IL G G FC+G D+ + I+E
Sbjct: 21 LNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDL-KTLNSISE 79
Query: 82 ----GAKFFSKEFI---LNYLMATYT------KPQVSILNGIVMGGGAGVSIHGRFRVAT 128
G + S E + + +L T KP ++ ++G +GGG + R +
Sbjct: 80 QSSSGDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCS 139
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFG----EYVGLTGARLDGAEMRACGLAT 182
E++ F++ E L + D+G L RLP G + LTG R G+E + GL +
Sbjct: 140 EDAFFSVKEVDLAITADLGT---LQRLPSIVGYGNAMELALTGRRFSGSEAKELGLVS 194
|
Length = 275 |
| >gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 5e-15
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDV---AAVVRG 78
LTL+ P NALSA+++++L + + D V+ ++L G FCAG D+
Sbjct: 19 LTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGGD 78
Query: 79 INEGAKFFSKEFI-LNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPE 137
+ A ++E L + KP ++ ++G V GG G+ VA S FA+ E
Sbjct: 79 PYDAAVARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTE 138
Query: 138 TALGLFPDIGASYFLSRL-PGFFGEYVGLTGARLDGAEMRACGLAT 182
+G+ P I + L RL P Y LTG + AE GL T
Sbjct: 139 ARIGVAPAIISLTLLPRLSPRAAARYY-LTGEKFGAAEAARIGLVT 183
|
Length = 260 |
| >gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 5e-15
Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 1 MASAQSQEDQVLEEETS-FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLIL 59
MA A + E +L E V LTLNRP+ NALS M++ L D +V++++L
Sbjct: 2 MAPAAATEAPLLLREDRDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVL 61
Query: 60 KGKGRAFCAGGDVAAVVRGINEGAKFFSKEFIL-NYLMATYT---KPQVSILNGIVMGGG 115
G+AFCAG D+ +R G +F F + +M +P ++ ++GI G
Sbjct: 62 AAAGKAFCAGHDLKE-MRA-ARGLAYFRALFARCSRVMQAIVALPQPVIARVHGIATAAG 119
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLF---PDIGASYFLSRLPGFFGEYVGLTGARLDG 172
+ VA + + FA+P +GLF P + S + R E + LTG +D
Sbjct: 120 CQLVASCDLAVAADTARFAVPGVNIGLFCSTPMVALSRNVPRKQAM--EML-LTGEFIDA 176
Query: 173 AEMRACGLATHFVPSSRLA 191
A R GL VP+ L
Sbjct: 177 ATAREWGLVNRVVPADALD 195
|
Length = 266 |
| >gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 3e-14
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 24/193 (12%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVV----- 76
+TLNRP + NA++ S L E+F+ + D V+ ++L G G+ F G D+ A+
Sbjct: 19 VTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQ 78
Query: 77 ---RGINEGAKFFSKEFILNYLMATYT------KPQVSILNGIVMGGGAGVSIHGRFRVA 127
G+ +E IL L A KP ++ + G +GGG + R A
Sbjct: 79 LGKDGLARPRTDLRRE-ILR-LQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYA 136
Query: 128 TENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYV----GLTGARLDGAEMRACGLATH 183
+ ++ F++ E LG+ D+G+ L RLP G+ LTG +D AE GL
Sbjct: 137 SADAKFSVREVDLGMVADVGS---LQRLPRIIGDGHLRELALTGRDIDAAEAEKIGLVNR 193
Query: 184 FVPSSRLALLEEA 196
V ALL A
Sbjct: 194 -VYDDADALLAAA 205
|
Length = 272 |
| >gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase; Validated | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 5e-14
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 23 TLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVA--------- 73
TLNRP + NA+S + ++++ E D + +L+L G G A+ AG D+
Sbjct: 22 TLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQ 81
Query: 74 --AVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENS 131
+ I A + + + Y KP ++++NG GGG + +A + +
Sbjct: 82 PEILQERIRREAYGWWR------RLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEA 135
Query: 132 VFAMPETALGLFPDIGASYFLSRLPGFFGE-YVGLTGARLDGAEMRACGLATHFVPSSRL 190
F + E G+ P G S ++ G Y +TG G + GL VP ++L
Sbjct: 136 QFGLSEINWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGLVNESVPLAQL 195
Query: 191 --ALLEEALYKVNSSDPAVISAVIDKF 215
E A K+ +P V+ A D F
Sbjct: 196 RARTRELAA-KLLEKNPVVLRAAKDGF 221
|
Length = 275 |
| >gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 6e-14
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 20/180 (11%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVA-AVVR 77
V + LNRP + NAL+ +I+ L F R V+ ++L G+G FCAG D++ R
Sbjct: 12 VATIGLNRPAKRNALNDGLIAALRAAFARLPEG--VRAVVLHGEGDHFCAGLDLSELRER 69
Query: 78 GINEGAKF-------FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
EG F K + P ++ L+G V+GGG ++ RVA E+
Sbjct: 70 DAGEGMHHSRRWHRVFDK-------IQYGRVPVIAALHGAVVGGGLELASAAHIRVADES 122
Query: 131 SVFAMPETALGLFPDIGASYFLSRLPGF--FGEYVGLTGARLDGAEMRACGLATHFVPSS 188
+ FA+PE G+F G S + RL G + + LTG D E GLA + VP+
Sbjct: 123 TYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMM-LTGRVYDAQEGERLGLAQYLVPAG 181
|
Length = 255 |
| >gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid synthetase) | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 8e-14
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 10/190 (5%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAF 66
ED E+ T + +T+NRP+ NA + +++ D ++ ++IL G G +AF
Sbjct: 2 EDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAF 61
Query: 67 CAGGDVAAVVRGINEGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVSIH 121
C+GGD VRG + G S LN L + T KP ++++NG +GGG + +
Sbjct: 62 CSGGDQK--VRG-DYGYIDDSGVHRLNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHMM 118
Query: 122 GRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGL 180
+A EN+ F +G F S +++R+ G + + D + GL
Sbjct: 119 CDLTIAAENARFGQTGPKVGSFDGGYGSSYMARIVGQKKAREIWFLCRQYDAKQALDMGL 178
Query: 181 ATHFVPSSRL 190
VP + L
Sbjct: 179 VNTVVPLADL 188
|
This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 259 |
| >gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 9e-14
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 29/195 (14%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V +TLNRP + N L+ + + L +LF+ +VK ++L G G FC+GGDV +
Sbjct: 27 VATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEI--- 83
Query: 79 INEGAKFFSKEFI--------LNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
I K E + L M +P ++ ++G+ G GA +++ R+ T +
Sbjct: 84 IGPLTKMDMPELLAFTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPS 143
Query: 131 SVFAMPETALGLF-PDIGASYFLSRLPGFFGEYVGL--------TGARLDGAEMRACGLA 181
+ A T +GL D+GA L R+ +G TG + E G
Sbjct: 144 AKTAFLFTRVGLAGADMGACALLPRI-------IGQGRASELLYTGRSMSAEEGERWGFF 196
Query: 182 THFVPSSRLALLEEA 196
V LL EA
Sbjct: 197 NRLVEPE--ELLAEA 209
|
Length = 277 |
| >gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 1e-13
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 12/218 (5%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
+ LTLNRP N + M +LE + E D +V+ L++ G+ F GGD+ + R
Sbjct: 12 LATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRA 71
Query: 79 INEG--------AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
++E A+ ++ +++ + KP + ++G V G A +++ F +A+
Sbjct: 72 VDEDDVQSLVKIAELVNE---ISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTK 128
Query: 131 SVFAMPETALGLFPDIGASYFLSRLPGFF-GEYVGLTGARLDGAEMRACGLATHFVPSSR 189
+ F +GL PD G + L+R G ++ +TG L + G S +
Sbjct: 129 TKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEKALEYGFVYRVAESEK 188
Query: 190 LALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAY 227
L E L K + A I E + K Y
Sbjct: 189 LEKTCEQLLKKLRRGSSNSYAAIKSLVWESFFKGWEDY 226
|
Length = 255 |
| >gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 69.8 bits (171), Expect = 2e-13
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 13/207 (6%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSN-VKLLILKGKGRAFCAGGDVAAVVR 77
V ILTL+ P +NA+S M+ L E E V+ L+L G GR FC G ++
Sbjct: 14 VAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGS 73
Query: 78 GINEGAKFFSK----EFILNYLMA---TYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
G E E + + P V+ +NG G G ++ G + +
Sbjct: 74 GGRESDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARS 133
Query: 131 SVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSR 189
+ F +GL PD G+++ L RL G + L G +L GL V +
Sbjct: 134 AYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLPAETALQWGLVNRVVDDA- 192
Query: 190 LALLEEA--LYKVNSSDPAVISAVIDK 214
L+ EA L ++ P V +I K
Sbjct: 193 -ELMAEAMKLAHELANGPTVALGLIRK 218
|
Length = 266 |
| >gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 2e-13
Identities = 44/176 (25%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN- 80
L L+R + NA +AQMI L+ + ++D++++ L+L+G+GR F AG D+A + + +
Sbjct: 19 LWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADL 78
Query: 81 ------EGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFA 134
+ A+ ++ L Y + P ++++ G GG G+ + +++ F
Sbjct: 79 DYNTNLDDARELAE---LMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFC 135
Query: 135 MPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190
+ E +GL P + + + + + LT R DG R GL P++ L
Sbjct: 136 LSEVRIGLAPAVISPFVVKAIGERAARRYALTAERFDGRRARELGLLAESYPAAEL 191
|
Length = 265 |
| >gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 7e-13
Identities = 59/205 (28%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
MA S ++ +LE RI T NRP NA++ M L E+ + D +++ ++L+
Sbjct: 1 MAMTTSTDELLLEVRGGIARI-TFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLR 59
Query: 61 GKG-RAFCAGGDVAAVVRGINEGAKFFSKE-FILNYLMA--TYTKPQVSILNGIVMGGGA 116
G G +AF AG D+A R + + E I L A P ++ + G +GGGA
Sbjct: 60 GAGDKAFVAGTDIAQ-FRAFSTAEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGA 118
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFG----EYVGLTGARLDG 172
++ R+AT ++ F P A L + S L+RL G + + T L+
Sbjct: 119 AIAAACDLRIATPSARFGFP-IARTLGNCLSMSN-LARLVALLGAARVKDMLFTARLLEA 176
Query: 173 AEMRACGLATHFVPSSRLALLEEAL 197
E A GL V + L +AL
Sbjct: 177 EEALAAGLVNEVVEDAALDARADAL 201
|
Length = 262 |
| >gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 7e-13
Identities = 54/194 (27%), Positives = 78/194 (40%), Gaps = 12/194 (6%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
D+VL E V I+T+NRP NA++A + L + D ++ + IL G G FC
Sbjct: 2 SDEVLVERRGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFC 61
Query: 68 AGGDVAAVVRG---INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRF 124
AG D+ A RG G F KP ++ + G + GG +++
Sbjct: 62 AGMDLKAFARGERPSIPGRGF------GGLTERPPRKPLIAAVEGYALAGGFELALACDL 115
Query: 125 RVATENSVFAMPETALGLFPDIGASYFL-SRLPGFFGEYVGLTGARLDGAEMRACGLATH 183
VA ++ F +PE GL G L R+P + LTG L GL
Sbjct: 116 IVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLVNR 175
Query: 184 FVPSSRLALLEEAL 197
L+ AL
Sbjct: 176 LTEPG--QALDAAL 187
|
Length = 254 |
| >gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 1e-12
Identities = 51/200 (25%), Positives = 75/200 (37%), Gaps = 43/200 (21%)
Query: 23 TLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG 82
LNRP ++NAL M L+ +R + D ++ +IL G+G AFCAG DV +V
Sbjct: 17 RLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSPGNA 76
Query: 83 AKFFSKEFILNYLMATYTKP------QVSI------------LNGIVMGGGAGVSIHGRF 124
K L+ +VS+ L G+ GGG +++
Sbjct: 77 VK----------LLFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADI 126
Query: 125 RVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMR 176
R+A ++ ++ E GL PD+ + L L V T E
Sbjct: 127 RIAAPDTKLSIMEAKWGLVPDMAGTVSLRGL-------VRKDVARELTYTARVFSAEEAL 179
Query: 177 ACGLATHFVPSSRLALLEEA 196
GL TH A L A
Sbjct: 180 ELGLVTHVSDDPLAAALALA 199
|
Length = 262 |
| >gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 66.0 bits (161), Expect = 3e-12
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGD---VAAV 75
+ ++TLNRP ++N+++ ++ L E D++V++++L G GR F +G D V
Sbjct: 20 IALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVV 79
Query: 76 --VRGINEGAKFFSKEFILNYLMATYTK---PQVSILNGIVMGGGAGVSIHGRFRVATEN 130
V G+ +L+ ++ + P ++ +NG +GGG +++ RVA+ +
Sbjct: 80 PHVEGLTRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSS 139
Query: 131 SVFAMPETALGLF-PDIGASYFLSRLPGFFGEY-VGLTGARLDGAEMRACGLATHFVPSS 188
+ F GL ++G SY L R G + + LTG +D E GL + VP
Sbjct: 140 AYFRAAGINNGLTASELGLSYLLPRAIGSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDE 199
Query: 189 RL 190
+L
Sbjct: 200 QL 201
|
Length = 276 |
| >gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 6e-12
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDV------ 72
+ +T++ P +NAL + L + D + ++++L+ +GR F AG D+
Sbjct: 12 IAEVTVDYP-PVNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT 70
Query: 73 ---AAVVRGINEG--AKFFSKEFILNYLMATY--TKPQVSILNGIVMGGGAGVSIHGRFR 125
A++ N G A F A Y P ++ ++G +GGG G+ +
Sbjct: 71 PGFTALI-DANRGCFAAF----------RAVYECAVPVIAAVHGFCLGGGIGLVGNADVI 119
Query: 126 VATENSVFAMPETALGLFPDIGASYFLSRL-PGFFGEYVGLTGARLDGAEMRACGLATHF 184
VA++++ F +PE G +GA+ L RL P + T A + AE+ G
Sbjct: 120 VASDDATFGLPEVDRGA---LGAATHLQRLVPQHLMRALFFTAATITAAELHHFGSVEEV 176
Query: 185 VPSSRL--ALLEEALYKVNSSDPAVISA 210
VP +L A LE A K+ + D VI A
Sbjct: 177 VPRDQLDEAALEVA-RKIAAKDTRVIRA 203
|
Length = 249 |
| >gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 1e-11
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V+++ NRP + NA++ M + + + + + D ++ + G F AG D+ +
Sbjct: 16 VQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAA 75
Query: 79 INEGAKFFSKEFILNYLMA--TYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMP 136
G F S+ IL++L+A KP VS ++G+ +G G + +H A+ S+F P
Sbjct: 76 AMGGTSFGSE--ILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTP 133
Query: 137 ETALGLFPDIGASYFLSRLPGFFGEYVGLT-GARLDGAEMRACGL 180
L L P+ G+S RL G + L G + GL
Sbjct: 134 FVDLALVPEAGSSLLAPRLMGHQRAFALLALGEGFSAEAAQEAGL 178
|
Length = 251 |
| >gnl|CDD|235936 PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 3e-11
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 5/178 (2%)
Query: 21 ILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN 80
+T+ NA S ++ +L E F D K++IL G F GG + +
Sbjct: 17 QVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGG-TQEGLLSLQ 75
Query: 81 EGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETAL 140
G F E L L P ++ + G +GGG + ++ V + SV+
Sbjct: 76 TGKGTF-TEANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKY 134
Query: 141 GLFPDIGASYFLSRLPGF-FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEAL 197
G P +GA+ L G G+ + LT GAE++ G+ +P R +LE+AL
Sbjct: 135 GFTPGMGATAILPEKLGLALGQEMLLTARYYRGAELKKRGVPFPVLP--RAEVLEKAL 190
|
Length = 249 |
| >gnl|CDD|235938 PRK07112, PRK07112, polyketide biosynthesis enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 6e-11
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 11/180 (6%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V L L+RP N ++ ++I+ +++ R E +++L+G FC G D +A+
Sbjct: 14 VCFLQLHRPEAQNTINDRLIAECMDVLDRCEHA--ATIVVLEGLPEVFCFGADFSAIAEK 71
Query: 79 INEG-AKFFSKEFILNYLMATYTKPQVSI--LNGIVMGGGAGVSIHGRFRVATENSVFAM 135
+ G A E + + T P V+I + G V GG G +A E + F++
Sbjct: 72 PDAGRADLIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSL 131
Query: 136 PETALGLFPDIGASY--FLSRLPGFF-GEYVGLTGARLDGAEMRACGLATHFVPSSRLAL 192
E GL P A FL R G Y+ L + + + GL + +S L
Sbjct: 132 SELLFGLIP---ACVLPFLIRRIGTQKAHYMTLMTQPVTAQQAFSWGLVDAYGANSDTLL 188
|
Length = 255 |
| >gnl|CDD|236115 PRK07854, PRK07854, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 12/167 (7%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V + L RP + NAL+A++ L E ++ +S + ++L G+G FCAG D++ V
Sbjct: 10 VLTIELQRPERRNALNAELCEELREAVRKAVDES-ARAIVLTGQGTVFCAGADLSGDV-- 66
Query: 79 INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET 138
F + + + P ++ +NG +G G +++ RV + F P
Sbjct: 67 --YADDFPDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVA 124
Query: 139 ALGLFPDIGASYFLSRLPGFFG----EYVGLTGARLDGAEMRACGLA 181
G+ D ++ + RL G + L +L + A G+A
Sbjct: 125 KYGIALD---NWTIRRLSSLVGGGRARAMLLGAEKLTAEQALATGMA 168
|
Length = 243 |
| >gnl|CDD|180423 PRK06143, PRK06143, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 5/196 (2%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVR 77
V LT+ LN L +I L + + D +V++L+L+G G +AF G D+ +
Sbjct: 17 VATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMAT 76
Query: 78 GINEGAK-FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMP 136
A+ F S+ L + + P ++ + G +GGG ++ R+A ++ F MP
Sbjct: 77 LDQASAEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMP 136
Query: 137 ETALGLFPDIGASYFLSRLPGFF-GEYVGLTGARLDGAEMRACGLATHFVPSSRL-ALLE 194
E +G+ P + + L RL G+ ++ LTG +D A+ A GL VP + L A +E
Sbjct: 137 EVRVGI-PSVIHAALLPRLIGWARTRWLLLTGETIDAAQALAWGLVDRVVPLAELDAAVE 195
Query: 195 EALYKVNSSDPAVISA 210
+ P +
Sbjct: 196 RLAASLAGCGPQALRQ 211
|
Length = 256 |
| >gnl|CDD|180625 PRK06563, PRK06563, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 9/192 (4%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
V E V ++ L+RP + NA + M+ L YE D +++ +L G F AG
Sbjct: 1 VSRERRGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGL 60
Query: 71 DVAAVVRGINEGAKFFSKEFILNYLMA--TYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
D+A V + G F + I + +KP V + G + G + + VA
Sbjct: 61 DLADVAPKLAAGGFPFPEGGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAA 120
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFGE---YVGLTGARLDGAEMRACGLATHFV 185
+N+ FA E G+ P GA+ + G +G Y+ LTG D E GL V
Sbjct: 121 DNTRFAQLEVQRGILPFGGATLRFPQAAG-WGNAMRYL-LTGDEFDAQEALRLGLVQEVV 178
Query: 186 PSSRLALLEEAL 197
P LE A+
Sbjct: 179 PPG--EQLERAI 188
|
Length = 255 |
| >gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 8e-10
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 20/189 (10%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V +TLNRP QLN + M + E D ++K+++L+G GRAF G D +
Sbjct: 15 VATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQH 74
Query: 79 INE-----GAKFFSKEFIL---------NYLMATY--TKPQVSILNGIVMGGGAGVSIHG 122
E G K+F + MA + +KP ++ ++G +GG + ++
Sbjct: 75 WGEAMMTDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCA 134
Query: 123 RFRVATENSVFAMPETAL-GLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLA 181
+A++++V P + + G + +L RL ++ LTG L G + L
Sbjct: 135 DIVIASDDAVIGTPYSRMWGAYL---TGMWLYRLSLAKVKWHSLTGRPLTGVQAAEAELI 191
Query: 182 THFVPSSRL 190
VP RL
Sbjct: 192 NEAVPFERL 200
|
Length = 298 |
| >gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 1e-09
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 5 QSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR 64
Q + QV E + + P +N ++ L + + S++K +IL
Sbjct: 4 QGKTIQVTALEDGIAELK-FDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKD 62
Query: 65 AFCAGGDV-----------AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMG 113
AF G D+ A +++ + F+K L P V+ +NGI +G
Sbjct: 63 AFIVGADITEFLGLFALPDAELIQWLLFANSIFNKLEDLPV-------PTVAAINGIALG 115
Query: 114 GGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG 157
GG + FR+A + + +PET LG+ P G + L R+ G
Sbjct: 116 GGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIG 159
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399 [Fatty acid and phospholipid metabolism, Degradation]. Length = 714 |
| >gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 20/152 (13%)
Query: 19 VRILTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLIL-KGKGRAFCAGGDV---- 72
V ++ ++ P ++N LS ++ + E+ T+ +K +L GK +F AG D+
Sbjct: 23 VAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIA 82
Query: 73 -----AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVA 127
V + EG + F + + KP V+ ++G +GGG +++ +R+A
Sbjct: 83 ACKTAQEVTQLSQEGQEMFER-------IEKSQKPIVAAISGSCLGGGLELALACHYRIA 135
Query: 128 TENS--VFAMPETALGLFPDIGASYFLSRLPG 157
T++ + +PE LGL P G + L +L G
Sbjct: 136 TKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTG 167
|
Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human , pig , and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). Length = 737 |
| >gnl|CDD|236373 PRK09076, PRK09076, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 2e-09
Identities = 66/214 (30%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAF-CAGGDV----- 72
V ILTLN P N +A + L +L D +V L++ G G F AG D+
Sbjct: 13 VAILTLNNP-PANTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFAD 71
Query: 73 --AAVVRGINEGAKFFSKEF--ILNYLMATYTKPQVSI--LNGIVMGGGAGVSIHGRFRV 126
AV R E A+ F + F + + + VSI +NG MGGG ++ R+
Sbjct: 72 GDKAVAR---EMARRFGEAFEALSAF------RG-VSIAAINGYAMGGGLECALACDIRI 121
Query: 127 ATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRAC 178
A E + A+PE ++GL P G + L L VG L G R+D A
Sbjct: 122 AEEQAQMALPEASVGLLPCAGGTQNLPWL-------VGEGWAKRMILCGERVDAATALRI 174
Query: 179 GLATHFVPS--SRLALLEEALYKVNSSDPAVISA 210
GL V +R A L A KV + P+ ++A
Sbjct: 175 GLVEEVVEKGEAREAALALAQ-KVANQSPSAVAA 207
|
Length = 258 |
| >gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 3e-09
Identities = 54/214 (25%), Positives = 83/214 (38%), Gaps = 34/214 (15%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
+ + V E + +TLNRP NA + QM+ L F+R E D V++++L G G+
Sbjct: 1 MEYEYVRYEVAGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKH 60
Query: 66 FCAGGDV--AAVVRGINE-----------GAKFFSKEFILNYLMATY----------TKP 102
F AG D+ R + GA E Y KP
Sbjct: 61 FSAGHDLGSGTPGRDRDPGPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKP 120
Query: 103 QVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFG-- 160
++ + G + GG ++ VA++++ F+ P +G+ G YF P G
Sbjct: 121 TIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI---PGVEYFAH--PWELGPR 175
Query: 161 ---EYVGLTGARLDGAEMRACGLATHFVPSSRLA 191
E + TG RL E G+ VP L
Sbjct: 176 KAKELL-FTGDRLTADEAHRLGMVNRVVPRDELE 208
|
Length = 288 |
| >gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 3e-09
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN 80
+T+NRP + NA + + L F DS+V ++IL GKG +AFC+GGD A +
Sbjct: 80 ITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGY 139
Query: 81 EGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAM 135
G + LN L + KP ++++ G +GGG + + +A +N+VF
Sbjct: 140 VGPDDAGR---LNVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQ 196
Query: 136 PETALGLFPDIG-ASYFLSRLPG 157
+G F D G S ++RL G
Sbjct: 197 TGPKVGSF-DAGYGSSIMARLVG 218
|
Length = 327 |
| >gnl|CDD|180958 PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 3e-09
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN 80
+T+NRP NA + + +++ F D N+ ++IL G G +AFC+GGD VRG
Sbjct: 26 ITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQK--VRG-Y 82
Query: 81 EGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAM 135
G LN L + T KP ++++ G +GGG + + +A +N++F
Sbjct: 83 GGYVDDDGVPRLNVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQ 142
Query: 136 PETALGLFPD--IGASYFLSRLPGFFGEYVGLTGAR--------LDGAEMRACGLATHFV 185
+G F D GASY L+R+ VG AR D E GL V
Sbjct: 143 TGPKVGSF-DGGYGASY-LARI-------VGQKKAREIWFLCRQYDAQEALDMGLVNTVV 193
Query: 186 PSSRLALLEE 195
P LA LE+
Sbjct: 194 P---LADLEK 200
|
Length = 273 |
| >gnl|CDD|223524 COG0447, MenB, Dihydroxynaphthoic acid synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 9e-09
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 28/189 (14%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG---RAFCAGGDVAAV 75
+I T+NRP NA + + +++ F D NV +++L G G +AFC+GGD
Sbjct: 30 AKI-TINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQK-- 86
Query: 76 VRGINEGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
VRG + G LN L + T KP ++++ G +GGG + + +A +N
Sbjct: 87 VRGDSGGYVDDDGIPRLNVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADN 146
Query: 131 SVFAMPETALGLF-PDIGASYFLSRLPGFFGEYVGLTGAR--------LDGAEMRACGLA 181
++F +G F G+SY L+R+ VG AR D E GL
Sbjct: 147 AIFGQTGPKVGSFDGGYGSSY-LARI-------VGQKKAREIWFLCRQYDAEEALDMGLV 198
Query: 182 THFVPSSRL 190
VP + L
Sbjct: 199 NTVVPHADL 207
|
Length = 282 |
| >gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 9e-09
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAF 66
VLE + LN P LNA A+M L ++++ + D +V++++++G+G+AF
Sbjct: 18 PPPGVLE--------IVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAF 69
Query: 67 CAGGDVAAVVRGINE---GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGG------AG 117
AGGD+A V ++ A+ + + L Y + KP VS ++G +G G A
Sbjct: 70 SAGGDLALVEEMADDFEVRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLAD 129
Query: 118 VSIHGR 123
+SI +
Sbjct: 130 ISIAAK 135
|
Length = 268 |
| >gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 2e-08
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 17/192 (8%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAF 66
ED + E+ I +NRP ++NA Q L+ + D + +++L G G +AF
Sbjct: 2 EDILYEKRNGIAWI-MINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAF 60
Query: 67 CAGGDVAAVVRGINEGAKFFSKEFI------LNYLMATYTKPQVSILNGIVMGGGAGVSI 120
C GGD + ++G + + I L+ + KP ++ + G +GGG +
Sbjct: 61 CTGGD-----QSTHDG-GYDGRGTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVT 114
Query: 121 HGRFRVATENSVFAMPETALG-LFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRAC 178
+A+E + F +G + P G + L+R+ G + R E A
Sbjct: 115 ICDLTIASEKAQFGQVGPKVGSVDPGYGTAL-LARVVGEKKAREIWYLCRRYTAQEALAM 173
Query: 179 GLATHFVPSSRL 190
GL VP +L
Sbjct: 174 GLVNAVVPHDQL 185
|
Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. Length = 256 |
| >gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAA 74
+TLNRP + NA++A L +R + D V ++++ G G+ FCAG D++A
Sbjct: 23 ITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSA 75
|
Length = 302 |
| >gnl|CDD|236864 PRK11154, fadJ, multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 6e-08
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 19 VRILTLNRP-RQLNALSAQMISRLLELFQRYETDSNVKLLIL-KGKGRAFCAGGDV---- 72
+ ++T++ P ++N L A+ ++ + ++ D +K ++ GK F AG D+
Sbjct: 16 IAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLA 75
Query: 73 ----AAVVRGINE-GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVA 127
A + G + F++ + P V+ ++G +GGG +++ +RV
Sbjct: 76 ACKTAQEAEALARQGQQLFAE-------IEALPIPVVAAIHGACLGGGLELALACHYRVC 128
Query: 128 TENS--VFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLD----GAEMRA---- 177
T++ V +PE LGL P G + L RL +G++ A LD G ++RA
Sbjct: 129 TDDPKTVLGLPEVQLGLLPGSGGTQRLPRL-------IGVSTA-LDMILTGKQLRAKQAL 180
Query: 178 -CGLATHFVPSSRLALLEEAL 197
GL VP S LLE A+
Sbjct: 181 KLGLVDDVVPHS--ILLEVAV 199
|
Length = 708 |
| >gnl|CDD|183293 PRK11730, fadB, multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Score = 52.9 bits (128), Expect = 2e-07
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 20/148 (13%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVK-LLILKGKGRAFCAGGDV-------- 72
L + P +N L ++ L E E S++K LL+ K AF G D+
Sbjct: 20 LVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKD-AFIVGADITEFLSLFA 78
Query: 73 ---AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATE 129
+ + ++ F++ L P V+ +NG +GGG + +RVA+
Sbjct: 79 APEEELSQWLHFANSIFNRLEDLPV-------PTVAAINGYALGGGCECVLATDYRVASP 131
Query: 130 NSVFAMPETALGLFPDIGASYFLSRLPG 157
++ +PET LG+ P G + L RL G
Sbjct: 132 DARIGLPETKLGIMPGFGGTVRLPRLIG 159
|
Length = 715 |
| >gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 2e-07
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 19/143 (13%)
Query: 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN 80
+ L+ P+Q N+ + M+ ++ F+R +D +V ++ G +AFC GG+
Sbjct: 41 IILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTK------- 93
Query: 81 EGAKFFS---KEF-----ILNYLMATY---TKPQVSILNGIVMGGGAGVSIHGRFRVATE 129
E A++++ +E+ + N +++ KP + +NG+ +GGG + + F +A +
Sbjct: 94 EYAEYYAGNPQEYRQYMRLFNDMVSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQD 153
Query: 130 NSVFAMPETALGLFPDIGASYFL 152
+ F G P GA+ FL
Sbjct: 154 LANFGQAGPKHGSAPIGGATDFL 176
|
Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 360 |
| >gnl|CDD|131493 TIGR02440, FadJ, fatty oxidation complex, alpha subunit FadJ | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 3e-07
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 19 VRILTLNRP-RQLNALSAQMISRLLELFQRYETDSNVK-LLILKGKGRAFCAGGDVA--A 74
+ ILT++ P ++N L A+ ++ E+ + + D +++ L+++ GK F AG D++ A
Sbjct: 11 IAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLA 70
Query: 75 VVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI--HGRFRVATENSV 132
+ E + +L + P V+ ++G +GGG +++ H R + +V
Sbjct: 71 ACQTAGEAKALAQQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTV 130
Query: 133 FAMPETALGLFPDIGASYFLSRLPGFFGEY-VGLTGARLDGAEMRACGLATHFVPSSRL 190
+PE LGL P G + L RL G + LTG +L + GL VP S L
Sbjct: 131 LGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILTGKQLRAKQALKLGLVDDVVPQSIL 189
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog model [Fatty acid and phospholipid metabolism, Degradation]. Length = 699 |
| >gnl|CDD|132233 TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecarbonyl-CoA hydratase | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 8e-07
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 7/195 (3%)
Query: 12 LEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGD 71
LE + +R L L RP+ N + A MI+ L + DS ++ ++L +G F G
Sbjct: 5 LERDGKLLR-LRLARPKA-NIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGAS 62
Query: 72 VAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENS 131
VA + ++ A + L M P + + G +GGG V+ G A ++
Sbjct: 63 VAEHMP--DQCAAMLASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDA 120
Query: 132 VFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFV---PSS 188
PE LG+F + R+ E + +G +DGAE GLA ++
Sbjct: 121 KLGQPEIVLGVFAPAASCLLPERMGRVAAEDLLYSGRSIDGAEGARIGLANAVAEDPENA 180
Query: 189 RLALLEEALYKVNSS 203
LA +E K+++S
Sbjct: 181 ALAWFDEHPAKLSAS 195
|
This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation. Length = 251 |
| >gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 9e-06
Identities = 61/216 (28%), Positives = 88/216 (40%), Gaps = 54/216 (25%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
V E V + LNRP NA+ + L + F+ ++ D + +L G G FCA
Sbjct: 3 MSVRVERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCA 62
Query: 69 GGDVAAVVRGINEGAKFFSKEFILNYLMAT-----------YTKPQVSILNGIVMGGGAG 117
G D+ AV G G N L + +KP ++ ++G + GG
Sbjct: 63 GADLKAVGTG--RG----------NRLHPSGDGPMGPSRMRLSKPVIAAVSGYAVAGGLE 110
Query: 118 VSIHGRFRVATENSVFAMPETALGLF------PDI-GASYFLSRLPGFFGEYVG------ 164
+++ RVA E++VF G+F P I G + L RL +G
Sbjct: 111 LALWCDLRVAEEDAVF-------GVFCRRWGVPLIDGGTVRLPRL-------IGHSRAMD 156
Query: 165 --LTGARLDGAEMRACGLATHFVP--SSRLALLEEA 196
LTG +D E A GLA VP +R A E A
Sbjct: 157 LILTGRPVDADEALAIGLANRVVPKGQARAAAEELA 192
|
Length = 254 |
| >gnl|CDD|236908 PRK11423, PRK11423, methylmalonyl-CoA decarboxylase; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 19 VRILTLNRPRQLNALSAQMISRL---LELFQRYETDSNVKLLILK--GKGRAFCAGGDVA 73
+ +T N P + NALS +I L L R E ++++IL+ + + AG D+
Sbjct: 14 IATITFNNPAKRNALSKVLIDDLMQALSDLNRPE----IRVVILRAPSGSKVWSAGHDIH 69
Query: 74 AVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVF 133
+ G + + + ++ + KP ++++ G V GG + + +A S F
Sbjct: 70 ELPSGGRDPLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTF 129
Query: 134 AMPETALGL-FPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190
AM LG+ + G F + + + T + + A G+ H V L
Sbjct: 130 AMTPANLGVPYNLSGILNFTNDAGFHIVKEMFFTASPITAQRALAVGILNHVVEVEEL 187
|
Length = 261 |
| >gnl|CDD|215635 PLN03214, PLN03214, probable enoyl-CoA hydratase/isomerase; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 6e-05
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 14/186 (7%)
Query: 21 ILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR--AFCAGGDVAAVVRG 78
++ L + +N+++ M L + E D V+ ++ R F AG D+A +
Sbjct: 24 VVWLAK-EPVNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAP 82
Query: 79 INEGAKFFSKEFILN---YLMATYTKPQVSI--LNGIVMGGGAGVSIHGRFRVATENSVF 133
A++ EF L +L+ ++ + G GG VS+ +R+ T
Sbjct: 83 KTSAARY--AEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTM 140
Query: 134 AMPETALGL-FPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLA 191
+ E ALG+ P A F+ R+ E + L G + AE + GL VP++ A
Sbjct: 141 GLNEVALGIPVPKFWARLFMGRVIDRKVAESLLLRGRLVRPAEAKQLGLIDEVVPAA--A 198
Query: 192 LLEEAL 197
L+E A
Sbjct: 199 LMEAAA 204
|
Length = 278 |
| >gnl|CDD|235744 PRK06213, PRK06213, enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 40/171 (23%), Positives = 60/171 (35%), Gaps = 20/171 (11%)
Query: 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF 90
NALS MI L + E D V +++ G+ F G D+ + G +
Sbjct: 24 NALSPAMIDALNAALDQAEDDRAV--VVITGQPGIFSGGFDLKVMTSGAQAAIALLTAGS 81
Query: 91 ILNYLMATYTKPQVSILNG--IVMG------GGAGVSIHGRFRVATENSVFAMPETALGL 142
L + ++ KP + G I G + +HG F++ + E A+G+
Sbjct: 82 TLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKI-------GLNEVAIGM 134
Query: 143 -FPDIGASYFLSRL-PGFFGEYVGLTGARLDGAEMRACGLATHFVPSSRLA 191
P RL P F V D E A G VP +L
Sbjct: 135 TMPHAAIELARDRLTPSAFQRAVIN-AEMFDPEEAVAAGFLDEVVPPEQLL 184
|
Length = 229 |
| >gnl|CDD|236338 PRK08788, PRK08788, enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 104 VSILNGIVMGGG--AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGF-FG 160
++++ G +GGG A +S H +A + PE LFP +GA FL+R G
Sbjct: 125 IALVQGDALGGGFEAALSHH--TIIAERGAKMGFPEILFNLFPGMGAYSFLARRVGPKLA 182
Query: 161 EYVGLTGARLDGAEMRACGLATHFVP 186
E + L+G E+ GL V
Sbjct: 183 EELILSGKLYTAEELHDMGLVDVLVE 208
|
Length = 287 |
| >gnl|CDD|235632 PRK05869, PRK05869, enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 7e-04
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 19/177 (10%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
+ L L+RP NAL+ Q+ ++ +V +IL G F AG D+ + R
Sbjct: 18 LATLLLSRP-PTNALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPEL-RT 75
Query: 79 INEGAKFFSKEFILNYL--MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMP 136
++ + + +A KP V+ + G +G G +++ +RV+ +N F
Sbjct: 76 LSAQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGAT 135
Query: 137 ETALGLFPDIGASYFLSRLPG--------FFGEYVGLTGARLDGAEMRACGLATHFV 185
E GL P L+R G F G + D E A GL V
Sbjct: 136 EILAGLAPSGDGMARLTRAAGPSRAKELVFSGRFF-------DAEEALALGLIDEMV 185
|
Length = 222 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 375 | |||
| PLN02988 | 381 | 3-hydroxyisobutyryl-CoA hydrolase | 100.0 | |
| PLN02851 | 407 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 100.0 | |
| PLN02157 | 401 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 100.0 | |
| PLN02874 | 379 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 100.0 | |
| KOG1684 | 401 | consensus Enoyl-CoA hydratase [Lipid transport and | 100.0 | |
| PRK05617 | 342 | 3-hydroxyisobutyryl-CoA hydrolase; Provisional | 100.0 | |
| PRK05862 | 257 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06127 | 269 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05809 | 260 | 3-hydroxybutyryl-CoA dehydratase; Validated | 100.0 | |
| PRK09674 | 255 | enoyl-CoA hydratase-isomerase; Provisional | 100.0 | |
| PRK08150 | 255 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK09076 | 258 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08139 | 266 | enoyl-CoA hydratase; Validated | 100.0 | |
| PRK06142 | 272 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05980 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| KOG1680 | 290 | consensus Enoyl-CoA hydratase [Lipid transport and | 100.0 | |
| PRK07658 | 257 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08140 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07799 | 263 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06563 | 255 | enoyl-CoA hydratase; Provisional | 100.0 | |
| TIGR02280 | 256 | PaaB1 phenylacetate degradation probable enoyl-CoA | 100.0 | |
| PRK08258 | 277 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08138 | 261 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PLN02600 | 251 | enoyl-CoA hydratase | 100.0 | |
| PRK07657 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK09245 | 266 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06494 | 259 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05995 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08252 | 254 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PLN02664 | 275 | enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA | 100.0 | |
| PRK05981 | 266 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07659 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07468 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07511 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06688 | 259 | enoyl-CoA hydratase; Provisional | 100.0 | |
| TIGR03210 | 256 | badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb | 100.0 | |
| PRK05674 | 265 | gamma-carboxygeranoyl-CoA hydratase; Validated | 100.0 | |
| PRK03580 | 261 | carnitinyl-CoA dehydratase; Provisional | 100.0 | |
| TIGR01929 | 259 | menB naphthoate synthase (dihydroxynaphthoic acid | 100.0 | |
| PRK06210 | 272 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07327 | 268 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06495 | 257 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK09120 | 275 | p-hydroxycinnamoyl CoA hydratase/lyase; Validated | 100.0 | |
| PRK11423 | 261 | methylmalonyl-CoA decarboxylase; Provisional | 100.0 | |
| PRK08260 | 296 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK05864 | 276 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06072 | 248 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06144 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07396 | 273 | dihydroxynaphthoic acid synthetase; Validated | 100.0 | |
| PRK06143 | 256 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07509 | 262 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07260 | 255 | enoyl-CoA hydratase; Provisional | 100.0 | |
| TIGR03189 | 251 | dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy | 100.0 | |
| PRK08259 | 254 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PLN02888 | 265 | enoyl-CoA hydratase | 100.0 | |
| PRK07827 | 260 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK06023 | 251 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07854 | 243 | enoyl-CoA hydratase; Provisional | 100.0 | |
| COG1024 | 257 | CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi | 100.0 | |
| PRK05870 | 249 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PLN02921 | 327 | naphthoate synthase | 100.0 | |
| PRK12478 | 298 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07112 | 255 | polyketide biosynthesis enoyl-CoA hydratase; Valid | 100.0 | |
| PF00378 | 245 | ECH: Enoyl-CoA hydratase/isomerase family; InterPr | 100.0 | |
| PRK07938 | 249 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08321 | 302 | naphthoate synthase; Validated | 100.0 | |
| PRK06190 | 258 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK07110 | 249 | polyketide biosynthesis enoyl-CoA hydratase; Valid | 100.0 | |
| PLN03214 | 278 | probable enoyl-CoA hydratase/isomerase; Provisiona | 100.0 | |
| TIGR03222 | 546 | benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p | 100.0 | |
| PRK08184 | 550 | benzoyl-CoA-dihydrodiol lyase; Provisional | 100.0 | |
| PRK05869 | 222 | enoyl-CoA hydratase; Validated | 100.0 | |
| PRK08290 | 288 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK11730 | 715 | fadB multifunctional fatty acid oxidation complex | 100.0 | |
| KOG1679 | 291 | consensus Enoyl-CoA hydratase [Lipid transport and | 100.0 | |
| PRK08272 | 302 | enoyl-CoA hydratase; Provisional | 100.0 | |
| PRK08788 | 287 | enoyl-CoA hydratase; Validated | 100.0 | |
| PRK06213 | 229 | enoyl-CoA hydratase; Provisional | 100.0 | |
| TIGR03200 | 360 | dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy | 100.0 | |
| PRK11154 | 708 | fadJ multifunctional fatty acid oxidation complex | 100.0 | |
| KOG1681 | 292 | consensus Enoyl-CoA isomerase [Lipid transport and | 100.0 | |
| TIGR02440 | 699 | FadJ fatty oxidation complex, alpha subunit FadJ. | 100.0 | |
| TIGR02437 | 714 | FadB fatty oxidation complex, alpha subunit FadB. | 100.0 | |
| PLN02267 | 239 | enoyl-CoA hydratase/isomerase family protein | 100.0 | |
| COG0447 | 282 | MenB Dihydroxynaphthoic acid synthase [Coenzyme me | 100.0 | |
| TIGR02441 | 737 | fa_ox_alpha_mit fatty acid oxidation complex, alph | 100.0 | |
| KOG1682 | 287 | consensus Enoyl-CoA isomerase [Lipid transport and | 100.0 | |
| KOG0016 | 266 | consensus Enoyl-CoA hydratase/isomerase [Lipid tra | 100.0 | |
| cd06558 | 195 | crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy | 100.0 | |
| TIGR03222 | 546 | benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p | 100.0 | |
| PRK08184 | 550 | benzoyl-CoA-dihydrodiol lyase; Provisional | 100.0 | |
| PF13766 | 118 | ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PD | 99.9 | |
| cd07014 | 177 | S49_SppA Signal peptide peptidase A. Signal peptid | 99.8 | |
| cd07020 | 187 | Clp_protease_NfeD_1 Nodulation formation efficienc | 99.77 | |
| cd07019 | 211 | S49_SppA_1 Signal peptide peptidase A (SppA), a se | 99.65 | |
| cd00394 | 161 | Clp_protease_like Caseinolytic protease (ClpP) is | 99.56 | |
| cd07022 | 214 | S49_Sppa_36K_type Signal peptide peptidase A (SppA | 99.53 | |
| TIGR00705 | 584 | SppA_67K signal peptide peptidase SppA, 67K type. | 99.48 | |
| cd07023 | 208 | S49_Sppa_N_C Signal peptide peptidase A (SppA), a | 99.48 | |
| cd07016 | 160 | S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP- | 99.44 | |
| TIGR00706 | 207 | SppA_dom signal peptide peptidase SppA, 36K type. | 99.38 | |
| cd07018 | 222 | S49_SppA_67K_type Signal peptide peptidase A (SppA | 99.24 | |
| cd07021 | 178 | Clp_protease_NfeD_like Nodulation formation effici | 99.22 | |
| cd07015 | 172 | Clp_protease_NfeD Nodulation formation efficiency | 98.7 | |
| cd07013 | 162 | S14_ClpP Caseinolytic protease (ClpP) is an ATP-de | 98.58 | |
| KOG1683 | 380 | consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA | 98.56 | |
| PRK00277 | 200 | clpP ATP-dependent Clp protease proteolytic subuni | 98.53 | |
| PRK10949 | 618 | protease 4; Provisional | 98.5 | |
| PRK12553 | 207 | ATP-dependent Clp protease proteolytic subunit; Re | 98.43 | |
| PRK12319 | 256 | acetyl-CoA carboxylase subunit alpha; Provisional | 98.35 | |
| cd07017 | 171 | S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP- | 98.33 | |
| CHL00198 | 322 | accA acetyl-CoA carboxylase carboxyltransferase al | 98.28 | |
| PF00574 | 182 | CLP_protease: Clp protease; InterPro: IPR001907 In | 98.28 | |
| PRK14512 | 197 | ATP-dependent Clp protease proteolytic subunit; Pr | 98.21 | |
| PLN03230 | 431 | acetyl-coenzyme A carboxylase carboxyl transferase | 98.2 | |
| CHL00028 | 200 | clpP ATP-dependent Clp protease proteolytic subuni | 98.16 | |
| TIGR00493 | 191 | clpP ATP-dependent Clp protease, proteolytic subun | 98.12 | |
| PLN03229 | 762 | acetyl-coenzyme A carboxylase carboxyl transferase | 98.12 | |
| PRK05724 | 319 | acetyl-CoA carboxylase carboxyltransferase subunit | 98.11 | |
| TIGR00513 | 316 | accA acetyl-CoA carboxylase, carboxyl transferase, | 98.11 | |
| PRK11778 | 330 | putative inner membrane peptidase; Provisional | 97.97 | |
| COG0616 | 317 | SppA Periplasmic serine proteases (ClpP class) [Po | 97.97 | |
| TIGR03133 | 274 | malonate_beta malonate decarboxylase, beta subunit | 97.89 | |
| PRK14514 | 221 | ATP-dependent Clp protease proteolytic subunit; Pr | 97.89 | |
| PRK14513 | 201 | ATP-dependent Clp protease proteolytic subunit; Pr | 97.83 | |
| PRK12551 | 196 | ATP-dependent Clp protease proteolytic subunit; Re | 97.81 | |
| PRK07189 | 301 | malonate decarboxylase subunit beta; Reviewed | 97.77 | |
| PRK05654 | 292 | acetyl-CoA carboxylase subunit beta; Validated | 97.66 | |
| TIGR03134 | 238 | malonate_gamma malonate decarboxylase, gamma subun | 97.64 | |
| PF01972 | 285 | SDH_sah: Serine dehydrogenase proteinase; InterPro | 97.55 | |
| TIGR00705 | 584 | SppA_67K signal peptide peptidase SppA, 67K type. | 97.51 | |
| PF01343 | 154 | Peptidase_S49: Peptidase family S49 peptidase clas | 97.5 | |
| TIGR00515 | 285 | accD acetyl-CoA carboxylase, carboxyl transferase, | 97.38 | |
| COG1030 | 436 | NfeD Membrane-bound serine protease (ClpP class) [ | 97.28 | |
| CHL00174 | 296 | accD acetyl-CoA carboxylase beta subunit; Reviewed | 97.23 | |
| TIGR01117 | 512 | mmdA methylmalonyl-CoA decarboxylase alpha subunit | 97.19 | |
| PF01039 | 493 | Carboxyl_trans: Carboxyl transferase domain; Inter | 97.18 | |
| COG0740 | 200 | ClpP Protease subunit of ATP-dependent Clp proteas | 97.06 | |
| PRK12552 | 222 | ATP-dependent Clp protease-like protein; Reviewed | 96.98 | |
| PRK10949 | 618 | protease 4; Provisional | 96.98 | |
| PLN02820 | 569 | 3-methylcrotonyl-CoA carboxylase, beta chain | 96.62 | |
| TIGR01117 | 512 | mmdA methylmalonyl-CoA decarboxylase alpha subunit | 96.51 | |
| COG4799 | 526 | Acetyl-CoA carboxylase, carboxyltransferase compon | 96.33 | |
| COG0825 | 317 | AccA Acetyl-CoA carboxylase alpha subunit [Lipid m | 95.85 | |
| COG0777 | 294 | AccD Acetyl-CoA carboxylase beta subunit [Lipid me | 95.49 | |
| PF01039 | 493 | Carboxyl_trans: Carboxyl transferase domain; Inter | 94.76 | |
| PLN02820 | 569 | 3-methylcrotonyl-CoA carboxylase, beta chain | 93.67 | |
| PLN02157 | 401 | 3-hydroxyisobutyryl-CoA hydrolase-like protein | 93.36 | |
| KOG0840 | 275 | consensus ATP-dependent Clp protease, proteolytic | 90.89 |
| >PLN02988 3-hydroxyisobutyryl-CoA hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-73 Score=553.47 Aligned_cols=368 Identities=75% Similarity=1.217 Sum_probs=326.0
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-----
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG----- 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~----- 82 (375)
...|.++.+++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|+|++||+|+|++++.......
T Consensus 8 ~~~v~~~~~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~ 87 (381)
T PLN02988 8 QSQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLG 87 (381)
T ss_pred CCceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHH
Confidence 346889999999999999999999999999999999999999999999999999999999999999985321111
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY 162 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~ 162 (375)
..++...+.+...|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++
T Consensus 88 ~~~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~ 167 (381)
T PLN02988 88 ANFFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEY 167 (381)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHH
Confidence 23444455667788999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|+|||++++|+||+++||||++||++++..+..++.++...+|..+...++.+.......+......+..|++||+.+++
T Consensus 168 l~LTG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~ 247 (381)
T PLN02988 168 VGLTGARLDGAEMLACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTV 247 (381)
T ss_pred HHHcCCCCCHHHHHHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999998888888877777888888888887654322234455668999999999999
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
++|+++|+.+..+..++|++++++.|.+.||.++++|+++++++...++.++++.|+++..+++....++||.|||||.|
T Consensus 248 ~~i~~~L~~~~~~~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~L 327 (381)
T PLN02988 248 EEIISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAIL 327 (381)
T ss_pred HHHHHHHHhhccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHh
Confidence 99999999853223569999999999999999999999999999999999999999999999997211249999999999
Q ss_pred ccCCCCCCCCCCCccCCCHHHHHhcccCCCCC-CccccccCCCCCCchhhhccC
Q 017189 323 LDKDKNPKWKPSKLELVNDNMVDQYFSKINDD-RWEDIKLPARSNLPATAIAKL 375 (375)
Q Consensus 323 ~ek~r~P~w~~~~~~~v~~~~v~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 375 (375)
+||+++|+|+|+++++|+++.|+++|+|+++. +|.+|+||+|-..++.|++|+
T Consensus 328 iDKd~~P~W~p~~l~~v~~~~v~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 381 (381)
T PLN02988 328 VDKDKNPKWEPRRLEDMKDSMVEQYFERVEEEEEWDDLKLPPRNNLPALAIAKL 381 (381)
T ss_pred cCCCCCCCCCCCChhhCCHHHHHHHhCCCCccccccccCCcccccccchhhccC
Confidence 99999999999999999999999999999764 255799999877888888875
|
|
| >PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-72 Score=547.74 Aligned_cols=361 Identities=47% Similarity=0.812 Sum_probs=321.8
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc----h-h
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN----E-G 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~----~-~ 82 (375)
.+.|.++..+++++||||||+++|+||.+|+.+|.++|+.++.|+++++|||+|+|++||+|+|++++..... . .
T Consensus 41 ~~~v~~e~~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~GkaFcAGgDl~~l~~~~~~~~~~~~ 120 (407)
T PLN02851 41 QDQVLVEGRAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEEC 120 (407)
T ss_pred CCCeEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHHhhccccchHHH
Confidence 4578899999999999999999999999999999999999999999999999999999999999999865321 1 1
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY 162 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~ 162 (375)
..++..++.+.+.|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+.+
T Consensus 121 ~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~~g~~ 200 (407)
T PLN02851 121 KLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGYLGEY 200 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCHHHHH
Confidence 44667778888899999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|+|||++++|++|+++||++++||++++..+.+.+.++...++..+.+++++|.....++...+......|++||+.+++
T Consensus 201 L~LTG~~i~a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~sv 280 (407)
T PLN02851 201 LALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTV 280 (407)
T ss_pred HHHhCCcCCHHHHHHCCCceeecCHhhHHHHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999998888888888777788899999999754323344566678999999999999
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
++|+++|+.+.....++|++++++.|.+.||.++++|+++++++...++.++++.|+++..+++....++||.|||||.|
T Consensus 281 ~~I~~~L~~~~~~~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~L 360 (407)
T PLN02851 281 EEIIEALENEAASSYDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARL 360 (407)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHh
Confidence 99999999854333468999999999999999999999999999999999999999999999873111349999999999
Q ss_pred ccCCCCCCCCCCCccCCCHHHHHhcccCCCCCCccccccCCCCCCchhh
Q 017189 323 LDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLPARSNLPATA 371 (375)
Q Consensus 323 ~ek~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~~~~~~~~~~~~~ 371 (375)
+||+++|+|+|+++++|+++.|+++|+|++..++ +|++|++ .+++|
T Consensus 361 IDKd~~P~W~p~sl~~V~~~~v~~~f~~~~~~~~-~l~~~~~--~~~~~ 406 (407)
T PLN02851 361 VDKDFAPKWDPPSLGEVSKDMVDCYFTPLDESES-ELELPTA--QREPY 406 (407)
T ss_pred cCCCCCCCCCCCChhhCCHHHHHHHhCCCCCCcc-cccCCcc--ccccc
Confidence 9999999999999999999999999999965323 7999974 55443
|
|
| >PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-70 Score=537.03 Aligned_cols=357 Identities=48% Similarity=0.842 Sum_probs=313.0
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch---h--
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE---G-- 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---~-- 82 (375)
...|.++.+++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||+|+|++||+|+|++++...... .
T Consensus 36 ~~~V~~e~~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~ 115 (401)
T PLN02157 36 DYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAI 115 (401)
T ss_pred CCceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999988643211 1
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY 162 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~ 162 (375)
..++...+.+...|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++
T Consensus 116 ~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~ 195 (401)
T PLN02157 116 REFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEY 195 (401)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHH
Confidence 23455556677889999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||++++|+||+++||||++||+++++.+.+.+.++...+|.++...++.+..........+......|++||+.+++
T Consensus 196 L~LTG~~i~A~eA~~~GLv~~vVp~~~l~~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~ 275 (401)
T PLN02157 196 LGLTGLKLSGAEMLACGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTV 275 (401)
T ss_pred HHHcCCcCCHHHHHHcCCceEEeCHhHHHHHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCH
Confidence 99999999999999999999999999997777777777777888888777766543222223344457899999999999
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+||+++|+.+......+|++++++.|.+.||.+++++.++++++...++.++++.|+++..+++....++||.|||||.|
T Consensus 276 ~ei~~al~~~~~kr~~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~L 355 (401)
T PLN02157 276 EEIIDSLEIEAGRRKDTWCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARL 355 (401)
T ss_pred HHHHHHHHhhhcccchHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 99999998643222468999999999999999999999999999999999999999999999885211359999999999
Q ss_pred ccCCCCCCCCCCCccCCCHHHHHhcccCCCCCCccccccCCCC
Q 017189 323 LDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLPARS 365 (375)
Q Consensus 323 ~ek~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~~~~~~~ 365 (375)
+||+++|+|+|+++++|+++.|+++|.|+++ ...+|++|.|+
T Consensus 356 iDKd~~P~W~p~~l~~V~~~~v~~~f~~~~~-~~~~l~~~~~~ 397 (401)
T PLN02157 356 IDKDEAPKWDPPSLEKVSEDMVDDYFCALTP-TEPDLDLPVKL 397 (401)
T ss_pred cCCCCCCCCCCCChhhCCHHHHHHHhCCCCC-Cccccccchhh
Confidence 9999999999999999999999999999972 23479999773
|
|
| >PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-70 Score=536.66 Aligned_cols=356 Identities=46% Similarity=0.826 Sum_probs=317.8
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc--hh-h
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN--EG-A 83 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~--~~-~ 83 (375)
.++.|.++.+++|++||||||+++|+||.+|+.+|.++++.++.|++||+|||||+|++||+|+|++++..... .. .
T Consensus 9 ~~~~v~~~~~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~ 88 (379)
T PLN02874 9 AEEVVLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRESDDSCL 88 (379)
T ss_pred CCCceEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhcccchHHH
Confidence 35679999999999999999999999999999999999999999999999999999999999999998854221 11 2
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYV 163 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l 163 (375)
.+....+.+..+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++|
T Consensus 89 ~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a~~l 168 (379)
T PLN02874 89 EVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLGEYL 168 (379)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHHHHH
Confidence 23334455677899999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
++||++++|+||+++|||+++||++++..+..++.++...+...++.+++.|............+....|.+||+.+++.
T Consensus 169 ~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 248 (379)
T PLN02874 169 ALTGARLNGKEMVACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVE 248 (379)
T ss_pred HHcCCcccHHHHHHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHH
Confidence 99999999999999999999999998877777787787778888999999988765555566667789999999999999
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhc
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILL 323 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ 323 (375)
+|+++|+++.+...++||.+++++|+++||.+++.+|++++.+...++.++++.|+.....++....++||+|||+||++
T Consensus 249 eii~al~~~~~~~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~Afli 328 (379)
T PLN02874 249 EIIKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVI 328 (379)
T ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEE
Confidence 99999998765556799999999999999999999999999988889999999999998887761114599999999977
Q ss_pred cCCCCCCCCCCCccCCCHHHHHhcccCCCCCCccccccCCC
Q 017189 324 DKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLPAR 364 (375)
Q Consensus 324 ek~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~~~~~~ 364 (375)
||+|+|+|+++++++|++++|+++|+|++.. +||++|++
T Consensus 329 dK~r~P~w~~~~~~~v~~~~v~~~f~~~~~~--~~~~~~~~ 367 (379)
T PLN02874 329 DKDNAPKWNPSTLDEVTDEKVDLVFQPFKAR--EELQLPEE 367 (379)
T ss_pred cCCCCCCCCCCChhhCCHHHHHHHhCCCCCc--cccCCCcc
Confidence 8878999999999999999999999999765 68999986
|
|
| >KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-67 Score=492.03 Aligned_cols=352 Identities=51% Similarity=0.900 Sum_probs=326.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh----
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG---- 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~---- 82 (375)
...|.++.++..+.||||||+++||||.+|+..+.-.|..++.++.+++||+.|+| ++||+|+|++.......++
T Consensus 37 ~~~VL~e~~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~d~~~~~ 116 (401)
T KOG1684|consen 37 KDQVLVEGKGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIKDKETPE 116 (401)
T ss_pred CCceEEecCCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhhcCCchH
Confidence 46799999999999999999999999999999999999999999999999999996 9999999998665433222
Q ss_pred -hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHH
Q 017189 83 -AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGE 161 (375)
Q Consensus 83 -~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~ 161 (375)
..|++..|.+...|.++.||.||.+||..||||++|+.+.-||||||++.|+|||+.+|++||.|++|+|+|++|..+.
T Consensus 117 ~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg~lg~ 196 (401)
T KOG1684|consen 117 VKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPGYLGL 196 (401)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCccHHHH
Confidence 7789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCCh-HHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDP-AVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
||.|||+++++.||...||++|+|++++|..++++|......+| ..+.+.+++|.....++...+.+.+..|++||+++
T Consensus 197 YLgLTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~~ 276 (401)
T KOG1684|consen 197 YLGLTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCFSAN 276 (401)
T ss_pred hhhhccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhhccc
Confidence 99999999999999999999999999999999999985555666 67999999999988777778888999999999999
Q ss_pred CHHHHHHHHhhcc-cccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 241 TVEEILSALESES-TNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 241 ~~~ei~~~L~~~~-~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+++|||++|+... .+...+||++++++|...||.++++|.+.++.+..+++++++..|+++..+...++ ||.||++
T Consensus 277 tVeeIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~~~~---DF~EGvR 353 (401)
T KOG1684|consen 277 TVEEIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRMLMRG---DFCEGVR 353 (401)
T ss_pred cHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhcc---chhhhhh
Confidence 9999999986554 34668999999999999999999999999999999999999999999999988765 9999999
Q ss_pred hhhccCCCCCCCCCCCccCCCHHHHHhcccCCCCCCccccccCCC
Q 017189 320 AILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLPAR 364 (375)
Q Consensus 320 A~l~ek~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~~~~~~ 364 (375)
|.|++|+++|+|+|.++++|++++|+.||.|++.. .+|++|-.
T Consensus 354 A~LIDKd~~PKW~p~~l~~V~e~~Vdn~F~~~p~~--~eLklp~~ 396 (401)
T KOG1684|consen 354 AVLIDKDQNPKWDPASLADVTEDEVDNYFKPLPSK--SELKLPVW 396 (401)
T ss_pred heeecCCcCCCCCCcchhhcCHHHHHHhccCCCCc--ccccCchh
Confidence 99999999999999999999999999999997653 68888844
|
|
| >PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=498.72 Aligned_cols=333 Identities=43% Similarity=0.761 Sum_probs=297.1
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccc---hh-h
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN---EG-A 83 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~---~~-~ 83 (375)
+.|.++++++|++||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..... .. .
T Consensus 3 ~~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (342)
T PRK05617 3 DEVLAEVEGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAA 82 (342)
T ss_pred ceEEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhH
Confidence 3688999999999999999999999999999999999999999999999999999 99999999998754221 11 1
Q ss_pred -HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHH
Q 017189 84 -KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY 162 (375)
Q Consensus 84 -~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~ 162 (375)
.++...++++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+++
T Consensus 83 ~~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~ 162 (342)
T PRK05617 83 DRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTY 162 (342)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHH
Confidence 3444556778889999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcC-CCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVN-SSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
|++||+.++|+||+++|||+++||++++....+.+.++. .++.+.++.++.+|....+ .+++....+.|++||+..+
T Consensus 163 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~ 240 (342)
T PRK05617 163 LALTGARISAADALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAP--ASELAAQRAWIDECFAGDT 240 (342)
T ss_pred HHHcCCCCCHHHHHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCC--cchhHHHHHHHHHHhCCCC
Confidence 999999999999999999999999988866545554433 3445668888999877643 3467788899999999999
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+++|+++|+.+ .++|+.+++++|+++||.+++.+|++++.....+++++++.|...+..++.++ |+.||+++|
T Consensus 241 ~~~~~~~l~~~----~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---d~~egv~af 313 (342)
T PRK05617 241 VEDIIAALEAD----GGEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLRSP---DFVEGVRAV 313 (342)
T ss_pred HHHHHHHHHhc----cHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCC---chhhccceE
Confidence 99999999997 35899999999999999999999999999888899999999999999999765 999999999
Q ss_pred hccCCCCCCCCCCCccCCCHHHHHhcccC
Q 017189 322 LLDKDKNPKWKPSKLELVNDNMVDQYFSK 350 (375)
Q Consensus 322 l~ek~r~P~w~~~~~~~v~~~~v~~~f~~ 350 (375)
+++|+|.|+|+++++++|++++|++||+|
T Consensus 314 l~ek~r~p~~~~~~~~~~~~~~~~~~~~~ 342 (342)
T PRK05617 314 LIDKDRNPKWSPATLEDVTPEDVEAFFAP 342 (342)
T ss_pred EEcCCCCCCCCCCChHhCCHHHHHHhhCC
Confidence 65765889999999999999999999998
|
|
| >PRK05862 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-55 Score=409.03 Aligned_cols=254 Identities=26% Similarity=0.419 Sum_probs=227.5
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFS 87 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 87 (375)
++.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ..+..
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~-~~~~~ 81 (257)
T PRK05862 3 YETILVETRGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADLSFM-DVYKG 81 (257)
T ss_pred CceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhccchh-HHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999987543211 22223
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+..++.+|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| .++++|++|
T Consensus 82 ~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~ 161 (257)
T PRK05862 82 DYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMDLCLT 161 (257)
T ss_pred HHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHHHHHh
Confidence 4445778899999999999999999999999999999999999999999999999999999999999999 579999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||+++|++++.+ ++.
T Consensus 162 g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------- 190 (257)
T PRK05862 162 GRMMDAAEAERAGLVSRVVPADKLLD--EAL------------------------------------------------- 190 (257)
T ss_pred CCccCHHHHHHcCCCCEeeCHhHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999877633 322
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+.++++++.+|.++..+|++++.....++.+++..|...+..++.++ |++||+++| .+|
T Consensus 191 ----------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~---~~~e~i~af-~~k- 249 (257)
T PRK05862 191 ----------------AAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFATE---DQKEGMAAF-VEK- 249 (257)
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCh---hHHHHHHHH-hcc-
Confidence 23688999999999999999999888899999999999999999765 999999999 599
Q ss_pred CCCCCCCC
Q 017189 327 KNPKWKPS 334 (375)
Q Consensus 327 r~P~w~~~ 334 (375)
|+|+|+++
T Consensus 250 r~p~~~~~ 257 (257)
T PRK05862 250 RKPVFKHR 257 (257)
T ss_pred CCCCCCCC
Confidence 88999863
|
|
| >PRK06127 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-54 Score=408.97 Aligned_cols=262 Identities=26% Similarity=0.392 Sum_probs=233.1
Q ss_pred CCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhcc
Q 017189 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGI 79 (375)
Q Consensus 1 M~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~ 79 (375)
|++-....+.|.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++....
T Consensus 3 ~~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~ 82 (269)
T PRK06127 3 MSSISSPTGKLLAEKTGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR 82 (269)
T ss_pred ccccCCCCCceEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc
Confidence 555555567899999999999999999999999999999999999999999999999999999 7999999999875432
Q ss_pred ch--h-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc
Q 017189 80 NE--G-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLP 156 (375)
Q Consensus 80 ~~--~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~ 156 (375)
.. . ..+......++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 162 (269)
T PRK06127 83 SDAEAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLV 162 (269)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHh
Confidence 11 1 23444556678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHH
Q 017189 157 G-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235 (375)
Q Consensus 157 g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (375)
| .+++++++||+.++|+||+++||||+|||++++.. ++.
T Consensus 163 G~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------- 202 (269)
T PRK06127 163 GPSAAKDLFYTARRFDAAEALRIGLVHRVTAADDLET--ALA-------------------------------------- 202 (269)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCCCEeeCHHHHHH--HHH--------------------------------------
Confidence 9 67999999999999999999999999999887743 222
Q ss_pred HhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHH
Q 017189 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFF 315 (375)
Q Consensus 236 ~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~ 315 (375)
+.+++++..||.+++.+|++++.....++.+.++.|...+..++.++ |++
T Consensus 203 ---------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~ 252 (269)
T PRK06127 203 ---------------------------DYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFDSE---DYR 252 (269)
T ss_pred ---------------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCh---HHH
Confidence 23789999999999999999999888889999999999999999765 999
Q ss_pred hhHhhhhccCCCCCCCCCC
Q 017189 316 EGCRAILLDKDKNPKWKPS 334 (375)
Q Consensus 316 egv~A~l~ek~r~P~w~~~ 334 (375)
||+++| ++| |.|+|+++
T Consensus 253 e~~~af-~ek-r~p~~~~~ 269 (269)
T PRK06127 253 EGRAAF-MEK-RKPVFKGR 269 (269)
T ss_pred HHHHHH-hcC-CCCCCCCC
Confidence 999999 599 88999763
|
|
| >PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-54 Score=407.27 Aligned_cols=255 Identities=27% Similarity=0.424 Sum_probs=229.5
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AK 84 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~ 84 (375)
+++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++....... ..
T Consensus 2 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~~~~~~~~ 81 (260)
T PRK05809 2 ELKNVILEKEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDLNEEEGRK 81 (260)
T ss_pred CcceEEEEEeCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhccChHHHHH
Confidence 467799999999999999999999999999999999999999999999999999999 9999999999875432211 23
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+......++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| ..+++|
T Consensus 82 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 161 (260)
T PRK05809 82 FGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKEL 161 (260)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 3344456788899999999999999999999999999999999999999999999999999999999999999 679999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
++||+.++|+||+++||||+++|++++.. .+.
T Consensus 162 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~---------------------------------------------- 193 (260)
T PRK05809 162 IYTGDMINAEEALRIGLVNKVVEPEKLME--EAK---------------------------------------------- 193 (260)
T ss_pred HHhCCCCCHHHHHHcCCCCcccChHHHHH--HHH----------------------------------------------
Confidence 99999999999999999999999877632 222
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhc
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILL 323 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ 323 (375)
+.++++++.||.+++.+|+.++.....++.++++.|.+.+..++.++ |++||+++| +
T Consensus 194 -------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~egi~af-~ 250 (260)
T PRK05809 194 -------------------ALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFSTE---DQTEGMTAF-V 250 (260)
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHH-h
Confidence 33789999999999999999999888899999999999999999765 999999999 5
Q ss_pred cCCCCCCCCC
Q 017189 324 DKDKNPKWKP 333 (375)
Q Consensus 324 ek~r~P~w~~ 333 (375)
+| |+|+|++
T Consensus 251 ~~-r~p~~~~ 259 (260)
T PRK05809 251 EK-REKNFKN 259 (260)
T ss_pred cC-CCCCCCC
Confidence 99 8999975
|
|
| >PRK09674 enoyl-CoA hydratase-isomerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-54 Score=406.13 Aligned_cols=252 Identities=25% Similarity=0.431 Sum_probs=226.1
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSK 88 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 88 (375)
..|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ..+...
T Consensus 2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~~~~~~ 80 (255)
T PRK09674 2 SELLVSRQQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEKDLA-ATLNDP 80 (255)
T ss_pred ceEEEEeECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhccchh-hhHHHH
Confidence 3688899999999999999999999999999999999999999999999999999999999999987542211 122233
Q ss_pred HHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcC
Q 017189 89 EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTG 167 (375)
Q Consensus 89 ~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG 167 (375)
...++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| .++++++++|
T Consensus 81 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~l~l~g 160 (255)
T PRK09674 81 RPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTG 160 (255)
T ss_pred HHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHHHHHcC
Confidence 456778899999999999999999999999999999999999999999999999999999999999999 5799999999
Q ss_pred CccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILS 247 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~ 247 (375)
+.++|+||+++||||++||++++.. .+.
T Consensus 161 ~~~~a~eA~~~Glv~~vv~~~~~~~--~a~-------------------------------------------------- 188 (255)
T PRK09674 161 ESITAQQAQQAGLVSEVFPPELTLE--RAL-------------------------------------------------- 188 (255)
T ss_pred CccCHHHHHHcCCCcEecChHHHHH--HHH--------------------------------------------------
Confidence 9999999999999999999887632 222
Q ss_pred HHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCC
Q 017189 248 ALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDK 327 (375)
Q Consensus 248 ~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r 327 (375)
+.+++|++.||.+++.+|+.++.....++.++++.|...+..++.++ |++||+++| .+| |
T Consensus 189 ---------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~e~i~af-~~k-r 248 (255)
T PRK09674 189 ---------------QLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAATE---DRHEGISAF-LEK-R 248 (255)
T ss_pred ---------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHH-hcc-C
Confidence 33789999999999999999999888899999999999999998755 999999999 588 8
Q ss_pred CCCCCC
Q 017189 328 NPKWKP 333 (375)
Q Consensus 328 ~P~w~~ 333 (375)
+|+|++
T Consensus 249 ~p~~~~ 254 (255)
T PRK09674 249 TPDFKG 254 (255)
T ss_pred CCCCCC
Confidence 999975
|
|
| >PRK08150 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-54 Score=405.92 Aligned_cols=252 Identities=28% Similarity=0.336 Sum_probs=224.8
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFFS 87 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~ 87 (375)
+.|.++++++|++||||||++.|+||.+|+.+|.++++.++ +++|+|||||.|++||+|.|++++....... ..+..
T Consensus 2 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 79 (255)
T PRK08150 2 SLVSYELDGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRERDAGEGMHHSR 79 (255)
T ss_pred ceEEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhccchhHHHHHH
Confidence 46889999999999999999999999999999999999987 7899999999999999999999985432211 23344
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++|
T Consensus 80 ~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~lt 159 (255)
T PRK08150 80 RWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTDMMLT 159 (255)
T ss_pred HHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHHHHHc
Confidence 5567788899999999999999999999999999999999999999999999999999999999999999 579999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||++||++++.+ .+.
T Consensus 160 g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------- 188 (255)
T PRK08150 160 GRVYDAQEGERLGLAQYLVPAGEALD--KAM------------------------------------------------- 188 (255)
T ss_pred CCcCCHHHHHHcCCccEeeCchHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999887733 332
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+.+++|++.||.+++.+|++++.....+++++++.|...+..++.++ |++||+++| .+|
T Consensus 189 ----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~---d~~eg~~af-~~k- 247 (255)
T PRK08150 189 ----------------ELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQSAP---EAKERLRAF-LEK- 247 (255)
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHH-hcc-
Confidence 23789999999999999999998888889999999998888888654 999999999 598
Q ss_pred CCCCCCCC
Q 017189 327 KNPKWKPS 334 (375)
Q Consensus 327 r~P~w~~~ 334 (375)
|+|+|+++
T Consensus 248 r~p~~~~~ 255 (255)
T PRK08150 248 KAAKVKPP 255 (255)
T ss_pred CCCCCCCC
Confidence 89999763
|
|
| >PRK09076 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-54 Score=405.93 Aligned_cols=252 Identities=27% Similarity=0.392 Sum_probs=225.8
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AKFF 86 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~~~ 86 (375)
..|.++++++|++||||||++ |++|.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++....... ..+.
T Consensus 3 ~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~ 81 (258)
T PRK09076 3 IELDLEIDGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADGDKAVAREMA 81 (258)
T ss_pred eEEEEEEECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhcChhhHHHHH
Confidence 368899999999999999986 999999999999999999999999999999999 7999999999875432211 2334
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .++++|++
T Consensus 82 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~l~l 161 (258)
T PRK09076 82 RRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWAKRMIL 161 (258)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 44567788899999999999999999999999999999999999999999999999999999999999999 57999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||++++|+||+++||||++||++++.+ ++.
T Consensus 162 ~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------ 191 (258)
T PRK09076 162 CGERVDAATALRIGLVEEVVEKGEARE--AAL------------------------------------------------ 191 (258)
T ss_pred cCCcCCHHHHHHCCCCceecCchhHHH--HHH------------------------------------------------
Confidence 999999999999999999999887633 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
++++++++.||.+++.+|++++.....++.+.++.|...+..++.++ |++||+++| .+|
T Consensus 192 -----------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~eg~~af-~~k 250 (258)
T PRK09076 192 -----------------ALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFDTE---DQREGVNAF-LEK 250 (258)
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCc---hHHHHHHHH-hcC
Confidence 33789999999999999999998877889999999999999999765 999999999 588
Q ss_pred CCCCCCCC
Q 017189 326 DKNPKWKP 333 (375)
Q Consensus 326 ~r~P~w~~ 333 (375)
|+|+|++
T Consensus 251 -r~p~~~~ 257 (258)
T PRK09076 251 -RAPQWKN 257 (258)
T ss_pred -CCCCCCC
Confidence 8999974
|
|
| >PRK08139 enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-54 Score=405.66 Aligned_cols=261 Identities=26% Similarity=0.397 Sum_probs=229.4
Q ss_pred CCCCC-CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc
Q 017189 1 MASAQ-SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI 79 (375)
Q Consensus 1 M~~~~-~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~ 79 (375)
|.++- +..+.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~ 81 (266)
T PRK08139 2 MAPAAATEAPLLLREDRDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAAR 81 (266)
T ss_pred CCccccccCCceEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhccc
Confidence 44433 34678899999999999999999999999999999999999999999999999999999999999999875432
Q ss_pred chh--hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch
Q 017189 80 NEG--AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG 157 (375)
Q Consensus 80 ~~~--~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g 157 (375)
... ..+...+.+++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++ +++|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG 160 (266)
T PRK08139 82 GLAYFRALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVP 160 (266)
T ss_pred chhHHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhC
Confidence 211 23344556788889999999999999999999999999999999999999999999999999875 568999999
Q ss_pred -HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHH
Q 017189 158 -FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKC 236 (375)
Q Consensus 158 -~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (375)
.++++|++||++++|+||+++||||++||++++.....
T Consensus 161 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~----------------------------------------- 199 (266)
T PRK08139 161 RKQAMEMLLTGEFIDAATAREWGLVNRVVPADALDAAVA----------------------------------------- 199 (266)
T ss_pred HHHHHHHHHcCCccCHHHHHHcCCccEeeChhHHHHHHH-----------------------------------------
Confidence 67999999999999999999999999999887643222
Q ss_pred hCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHh
Q 017189 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFE 316 (375)
Q Consensus 237 f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 316 (375)
+.+++|++.||.+++.+|++++.....++.++++.|...+..++.++ |++|
T Consensus 200 --------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~e 250 (266)
T PRK08139 200 --------------------------RLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMMAE---DAEE 250 (266)
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCc---hHHH
Confidence 23789999999999999999999888899999999999999988755 9999
Q ss_pred hHhhhhccCCCCCCCCCC
Q 017189 317 GCRAILLDKDKNPKWKPS 334 (375)
Q Consensus 317 gv~A~l~ek~r~P~w~~~ 334 (375)
|+++| ++| |+|+|.++
T Consensus 251 g~~af-~~k-r~p~~~~~ 266 (266)
T PRK08139 251 GIDAF-LEK-RPPEWRGR 266 (266)
T ss_pred HHHHH-hcC-CCCCCCCC
Confidence 99999 598 89999753
|
|
| >PRK06142 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-54 Score=408.56 Aligned_cols=254 Identities=24% Similarity=0.331 Sum_probs=226.2
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc--------
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI-------- 79 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-------- 79 (375)
++.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++....
T Consensus 5 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~ 84 (272)
T PRK06142 5 YESFTVELADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGL 84 (272)
T ss_pred cceEEEEecCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhccccccccc
Confidence 457999999999999999999999999999999999999999999999999999999999999999875411
Q ss_pred -chh---hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhc
Q 017189 80 -NEG---AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRL 155 (375)
Q Consensus 80 -~~~---~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl 155 (375)
... ..+...+.+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 164 (272)
T PRK06142 85 ARPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRI 164 (272)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHH
Confidence 001 1223445677888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ch-HHHHHHhhcCCccCHHHHHHcCccceecCC-ccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHH
Q 017189 156 PG-FFGEYVGLTGARLDGAEMRACGLATHFVPS-SRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVI 233 (375)
Q Consensus 156 ~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 233 (375)
+| .++++|++||++++|+||+++||||++||+ +++.. .+.
T Consensus 165 ~G~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~~l~~--~a~------------------------------------ 206 (272)
T PRK06142 165 IGDGHLRELALTGRDIDAAEAEKIGLVNRVYDDADALLA--AAH------------------------------------ 206 (272)
T ss_pred hCHHHHHHHHHhCCCcCHHHHHHcCCccEecCCHHHHHH--HHH------------------------------------
Confidence 99 679999999999999999999999999996 66533 221
Q ss_pred HHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcch
Q 017189 234 DKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKD 313 (375)
Q Consensus 234 ~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d 313 (375)
+.+++|++.||.+++.+|+.+++....++.++++.|...+..++.++ |
T Consensus 207 -----------------------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~~~---d 254 (272)
T PRK06142 207 -----------------------------ATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLPSK---D 254 (272)
T ss_pred -----------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCc---c
Confidence 23789999999999999999998888899999999999999998755 9
Q ss_pred HHhhHhhhhccCCCCCCCCC
Q 017189 314 FFEGCRAILLDKDKNPKWKP 333 (375)
Q Consensus 314 ~~egv~A~l~ek~r~P~w~~ 333 (375)
++||+++| ++| |+|+|++
T Consensus 255 ~~egv~af-~~k-r~p~~~~ 272 (272)
T PRK06142 255 LTEAIAAH-MEK-RPPEFTG 272 (272)
T ss_pred HHHHHHHH-hcC-CCCCCCC
Confidence 99999999 598 8899974
|
|
| >PRK05980 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-54 Score=405.47 Aligned_cols=250 Identities=29% Similarity=0.470 Sum_probs=225.3
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccc---h--hh
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN---E--GA 83 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~---~--~~ 83 (375)
.|.++.+++|++||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..... . ..
T Consensus 4 ~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK05980 4 TVLIEIRDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVALR 83 (260)
T ss_pred eEEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhHH
Confidence 588999999999999999999999999999999999999999999999999999 79999999998754321 1 12
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.+......++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| .++++
T Consensus 84 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 163 (260)
T PRK05980 84 DFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRALE 163 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHHH
Confidence 34445566788899999999999999999999999999999999999999999999999999999999999999 57999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
+++||++++|+||+++||||++||++++.. ++.
T Consensus 164 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~--------------------------------------------- 196 (260)
T PRK05980 164 LLLTGDAFSAERALEIGLVNAVVPHEELLP--AAR--------------------------------------------- 196 (260)
T ss_pred HHHcCCccCHHHHHHcCCCCcccCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999877633 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.++++++.||.+++.+|++++.....++.+++..|...+..++.++ |++||+++|
T Consensus 197 --------------------~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~e~~~af- 252 (260)
T PRK05980 197 --------------------ALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAGSA---DLREGLAAW- 252 (260)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCh---hHHHHHHHH-
Confidence 23688999999999999999999888899999999999999999765 999999999
Q ss_pred ccCCCCCCC
Q 017189 323 LDKDKNPKW 331 (375)
Q Consensus 323 ~ek~r~P~w 331 (375)
++| |+|+|
T Consensus 253 ~~k-r~p~~ 260 (260)
T PRK05980 253 IER-RRPAY 260 (260)
T ss_pred hcc-CCCCC
Confidence 599 88988
|
|
| >KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-55 Score=397.92 Aligned_cols=250 Identities=29% Similarity=0.452 Sum_probs=223.3
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF 90 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 90 (375)
......++|+.||||||+++|+|+..|+.||.+++..++.|+.+.++||||.|++||+|.|++++....... -....+.
T Consensus 39 ~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~~-~~~~~~~ 117 (290)
T KOG1680|consen 39 ELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQD-VSDGIFL 117 (290)
T ss_pred EEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhccccc-ccccccc
Confidence 345557899999999999999999999999999999999999999999999999999999999987643321 0111122
Q ss_pred HHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCc
Q 017189 91 ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGAR 169 (375)
Q Consensus 91 ~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~ 169 (375)
+.+..+.+.+||+||+|||+|+|||++|++.||+|||+++|+|++|+.++|++|.+|++.+|+|.+| .+|+++++||++
T Consensus 118 ~~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Ale~~ltg~~ 197 (290)
T KOG1680|consen 118 RVWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRALEMILTGRR 197 (290)
T ss_pred chhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHHHHHHhcCc
Confidence 3334455899999999999999999999999999999999999999999999999999999999999 679999999999
Q ss_pred cCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHH
Q 017189 170 LDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSAL 249 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L 249 (375)
++|+||+++|||++|||.+++ +.++.
T Consensus 198 ~~AqeA~~~GlVn~Vvp~~~~--l~eAv---------------------------------------------------- 223 (290)
T KOG1680|consen 198 LGAQEAKKIGLVNKVVPSGDA--LGEAV---------------------------------------------------- 223 (290)
T ss_pred ccHHHHHhCCceeEeecchhH--HHHHH----------------------------------------------------
Confidence 999999999999999999886 44544
Q ss_pred hhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCCCC
Q 017189 250 ESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNP 329 (375)
Q Consensus 250 ~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~P 329 (375)
+++++|+++||.+++..|++++.+...++.+++..|...+...+..+ |.+||+.+| .+| |+|
T Consensus 224 -------------~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~~~---d~~Eg~~~f-~~k-r~~ 285 (290)
T KOG1680|consen 224 -------------KLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFATE---DRLEGMTAF-AEK-RKP 285 (290)
T ss_pred -------------HHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhhhH---HHHHHHHHh-ccc-CCc
Confidence 33799999999999999999999999999999999999999999765 999999999 799 899
Q ss_pred CCCC
Q 017189 330 KWKP 333 (375)
Q Consensus 330 ~w~~ 333 (375)
+|+.
T Consensus 286 ~~~k 289 (290)
T KOG1680|consen 286 KFSK 289 (290)
T ss_pred cccc
Confidence 9974
|
|
| >PRK07658 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-54 Score=404.66 Aligned_cols=251 Identities=27% Similarity=0.430 Sum_probs=226.0
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch-h-hHHHH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE-G-AKFFS 87 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~-~~~~~ 87 (375)
.|.++++++|++||||||++ |++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++...... . ..+..
T Consensus 3 ~i~~~~~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 81 (257)
T PRK07658 3 FLSVRVEDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSVTEAEQATELAQ 81 (257)
T ss_pred eEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhccCchhhHHHHHH
Confidence 68899999999999999986 999999999999999999999999999999999999999999987543221 1 23344
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
....++.++..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| .++++|++|
T Consensus 82 ~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l~ 161 (257)
T PRK07658 82 LGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEMMLT 161 (257)
T ss_pred HHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHHHHc
Confidence 5567888899999999999999999999999999999999999999999999999999999999999999 579999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|++++|+||+++||||++||++++.+ ++.
T Consensus 162 g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------- 190 (257)
T PRK07658 162 SEPITGAEALKWGLVNGVFPEETLLD--DAK------------------------------------------------- 190 (257)
T ss_pred CCCcCHHHHHHcCCcCeecChhHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999887633 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+.++++++.||.+++.+|++++.....++.+.++.|...+..++.++ |++||+++| .+|
T Consensus 191 ----------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~egi~af-~~k- 249 (257)
T PRK07658 191 ----------------KLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFTSE---DAKEGVQAF-LEK- 249 (257)
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHH-HcC-
Confidence 33788999999999999999998888899999999999999999755 999999999 488
Q ss_pred CCCCCCC
Q 017189 327 KNPKWKP 333 (375)
Q Consensus 327 r~P~w~~ 333 (375)
|+|+|++
T Consensus 250 r~p~~~~ 256 (257)
T PRK07658 250 RKPSFSG 256 (257)
T ss_pred CCCCCCC
Confidence 8999975
|
|
| >PRK08140 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-54 Score=404.23 Aligned_cols=253 Identities=26% Similarity=0.377 Sum_probs=225.0
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc---hh--
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN---EG-- 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~---~~-- 82 (375)
++.|.++.+++|++||||||++.|++|.+|+.+|.++++.++ |+++++|||||+|++||+|.|++++..... ..
T Consensus 3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 81 (262)
T PRK08140 3 YETILLAIEAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLG 81 (262)
T ss_pred CceEEEEeECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhH
Confidence 567899999999999999999999999999999999999999 999999999999999999999998753221 11
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
..+...+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .+++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~ 161 (262)
T PRK08140 82 ESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARAL 161 (262)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHH
Confidence 112222345677899999999999999999999999999999999999999999999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||++++|+||+++||||+|||++++.. ++.
T Consensus 162 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------------- 195 (262)
T PRK08140 162 GLALLGEKLSAEQAEQWGLIWRVVDDAALAD--EAQ-------------------------------------------- 195 (262)
T ss_pred HHHHcCCCcCHHHHHHcCCccEeeChHHHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999887633 222
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.+++|++.||.+++.+|++++.....++.++++.|...+..++.++ |++||+++|
T Consensus 196 ---------------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~e~~~af 251 (262)
T PRK08140 196 ---------------------QLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGRSA---DYAEGVSAF 251 (262)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCh---hHHHHHHHH
Confidence 33789999999999999999998888899999999999999888765 999999999
Q ss_pred hccCCCCCCCCC
Q 017189 322 LLDKDKNPKWKP 333 (375)
Q Consensus 322 l~ek~r~P~w~~ 333 (375)
++| |+|+|++
T Consensus 252 -~~k-r~p~~~~ 261 (262)
T PRK08140 252 -LEK-RAPRFTG 261 (262)
T ss_pred -hcC-CCCCCCC
Confidence 598 8899975
|
|
| >PRK07799 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-54 Score=404.47 Aligned_cols=254 Identities=28% Similarity=0.416 Sum_probs=223.9
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch-h--hH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE-G--AK 84 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~--~~ 84 (375)
++.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... . ..
T Consensus 4 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (263)
T PRK07799 4 GPHALVEQRGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKPPGDSFKDG 83 (263)
T ss_pred CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhccccchhhhh
Confidence 45789999999999999999999999999999999999999999999999999999999999999988643211 1 11
Q ss_pred -H-HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 85 -F-FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 85 -~-~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
+ ...+.. +.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+++
T Consensus 84 ~~~~~~~~~-~~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 162 (263)
T PRK07799 84 SYDPSRIDA-LLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVAC 162 (263)
T ss_pred hhhhhHHHH-HHHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 1 111222 33468899999999999999999999999999999999999999999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||++++|+||+++||||+|||++++. .+++
T Consensus 163 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~--~~a~-------------------------------------------- 196 (263)
T PRK07799 163 DLLLTGRHITAAEAKEIGLIGHVVPDGQAL--DKAL-------------------------------------------- 196 (263)
T ss_pred HHHHcCCCCCHHHHHHcCCccEecCcchHH--HHHH--------------------------------------------
Confidence 999999999999999999999999998763 2333
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.++++++.||.+++.+|++++.....++.++++.|.+.+..++.++ |++||+++|
T Consensus 197 ---------------------~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---~~~egi~af 252 (263)
T PRK07799 197 ---------------------ELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFLSE---DAKEGPRAF 252 (263)
T ss_pred ---------------------HHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCc---cHHHHHHHH
Confidence 23789999999999999999998888899999999999999988765 999999999
Q ss_pred hccCCCCCCCCCC
Q 017189 322 LLDKDKNPKWKPS 334 (375)
Q Consensus 322 l~ek~r~P~w~~~ 334 (375)
+ +| |+|+|+++
T Consensus 253 ~-~~-r~p~~~~~ 263 (263)
T PRK07799 253 A-EK-RAPNFQGR 263 (263)
T ss_pred H-cc-CCCCCCCC
Confidence 4 88 89999864
|
|
| >PRK06563 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-54 Score=403.53 Aligned_cols=251 Identities=25% Similarity=0.342 Sum_probs=220.9
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch-hhHHHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE-GAKFFSKE 89 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~~~~~~~~ 89 (375)
|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ...+....
T Consensus 1 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 80 (255)
T PRK06563 1 VSRERRGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAGGFPFPEGG 80 (255)
T ss_pred CeEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccchhhhhhhh
Confidence 46788999999999999999999999999999999999999999999999999999999999987543211 11222222
Q ss_pred HHHH-HHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcC
Q 017189 90 FILN-YLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTG 167 (375)
Q Consensus 90 ~~l~-~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG 167 (375)
.+.+ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| ..++++++||
T Consensus 81 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg 160 (255)
T PRK06563 81 IDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRYLLTG 160 (255)
T ss_pred hHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHHHHcC
Confidence 2223 3578899999999999999999999999999999999999999999999999999999999999 5799999999
Q ss_pred CccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILS 247 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~ 247 (375)
+.++|+||+++||||++||++++.+ +++
T Consensus 161 ~~~~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------------------- 188 (255)
T PRK06563 161 DEFDAQEALRLGLVQEVVPPGEQLE--RAI-------------------------------------------------- 188 (255)
T ss_pred CCcCHHHHHHcCCCcEeeCHHHHHH--HHH--------------------------------------------------
Confidence 9999999999999999999887632 333
Q ss_pred HHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCC
Q 017189 248 ALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDK 327 (375)
Q Consensus 248 ~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r 327 (375)
+.++++++.||.+++.+|++++.....++.++++.|...+..++.++ |++||+++| .+| |
T Consensus 189 ---------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~eg~~af-~~k-r 248 (255)
T PRK06563 189 ---------------ELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFTSE---DAKEGVQAF-LER-R 248 (255)
T ss_pred ---------------HHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCc---hHHHHHHHH-hcC-C
Confidence 23688999999999999999998888899999999999999998755 999999999 599 8
Q ss_pred CCCCCC
Q 017189 328 NPKWKP 333 (375)
Q Consensus 328 ~P~w~~ 333 (375)
+|+|++
T Consensus 249 ~p~~~~ 254 (255)
T PRK06563 249 PARFKG 254 (255)
T ss_pred CCCCCC
Confidence 899975
|
|
| >TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-54 Score=402.92 Aligned_cols=250 Identities=28% Similarity=0.397 Sum_probs=222.3
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch--h--hHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE--G--AKFF 86 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~--~~~~ 86 (375)
|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+ +|+|||||.|++||+|.|++++...... . ..+.
T Consensus 1 ~~~e~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T TIGR02280 1 ILSALEAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTPGGAPDLGRTIE 79 (256)
T ss_pred CeEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhccccchhHHHHHH
Confidence 467889999999999999999999999999999999999998 9999999999999999999987642211 1 1122
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+..++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .++++|++
T Consensus 80 ~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~l 159 (256)
T TIGR02280 80 TFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLAM 159 (256)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 22345677899999999999999999999999999999999999999999999999999999999999999 57999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||++++|+||+++||||++||++++.. +++
T Consensus 160 ~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------ 189 (256)
T TIGR02280 160 LGEKLDARTAASWGLIWQVVDDAALMD--EAQ------------------------------------------------ 189 (256)
T ss_pred cCCCCCHHHHHHcCCcceeeChHHHHH--HHH------------------------------------------------
Confidence 999999999999999999999887633 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.++++++.||.+++.+|+.++......+.++++.|.+.+..++.++ |++||+++| .+|
T Consensus 190 -----------------~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~eg~~af-~~k 248 (256)
T TIGR02280 190 -----------------ALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGRSA---DYAEGVTAF-LDK 248 (256)
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCh---hHHHHHHHH-HcC
Confidence 23789999999999999999998888889999999999999998765 999999999 599
Q ss_pred CCCCCCCC
Q 017189 326 DKNPKWKP 333 (375)
Q Consensus 326 ~r~P~w~~ 333 (375)
|+|+|++
T Consensus 249 -r~p~~~~ 255 (256)
T TIGR02280 249 -RNPQFTG 255 (256)
T ss_pred -CCCCCCC
Confidence 8999975
|
This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). |
| >PRK08258 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-54 Score=405.55 Aligned_cols=252 Identities=25% Similarity=0.355 Sum_probs=225.5
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc--h--h-hH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN--E--G-AK 84 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~--~--~-~~ 84 (375)
.+.++.+++|++||||||++.|+|+.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++..... . . ..
T Consensus 18 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~ 97 (277)
T PRK08258 18 HFLWEVDDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLA 97 (277)
T ss_pred ceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999998743211 1 1 23
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCC-CccHHHHHhhcch-HHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFP-DIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p-~~g~~~~l~rl~g-~~a~~ 162 (375)
+.....+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++++| .++++
T Consensus 98 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~ 177 (277)
T PRK08258 98 FTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASE 177 (277)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHH
Confidence 334455788889999999999999999999999999999999999999999999999995 7889999999999 57999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||++++|+||+++||||++||++++.. .+.
T Consensus 178 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~--------------------------------------------- 210 (277)
T PRK08258 178 LLYTGRSMSAEEGERWGFFNRLVEPEELLA--EAQ--------------------------------------------- 210 (277)
T ss_pred HHHcCCCCCHHHHHHcCCCcEecCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999877633 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.+++|++.||.+++.+|++++.....++.+.++.|...+..++.++ |++||+++|
T Consensus 211 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~---d~~eg~~af- 266 (277)
T PRK08258 211 --------------------ALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQTE---DFRRAYEAF- 266 (277)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCc---hHHHHHHHH-
Confidence 23789999999999999999999888899999999999999999765 999999999
Q ss_pred ccCCCCCCCCC
Q 017189 323 LDKDKNPKWKP 333 (375)
Q Consensus 323 ~ek~r~P~w~~ 333 (375)
++| |+|+|++
T Consensus 267 ~ek-r~p~~~~ 276 (277)
T PRK08258 267 VAK-RKPVFEG 276 (277)
T ss_pred hcC-CCCCCCC
Confidence 599 8999975
|
|
| >PRK08138 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-54 Score=402.28 Aligned_cols=253 Identities=28% Similarity=0.418 Sum_probs=226.2
Q ss_pred CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 8 EDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
.+.+.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ...+.
T Consensus 6 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~-~~~~~ 84 (261)
T PRK08138 6 TDVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATAGA-IEMYL 84 (261)
T ss_pred CCCEEEEEccCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhccch-hHHHH
Confidence 34678887 78999999999999999999999999999999999999999999999999999999998764321 12333
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
.....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| ..+++|++
T Consensus 85 ~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l 164 (261)
T PRK08138 85 RHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKAMRMAL 164 (261)
T ss_pred HHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHHHHHHH
Confidence 44566788899999999999999999999999999999999999999999999999999999999999999 57999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.++|+||+++||||++||++++.. ++.
T Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------ 194 (261)
T PRK08138 165 TGCMVPAPEALAIGLVSEVVEDEQTLP--RAL------------------------------------------------ 194 (261)
T ss_pred cCCCCCHHHHHHCCCCcEecCchHHHH--HHH------------------------------------------------
Confidence 999999999999999999999887632 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.++++++.||.+++.+|++++.....++.+++..|.+.+..++.++ |++||+++| .+|
T Consensus 195 -----------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~~~i~af-~~k 253 (261)
T PRK08138 195 -----------------ELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFDSE---DQKEGMDAF-LEK 253 (261)
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHH-hcC
Confidence 22678889999999999999998888889999999999999999765 999999999 599
Q ss_pred CCCCCCCC
Q 017189 326 DKNPKWKP 333 (375)
Q Consensus 326 ~r~P~w~~ 333 (375)
|+|+|++
T Consensus 254 -r~~~~~~ 260 (261)
T PRK08138 254 -RKPAYKG 260 (261)
T ss_pred -CCCCCCC
Confidence 8899975
|
|
| >PLN02600 enoyl-CoA hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-54 Score=401.94 Aligned_cols=247 Identities=26% Similarity=0.432 Sum_probs=222.0
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AKFFSKEFILN 93 (375)
Q Consensus 16 ~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~l~ 93 (375)
.++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....... ..+...+..++
T Consensus 2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PLN02600 2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKMSPSEVQKFVNSLRSTF 81 (251)
T ss_pred CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhccChHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999985 8999999999875422211 33455566778
Q ss_pred HHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCccCH
Q 017189 94 YLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDG 172 (375)
Q Consensus 94 ~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A 172 (375)
.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .++++|++||+.++|
T Consensus 82 ~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~~~~a 161 (251)
T PLN02600 82 SSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGA 161 (251)
T ss_pred HHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCCccCH
Confidence 8899999999999999999999999999999999999999999999999999999999999999 679999999999999
Q ss_pred HHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHHhhc
Q 017189 173 AEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSALESE 252 (375)
Q Consensus 173 ~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~ 252 (375)
+||+++||||++||++++.. +++
T Consensus 162 ~eA~~~Glv~~vv~~~~~~~--~a~------------------------------------------------------- 184 (251)
T PLN02600 162 REAASMGLVNYCVPAGEAYE--KAL------------------------------------------------------- 184 (251)
T ss_pred HHHHHcCCCcEeeChhHHHH--HHH-------------------------------------------------------
Confidence 99999999999999887632 332
Q ss_pred ccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCCCCCCC
Q 017189 253 STNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWK 332 (375)
Q Consensus 253 ~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~P~w~ 332 (375)
+.+++|++.||.+++.+|++++.....++.+.++.|...+..++.++ |++||+++| .+| |+|+|+
T Consensus 185 ----------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~eg~~af-~ek-r~p~~~ 249 (251)
T PLN02600 185 ----------ELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLKTK---DRLEGLAAF-AEK-RKPVYT 249 (251)
T ss_pred ----------HHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHH-hcC-CCCCCC
Confidence 33789999999999999999998888899999999999999999765 999999999 599 889997
Q ss_pred CC
Q 017189 333 PS 334 (375)
Q Consensus 333 ~~ 334 (375)
++
T Consensus 250 ~~ 251 (251)
T PLN02600 250 GK 251 (251)
T ss_pred CC
Confidence 53
|
|
| >PRK07657 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-54 Score=402.73 Aligned_cols=254 Identities=27% Similarity=0.438 Sum_probs=227.7
Q ss_pred CcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hHH
Q 017189 9 DQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AKF 85 (375)
Q Consensus 9 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~~ 85 (375)
+.|.+++ +++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....... ..+
T Consensus 3 ~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 82 (260)
T PRK07657 3 QNISVDYVTPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGMNEEQVRHA 82 (260)
T ss_pred ceEEEEEccCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcCChhhHHHH
Confidence 3688886 799999999999999999999999999999999999999999999999 5999999999875422211 334
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
...+..++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++| ..+++++
T Consensus 83 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~l~ 162 (260)
T PRK07657 83 VSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAKELI 162 (260)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHHHHHHH
Confidence 455677888999999999999999999999999999999999999999999999999999999999999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||++++|+||+++||||++||++++.. .+.
T Consensus 163 l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~----------------------------------------------- 193 (260)
T PRK07657 163 YTGRRISAQEAKEIGLVEFVVPAHLLEE--KAI----------------------------------------------- 193 (260)
T ss_pred HhCCCCCHHHHHHcCCCCeecCHHHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999887633 222
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+.+++++..+|.+++.+|++++.....++.++++.|...+..++.++ |++||+++| .+
T Consensus 194 ------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~e~~~af-~~ 251 (260)
T PRK07657 194 ------------------EIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIPTK---DRLEGLQAF-KE 251 (260)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCH---hHHHHHHHH-hc
Confidence 23788999999999999999999888889999999999999999765 999999999 59
Q ss_pred CCCCCCCCCC
Q 017189 325 KDKNPKWKPS 334 (375)
Q Consensus 325 k~r~P~w~~~ 334 (375)
| |+|+|+++
T Consensus 252 ~-r~~~~~~~ 260 (260)
T PRK07657 252 K-RKPMYKGE 260 (260)
T ss_pred C-CCCCCCCC
Confidence 8 89999753
|
|
| >PRK09245 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-54 Score=403.59 Aligned_cols=252 Identities=25% Similarity=0.401 Sum_probs=224.4
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-----h-h
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSA-QMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN-----E-G 82 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~-~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-----~-~ 82 (375)
.|.++++++|++||||||++.|++|. +|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++..... . .
T Consensus 4 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (266)
T PRK09245 4 FLLVERDGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSPAD 83 (266)
T ss_pred ceEEEEECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccchh
Confidence 48999999999999999999999995 999999999999999999999999999999999999998754211 0 0
Q ss_pred --hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HH
Q 017189 83 --AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FF 159 (375)
Q Consensus 83 --~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~ 159 (375)
..+...+..++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| .+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~ 163 (266)
T PRK09245 84 IRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGMAR 163 (266)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhHHH
Confidence 122233456778899999999999999999999999999999999999999999999999999999999999999 57
Q ss_pred HHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCc
Q 017189 160 GEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSR 239 (375)
Q Consensus 160 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~ 239 (375)
+++|++||++++|+||+++||||++||++++.. .+.
T Consensus 164 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------ 199 (266)
T PRK09245 164 AAEMAFTGDAIDAATALEWGLVSRVVPADQLLP--AAR------------------------------------------ 199 (266)
T ss_pred HHHHHHcCCCcCHHHHHHcCCcceecCHHHHHH--HHH------------------------------------------
Confidence 999999999999999999999999999887643 222
Q ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 240 RTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 240 ~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+.+++|++.||.+++.+|++++.....++.+.++.|...+..++.++ |++||++
T Consensus 200 -----------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~eg~~ 253 (266)
T PRK09245 200 -----------------------ALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAHHTA---DHREAVD 253 (266)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCH---hHHHHHH
Confidence 23789999999999999999998888889999999999998888654 9999999
Q ss_pred hhhccCCCCCCCCC
Q 017189 320 AILLDKDKNPKWKP 333 (375)
Q Consensus 320 A~l~ek~r~P~w~~ 333 (375)
+| ++| |.|.|++
T Consensus 254 af-~~k-r~p~~~~ 265 (266)
T PRK09245 254 AF-LEK-RPPVFTG 265 (266)
T ss_pred HH-HcC-CCCCCCC
Confidence 99 599 8999975
|
|
| >PRK06494 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-53 Score=401.26 Aligned_cols=253 Identities=29% Similarity=0.388 Sum_probs=220.4
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchhhHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKF 85 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~ 85 (375)
+++.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++....... ..
T Consensus 2 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~-~~ 80 (259)
T PRK06494 2 ALPFSTVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGGKRG-WP 80 (259)
T ss_pred CCceeEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcCcch-hh
Confidence 456799999999999999999999999999999999999999999999999999999 7999999999875432211 11
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
...+..+ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| ..+++|+
T Consensus 81 ~~~~~~~-~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~ll 159 (259)
T PRK06494 81 ESGFGGL-TSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRAMGMI 159 (259)
T ss_pred hHHHHHH-HHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHHHHHH
Confidence 1122223 3346899999999999999999999999999999999999999999999999999999999999 5799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||++||++++.. .+.
T Consensus 160 l~g~~~~a~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------------- 190 (259)
T PRK06494 160 LTGRRVTAREGLELGFVNEVVPAGELLA--AAE----------------------------------------------- 190 (259)
T ss_pred HcCCcCCHHHHHHcCCCcEecCHhHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999877633 222
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHH--HHHHHHHhhCCCcchHHhhHhhhh
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIRE--YRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e--~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.++++++.||.+++.+|+.++.....++.++++.| ...+..++.++ |++||+++|
T Consensus 191 ------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~---d~~eg~~af- 248 (259)
T PRK06494 191 ------------------RWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARRASQ---DYIEGPKAF- 248 (259)
T ss_pred ------------------HHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCc---cHHHHHHHH-
Confidence 237899999999999999999988888899999999 45677777654 999999999
Q ss_pred ccCCCCCCCCC
Q 017189 323 LDKDKNPKWKP 333 (375)
Q Consensus 323 ~ek~r~P~w~~ 333 (375)
++| |+|+|++
T Consensus 249 ~~k-r~p~~~~ 258 (259)
T PRK06494 249 AEK-RPPRWKG 258 (259)
T ss_pred Hcc-CCCCCCC
Confidence 588 8899975
|
|
| >PRK05995 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=402.22 Aligned_cols=255 Identities=25% Similarity=0.396 Sum_probs=223.7
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-h-h--
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN-E-G-- 82 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~-~-- 82 (375)
.++.|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||+|++||+|+|++++..... . .
T Consensus 2 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (262)
T PRK05995 2 MYETLEIEQRGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYSDDEN 81 (262)
T ss_pred CCceEEEEeeCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccCchhh
Confidence 35679999999999999999999999999999999999999999999999999999999999999998753211 1 1
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
......+.+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ +++++| .+++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~ 160 (262)
T PRK05995 82 RADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAAR 160 (262)
T ss_pred hhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHH
Confidence 11233456788889999999999999999999999999999999999999999999999999988764 788899 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||++++|+||+++||||+|||++++.. ++.
T Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------------- 194 (262)
T PRK05995 161 RYFLTAERFDAAEALRLGLVHEVVPAEALDA--KVD-------------------------------------------- 194 (262)
T ss_pred HHHHcCCccCHHHHHHcCCCCeecCHHHHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999877643 221
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHH-HHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQC-LIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~-l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
++++++++.||.+++.+|+.++.....++.+. ++.|...+..++.++ |++||+++
T Consensus 195 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~e~~~a 250 (262)
T PRK05995 195 ---------------------ELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRATE---EAREGVAA 250 (262)
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 23789999999999999999998877888888 888888888888654 99999999
Q ss_pred hhccCCCCCCCCCC
Q 017189 321 ILLDKDKNPKWKPS 334 (375)
Q Consensus 321 ~l~ek~r~P~w~~~ 334 (375)
| .+| |+|+|+++
T Consensus 251 f-~~k-r~p~~~~~ 262 (262)
T PRK05995 251 F-LEK-RKPAWRGR 262 (262)
T ss_pred H-hcC-CCCCCCCC
Confidence 9 599 89999864
|
|
| >PRK08252 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-53 Score=399.64 Aligned_cols=249 Identities=25% Similarity=0.360 Sum_probs=219.9
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKE 89 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 89 (375)
.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ......+
T Consensus 4 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~-~~~~~~~ 82 (254)
T PRK08252 4 EVLVERRGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARGERP-SIPGRGF 82 (254)
T ss_pred eEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcccch-hhhHHHH
Confidence 588999999999999999999999999999999999999999999999999999999999999988643211 1111112
Q ss_pred HHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCC
Q 017189 90 FILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGA 168 (375)
Q Consensus 90 ~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~ 168 (375)
..+. ...+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .++++|++||+
T Consensus 83 ~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~l~g~ 160 (254)
T PRK08252 83 GGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGD 160 (254)
T ss_pred HHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHHHHHHcCC
Confidence 2222 24699999999999999999999999999999999999999999999999999999999999 67999999999
Q ss_pred ccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHH
Q 017189 169 RLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSA 248 (375)
Q Consensus 169 ~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~ 248 (375)
+++|+||+++||||+|||++++.. ++.
T Consensus 161 ~~~a~eA~~~Glv~~vv~~~~l~~--~a~--------------------------------------------------- 187 (254)
T PRK08252 161 MLTAERAHELGLVNRLTEPGQALD--AAL--------------------------------------------------- 187 (254)
T ss_pred ccCHHHHHHcCCcceecCcchHHH--HHH---------------------------------------------------
Confidence 999999999999999999887633 222
Q ss_pred HhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCCC
Q 017189 249 LESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKN 328 (375)
Q Consensus 249 L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~ 328 (375)
+.++++++.||.+++.+|++++.....++.++++.|...+..++.++ |++||+++| ++| |+
T Consensus 188 --------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---~~~eg~~af-~~k-r~ 248 (254)
T PRK08252 188 --------------ELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFTSA---DAKEGATAF-AEK-RA 248 (254)
T ss_pred --------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCc---hHHHHHHHH-hcC-CC
Confidence 33789999999999999999998888889999999999999988765 999999999 588 88
Q ss_pred CCCCC
Q 017189 329 PKWKP 333 (375)
Q Consensus 329 P~w~~ 333 (375)
|+|++
T Consensus 249 p~~~~ 253 (254)
T PRK08252 249 PVWTG 253 (254)
T ss_pred CCCCC
Confidence 99975
|
|
| >PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-53 Score=404.91 Aligned_cols=252 Identities=23% Similarity=0.334 Sum_probs=221.8
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-----h---
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN-----E--- 81 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-----~--- 81 (375)
.+..+.+++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 9 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~ 88 (275)
T PLN02664 9 IIQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGR 88 (275)
T ss_pred EEEecCCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchh
Confidence 34455689999999999999999999999999999999999999999999999999999999998754211 0
Q ss_pred ---h-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch
Q 017189 82 ---G-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG 157 (375)
Q Consensus 82 ---~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g 157 (375)
. ..+...+.+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 168 (275)
T PLN02664 89 SGERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVG 168 (275)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhC
Confidence 0 122334456778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred -HHHHHHhhcCCccCHHHHHHcCccceecCC-ccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHH
Q 017189 158 -FFGEYVGLTGARLDGAEMRACGLATHFVPS-SRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235 (375)
Q Consensus 158 -~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (375)
.+++++++||+.++|+||+++||||++||+ +++.. +.
T Consensus 169 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~---~~-------------------------------------- 207 (275)
T PLN02664 169 YGNAMELALTGRRFSGSEAKELGLVSRVFGSKEDLDE---GV-------------------------------------- 207 (275)
T ss_pred HHHHHHHHHhCCCCCHHHHHHcCCCceeeCChhHHHH---HH--------------------------------------
Confidence 679999999999999999999999999995 55532 11
Q ss_pred HhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHH
Q 017189 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFF 315 (375)
Q Consensus 236 ~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~ 315 (375)
.+.+++|++.||.+++.+|++++.....++.++++.|...+..++.++ |++
T Consensus 208 --------------------------~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~ 258 (275)
T PLN02664 208 --------------------------RLIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAMLVSD---DLN 258 (275)
T ss_pred --------------------------HHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccCh---hHH
Confidence 133789999999999999999998888899999999999888888655 999
Q ss_pred hhHhhhhccCCCCCCCCC
Q 017189 316 EGCRAILLDKDKNPKWKP 333 (375)
Q Consensus 316 egv~A~l~ek~r~P~w~~ 333 (375)
||+++| ++| |+|.|++
T Consensus 259 eg~~af-~ek-r~p~~~~ 274 (275)
T PLN02664 259 EAVSAQ-IQK-RKPVFAK 274 (275)
T ss_pred HHHHHH-hcc-CCCCCCC
Confidence 999999 599 8999975
|
|
| >PRK05981 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-53 Score=401.55 Aligned_cols=255 Identities=26% Similarity=0.362 Sum_probs=227.4
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCC-CceEEEEeeCCCCccccCCchhHhhccc-----
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDS-NVKLLILKGKGRAFCAGGDVAAVVRGIN----- 80 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~-~vr~vVltg~g~~F~aG~Dl~~~~~~~~----- 80 (375)
+|+.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+ ++|+|||||.|++||+|+|++++.....
T Consensus 2 ~~~~v~~~~~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 81 (266)
T PRK05981 2 QFKKVTLDFDGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSG 81 (266)
T ss_pred CcceEEEEeECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhccccccccc
Confidence 4678999999999999999999999999999999999999999876 4999999999999999999998754321
Q ss_pred -h-hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-
Q 017189 81 -E-GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG- 157 (375)
Q Consensus 81 -~-~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g- 157 (375)
. ...+...+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~ 161 (266)
T PRK05981 82 GDAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGK 161 (266)
T ss_pred chhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHH
Confidence 1 1223344567888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHh
Q 017189 158 FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCF 237 (375)
Q Consensus 158 ~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f 237 (375)
..+++|++||++++|+||+++|||++++|++++.. +++
T Consensus 162 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~--~a~---------------------------------------- 199 (266)
T PRK05981 162 ARAMELSLLGEKLPAETALQWGLVNRVVDDAELMA--EAM---------------------------------------- 199 (266)
T ss_pred HHHHHHHHhCCCcCHHHHHHcCCceEeeCHhHHHH--HHH----------------------------------------
Confidence 56999999999999999999999999999887632 222
Q ss_pred CcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhh
Q 017189 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEG 317 (375)
Q Consensus 238 ~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 317 (375)
+.+++++..||.+++.+|++++.....++.+.++.|...+..++.++ |++||
T Consensus 200 -------------------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~s~---d~~e~ 251 (266)
T PRK05981 200 -------------------------KLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGKTE---DFKEG 251 (266)
T ss_pred -------------------------HHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCh---hHHHH
Confidence 23688999999999999999998878889999999999999888755 99999
Q ss_pred HhhhhccCCCCCCCCC
Q 017189 318 CRAILLDKDKNPKWKP 333 (375)
Q Consensus 318 v~A~l~ek~r~P~w~~ 333 (375)
+++| .+| |+|+|++
T Consensus 252 ~~af-~~k-r~~~~~~ 265 (266)
T PRK05981 252 VGAF-LQK-RPAQFKG 265 (266)
T ss_pred HHHH-hcC-CCCCCCC
Confidence 9999 599 8899975
|
|
| >PRK07659 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-53 Score=398.86 Aligned_cols=253 Identities=25% Similarity=0.362 Sum_probs=226.5
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch-h-hH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE-G-AK 84 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~-~~ 84 (375)
+++.|.++.+++|++||||||++.|++|.+|+.+|.++++.+ .|+++|+|||+|.|++||+|+|++++...... . ..
T Consensus 4 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (260)
T PRK07659 4 KMESVVVKYEGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSSNDESKFDG 82 (260)
T ss_pred CCceEEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhccCchhHHH
Confidence 346799999999999999999999999999999999999999 58899999999999999999999998643221 1 34
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+...+.+++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| ..+++|
T Consensus 83 ~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~l 162 (260)
T PRK07659 83 VMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQI 162 (260)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHHH
Confidence 4556677888899999999999999999999999999999999999999999999999999999999999999 579999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
++||+.++|+||+++||||++| ++++.. .+.
T Consensus 163 ~ltg~~~~a~eA~~~Glv~~vv-~~~~~~--~a~---------------------------------------------- 193 (260)
T PRK07659 163 IWEGKKLSATEALDLGLIDEVI-GGDFQT--AAK---------------------------------------------- 193 (260)
T ss_pred HHhCCccCHHHHHHcCChHHHh-hhHHHH--HHH----------------------------------------------
Confidence 9999999999999999999999 666533 222
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhc
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILL 323 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ 323 (375)
+.+++|++.||.+++.+|+.++......+.+.++.|...+..++.++ |++||+++| +
T Consensus 194 -------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---~~~egi~af-~ 250 (260)
T PRK07659 194 -------------------QKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQTA---DHKEGIRAF-L 250 (260)
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCH---hHHHHHHHH-h
Confidence 23789999999999999999998888899999999999999998755 999999999 5
Q ss_pred cCCCCCCCCC
Q 017189 324 DKDKNPKWKP 333 (375)
Q Consensus 324 ek~r~P~w~~ 333 (375)
+| |+|+|++
T Consensus 251 ~k-r~p~~~~ 259 (260)
T PRK07659 251 EK-RLPVFKG 259 (260)
T ss_pred cC-CCCCCCC
Confidence 99 8899975
|
|
| >PRK07468 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-53 Score=398.10 Aligned_cols=253 Identities=26% Similarity=0.396 Sum_probs=221.5
Q ss_pred CCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-h-h--
Q 017189 8 EDQVLEEET-SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN-E-G-- 82 (375)
Q Consensus 8 ~~~v~~~~~-~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~-~-- 82 (375)
++.|.++++ ++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|.|++++..... . .
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (262)
T PRK07468 3 FETIRIAVDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTADRATR 82 (262)
T ss_pred cceEEEEEcCCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhcccchhhH
Confidence 456888886 6899999999999999999999999999999999999999999999999999999998753211 1 1
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
......+..++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++ +| .+++
T Consensus 83 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~~-vG~~~a~ 161 (262)
T PRK07468 83 IEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVAR-MGEANAR 161 (262)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHhh-ccHHHHH
Confidence 122344566788899999999999999999999999999999999999999999999999999999986655 78 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||++++|+||+++||||+++|++++.....
T Consensus 162 ~lll~g~~~~a~eA~~~Glv~~v~~~~~l~~~~~---------------------------------------------- 195 (262)
T PRK07468 162 RVFMSARLFDAEEAVRLGLLSRVVPAERLDAAVE---------------------------------------------- 195 (262)
T ss_pred HHHHhCCccCHHHHHHcCCcceecCHHHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999877633211
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.++++++.||.+++.+|++++......+.+.++.|...+..++.++ |++||+++|
T Consensus 196 ---------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~---d~~e~~~af 251 (262)
T PRK07468 196 ---------------------AEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWETE---EAREGIAAF 251 (262)
T ss_pred ---------------------HHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhcCH---HHHHHHHHH
Confidence 23689999999999999999988766678999999999999999765 999999999
Q ss_pred hccCCCCCCCCC
Q 017189 322 LLDKDKNPKWKP 333 (375)
Q Consensus 322 l~ek~r~P~w~~ 333 (375)
++| |+|+|++
T Consensus 252 -~~k-r~~~~~~ 261 (262)
T PRK07468 252 -FDK-RAPAWRG 261 (262)
T ss_pred -HcC-CCCCCCC
Confidence 599 8899974
|
|
| >PRK07511 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-53 Score=397.30 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=227.0
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc---h-hhHH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN---E-GAKF 85 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~---~-~~~~ 85 (375)
.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|++||+|.|++++..... . ...+
T Consensus 4 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~~ 83 (260)
T PRK07511 4 ELLSRREGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRAKPPSVQAAS 83 (260)
T ss_pred eeEEEeECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhcccccchhHHHH
Confidence 48889999999999999999999999999999999999999999999999999999999999998764211 1 1334
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
...+++++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| ..+++|+
T Consensus 84 ~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~l~ 163 (260)
T PRK07511 84 IDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATELL 163 (260)
T ss_pred HHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHHHH
Confidence 556677888999999999999999999999999999999999999999999999999999999999999999 5799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||++++|+||+++||||++||++++. .+++
T Consensus 164 ltg~~~~a~eA~~~Glv~~vv~~~~~~--~~a~----------------------------------------------- 194 (260)
T PRK07511 164 LEGKPISAERLHALGVVNRLAEPGQAL--AEAL----------------------------------------------- 194 (260)
T ss_pred HhCCCCCHHHHHHcCCccEeeCchHHH--HHHH-----------------------------------------------
Confidence 999999999999999999999987763 2332
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+.++++++.||.+++.+|+.++.....++.++++.|...+..++.++ |+++|+++| ++
T Consensus 195 ------------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~~~i~~f-~~ 252 (260)
T PRK07511 195 ------------------ALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLHHA---DALEGIAAF-LE 252 (260)
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc---hHHHHHHHH-hc
Confidence 22688999999999999999999888899999999999999999765 999999999 58
Q ss_pred CCCCCCCC
Q 017189 325 KDKNPKWK 332 (375)
Q Consensus 325 k~r~P~w~ 332 (375)
| |+|.|+
T Consensus 253 ~-r~~~~~ 259 (260)
T PRK07511 253 K-RAPDYK 259 (260)
T ss_pred c-CCCCCC
Confidence 8 789995
|
|
| >PRK06688 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-53 Score=397.48 Aligned_cols=254 Identities=30% Similarity=0.434 Sum_probs=228.9
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFS 87 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 87 (375)
.+.|.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.........+..
T Consensus 4 ~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (259)
T PRK06688 4 VTDLLVELEDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAPPKPPDELA 83 (259)
T ss_pred CCceEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccCcchHHHHH
Confidence 34689999999999999999999999999999999999999999999999999999999999999988653322133455
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+.+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| ..++++++|
T Consensus 84 ~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~l~ 163 (259)
T PRK06688 84 PVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAEMLLL 163 (259)
T ss_pred HHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHHHHHHh
Confidence 6677888999999999999999999999999999999999999999999999999999999999999999 579999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|++++|+||+++||||+++|++++.. .+.
T Consensus 164 g~~~~a~eA~~~Glv~~v~~~~~l~~--~a~------------------------------------------------- 192 (259)
T PRK06688 164 GEPLSAEEALRIGLVNRVVPAAELDA--EAD------------------------------------------------- 192 (259)
T ss_pred CCccCHHHHHHcCCcceecCHHHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999877632 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+.+++|++.||.+++.+|+.++.....+++++++.|.+.+..++.++ |+++|+++| .+|
T Consensus 193 ----------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~~~~~af-~~~- 251 (259)
T PRK06688 193 ----------------AQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLRTP---DFREGATAF-IEK- 251 (259)
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHH-HcC-
Confidence 23688999999999999999999888899999999999999999765 999999999 488
Q ss_pred CCCCCCC
Q 017189 327 KNPKWKP 333 (375)
Q Consensus 327 r~P~w~~ 333 (375)
|+|+|++
T Consensus 252 ~~p~~~~ 258 (259)
T PRK06688 252 RKPDFTG 258 (259)
T ss_pred CCCCCCC
Confidence 8899974
|
|
| >TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-53 Score=396.94 Aligned_cols=252 Identities=21% Similarity=0.306 Sum_probs=214.0
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchhhHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
|+.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.........+.
T Consensus 1 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~ 80 (256)
T TIGR03210 1 YEDILYEKRNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGGYDGRGTIG 80 (256)
T ss_pred CCceEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhccccchhHHH
Confidence 45689999999999999999999999999999999999999999999999999999 79999999998743211111222
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++| .+++++++
T Consensus 81 ~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~~lll 160 (256)
T TIGR03210 81 LPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAREIWY 160 (256)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHHHHHH
Confidence 33456788899999999999999999999999999999999999999999999999988888999999999 57999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||++++|+||+++||||++||++++.. ++.
T Consensus 161 ~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------ 190 (256)
T TIGR03210 161 LCRRYTAQEALAMGLVNAVVPHDQLDA--EVQ------------------------------------------------ 190 (256)
T ss_pred hCCCcCHHHHHHcCCceeeeCHHHHHH--HHH------------------------------------------------
Confidence 999999999999999999999877643 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCH-HHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGV-GQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l-~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+.+++|++.||.+++.+|++++....... .+. .|...+..++.+ +|++||+++| .+
T Consensus 191 -----------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~--~~~~~~~~~~~~---~d~~e~~~af-~~ 247 (256)
T TIGR03210 191 -----------------KWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAG--MGMYALKLYYDT---AESREGVKAF-QE 247 (256)
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHhhcccchHHH--HHHHHHHHHccC---hhHHHHHHHH-hc
Confidence 33789999999999999999987643321 111 244556666654 5999999999 59
Q ss_pred CCCCCCCCC
Q 017189 325 KDKNPKWKP 333 (375)
Q Consensus 325 k~r~P~w~~ 333 (375)
| |+|+|++
T Consensus 248 k-r~p~~~~ 255 (256)
T TIGR03210 248 K-RKPEFRK 255 (256)
T ss_pred c-CCCCCCC
Confidence 9 8899974
|
Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. |
| >PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-53 Score=399.19 Aligned_cols=254 Identities=25% Similarity=0.392 Sum_probs=219.6
Q ss_pred CCCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-h---
Q 017189 7 QEDQVLEEET-SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN-E--- 81 (375)
Q Consensus 7 ~~~~v~~~~~-~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~--- 81 (375)
+|+.+.++++ ++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 3 ~~~~l~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 82 (265)
T PRK05674 3 DFQTIELIRDPRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADLDYNT 82 (265)
T ss_pred CcceEEEEEcCCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcccccchh
Confidence 3677999985 7899999999999999999999999999999999999999999999999999999998753211 1
Q ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 82 GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 82 ~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
.......+.+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ ++++++| .++
T Consensus 83 ~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~-~l~~~vG~~~a 161 (265)
T PRK05674 83 NLDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISP-FVVKAIGERAA 161 (265)
T ss_pred hhHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHH-HHHHHhCHHHH
Confidence 11223345677888999999999999999999999999999999999999999999999999988766 4888889 679
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
+++++||+.|+|+||+++|||++|||++++.. ++.
T Consensus 162 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------- 196 (265)
T PRK05674 162 RRYALTAERFDGRRARELGLLAESYPAAELEA--QVE------------------------------------------- 196 (265)
T ss_pred HHHHHhCcccCHHHHHHCCCcceecCHHHHHH--HHH-------------------------------------------
Confidence 99999999999999999999999999877633 222
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHH-HHHHHHHHhhCCCcchHHhhHh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIR-EYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~-e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+.+++|++.||.+++.+|+.++.....++.+++.. +...+..++.+ +|++||++
T Consensus 197 ----------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~s---~d~~e~~~ 251 (265)
T PRK05674 197 ----------------------AWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIRVS---AEGQEGLR 251 (265)
T ss_pred ----------------------HHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence 23789999999999999999999888888888765 44566667754 59999999
Q ss_pred hhhccCCCCCCCCC
Q 017189 320 AILLDKDKNPKWKP 333 (375)
Q Consensus 320 A~l~ek~r~P~w~~ 333 (375)
+| ++| |+|+|+.
T Consensus 252 af-~~k-r~p~~~~ 263 (265)
T PRK05674 252 AF-LEK-RTPAWQT 263 (265)
T ss_pred HH-Hcc-CCCCCCC
Confidence 99 598 8899974
|
|
| >PRK03580 carnitinyl-CoA dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-53 Score=396.22 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=220.1
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchhhHHHHH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSK 88 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~~~~ 88 (375)
.|.++++++|++||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.........+...
T Consensus 4 ~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~~ 82 (261)
T PRK03580 4 SLHTTRNGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPG 82 (261)
T ss_pred eEEEEEECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccCcchhhhhhh
Confidence 5889999999999999996 5999999999999999999999999999999999 7999999999875432211122222
Q ss_pred HHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcC
Q 017189 89 EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTG 167 (375)
Q Consensus 89 ~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG 167 (375)
....+.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| ..++++++||
T Consensus 83 ~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~~l~l~g 162 (261)
T PRK03580 83 GFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTG 162 (261)
T ss_pred hhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHHhC
Confidence 344567889999999999999999999999999999999999999999999999999999999999999 5799999999
Q ss_pred CccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILS 247 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~ 247 (375)
++++|+||+++|||+++||++++.+ ++.
T Consensus 163 ~~~~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------------------- 190 (261)
T PRK03580 163 RRMDAEEALRWGIVNRVVPQAELMD--RAR-------------------------------------------------- 190 (261)
T ss_pred CccCHHHHHHcCCCcEecCHhHHHH--HHH--------------------------------------------------
Confidence 9999999999999999999887743 222
Q ss_pred HHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHH----HHHHHhhCCCcchHHhhHhhhhc
Q 017189 248 ALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYR----MVCHVMMGEVSKDFFEGCRAILL 323 (375)
Q Consensus 248 ~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~----~~~~~~~~~~s~d~~egv~A~l~ 323 (375)
+.+++|++.||.+++.+|++++.....++.++++.|.. .+..++.++ |++||+++| +
T Consensus 191 ---------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~---d~~e~~~af-~ 251 (261)
T PRK03580 191 ---------------ELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVLHSE---DALEGPRAF-A 251 (261)
T ss_pred ---------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHhcCc---cHHHHHHHH-h
Confidence 22689999999999999999998888889999998864 666777655 999999999 5
Q ss_pred cCCCCCCCCC
Q 017189 324 DKDKNPKWKP 333 (375)
Q Consensus 324 ek~r~P~w~~ 333 (375)
+| |+|+|++
T Consensus 252 ek-r~~~~~~ 260 (261)
T PRK03580 252 EK-RDPVWKG 260 (261)
T ss_pred cC-CCCCCCC
Confidence 99 8899975
|
|
| >TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-53 Score=396.64 Aligned_cols=252 Identities=21% Similarity=0.320 Sum_probs=216.4
Q ss_pred CcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccc-hh-hH
Q 017189 9 DQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN-EG-AK 84 (375)
Q Consensus 9 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~-~~-~~ 84 (375)
..|.+++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..... .. ..
T Consensus 2 ~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~ 81 (259)
T TIGR01929 2 TDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYIDDSGV 81 (259)
T ss_pred ceEEEEEcCCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhccccchhhH
Confidence 4578888 899999999999999999999999999999999999999999999999 89999999997643211 11 11
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
.......++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|
T Consensus 82 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~~l 161 (259)
T TIGR01929 82 HRLNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAREI 161 (259)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHHHH
Confidence 1112345777889999999999999999999999999999999999999999999999999999999999999 679999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
++||++++|+||+++||||+|||++++.. .+.
T Consensus 162 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~---------------------------------------------- 193 (259)
T TIGR01929 162 WFLCRQYDAEQALDMGLVNTVVPLADLEK--ETV---------------------------------------------- 193 (259)
T ss_pred HHhCCccCHHHHHHcCCcccccCHHHHHH--HHH----------------------------------------------
Confidence 99999999999999999999999877633 222
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhc
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILL 323 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ 323 (375)
+.+++|++.||.+++.+|++++..... ....+..|...+..++.++ |++||+++| .
T Consensus 194 -------------------~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~~~---d~~egi~af-~ 249 (259)
T TIGR01929 194 -------------------RWCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFYMTE---EGQEGRNAF-L 249 (259)
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHhcCc---cHHHHHHHH-h
Confidence 237899999999999999999876443 4555566777777777655 999999999 5
Q ss_pred cCCCCCCCCC
Q 017189 324 DKDKNPKWKP 333 (375)
Q Consensus 324 ek~r~P~w~~ 333 (375)
+| |+|+|+.
T Consensus 250 ~k-r~p~~~~ 258 (259)
T TIGR01929 250 EK-RQPDFSK 258 (259)
T ss_pred cc-CCCCCCC
Confidence 99 8999974
|
This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches. |
| >PRK06210 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-53 Score=399.05 Aligned_cols=256 Identities=27% Similarity=0.414 Sum_probs=225.6
Q ss_pred CCCCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--
Q 017189 6 SQEDQVLEEETS-FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-- 82 (375)
Q Consensus 6 ~~~~~v~~~~~~-~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 82 (375)
++++.|.+++++ +|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 2 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~ 81 (272)
T PRK06210 2 MAYDAVLYEVADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGR 81 (272)
T ss_pred CCcceEEEEECCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCccccc
Confidence 567789999998 99999999999999999999999999999999999999999999999999999999875422110
Q ss_pred -----hHHH----HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHh
Q 017189 83 -----AKFF----SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLS 153 (375)
Q Consensus 83 -----~~~~----~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~ 153 (375)
..+. ..+.+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 161 (272)
T PRK06210 82 RDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILP 161 (272)
T ss_pred ccccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhH
Confidence 0111 1224456788999999999999999999999999999999999999999999999999999999999
Q ss_pred hcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHH
Q 017189 154 RLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDV 232 (375)
Q Consensus 154 rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (375)
|++| .++++|++||+.++|++|+++||||++||++++.. ++.
T Consensus 162 ~~ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~----------------------------------- 204 (272)
T PRK06210 162 RLVGHANALDLLLSARTFYAEEALRLGLVNRVVPPDELME--RTL----------------------------------- 204 (272)
T ss_pred hhhCHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHH--HHH-----------------------------------
Confidence 9999 56999999999999999999999999999877632 222
Q ss_pred HHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhc-CCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCc
Q 017189 233 IDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKA-SPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVS 311 (375)
Q Consensus 233 i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~-sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s 311 (375)
+.+++|++. +|.++..+|+.+++....++.++++.|...+..++.++
T Consensus 205 ------------------------------~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~-- 252 (272)
T PRK06210 205 ------------------------------AYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQRP-- 252 (272)
T ss_pred ------------------------------HHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhcCc--
Confidence 236888875 99999999999999888899999999999999888755
Q ss_pred chHHhhHhhhhccCCCCCCCCC
Q 017189 312 KDFFEGCRAILLDKDKNPKWKP 333 (375)
Q Consensus 312 ~d~~egv~A~l~ek~r~P~w~~ 333 (375)
|++||+++| ++| |+|.|.+
T Consensus 253 -~~~egi~af-~~k-r~p~~~~ 271 (272)
T PRK06210 253 -DFIEGVASF-LEK-RPPRFPG 271 (272)
T ss_pred -cHHHHHHHH-hcc-CCCCCCC
Confidence 999999999 599 8899974
|
|
| >PRK07327 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-53 Score=397.74 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=216.6
Q ss_pred CCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch---
Q 017189 6 SQEDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE--- 81 (375)
Q Consensus 6 ~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--- 81 (375)
.+++.|.+++ .++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++......
T Consensus 8 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 87 (268)
T PRK07327 8 ADYPALRFDRPPPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEMADDFEV 87 (268)
T ss_pred CCCCeEEEEecCCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhccCcHHH
Confidence 4578899998 589999999999999999999999999999999999999999999999999999999987543211
Q ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 82 GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 82 ~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
...++.....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .++
T Consensus 88 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 167 (268)
T PRK07327 88 RARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAKA 167 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHHH
Confidence 1233444567788899999999999999999999999999999999999999999999999999999999999999 679
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
+++++||++++|+||+++|||++++|++++.+ +++
T Consensus 168 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------- 202 (268)
T PRK07327 168 KYYLLLCEPVSGEEAERIGLVSLAVDDDELLP--KAL------------------------------------------- 202 (268)
T ss_pred HHHHHcCCccCHHHHHHcCCcceecCHHHHHH--HHH-------------------------------------------
Confidence 99999999999999999999999999887733 332
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhhCCCcchHHhh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL---QGVGQCLIREYRMVCHVMMGEVSKDFFEG 317 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~---~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 317 (375)
+.+++|++.||.+++.+|++++.... ..+++.+..|. ..+. ++|++||
T Consensus 203 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~----~~~~---~~d~~eg 253 (268)
T PRK07327 203 ----------------------EVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEF----MGFS---GPDVREG 253 (268)
T ss_pred ----------------------HHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----HHcc---ChhHHHH
Confidence 23789999999999999999986532 23555544442 3454 4599999
Q ss_pred HhhhhccCCCCCCCCC
Q 017189 318 CRAILLDKDKNPKWKP 333 (375)
Q Consensus 318 v~A~l~ek~r~P~w~~ 333 (375)
+++| ++| |+|+|++
T Consensus 254 ~~af-~ek-r~p~~~~ 267 (268)
T PRK07327 254 LASL-REK-RAPDFPG 267 (268)
T ss_pred HHHH-Hhc-CCCCCCC
Confidence 9999 599 8999975
|
|
| >PRK06495 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-52 Score=394.04 Aligned_cols=251 Identities=26% Similarity=0.406 Sum_probs=222.3
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-h-h-h
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN-E-G-A 83 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~-~-~ 83 (375)
.|+.|.++++++|++||||||+ .|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... . . .
T Consensus 2 ~~~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~ 80 (257)
T PRK06495 2 MMSQLKLEVSDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVIKGPGDLR 80 (257)
T ss_pred CcceEEEEeeCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhccCCchhHH
Confidence 4667999999999999999998 599999999999999999999999999999999999999999998754311 1 1 2
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.+.....+++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |+++++++++| .++++
T Consensus 81 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a~~ 157 (257)
T PRK06495 81 AHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLTRR 157 (257)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHHHH
Confidence 333445677888999999999999999999999999999999999999999999999996 45678999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|+++|+.++|+||+++||||++||++++.. .+.
T Consensus 158 lll~g~~~~a~eA~~~GLv~~vv~~~~~~~--~a~--------------------------------------------- 190 (257)
T PRK06495 158 MMLTGYRVPAAELYRRGVIEACLPPEELMP--EAM--------------------------------------------- 190 (257)
T ss_pred HHHcCCeeCHHHHHHcCCcceecCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999887633 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.++++++.||.+++.+|++++.....++.++++.|...+..++.++ |++||+++|
T Consensus 191 --------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~---d~~egi~af- 246 (257)
T PRK06495 191 --------------------EIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAKTE---DAKEAQRAF- 246 (257)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCh---HHHHHHHHH-
Confidence 23789999999999999999998888899999999999999988755 999999999
Q ss_pred ccCCCCCCCCC
Q 017189 323 LDKDKNPKWKP 333 (375)
Q Consensus 323 ~ek~r~P~w~~ 333 (375)
++| |+|+|++
T Consensus 247 ~~k-r~p~~~~ 256 (257)
T PRK06495 247 LEK-RPPVFKG 256 (257)
T ss_pred hcc-CCCCCCC
Confidence 599 8999975
|
|
| >PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-52 Score=396.29 Aligned_cols=249 Identities=23% Similarity=0.339 Sum_probs=218.2
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-hh--
Q 017189 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN-EG-- 82 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~-- 82 (375)
..|+.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++..... ..
T Consensus 5 ~~~~~i~~~~~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 84 (275)
T PRK09120 5 NRWDTVKVEVEDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEI 84 (275)
T ss_pred cccccEEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhH
Confidence 347889999999999999999999999999999999999999999999999999999999999999998743211 11
Q ss_pred --hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HH
Q 017189 83 --AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FF 159 (375)
Q Consensus 83 --~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~ 159 (375)
..+....+.++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .+
T Consensus 85 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~ 164 (275)
T PRK09120 85 LQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRD 164 (275)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHH
Confidence 122234456778899999999999999999999999999999999999999999999999999999999999999 57
Q ss_pred HHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCc
Q 017189 160 GEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSR 239 (375)
Q Consensus 160 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~ 239 (375)
+++|++||++++|+||+++|||++|||++++.....
T Consensus 165 a~~llltg~~~~A~eA~~~Glv~~vv~~~~l~~~a~-------------------------------------------- 200 (275)
T PRK09120 165 ALYYIMTGETFTGRKAAEMGLVNESVPLAQLRARTR-------------------------------------------- 200 (275)
T ss_pred HHHHHhcCCccCHHHHHHcCCcceecCHHHHHHHHH--------------------------------------------
Confidence 999999999999999999999999999888743222
Q ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHH--HHHhhCCCcc-hHHh
Q 017189 240 RTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMV--CHVMMGEVSK-DFFE 316 (375)
Q Consensus 240 ~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~--~~~~~~~~s~-d~~e 316 (375)
+.+++|++.||.+++.+|++++.....++.+.++.|.... ..++. ++ |++|
T Consensus 201 -----------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~d~~e 254 (275)
T PRK09120 201 -----------------------ELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSLD---PEGGREE 254 (275)
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhC---CHHHHHH
Confidence 2378999999999999999999988889999998886543 33453 45 8999
Q ss_pred hHhhhhccC
Q 017189 317 GCRAILLDK 325 (375)
Q Consensus 317 gv~A~l~ek 325 (375)
|+++|+ +|
T Consensus 255 g~~afl-~k 262 (275)
T PRK09120 255 GLKQFL-DD 262 (275)
T ss_pred HHHHHH-hc
Confidence 999995 77
|
|
| >PRK11423 methylmalonyl-CoA decarboxylase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-52 Score=393.88 Aligned_cols=254 Identities=20% Similarity=0.302 Sum_probs=222.3
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeC-C-CCccccCCchhHhhccchhhH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK-G-RAFCAGGDVAAVVRGINEGAK 84 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~-g-~~F~aG~Dl~~~~~~~~~~~~ 84 (375)
.++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+ +|+|||||. | ++||+|+|++++.....+...
T Consensus 2 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~~~~~~ 80 (261)
T PRK11423 2 SMQYVNVVTINKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGGRDPLS 80 (261)
T ss_pred CccceEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhccccHHH
Confidence 3667999999999999999999999999999999999999999987 999999996 3 899999999987542211123
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+...+.+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| ..++++
T Consensus 81 ~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~a~~l 160 (261)
T PRK11423 81 YDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHIVKEM 160 (261)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHHHHHH
Confidence 4445567888899999999999999999999999999999999999999999999999999999999999999 679999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
+++|++++|+||+++||||+|||++++.. .+.
T Consensus 161 ~l~g~~~~a~eA~~~GLv~~vv~~~~l~~--~a~---------------------------------------------- 192 (261)
T PRK11423 161 FFTASPITAQRALAVGILNHVVEVEELED--FTL---------------------------------------------- 192 (261)
T ss_pred HHcCCCcCHHHHHHcCCcCcccCHHHHHH--HHH----------------------------------------------
Confidence 99999999999999999999999877643 222
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc-CCH-HHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL-QGV-GQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~-~~l-~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.++++++.||.+++.+|+.++.... ..+ ...++.|...+..++.++ |++||+.+|
T Consensus 193 -------------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~---d~~eg~~af 250 (261)
T PRK11423 193 -------------------QMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYDSE---DYQEGMNAF 250 (261)
T ss_pred -------------------HHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhCCh---hHHHHHHHH
Confidence 33789999999999999999986543 344 688888888888888655 999999999
Q ss_pred hccCCCCCCCCC
Q 017189 322 LLDKDKNPKWKP 333 (375)
Q Consensus 322 l~ek~r~P~w~~ 333 (375)
.+| |+|+|++
T Consensus 251 -~~k-r~p~~~~ 260 (261)
T PRK11423 251 -LEK-RKPVFVG 260 (261)
T ss_pred -hcc-CCCCCCC
Confidence 599 8999975
|
|
| >PRK08260 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-52 Score=400.88 Aligned_cols=254 Identities=24% Similarity=0.323 Sum_probs=218.1
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhc---c-----
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG---I----- 79 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~----- 79 (375)
++.|.++++++|++||||||++.|+||.+|+.+|.++|+.++.|+++|+|||||.|++||+|+|++++... .
T Consensus 3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (296)
T PRK08260 3 YETIRYDVADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTP 82 (296)
T ss_pred cceEEEeeeCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhcccccccccc
Confidence 56789999999999999999999999999999999999999999999999999999999999999987421 0
Q ss_pred -------c-h--hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHH
Q 017189 80 -------N-E--GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGAS 149 (375)
Q Consensus 80 -------~-~--~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~ 149 (375)
. . ...+......++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~ 162 (296)
T PRK08260 83 VEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASS 162 (296)
T ss_pred cccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchh
Confidence 0 0 01222334467788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhh
Q 017189 150 YFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYH 228 (375)
Q Consensus 150 ~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (375)
++|+|++| .++++|++||++++|+||+++||||+|||++++.. .++
T Consensus 163 ~~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------- 209 (296)
T PRK08260 163 WFLPRLVGLQTALEWVYSGRVFDAQEALDGGLVRSVHPPDELLP--AAR------------------------------- 209 (296)
T ss_pred hhHHHhhCHHHHHHHHHcCCccCHHHHHHCCCceeecCHHHHHH--HHH-------------------------------
Confidence 99999999 67999999999999999999999999999877632 332
Q ss_pred HHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhc-CCchHHHHHHHHHhhhc--CCHHHHHHHHHHHHHHH
Q 017189 229 WMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKA-SPTSLKISLRSIREGRL--QGVGQCLIREYRMVCHV 305 (375)
Q Consensus 229 ~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~-sp~a~~~~k~~l~~~~~--~~l~~~l~~e~~~~~~~ 305 (375)
+.+++|+.. +|.+++.+|++++.... ..+. ....|...+..+
T Consensus 210 ----------------------------------~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~~e~~~~~~~ 254 (296)
T PRK08260 210 ----------------------------------ALAREIADNTSPVSVALTRQMMWRMAGADHPME-AHRVDSRAIYSR 254 (296)
T ss_pred ----------------------------------HHHHHHHhcCChHHHHHHHHHHHhcccCCCcHH-HHHHHHHHHHHH
Confidence 236888885 99999999999987642 2344 345677777777
Q ss_pred hhCCCcchHHhhHhhhhccCCCCCCCCCC
Q 017189 306 MMGEVSKDFFEGCRAILLDKDKNPKWKPS 334 (375)
Q Consensus 306 ~~~~~s~d~~egv~A~l~ek~r~P~w~~~ 334 (375)
+.+ +|++||+++| ++| |+|+|+++
T Consensus 255 ~~~---~d~~egi~af-~~k-r~p~f~~~ 278 (296)
T PRK08260 255 GRS---GDGKEGVSSF-LEK-RPAVFPGK 278 (296)
T ss_pred ccC---hhHHHHHHHH-hcC-CCCCCCCC
Confidence 765 4999999999 598 89999875
|
|
| >PRK05864 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-52 Score=396.16 Aligned_cols=257 Identities=22% Similarity=0.331 Sum_probs=220.0
Q ss_pred CCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc----
Q 017189 6 SQEDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN---- 80 (375)
Q Consensus 6 ~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~---- 80 (375)
.+++.|.++. +++|++||||||+++|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 6 ~~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~~ 85 (276)
T PRK05864 6 STMSLVLVDHPRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEGL 85 (276)
T ss_pred CCCCceEEeeecCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhcccccccc
Confidence 3566788887 78999999999999999999999999999999999999999999999999999999998743110
Q ss_pred -hh---hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCC-CccHHHHHhhc
Q 017189 81 -EG---AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFP-DIGASYFLSRL 155 (375)
Q Consensus 81 -~~---~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p-~~g~~~~l~rl 155 (375)
.. ......+.+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~ 165 (276)
T PRK05864 86 TRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRA 165 (276)
T ss_pred cchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhh
Confidence 01 12233455677888999999999999999999999999999999999999999999999997 78899999999
Q ss_pred ch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHH
Q 017189 156 PG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVID 234 (375)
Q Consensus 156 ~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (375)
+| .++++|++||++++|+||+++|||+++||++++.+ ++.
T Consensus 166 vG~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------- 206 (276)
T PRK05864 166 IGSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDEQLLD--TCY------------------------------------- 206 (276)
T ss_pred hCHHHHHHHHHcCCccCHHHHHHcCCcceeeCHHHHHH--HHH-------------------------------------
Confidence 99 57999999999999999999999999999887633 222
Q ss_pred HHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcC-CHHHHHHHHHHHHH-HHhhCCCcc
Q 017189 235 KCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQ-GVGQCLIREYRMVC-HVMMGEVSK 312 (375)
Q Consensus 235 ~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~~-~~~~~~~s~ 312 (375)
+.+++|+..||.+++.+|+.++..... ++.+.+..|..... ..+. ++
T Consensus 207 ----------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~---~~ 255 (276)
T PRK05864 207 ----------------------------AIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRLL---TA 255 (276)
T ss_pred ----------------------------HHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhcc---Ch
Confidence 237899999999999999999877664 78888888765332 2454 45
Q ss_pred hHHhhHhhhhccCCCCCCCCCC
Q 017189 313 DFFEGCRAILLDKDKNPKWKPS 334 (375)
Q Consensus 313 d~~egv~A~l~ek~r~P~w~~~ 334 (375)
|++||+++| .+| |+|+|++.
T Consensus 256 d~~e~~~af-~~k-r~p~~~~~ 275 (276)
T PRK05864 256 NFEEAVAAR-AEK-RPPVFTDD 275 (276)
T ss_pred hHHHHHHHH-hcc-CCCCCCCC
Confidence 999999999 599 88999753
|
|
| >PRK06072 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-52 Score=388.46 Aligned_cols=247 Identities=24% Similarity=0.359 Sum_probs=220.1
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF 90 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 90 (375)
|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++.... ...+...++
T Consensus 2 i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~--~~~~~~~~~ 79 (248)
T PRK06072 2 IKVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPDF--AIDLRETFY 79 (248)
T ss_pred eEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhhh--HHHHHHHHH
Confidence 678889999999999999999999999999999999999999999999999999999999999875321 123344556
Q ss_pred HHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCcc
Q 017189 91 ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARL 170 (375)
Q Consensus 91 ~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i 170 (375)
.++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++|.+++++++||+++
T Consensus 80 ~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll~g~~~ 159 (248)
T PRK06072 80 PIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILVLGGEF 159 (248)
T ss_pred HHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHHhCCcc
Confidence 77888999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred CHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHHh
Q 017189 171 DGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSALE 250 (375)
Q Consensus 171 ~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L~ 250 (375)
+|+||+++||||.+ + ++ +.++.
T Consensus 160 ~a~eA~~~Glv~~~-~--~~--~~~a~----------------------------------------------------- 181 (248)
T PRK06072 160 TAEEAERWGLLKIS-E--DP--LSDAE----------------------------------------------------- 181 (248)
T ss_pred CHHHHHHCCCcccc-c--hH--HHHHH-----------------------------------------------------
Confidence 99999999999953 2 33 22222
Q ss_pred hcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCCCCC
Q 017189 251 SESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPK 330 (375)
Q Consensus 251 ~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~P~ 330 (375)
+.++++++.||.+++.+|++++......+.+.++.|...+..++.++ |++||+++| .+| |+|+
T Consensus 182 ------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---d~~eg~~af-~~k-r~p~ 244 (248)
T PRK06072 182 ------------EMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGKTE---DFKEGISSF-KEK-REPK 244 (248)
T ss_pred ------------HHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhCCh---hHHHHHHHH-hcC-CCCC
Confidence 33789999999999999999998878889999999999999988755 999999999 598 8999
Q ss_pred CCCC
Q 017189 331 WKPS 334 (375)
Q Consensus 331 w~~~ 334 (375)
|+++
T Consensus 245 ~~~~ 248 (248)
T PRK06072 245 FKGI 248 (248)
T ss_pred CCCC
Confidence 9863
|
|
| >PRK06144 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-52 Score=392.49 Aligned_cols=250 Identities=26% Similarity=0.381 Sum_probs=218.1
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh--hH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG--AK 84 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~--~~ 84 (375)
.+.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++....... ..
T Consensus 7 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~ 86 (262)
T PRK06144 7 TDELLLEVRGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFSTAEDAVA 86 (262)
T ss_pred CCceEEEeeCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhccchhHHHH
Confidence 55799999999999999999999999999999999999999999999999999999 7999999999875432111 23
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccc-cCCCCCccHHHHHhhcch-HHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETA-LGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~-~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
+...+.+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||++ +|++|++|++++|++++| ..+++
T Consensus 87 ~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~~~a~~ 166 (262)
T PRK06144 87 YERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGAARVKD 166 (262)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCHHHHHH
Confidence 3445567788899999999999999999999999999999999999999999997 999999999999999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
+++||+.++|+||+++||||+|||++++.+ +++
T Consensus 167 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~--------------------------------------------- 199 (262)
T PRK06144 167 MLFTARLLEAEEALAAGLVNEVVEDAALDA--RAD--------------------------------------------- 199 (262)
T ss_pred HHHcCCCcCHHHHHHcCCcCeecCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999877633 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.+++|++.||.+++.+|+.++......+ ..+.+.+..++.++ |++||+++|
T Consensus 200 --------------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~l----~~~~~~~~~~~~~~---~~~e~~~af- 251 (262)
T PRK06144 200 --------------------ALAELLAAHAPLTLRATKEALRRLRREGL----PDGDDLIRMCYMSE---DFREGVEAF- 251 (262)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHhhhcCH----HHHHHHHHHHhcCh---HHHHHHHHH-
Confidence 33789999999999999999987655544 34456667777654 999999999
Q ss_pred ccCCCCCCCCC
Q 017189 323 LDKDKNPKWKP 333 (375)
Q Consensus 323 ~ek~r~P~w~~ 333 (375)
.+| |+|+|++
T Consensus 252 ~~k-r~p~~~~ 261 (262)
T PRK06144 252 LEK-RPPKWKG 261 (262)
T ss_pred hcC-CCCCCCC
Confidence 598 8899975
|
|
| >PRK07396 dihydroxynaphthoic acid synthetase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-52 Score=393.68 Aligned_cols=255 Identities=22% Similarity=0.350 Sum_probs=219.1
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchhhHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKF 85 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~~ 85 (375)
+++.|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++..........
T Consensus 11 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~ 90 (273)
T PRK07396 11 EYEDILYKSADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGGYVDDDG 90 (273)
T ss_pred CCcceEEEecCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhcccccchhh
Confidence 467899999999999999999999999999999999999999999999999999999 6999999999874321111110
Q ss_pred HH--HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 86 FS--KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 86 ~~--~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.. ....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++| .++++
T Consensus 91 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a~~ 170 (273)
T PRK07396 91 VPRLNVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKARE 170 (273)
T ss_pred hhhhHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHHHH
Confidence 11 2345677889999999999999999999999999999999999999999999999999999999999999 57999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||+.++|+||+++||||+|||++++.+ .+.
T Consensus 171 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~--~a~--------------------------------------------- 203 (273)
T PRK07396 171 IWFLCRQYDAQEALDMGLVNTVVPLADLEK--ETV--------------------------------------------- 203 (273)
T ss_pred HHHhCCCcCHHHHHHcCCcCeecCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999877633 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.+++|++.||.+++.+|++++.... .+....+.|...+..++.++ |++||+++|
T Consensus 204 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~~~---d~~egi~af- 258 (273)
T PRK07396 204 --------------------RWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYMTE---EAQEGRNAF- 258 (273)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHhcCh---hHHHHHHHH-
Confidence 23789999999999999999987644 45555556777777777654 999999999
Q ss_pred ccCCCCCCCCCC
Q 017189 323 LDKDKNPKWKPS 334 (375)
Q Consensus 323 ~ek~r~P~w~~~ 334 (375)
.+| |+|+|++.
T Consensus 259 ~~k-r~p~~~~~ 269 (273)
T PRK07396 259 NEK-RQPDFSKF 269 (273)
T ss_pred hCC-CCCCCCCC
Confidence 599 89999863
|
|
| >PRK06143 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-52 Score=390.99 Aligned_cols=245 Identities=24% Similarity=0.350 Sum_probs=218.6
Q ss_pred CcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hHH
Q 017189 9 DQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AKF 85 (375)
Q Consensus 9 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~~ 85 (375)
.++.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++....... ..+
T Consensus 6 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~ 85 (256)
T PRK06143 6 AHAGVTRDDRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATLDQASAEAF 85 (256)
T ss_pred ccceeeecCCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhcChhhHHHH
Confidence 3577774 689999999999999999999999999999999999999999999999 7999999999875432211 334
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
...+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |++|++++|++++| .++++++
T Consensus 86 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a~~l~ 164 (256)
T PRK06143 86 ISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWARTRWLL 164 (256)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHHHHHH
Confidence 555677888999999999999999999999999999999999999999999999998 88888999999999 5799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||++||++++.. .+.
T Consensus 165 l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~----------------------------------------------- 195 (256)
T PRK06143 165 LTGETIDAAQALAWGLVDRVVPLAELDA--AVE----------------------------------------------- 195 (256)
T ss_pred HcCCcCCHHHHHHCCCcCeecCHHHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999887643 221
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+.+++++..||.+++.+|++++.....++.+.+..|...+..++.++ |++||+++| ++
T Consensus 196 ------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---d~~e~~~af-~e 253 (256)
T PRK06143 196 ------------------RLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFLTG---EPQRHMAAF-LN 253 (256)
T ss_pred ------------------HHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhcCh---HHHHHHHHH-Hh
Confidence 23789999999999999999999888899999999999999988755 999999999 48
Q ss_pred C
Q 017189 325 K 325 (375)
Q Consensus 325 k 325 (375)
|
T Consensus 254 k 254 (256)
T PRK06143 254 R 254 (256)
T ss_pred h
Confidence 8
|
|
| >PRK07509 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-52 Score=391.26 Aligned_cols=251 Identities=25% Similarity=0.375 Sum_probs=221.5
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHH-
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKF- 85 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~- 85 (375)
++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..+
T Consensus 2 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 81 (262)
T PRK07509 2 MDRVSVTIEDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSPGNAVKLLF 81 (262)
T ss_pred CceEEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhcccchhhhhHh
Confidence 456899999999999999999999999999999999999999999999999999999999999999876432111 111
Q ss_pred ------HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H
Q 017189 86 ------FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F 158 (375)
Q Consensus 86 ------~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~ 158 (375)
...+.+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~ 161 (262)
T PRK07509 82 KRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKD 161 (262)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhCHH
Confidence 122345666788999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
.++++++||++++|+||+++||||++|++ + ..++.
T Consensus 162 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~--~--~~~a~----------------------------------------- 196 (262)
T PRK07509 162 VARELTYTARVFSAEEALELGLVTHVSDD--P--LAAAL----------------------------------------- 196 (262)
T ss_pred HHHHHHHcCCCcCHHHHHHcCChhhhhch--H--HHHHH-----------------------------------------
Confidence 79999999999999999999999999954 2 11221
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhH
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGC 318 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv 318 (375)
+.++++++.||.++..+|++++.....++.+++..|.+.+..++.++ |++||+
T Consensus 197 ------------------------~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~---d~~e~~ 249 (262)
T PRK07509 197 ------------------------ALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLLGK---NQKIAV 249 (262)
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCh---hHHHHH
Confidence 33789999999999999999999888889999999999999998765 999999
Q ss_pred hhhhccCCCCCCCC
Q 017189 319 RAILLDKDKNPKWK 332 (375)
Q Consensus 319 ~A~l~ek~r~P~w~ 332 (375)
++| .+| |+|.|+
T Consensus 250 ~af-~ek-r~p~~~ 261 (262)
T PRK07509 250 KAQ-MKK-RAPKFL 261 (262)
T ss_pred HHH-hcC-CCCCCC
Confidence 999 599 889996
|
|
| >PRK07260 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-52 Score=388.66 Aligned_cols=247 Identities=24% Similarity=0.403 Sum_probs=221.0
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch-h----
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE-G---- 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~---- 82 (375)
++.+.++.+++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...... .
T Consensus 1 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK07260 1 FEHIIYEVEDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSL 80 (255)
T ss_pred CCceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhH
Confidence 35688999999999999999999999999999999999999999999999999999999999999987542211 1
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
..+.+.+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++|++| ..++
T Consensus 81 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~ 160 (255)
T PRK07260 81 VKIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRAT 160 (255)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHH
Confidence 123344567788899999999999999999999999999999999999999999999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||++++|+||+++||||++||++++.+...
T Consensus 161 ~l~l~g~~~sa~eA~~~Glv~~vv~~~~l~~~a~---------------------------------------------- 194 (255)
T PRK07260 161 HLAMTGEALTAEKALEYGFVYRVAESEKLEKTCE---------------------------------------------- 194 (255)
T ss_pred HHHHhCCccCHHHHHHcCCcceecCHhHHHHHHH----------------------------------------------
Confidence 9999999999999999999999999877633222
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.++++++.+|.+++.+|+.++.....++.+.+..|...+..++.++ |++||+++|
T Consensus 195 ---------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~---~~~e~~~af 250 (255)
T PRK07260 195 ---------------------QLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAFKE---DFKEGVRAF 250 (255)
T ss_pred ---------------------HHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHH
Confidence 23789999999999999999999888899999999999999888654 999999999
Q ss_pred hccC
Q 017189 322 LLDK 325 (375)
Q Consensus 322 l~ek 325 (375)
.+|
T Consensus 251 -~~k 253 (255)
T PRK07260 251 -SER 253 (255)
T ss_pred -Hhc
Confidence 487
|
|
| >TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=385.72 Aligned_cols=246 Identities=27% Similarity=0.356 Sum_probs=213.4
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF 90 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 90 (375)
|.++++++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++... ....+.....
T Consensus 3 v~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~~--~~~~~~~~~~ 79 (251)
T TIGR03189 3 VWLERDGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMPD--QCAAMLASLH 79 (251)
T ss_pred EEEEeeCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCch--hHHHHHHHHH
Confidence 778889999999999997 5999999999999999999999999999999999999999999975321 1123334456
Q ss_pred HHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCc
Q 017189 91 ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGAR 169 (375)
Q Consensus 91 ~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~ 169 (375)
+++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++ ++++|++++| ..+++|++||++
T Consensus 80 ~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~-~~~~l~~~vg~~~a~~l~ltg~~ 158 (251)
T TIGR03189 80 KLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAPA-ASCLLPERMGRVAAEDLLYSGRS 158 (251)
T ss_pred HHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCc-hHHHHHHHhCHHHHHHHHHcCCC
Confidence 67888999999999999999999999999999999999999999999999999874 5789999999 679999999999
Q ss_pred cCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHH
Q 017189 170 LDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSAL 249 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L 249 (375)
++|+||+++|||++|+|+.+ ..++.
T Consensus 159 ~~a~eA~~~Glv~~v~~~~~----~~a~~--------------------------------------------------- 183 (251)
T TIGR03189 159 IDGAEGARIGLANAVAEDPE----NAALA--------------------------------------------------- 183 (251)
T ss_pred CCHHHHHHCCCcceecCcHH----HHHHH---------------------------------------------------
Confidence 99999999999999998532 12220
Q ss_pred hhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHH-HHHHHHHHHhhCCCcchHHhhHhhhhccCCCC
Q 017189 250 ESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLI-REYRMVCHVMMGEVSKDFFEGCRAILLDKDKN 328 (375)
Q Consensus 250 ~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~-~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~ 328 (375)
.+++++++.||.+++.+|++++.....++.+++. .|...+..++.++ |++||+++| .+| |+
T Consensus 184 -------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~s~---d~~eg~~af-~ek-r~ 245 (251)
T TIGR03189 184 -------------WFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMATH---DAVEGLNAF-LEK-RP 245 (251)
T ss_pred -------------HHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhCCH---hHHHHHHHH-Hhc-CC
Confidence 1157899999999999999999887888887764 7777788888654 999999999 599 88
Q ss_pred CCCCC
Q 017189 329 PKWKP 333 (375)
Q Consensus 329 P~w~~ 333 (375)
|.|.+
T Consensus 246 p~~~~ 250 (251)
T TIGR03189 246 ALWED 250 (251)
T ss_pred CCCCC
Confidence 99975
|
This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation. |
| >PRK08259 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-52 Score=387.31 Aligned_cols=248 Identities=25% Similarity=0.298 Sum_probs=214.2
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSK 88 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 88 (375)
+.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++......... ...
T Consensus 3 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~~~~~~~-~~~ 81 (254)
T PRK08259 3 MSVRVERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTGRGNRLH-PSG 81 (254)
T ss_pred ceEEEEEECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhcccchhhh-hhh
Confidence 3488999999999999999999999999999999999999999999999999999999999999987543211100 000
Q ss_pred HHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcC
Q 017189 89 EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTG 167 (375)
Q Consensus 89 ~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG 167 (375)
...+...+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| ..+++++++|
T Consensus 82 ~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~lll~g 161 (254)
T PRK08259 82 DGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDLILTG 161 (254)
T ss_pred cchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHHHHHHcC
Confidence 111222334799999999999999999999999999999999999999999999999999999999999 5799999999
Q ss_pred CccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILS 247 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~ 247 (375)
+.++|+||+++||||+|||++++.+ .+.
T Consensus 162 ~~~~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------------------- 189 (254)
T PRK08259 162 RPVDADEALAIGLANRVVPKGQARA--AAE-------------------------------------------------- 189 (254)
T ss_pred CccCHHHHHHcCCCCEeeChhHHHH--HHH--------------------------------------------------
Confidence 9999999999999999999987743 222
Q ss_pred HHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCC
Q 017189 248 ALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDK 327 (375)
Q Consensus 248 ~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r 327 (375)
+.+++|++.||.+++.+|++++.....++.++++.|...+...+. + |++||+++|+ +|.|
T Consensus 190 ---------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~-~---d~~egi~af~-~~~~ 249 (254)
T PRK08259 190 ---------------ELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVLA-A---EALEGAARFA-AGAG 249 (254)
T ss_pred ---------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh-h---HHHHHHHHHH-hhhc
Confidence 237899999999999999999988788899999999887777775 5 9999999995 7756
Q ss_pred CC
Q 017189 328 NP 329 (375)
Q Consensus 328 ~P 329 (375)
+|
T Consensus 250 ~~ 251 (254)
T PRK08259 250 RH 251 (254)
T ss_pred cc
Confidence 55
|
|
| >PLN02888 enoyl-CoA hydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-51 Score=387.05 Aligned_cols=253 Identities=27% Similarity=0.389 Sum_probs=219.7
Q ss_pred CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 8 EDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
...|.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ...
T Consensus 8 ~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~~~ 85 (265)
T PLN02888 8 ENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVFKG--DVK 85 (265)
T ss_pred CCeEEEEeccCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhccc--hhh
Confidence 44678886 799999999999999999999999999999999999999999999999999999999986532111 111
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
....+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .++++|++
T Consensus 86 ~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l 165 (265)
T PLN02888 86 DVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGANRAREVSL 165 (265)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHHHHHHHHH
Confidence 12245667789999999999999999999999999999999999999999999999999999999999999 57999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||++++|+||+++||||++||++++.+ ++.
T Consensus 166 tg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------ 195 (265)
T PLN02888 166 TAMPLTAETAERWGLVNHVVEESELLK--KAR------------------------------------------------ 195 (265)
T ss_pred hCCccCHHHHHHcCCccEeeChHHHHH--HHH------------------------------------------------
Confidence 999999999999999999999877633 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.++++++.+|.+++.+|++++.....++.+++..|...+..++.. .++|++||+++| ++|
T Consensus 196 -----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~~~d~~e~~~af-~ek 256 (265)
T PLN02888 196 -----------------EVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYNG-MTKEQFQKMQEF-IAG 256 (265)
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcc-CCHHHHHHHHHH-Hhc
Confidence 3378999999999999999999888889999999998887777631 246999999999 598
Q ss_pred CCCCCCC
Q 017189 326 DKNPKWK 332 (375)
Q Consensus 326 ~r~P~w~ 332 (375)
|+|+=.
T Consensus 257 -r~~~~~ 262 (265)
T PLN02888 257 -RSSKKP 262 (265)
T ss_pred -CCCCCC
Confidence 777643
|
|
| >PRK07827 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-51 Score=387.22 Aligned_cols=251 Identities=25% Similarity=0.344 Sum_probs=223.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc-chh---h
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI-NEG---A 83 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~---~ 83 (375)
+..+.++.+++|++|+||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ... .
T Consensus 5 ~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 84 (260)
T PRK07827 5 DTLVRYAVDGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGGGDPYDAAV 84 (260)
T ss_pred CcceEEEeeCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcccCchhHHH
Confidence 456888999999999999999999999999999999999999999999999999999999999999875421 111 2
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYV 163 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l 163 (375)
.+...+.+++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++++++..++++
T Consensus 85 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~~l 164 (260)
T PRK07827 85 ARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAARY 164 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHHHH
Confidence 34455677888999999999999999999999999999999999999999999999999999999999999877789999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
+++|+.++|++|+++|||++++++ +.. .+.
T Consensus 165 ~l~g~~~~a~eA~~~Glv~~v~~~--l~~--~a~---------------------------------------------- 194 (260)
T PRK07827 165 YLTGEKFGAAEAARIGLVTAAADD--VDA--AVA---------------------------------------------- 194 (260)
T ss_pred HHhCCccCHHHHHHcCCcccchHH--HHH--HHH----------------------------------------------
Confidence 999999999999999999999742 422 111
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhc
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILL 323 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ 323 (375)
+.++++++.||.+++.+|+++++.....+.+.++.|...+..++.++ |++||+++| .
T Consensus 195 -------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~af-~ 251 (260)
T PRK07827 195 -------------------ALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFVSD---EAREGMTAF-L 251 (260)
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCh---hHHHHHHHH-h
Confidence 33789999999999999999999888899999999999999988755 999999999 5
Q ss_pred cCCCCCCCC
Q 017189 324 DKDKNPKWK 332 (375)
Q Consensus 324 ek~r~P~w~ 332 (375)
+| |+|+|+
T Consensus 252 ~k-r~p~~~ 259 (260)
T PRK07827 252 QK-RPPRWA 259 (260)
T ss_pred cC-CCCCCC
Confidence 98 789995
|
|
| >PRK06023 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=386.07 Aligned_cols=244 Identities=22% Similarity=0.350 Sum_probs=215.6
Q ss_pred cEEEEEeCC---EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 10 QVLEEETSF---VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 10 ~v~~~~~~~---v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
.|.++++++ |++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++.........+.
T Consensus 4 ~i~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~ 83 (251)
T PRK06023 4 HILVERPGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGTSFG 83 (251)
T ss_pred eEEEEeecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhccccchhhH
Confidence 588888774 99999999999999999999999999999999999999999999999999999998754321112333
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+.+++..+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++| .+++++++
T Consensus 84 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~l~l 163 (251)
T PRK06023 84 SEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQRAFALLA 163 (251)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHHHHHHHH
Confidence 44557788899999999999999999999999999999999999999999999999999999999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.++|+||+++|||+++||++++.. ++.
T Consensus 164 ~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------ 193 (251)
T PRK06023 164 LGEGFSAEAAQEAGLIWKIVDEEAVEA--ETL------------------------------------------------ 193 (251)
T ss_pred hCCCCCHHHHHHcCCcceeeCHHHHHH--HHH------------------------------------------------
Confidence 999999999999999999999877643 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.+++|++.||.+++.+|++++... ..+.+.++.|...+..++.++ |++||+++|+ +|
T Consensus 194 -----------------~~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~~~---~~~e~~~af~-e~ 251 (251)
T PRK06023 194 -----------------KAAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLKSA---EARAAFEAFM-RR 251 (251)
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhCCH---HHHHHHHHHh-cC
Confidence 3378999999999999999998764 468889999988888888655 9999999994 64
|
|
| >PRK07854 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-51 Score=381.55 Aligned_cols=240 Identities=22% Similarity=0.324 Sum_probs=213.9
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF 90 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 90 (375)
|.++++++|++||||||++.|++|.+|+.+|.++++.++.+ ++|+|||||.|++||+|+|+++... ...+...+.
T Consensus 2 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~----~~~~~~~~~ 76 (243)
T PRK07854 2 IGVTRDGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY----ADDFPDALI 76 (243)
T ss_pred ceEEEeCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh----HHHHHHHHH
Confidence 67888999999999999999999999999999999999865 8999999999999999999985321 123444556
Q ss_pred HHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCc
Q 017189 91 ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGAR 169 (375)
Q Consensus 91 ~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~ 169 (375)
+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| ..+++|++||++
T Consensus 77 ~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~ltg~~ 156 (243)
T PRK07854 77 EMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAMLLGAEK 156 (243)
T ss_pred HHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHHHcCCC
Confidence 7788899999999999999999999999999999999999999999999999999999999999999 579999999999
Q ss_pred cCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHH
Q 017189 170 LDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSAL 249 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L 249 (375)
++|+||+++|||++|++ ++ ++.
T Consensus 157 ~~a~eA~~~Glv~~v~~---~~---~a~---------------------------------------------------- 178 (243)
T PRK07854 157 LTAEQALATGMANRIGT---LA---DAQ---------------------------------------------------- 178 (243)
T ss_pred cCHHHHHHCCCcccccC---HH---HHH----------------------------------------------------
Confidence 99999999999999975 21 222
Q ss_pred hhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCCCC
Q 017189 250 ESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNP 329 (375)
Q Consensus 250 ~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~P 329 (375)
+.+++|++.||.+++.+|+.++.. ..++++++.|...+..++.++ |++||+++| .+| |+|
T Consensus 179 -------------~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~~~---d~~eg~~af-~~k-r~p 238 (243)
T PRK07854 179 -------------AWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWASQ---DAIEAQVAR-IEK-RPP 238 (243)
T ss_pred -------------HHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhcCc---hHHHHHHHH-hCC-CCC
Confidence 236899999999999999999875 678999999999998888765 999999999 598 889
Q ss_pred CCCC
Q 017189 330 KWKP 333 (375)
Q Consensus 330 ~w~~ 333 (375)
.|++
T Consensus 239 ~~~~ 242 (243)
T PRK07854 239 KFQG 242 (243)
T ss_pred CCCC
Confidence 9975
|
|
| >COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-51 Score=385.63 Aligned_cols=251 Identities=30% Similarity=0.499 Sum_probs=220.9
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhh-ccc-hhhH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVR-GIN-EGAK 84 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~-~~~-~~~~ 84 (375)
++..+.++..++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||+|++||+|+|++.+.. ... ....
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~~~~~~~~~~ 82 (257)
T COG1024 3 TYETILVEREDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLSPEDGNAAEN 82 (257)
T ss_pred CCCeeEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhcccchhHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999875 111 1134
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+....+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++++|++| ..+.+|
T Consensus 83 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~~l 162 (257)
T COG1024 83 LMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKEL 162 (257)
T ss_pred HHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHHHH
Confidence 5566677899999999999999999999999999999999999999999999999999998899999999999 579999
Q ss_pred hhcCCccCHHHHHHcCccceecCC-ccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPS-SRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
++||+.++|+||+++|||+++|+. +++.. .+.
T Consensus 163 ~ltg~~~~a~eA~~~Glv~~vv~~~~~l~~--~a~--------------------------------------------- 195 (257)
T COG1024 163 LLTGEPISAAEALELGLVDEVVPDAEELLE--RAL--------------------------------------------- 195 (257)
T ss_pred HHcCCcCCHHHHHHcCCcCeeeCCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999986 46532 221
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+++++++. +|.++..+|+.++......+.+.+..|...+...+.+ +|++||+++|+
T Consensus 196 --------------------~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~d~~eg~~a~~ 251 (257)
T COG1024 196 --------------------ELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFSS---EDFREGVRAFL 251 (257)
T ss_pred --------------------HHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhcC---hhHHHHHHHHH
Confidence 22455555 9999999999999987766999999999998886654 59999999995
Q ss_pred ccCCCCCCC
Q 017189 323 LDKDKNPKW 331 (375)
Q Consensus 323 ~ek~r~P~w 331 (375)
+ |+|.|
T Consensus 252 -~--r~p~~ 257 (257)
T COG1024 252 -E--RKPVF 257 (257)
T ss_pred -c--cCCCC
Confidence 6 67987
|
|
| >PRK05870 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=385.47 Aligned_cols=244 Identities=24% Similarity=0.319 Sum_probs=217.5
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFFS 87 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~ 87 (375)
..|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... .....
T Consensus 3 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK05870 3 DPVLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAPGRPAEDGLR 82 (249)
T ss_pred ccEEEEccCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhcccccchHHHHH
Confidence 34888999999999999999999999999999999999999999999999999999999999999986532211 23345
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+++++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .+++++++|
T Consensus 83 ~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~lt 162 (249)
T PRK05870 83 RIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVARAALLF 162 (249)
T ss_pred HHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHHHHHHHh
Confidence 5566777899999999999999999999999999999999999999999999999999999999999999 579999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|++++|+||+++||||++| +++.. ++.
T Consensus 163 g~~~~a~eA~~~Glv~~vv--~~l~~--~a~------------------------------------------------- 189 (249)
T PRK05870 163 GMRFDAEAAVRHGLALMVA--DDPVA--AAL------------------------------------------------- 189 (249)
T ss_pred CCccCHHHHHHcCCHHHHH--hhHHH--HHH-------------------------------------------------
Confidence 9999999999999999999 44522 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL-QGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.++++++.||.+++.+|++++.... ..+.++++.|...+...+.++ |++||+++|+ ++
T Consensus 190 ----------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~~~---d~~eg~~af~-~~ 249 (249)
T PRK05870 190 ----------------ELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQSP---EFAARLAAAQ-RR 249 (249)
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhcCh---hHHHHHHHHh-cC
Confidence 33789999999999999999998877 789999999999999988765 9999999995 53
|
|
| >PLN02921 naphthoate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-51 Score=392.53 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=215.6
Q ss_pred CCCcEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-
Q 017189 7 QEDQVLEEE--TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG- 82 (375)
Q Consensus 7 ~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~- 82 (375)
+++.|.+++ +++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++.......
T Consensus 63 ~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~~~~~ 142 (327)
T PLN02921 63 EFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDGYVGP 142 (327)
T ss_pred CCceEEEEEecCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhcccccch
Confidence 467888988 599999999999999999999999999999999999999999999999 8999999999874321111
Q ss_pred hHHHH-HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 83 AKFFS-KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 83 ~~~~~-~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
..... ...+++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++
T Consensus 143 ~~~~~~~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~~~A 222 (327)
T PLN02921 143 DDAGRLNVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQKKA 222 (327)
T ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 11111 1235677889999999999999999999999999999999999999999999999999999999999999 679
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
++|+++|+.++|+||+++||||+|||++++.. ++.
T Consensus 223 ~ellltG~~~~A~eA~~~GLV~~vv~~~~l~~--~a~------------------------------------------- 257 (327)
T PLN02921 223 REMWFLARFYTASEALKMGLVNTVVPLDELEG--ETV------------------------------------------- 257 (327)
T ss_pred HHHHHcCCcCCHHHHHHCCCceEEeCHHHHHH--HHH-------------------------------------------
Confidence 99999999999999999999999999887743 222
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+.+++|+++||.+++.+|++++..... .......+...+..++.+ +|++||+++
T Consensus 258 ----------------------~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~s---~d~~egi~A 311 (327)
T PLN02921 258 ----------------------KWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFYGS---EEGNEGRTA 311 (327)
T ss_pred ----------------------HHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHhcC---HHHHHHHHH
Confidence 237899999999999999999876543 333333344666677755 599999999
Q ss_pred hhccCCCCCCCCC
Q 017189 321 ILLDKDKNPKWKP 333 (375)
Q Consensus 321 ~l~ek~r~P~w~~ 333 (375)
| ++| |+|+|+.
T Consensus 312 f-~ek-r~p~f~~ 322 (327)
T PLN02921 312 Y-LEG-RAPDFSK 322 (327)
T ss_pred H-hcc-CCCCCCC
Confidence 9 599 8999975
|
|
| >PRK12478 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-51 Score=391.71 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=214.1
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchh-Hhh---c---c
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAA-VVR---G---I 79 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~-~~~---~---~ 79 (375)
+++.|.++.+++|++||||||+++|+||.+|+.+|.++++.++.|++||+|||||+|++||+|+|+++ +.. . .
T Consensus 3 ~~~~v~~~~~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~ 82 (298)
T PRK12478 3 DFQTLLYTTAGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTD 82 (298)
T ss_pred CceEEEEeccCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccc
Confidence 35678999999999999999999999999999999999999999999999999999999999999986 211 0 0
Q ss_pred c--h-hhHH---HHH---HHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecccccc-CCCCCccHH
Q 017189 80 N--E-GAKF---FSK---EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETAL-GLFPDIGAS 149 (375)
Q Consensus 80 ~--~-~~~~---~~~---~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~-G~~p~~g~~ 149 (375)
. . ...+ ... ...++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++ |+++ +++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~ 160 (298)
T PRK12478 83 GRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGM 160 (298)
T ss_pred cccCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhH
Confidence 0 0 0111 011 1235567889999999999999999999999999999999999999999997 8875 333
Q ss_pred HHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhh
Q 017189 150 YFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYH 228 (375)
Q Consensus 150 ~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (375)
+ + +.+| .++++|++||++++|+||+++||||+|||++++.. ++.
T Consensus 161 ~-~-~~vG~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~--~a~------------------------------- 205 (298)
T PRK12478 161 W-L-YRLSLAKVKWHSLTGRPLTGVQAAEAELINEAVPFERLEA--RVA------------------------------- 205 (298)
T ss_pred H-H-HHhhHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHH--HHH-------------------------------
Confidence 3 2 4578 67999999999999999999999999999988743 222
Q ss_pred HHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHHhh
Q 017189 229 WMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL-QGVGQCLIREYRMVCHVMM 307 (375)
Q Consensus 229 ~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~ 307 (375)
+.+++|+..||.+++.+|++++.... .++.++++.|...+..++.
T Consensus 206 ----------------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~ 251 (298)
T PRK12478 206 ----------------------------------EVATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRN 251 (298)
T ss_pred ----------------------------------HHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc
Confidence 23789999999999999999998766 4699999999999999987
Q ss_pred CCCcchHH--------hhHhhhhccCCCCCCCCCCCc
Q 017189 308 GEVSKDFF--------EGCRAILLDKDKNPKWKPSKL 336 (375)
Q Consensus 308 ~~~s~d~~--------egv~A~l~ek~r~P~w~~~~~ 336 (375)
++ |++ ||++|| .+| |+|+|+.-+.
T Consensus 252 s~---d~~e~~~~~~~egv~Af-~ek-R~p~f~~~~~ 283 (298)
T PRK12478 252 TP---DALEFIRTAETQGVRAA-VER-RDGPFGDYSQ 283 (298)
T ss_pred Ch---hHHHHHHHHHHHHHHHH-HHh-cCCcccccCc
Confidence 55 997 599999 599 8999997653
|
|
| >PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-50 Score=380.39 Aligned_cols=249 Identities=18% Similarity=0.250 Sum_probs=216.8
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh---h
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---A 83 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---~ 83 (375)
+++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++ +++|+|||||.|++||+|+|++++....... .
T Consensus 2 ~~~~i~~~~~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~ 79 (255)
T PRK07112 2 DYQTIRVRQQGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPDAGRADL 79 (255)
T ss_pred CCceEEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhccccchhhh
Confidence 4667999999999999999999999999999999999999998 3699999999999999999999876432211 1
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.....+.+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +.+|++++| .++++
T Consensus 80 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~~ 158 (255)
T PRK07112 80 IDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAHY 158 (255)
T ss_pred hhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHHH
Confidence 1233445778889999999999999999999999999999999999999999999999999875 467899999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
++++|++++|+||+++||||++||+++. ...
T Consensus 159 l~l~g~~~~a~eA~~~Glv~~vv~~~~~--~~~----------------------------------------------- 189 (255)
T PRK07112 159 MTLMTQPVTAQQAFSWGLVDAYGANSDT--LLR----------------------------------------------- 189 (255)
T ss_pred HHHhCCcccHHHHHHcCCCceecCcHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999997542 111
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.++++++.||.+++.+|++++.. ...+.+.++.|...+..++.++ |++||+++|
T Consensus 190 --------------------~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~~~---~~~eg~~af- 244 (255)
T PRK07112 190 --------------------KHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFADP---ENLRKIARY- 244 (255)
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHcCh---HHHHHHHHH-
Confidence 226899999999999999999875 5578999999999998888765 999999999
Q ss_pred ccCCCCCCCCC
Q 017189 323 LDKDKNPKWKP 333 (375)
Q Consensus 323 ~ek~r~P~w~~ 333 (375)
.+| |+|.|+.
T Consensus 245 ~~k-r~p~~~~ 254 (255)
T PRK07112 245 VET-GKFPWEA 254 (255)
T ss_pred HcC-CCCCCCC
Confidence 598 8899973
|
|
| >PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-51 Score=379.62 Aligned_cols=243 Identities=31% Similarity=0.517 Sum_probs=223.6
Q ss_pred EEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHHHHHH
Q 017189 12 LEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFFSKEF 90 (375)
Q Consensus 12 ~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~~~~ 90 (375)
.++.+++|++|+||||++.|++|.+|+.+|.++|+.++.|+++++||++|.|++||+|.|++++....... ..+...++
T Consensus 1 ~~~~~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~~~~~~~~~~~~~~ 80 (245)
T PF00378_consen 1 KYEIEDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNSDEEEAREFFRRFQ 80 (245)
T ss_dssp EEEEETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhccccccccccchhhc
Confidence 47899999999999999999999999999999999999999999999999999999999999987763222 56777888
Q ss_pred HHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCc
Q 017189 91 ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGAR 169 (375)
Q Consensus 91 ~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~ 169 (375)
.++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| ..++++++||++
T Consensus 81 ~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l~g~~ 160 (245)
T PF00378_consen 81 ELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLLTGEP 160 (245)
T ss_dssp HHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred cccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeeccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 579999999999
Q ss_pred cCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHH
Q 017189 170 LDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSAL 249 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L 249 (375)
++|+||+++||||+++|++++.....
T Consensus 161 ~~a~eA~~~Glv~~v~~~~~l~~~a~------------------------------------------------------ 186 (245)
T PF00378_consen 161 ISAEEALELGLVDEVVPDEELDEEAL------------------------------------------------------ 186 (245)
T ss_dssp EEHHHHHHTTSSSEEESGGGHHHHHH------------------------------------------------------
T ss_pred chhHHHHhhcceeEEcCchhhhHHHH------------------------------------------------------
Confidence 99999999999999999988743222
Q ss_pred hhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 250 ESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 250 ~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.+++++..||.+++.+|+.+++.....+.+.++.|.+.+..++.++ |++||+++| +||
T Consensus 187 -------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~e~~~~f-~eK 245 (245)
T PF00378_consen 187 -------------ELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFKSE---DFQEGIAAF-LEK 245 (245)
T ss_dssp -------------HHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSH---HHHHHHHHH-HTT
T ss_pred -------------HHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCH---HHHHHHHHH-hCc
Confidence 23789999999999999999999988899999999999999999755 999999999 487
|
Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A .... |
| >PRK07938 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-50 Score=378.65 Aligned_cols=240 Identities=20% Similarity=0.278 Sum_probs=210.2
Q ss_pred EEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--hHHHHHHHH
Q 017189 14 EETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--AKFFSKEFI 91 (375)
Q Consensus 14 ~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--~~~~~~~~~ 91 (375)
+++++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..+......
T Consensus 7 ~~~~~v~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 85 (249)
T PRK07938 7 TPEPGIAEVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQATPGFTALIDANRGCFA 85 (249)
T ss_pred ccCCCEEEEEECCCCc-ccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhccchhHHHHHHHHHHH
Confidence 4578999999999985 9999999999999999999999999999999999999999999875422111 122334456
Q ss_pred HHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCcc
Q 017189 92 LNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARL 170 (375)
Q Consensus 92 l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~i 170 (375)
++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++| ..+++|++||+.+
T Consensus 86 ~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg~~~ 162 (249)
T PRK07938 86 AFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTAATI 162 (249)
T ss_pred HHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhCCcC
Confidence 7788999999999999999999999999999999999999999999999986 45678999999 5799999999999
Q ss_pred CHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHHh
Q 017189 171 DGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSALE 250 (375)
Q Consensus 171 ~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L~ 250 (375)
+|+||+++|||+++||++++.. .+.
T Consensus 163 ~a~eA~~~Glv~~vv~~~~l~~--~a~----------------------------------------------------- 187 (249)
T PRK07938 163 TAAELHHFGSVEEVVPRDQLDE--AAL----------------------------------------------------- 187 (249)
T ss_pred CHHHHHHCCCccEEeCHHHHHH--HHH-----------------------------------------------------
Confidence 9999999999999999877633 222
Q ss_pred hcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCCCC
Q 017189 251 SESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNP 329 (375)
Q Consensus 251 ~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~P 329 (375)
+.+++|+..||.+++.+|+.++.....++.+.++.|...+..++.++ |++||+++| .+| |+|
T Consensus 188 ------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---d~~eg~~af-~ek-r~p 249 (249)
T PRK07938 188 ------------EVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNLAG---VSDEHRDAF-VEK-RKA 249 (249)
T ss_pred ------------HHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCc---cHHHHHHHH-Hhc-CCC
Confidence 23789999999999999999998877889999999999988888655 999999999 598 666
|
|
| >PRK08321 naphthoate synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-50 Score=385.44 Aligned_cols=254 Identities=21% Similarity=0.325 Sum_probs=215.8
Q ss_pred CCcEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-------CCccccCCchhHhhc
Q 017189 8 EDQVLEEE--TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-------RAFCAGGDVAAVVRG 78 (375)
Q Consensus 8 ~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-------~~F~aG~Dl~~~~~~ 78 (375)
+..|.+++ +++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++...
T Consensus 22 ~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~ 101 (302)
T PRK08321 22 FTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRD 101 (302)
T ss_pred ceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccc
Confidence 55788888 899999999999999999999999999999999999999999999998 599999999875321
Q ss_pred c------c--h--h-hHHH-HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEe-CCeEEeccccccCCCCC
Q 017189 79 I------N--E--G-AKFF-SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT-ENSVFAMPETALGLFPD 145 (375)
Q Consensus 79 ~------~--~--~-~~~~-~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~-~~a~f~~pe~~~G~~p~ 145 (375)
. . . . .... .....+...+..+||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~ 181 (302)
T PRK08321 102 GYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDG 181 (302)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCC
Confidence 0 0 0 0 0111 112345667889999999999999999999999999999999 69999999999999999
Q ss_pred ccHHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcc
Q 017189 146 IGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDH 224 (375)
Q Consensus 146 ~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (375)
+|++++|+|++| ..+++|++||+.++|+||+++|||+++||++++.. ++.
T Consensus 182 ~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~--~a~--------------------------- 232 (302)
T PRK08321 182 GYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELET--EAL--------------------------- 232 (302)
T ss_pred chHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHHH--HHH---------------------------
Confidence 999999999999 57999999999999999999999999999887743 222
Q ss_pred hhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHH
Q 017189 225 SAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCH 304 (375)
Q Consensus 225 ~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~ 304 (375)
+.+++|++.||.+++.+|++++.... .+.+....|...+..
T Consensus 233 --------------------------------------~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~ 273 (302)
T PRK08321 233 --------------------------------------EWAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRL 273 (302)
T ss_pred --------------------------------------HHHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHH
Confidence 23789999999999999999987654 344455568888888
Q ss_pred HhhCCCcchHHhhHhhhhccCCCCCCCCCC
Q 017189 305 VMMGEVSKDFFEGCRAILLDKDKNPKWKPS 334 (375)
Q Consensus 305 ~~~~~~s~d~~egv~A~l~ek~r~P~w~~~ 334 (375)
++.++ |++||+++| ++| |+|.|+..
T Consensus 274 ~~~~~---d~~egi~af-~ek-r~p~~~~~ 298 (302)
T PRK08321 274 AYMTD---EAQEGRDAF-LEK-RDPDWSDF 298 (302)
T ss_pred HhcCH---HHHHHHHHH-hcc-CCCCCCCC
Confidence 88654 999999999 598 88999763
|
|
| >PRK06190 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-49 Score=373.46 Aligned_cols=234 Identities=27% Similarity=0.337 Sum_probs=210.7
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
+++.|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++......... .
T Consensus 2 ~~~~v~~~~~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~-~ 80 (258)
T PRK06190 2 TEPILLVETHDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGDGSAYGA-Q 80 (258)
T ss_pred CCceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhhH-H
Confidence 456799999999999999999999999999999999999999999999999999999999999999988643221111 2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| ..+++|++
T Consensus 81 ~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l 160 (258)
T PRK06190 81 DALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSL 160 (258)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHH
Confidence 34456788899999999999999999999999999999999999999999999999999999999999999 57999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||++++|+||+++||||+++|++++.+ .++
T Consensus 161 tg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------ 190 (258)
T PRK06190 161 TGDFLDAADALRAGLVTEVVPHDELLP--RAR------------------------------------------------ 190 (258)
T ss_pred hCCccCHHHHHHcCCCeEecCHhHHHH--HHH------------------------------------------------
Confidence 999999999999999999999877633 322
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMG 308 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~ 308 (375)
+.+++|++.||.+++.+|++++.....++.++++.|...+..++.+
T Consensus 191 -----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s 236 (258)
T PRK06190 191 -----------------RLAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNRS 236 (258)
T ss_pred -----------------HHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHcC
Confidence 2378999999999999999999988889999999999999999876
|
|
| >PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=372.27 Aligned_cols=243 Identities=21% Similarity=0.288 Sum_probs=218.7
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
.+..+.++.+++|++|+||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++.........+.
T Consensus 3 ~~~~~~~~~~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK07110 3 MKVVELREVEEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQTGKGTFT 82 (249)
T ss_pred CCceEEEEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhccchhhhHh
Confidence 45678899999999999999999999999999999999999999999999999999999999999998754322112222
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
. ..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++| ..++++++
T Consensus 83 -~-~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~~lll 160 (249)
T PRK07110 83 -E-ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQEMLL 160 (249)
T ss_pred -h-HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHHHHHHH
Confidence 2 56788899999999999999999999999999999999999999999999999999999999999999 57999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||++++|+||+++|||++||+++++.+ ++.
T Consensus 161 tg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------ 190 (249)
T PRK07110 161 TARYYRGAELKKRGVPFPVLPRAEVLE--KAL------------------------------------------------ 190 (249)
T ss_pred cCCccCHHHHHHcCCCeEEeChHHHHH--HHH------------------------------------------------
Confidence 999999999999999999999877632 332
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.++++++.||.+++.+|+.+++.....+.+.++.|...+..++.++ |++||++++
T Consensus 191 -----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---~~~egi~~~ 246 (249)
T PRK07110 191 -----------------ELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFHQP---EVKRRIESL 246 (249)
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhCCH---hHHHHHHHh
Confidence 23789999999999999999999888999999999999999999765 999999985
|
|
| >PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-50 Score=378.42 Aligned_cols=247 Identities=19% Similarity=0.266 Sum_probs=217.0
Q ss_pred CCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC--CCccccCCchhHhhccchh-
Q 017189 7 QEDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG--RAFCAGGDVAAVVRGINEG- 82 (375)
Q Consensus 7 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g--~~F~aG~Dl~~~~~~~~~~- 82 (375)
..+.|.+++ .++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|.|++++.......
T Consensus 9 ~~~~i~~~~~~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~~~~~~ 87 (278)
T PLN03214 9 ATPGVRVDRRPGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAPKTSAA 87 (278)
T ss_pred CCCceEEEEcCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhccccchH
Confidence 356899998 6999999999985 6999999999999999999999999999999998 6999999999875321111
Q ss_pred --hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCC-CCCccHHHHHhhcch-H
Q 017189 83 --AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGL-FPDIGASYFLSRLPG-F 158 (375)
Q Consensus 83 --~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~-~p~~g~~~~l~rl~g-~ 158 (375)
..+......++.++.++||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|++++|+|++| .
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~G~~ 167 (278)
T PLN03214 88 RYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVIDRK 167 (278)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhcCHH
Confidence 223333345778899999999999999999999999999999999999999999999999 599999999999999 6
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
++++|++||+.++|+||+++||||++||++++.+ .++
T Consensus 168 ~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~----------------------------------------- 204 (278)
T PLN03214 168 VAESLLLRGRLVRPAEAKQLGLIDEVVPAAALME--AAA----------------------------------------- 204 (278)
T ss_pred HHHHHHHcCCccCHHHHHHcCCCcEecChHHHHH--HHH-----------------------------------------
Confidence 7999999999999999999999999999877633 222
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhH
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGC 318 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv 318 (375)
+.+++|++.||.+++.+|++++......++++++.|...+..++.+ +|++||+
T Consensus 205 ------------------------~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s---~d~~egi 257 (278)
T PLN03214 205 ------------------------SAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKMLSE---PSIIKAL 257 (278)
T ss_pred ------------------------HHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCC---HHHHHHH
Confidence 2378999999999999999999888888999999999988888865 4999999
Q ss_pred hhhhccC
Q 017189 319 RAILLDK 325 (375)
Q Consensus 319 ~A~l~ek 325 (375)
++|+ ||
T Consensus 258 ~afl-ek 263 (278)
T PLN03214 258 GGVM-ER 263 (278)
T ss_pred HHHH-HH
Confidence 9994 86
|
|
| >TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-48 Score=395.79 Aligned_cols=253 Identities=13% Similarity=0.102 Sum_probs=220.4
Q ss_pred EEEEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHhhc-CCCceEEEEeeCCCC-ccccCCchhH
Q 017189 11 VLEEETSFVRILTLNRPRQL-------------NALSAQMISRLLELFQRYET-DSNVKLLILKGKGRA-FCAGGDVAAV 75 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~-------------Nal~~~~~~eL~~~l~~~~~-d~~vr~vVltg~g~~-F~aG~Dl~~~ 75 (375)
+.++++++|++||||||++. |+||.+|+.+|.+++.+++. |+++|+|||||.|+. ||+|+|++..
T Consensus 260 v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~ 339 (546)
T TIGR03222 260 VAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLE 339 (546)
T ss_pred EEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCcccc
Confidence 45566899999999999999 99999999999999999984 599999999999977 9999999843
Q ss_pred hhccchh-hHHHHHHHHHHHHHHhCCCcEEEEE-ccccchhh-hhhhhcCCEEEE-------eCCeEEeccccccCCCCC
Q 017189 76 VRGINEG-AKFFSKEFILNYLMATYTKPQVSIL-NGIVMGGG-AGVSIHGRFRVA-------TENSVFAMPETALGLFPD 145 (375)
Q Consensus 76 ~~~~~~~-~~~~~~~~~l~~~i~~~~kPvIAav-nG~a~GgG-~~Lala~D~ria-------~~~a~f~~pe~~~G~~p~ 145 (375)
....... ........+++.+|..+||||||+| ||+|+||| ++|+++||+||| +++++|++||+++|++|+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lGl~p~ 419 (546)
T TIGR03222 340 AHKDHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFGLYPM 419 (546)
T ss_pred ccccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccccCCC
Confidence 2111111 2222334457788999999999999 89999999 999999999999 899999999999999999
Q ss_pred ccHHHHHhhcc-h-HHH--HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCC
Q 017189 146 IGASYFLSRLP-G-FFG--EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYL 221 (375)
Q Consensus 146 ~g~~~~l~rl~-g-~~a--~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 221 (375)
+|++++|+|++ | .++ +++++||+.|+|+||+++|||++++|++++.+ ++.
T Consensus 420 ~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~~Glv~~vv~~~~l~~--~a~------------------------ 473 (546)
T TIGR03222 420 VNGLSRLATRFYAEPAPVAAVRDKIGQALDAEEAERLGLVTAAPDDIDWED--EIR------------------------ 473 (546)
T ss_pred cCcHHHHHHHhcCchhHHHHHHHHhCCCCCHHHHHHcCCcccccCchHHHH--HHH------------------------
Confidence 99999999998 8 567 56999999999999999999999999988743 222
Q ss_pred CcchhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHH-HHHHHH
Q 017189 222 KDHSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQC-LIREYR 300 (375)
Q Consensus 222 ~~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~-l~~e~~ 300 (375)
+++++|++.||.+++.+|++++.....+++++ +..|..
T Consensus 474 -----------------------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~ 512 (546)
T TIGR03222 474 -----------------------------------------IALEERASFSPDALTGLEANLRFAGPETMETRIFGRLTA 512 (546)
T ss_pred -----------------------------------------HHHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHHHHHH
Confidence 23789999999999999999999999999999 999999
Q ss_pred HHHHHhhCCCcchHHh---hHhhhhccCCCCCCCCCCC
Q 017189 301 MVCHVMMGEVSKDFFE---GCRAILLDKDKNPKWKPSK 335 (375)
Q Consensus 301 ~~~~~~~~~~s~d~~e---gv~A~l~ek~r~P~w~~~~ 335 (375)
.+..++.++ |.+| |++|| .|| |+|+|+-.+
T Consensus 513 ~~~~~~~~~---d~~e~~~g~~af-~ek-r~p~f~~~~ 545 (546)
T TIGR03222 513 WQNWIFNRP---NAVGENGALKVY-GSG-KKAQFDMER 545 (546)
T ss_pred HHHHHhcCC---cccchhhHHHHH-ccC-CCCCCCccC
Confidence 999999765 9999 99999 599 899998544
|
In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH. |
| >PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-48 Score=396.08 Aligned_cols=256 Identities=13% Similarity=0.082 Sum_probs=220.6
Q ss_pred CCcEE--EEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHhhc-CCCceEEEEeeCC-CCccccC
Q 017189 8 EDQVL--EEETSFVRILTLNRPRQL-------------NALSAQMISRLLELFQRYET-DSNVKLLILKGKG-RAFCAGG 70 (375)
Q Consensus 8 ~~~v~--~~~~~~v~~itlnrp~~~-------------Nal~~~~~~eL~~~l~~~~~-d~~vr~vVltg~g-~~F~aG~ 70 (375)
|.++. ++++++|++||||||++. |+||.+|+.+|.+++..++. |+++|+|||||+| ++||+|+
T Consensus 259 ~~~~~v~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~ 338 (550)
T PRK08184 259 YRHVDVEIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAA 338 (550)
T ss_pred eEEEEEEEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCC
Confidence 44444 455699999999999988 68999999999999999996 7999999999999 5999999
Q ss_pred CchhHhhccchh-hHHHHHHHHHHHHHHhCCCcEEEEEc-cccchhh-hhhhhcCCEEEEe-------CCeEEecccccc
Q 017189 71 DVAAVVRGINEG-AKFFSKEFILNYLMATYTKPQVSILN-GIVMGGG-AGVSIHGRFRVAT-------ENSVFAMPETAL 140 (375)
Q Consensus 71 Dl~~~~~~~~~~-~~~~~~~~~l~~~i~~~~kPvIAavn-G~a~GgG-~~Lala~D~ria~-------~~a~f~~pe~~~ 140 (375)
|++......... .........++.+|..+||||||+|| |+|+||| ++|+++||+|||+ ++++|++||+++
T Consensus 339 Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~pe~~~ 418 (550)
T PRK08184 339 DATLLAHKDHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLSALNF 418 (550)
T ss_pred ChhhhcccchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECccccc
Confidence 987432111101 22233445577889999999999997 9999999 9999999999999 999999999999
Q ss_pred CCCCCccHHHHHhhc-ch-HHHHHH--hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhc
Q 017189 141 GLFPDIGASYFLSRL-PG-FFGEYV--GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFS 216 (375)
Q Consensus 141 G~~p~~g~~~~l~rl-~g-~~a~~l--~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 216 (375)
|++|++|++++|+|+ +| .+++++ ++||++++|+||+++||||++||++++.+ ++.
T Consensus 419 Gl~p~~gg~~~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~--~a~------------------- 477 (550)
T PRK08184 419 GLYPMVNGLSRLARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWED--EVR------------------- 477 (550)
T ss_pred cCCCCCCcHHHhHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHH--HHH-------------------
Confidence 999999999999988 69 668776 59999999999999999999999988743 222
Q ss_pred cCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHH-H
Q 017189 217 LEPYLKDHSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQC-L 295 (375)
Q Consensus 217 ~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~-l 295 (375)
+++++|++.||.+++.+|++++.....+++++ +
T Consensus 478 ----------------------------------------------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~ 511 (550)
T PRK08184 478 ----------------------------------------------IALEERASLSPDALTGMEANLRFAGPETMETRIF 511 (550)
T ss_pred ----------------------------------------------HHHHHHHhCCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 23799999999999999999999999999999 9
Q ss_pred HHHHHHHHHHhhCCCcchHHh---hHhhhhccCCCCCCCCCCC
Q 017189 296 IREYRMVCHVMMGEVSKDFFE---GCRAILLDKDKNPKWKPSK 335 (375)
Q Consensus 296 ~~e~~~~~~~~~~~~s~d~~e---gv~A~l~ek~r~P~w~~~~ 335 (375)
..|...+..++.++ |.+| |++|| .|| |+|+|++.+
T Consensus 512 ~~e~~~~~~~~~~~---d~~e~~~g~~af-~ek-r~~~f~~~~ 549 (550)
T PRK08184 512 GRLTAWQNWIFQRP---NAVGEKGALKVY-GTG-QKAQFDWNR 549 (550)
T ss_pred HHHHHHHHHHhcCC---cccccchHHHHh-ccC-CCCCCCCCC
Confidence 99999999999765 9999 99999 599 899998765
|
|
| >PRK05869 enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-47 Score=347.37 Aligned_cols=212 Identities=22% Similarity=0.259 Sum_probs=186.8
Q ss_pred CCcEEEEEe-----CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh
Q 017189 8 EDQVLEEET-----SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG 82 (375)
Q Consensus 8 ~~~v~~~~~-----~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~ 82 (375)
++.|.++.. ++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 2 ~~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~ 80 (222)
T PRK05869 2 NEFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLSAQE 80 (222)
T ss_pred ccchhhhcccCcccCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccChhh
Confidence 345666555 8999999999985 9999999999999999999999999999999999999999999875432221
Q ss_pred -hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 83 -AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 83 -~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
..+...+.+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| ..+
T Consensus 81 ~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a 160 (222)
T PRK05869 81 ADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGPSRA 160 (222)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCHHHH
Confidence 223344567888999999999999999999999999999999999999999999999999999999999999999 579
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
+++++||++++|+||+++||||+++|++++.. ++.
T Consensus 161 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------- 195 (222)
T PRK05869 161 KELVFSGRFFDAEEALALGLIDEMVAPDDVYD--AAA------------------------------------------- 195 (222)
T ss_pred HHHHHcCCCcCHHHHHHCCCCCEeeCchHHHH--HHH-------------------------------------------
Confidence 99999999999999999999999999887633 222
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGR 287 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~ 287 (375)
+.+++|+..+|.+++.+|++++...
T Consensus 196 ----------------------~~a~~ia~~~~~a~~~~K~~~~~~~ 220 (222)
T PRK05869 196 ----------------------AWARRFLDGPPHALAAAKAGISDVY 220 (222)
T ss_pred ----------------------HHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 3378999999999999999998754
|
|
| >PRK08290 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-46 Score=357.18 Aligned_cols=231 Identities=22% Similarity=0.322 Sum_probs=200.3
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc------
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN------ 80 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------ 80 (375)
+++.|.++.+++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 2 ~~~~v~~~~~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~ 81 (288)
T PRK08290 2 EYEYVRYEVAGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPD 81 (288)
T ss_pred CCceEEEEeeCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCccccccccccccccc
Confidence 46679999999999999999999999999999999999999999999999999999999999999998632110
Q ss_pred ------------h--hhH---HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCC
Q 017189 81 ------------E--GAK---FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLF 143 (375)
Q Consensus 81 ------------~--~~~---~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~ 143 (375)
. ... ....+..++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl- 160 (288)
T PRK08290 82 QHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI- 160 (288)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-
Confidence 0 001 1223456677889999999999999999999999999999999999999999999998
Q ss_pred CCccHHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCC
Q 017189 144 PDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLK 222 (375)
Q Consensus 144 p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (375)
|+ ++++++++++| ..+++|++||+.++|+||+++||||++||++++.....
T Consensus 161 ~~-~~~~~l~~~iG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~--------------------------- 212 (288)
T PRK08290 161 PG-VEYFAHPWELGPRKAKELLFTGDRLTADEAHRLGMVNRVVPRDELEAETL--------------------------- 212 (288)
T ss_pred Cc-chHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHH---------------------------
Confidence 54 45677899999 57999999999999999999999999999877643222
Q ss_pred cchhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcC-CHHHHHHHHHHH
Q 017189 223 DHSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQ-GVGQCLIREYRM 301 (375)
Q Consensus 223 ~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~-~l~~~l~~e~~~ 301 (375)
+.+++|++.||.+++.+|+++++.... .++++++.|...
T Consensus 213 ----------------------------------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~ 252 (288)
T PRK08290 213 ----------------------------------------ELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDL 252 (288)
T ss_pred ----------------------------------------HHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 337899999999999999999987664 799999999999
Q ss_pred HHHHh
Q 017189 302 VCHVM 306 (375)
Q Consensus 302 ~~~~~ 306 (375)
....+
T Consensus 253 ~~~~~ 257 (288)
T PRK08290 253 HQLGH 257 (288)
T ss_pred HHHcc
Confidence 88877
|
|
| >PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=387.94 Aligned_cols=283 Identities=20% Similarity=0.239 Sum_probs=218.5
Q ss_pred cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc--ch--hhH
Q 017189 10 QVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI--NE--GAK 84 (375)
Q Consensus 10 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~--~~~ 84 (375)
.+.++. +++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||+|++||+|+|++++.... .. ...
T Consensus 7 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~ 86 (715)
T PRK11730 7 TLQVDWLEDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFAAPEEELSQ 86 (715)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhccCCHHHHHH
Confidence 577874 7999999999999999999999999999999999999999999999999999999999875421 11 124
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+.....+++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| ..+++|
T Consensus 87 ~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~l 166 (715)
T PRK11730 87 WLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALEW 166 (715)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHHH
Confidence 4455667888899999999999999999999999999999999999999999999999999999999999999 679999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHh-cCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYK-VNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
++||++++|+||+++||||++||++++.....++.+ +... + ..+.... .+....... +.+++++.....
T Consensus 167 lltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~-~------~~~~~~~-~~~~~p~a~--~~~~~~~~~~~~ 236 (715)
T PRK11730 167 IAAGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIAG-K------LDWKARR-QPKLEPLKL--SKIEAMMSFTTA 236 (715)
T ss_pred HHcCCcCCHHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhc-C------Ccccccc-Ccccccccc--cchhHHHHHHHH
Confidence 999999999999999999999999887443333321 1000 0 0000000 000000000 001111111111
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+. .+.++..+..|.++ .++++++.....+++++++.|.+.+..++.++ |++||+++|+
T Consensus 237 k~------------------~~~~~~~~~~pa~~-~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~---d~~egi~aF~ 294 (715)
T PRK11730 237 KG------------------MVAQKAGKHYPAPM-TAVKTIEAAAGLGRDEALELEAKGFVKLAKTN---VARALVGIFL 294 (715)
T ss_pred HH------------------HHHHhhccCCccHH-HHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHH
Confidence 11 11245566777776 66778998888899999999999999999754 9999999996
Q ss_pred ccC
Q 017189 323 LDK 325 (375)
Q Consensus 323 ~ek 325 (375)
++
T Consensus 295 -~~ 296 (715)
T PRK11730 295 -ND 296 (715)
T ss_pred -HH
Confidence 65
|
|
| >KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-46 Score=326.00 Aligned_cols=255 Identities=24% Similarity=0.392 Sum_probs=229.2
Q ss_pred cEEEEE----eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-h
Q 017189 10 QVLEEE----TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-A 83 (375)
Q Consensus 10 ~v~~~~----~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~ 83 (375)
.|.+++ +.||.+|-+|||.+.|+|+.-|+++|.++++.+..|+.+|+|+|++.- +.||+|+||++-....... .
T Consensus 28 Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~Ms~~Ev~ 107 (291)
T KOG1679|consen 28 EVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTMSPSEVT 107 (291)
T ss_pred eeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcCCHHHHH
Confidence 455544 569999999999999999999999999999999999999999999876 9999999999986655544 6
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.|...+..++..|.++|.||||+|+|.|+|||++|+|+||+|+|+++++|+++|++++++|+.|++++|+|++| ..+++
T Consensus 108 ~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~alaKE 187 (291)
T KOG1679|consen 108 RFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVALAKE 187 (291)
T ss_pred HHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHHHHHh
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccH-HH-HHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRL-AL-LEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l-~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
|++||+.+++.||..+||||++|...+- +. ..+++
T Consensus 188 LIftarvl~g~eA~~lGlVnhvv~qneegdaa~~kal------------------------------------------- 224 (291)
T KOG1679|consen 188 LIFTARVLNGAEAAKLGLVNHVVEQNEEGDAAYQKAL------------------------------------------- 224 (291)
T ss_pred HhhhheeccchhHHhcchHHHHHhcCccccHHHHHHH-------------------------------------------
Confidence 9999999999999999999999987542 11 11122
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+++++|.-+-|.++++.|..++.+....+..++..|..-+.+.+.+ +|..||+.|
T Consensus 225 ----------------------~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i~t---~drLeglaa 279 (291)
T KOG1679|consen 225 ----------------------ELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQIIPT---KDRLEGLAA 279 (291)
T ss_pred ----------------------HHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcCcH---HHHHHHHHH
Confidence 4589999999999999999999999999999999999988888865 499999999
Q ss_pred hhccCCCCCCCCCC
Q 017189 321 ILLDKDKNPKWKPS 334 (375)
Q Consensus 321 ~l~ek~r~P~w~~~ 334 (375)
| .|| |.|.|+++
T Consensus 280 f-~ek-r~p~y~G~ 291 (291)
T KOG1679|consen 280 F-KEK-RKPEYKGE 291 (291)
T ss_pred H-Hhh-cCCCcCCC
Confidence 9 699 89999863
|
|
| >PRK08272 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-45 Score=350.54 Aligned_cols=214 Identities=23% Similarity=0.326 Sum_probs=185.2
Q ss_pred CCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch---
Q 017189 5 QSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE--- 81 (375)
Q Consensus 5 ~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--- 81 (375)
..+++.|.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||||.|++||+|.|++++......
T Consensus 6 ~~~~~~v~~e~~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~ 85 (302)
T PRK08272 6 LDNLKTMTYEVTGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGG 85 (302)
T ss_pred cCCCCeEEEEeECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhccccccc
Confidence 34578899999999999999999999999999999999999999999999999999999999999999987542210
Q ss_pred -------------------h----hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecccc
Q 017189 82 -------------------G----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET 138 (375)
Q Consensus 82 -------------------~----~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~ 138 (375)
. ..+.....+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~ 165 (302)
T PRK08272 86 GGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPT 165 (302)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcch
Confidence 0 01234455677889999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccHHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhcc
Q 017189 139 ALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSL 217 (375)
Q Consensus 139 ~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 217 (375)
++|.+|+. ..+++++| .++++|++||++|+|+||+++||||++||++++.....
T Consensus 166 ~~gg~~~~---~~~~~~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~---------------------- 220 (302)
T PRK08272 166 RVWGVPAT---GMWAYRLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERTE---------------------- 220 (302)
T ss_pred hcccCChH---HHHHHHhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHHHHHHHHH----------------------
Confidence 98666643 35677889 67999999999999999999999999999887643222
Q ss_pred CCCCCcchhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc
Q 017189 218 EPYLKDHSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL 288 (375)
Q Consensus 218 ~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~ 288 (375)
+.+++|++.||.+++.+|++++....
T Consensus 221 ---------------------------------------------~la~~ia~~~~~a~~~~K~~l~~~~~ 246 (302)
T PRK08272 221 ---------------------------------------------RLVERIAAVPVNQLAMVKLAVNSALL 246 (302)
T ss_pred ---------------------------------------------HHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 23789999999999999999988754
|
|
| >PRK08788 enoyl-CoA hydratase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=342.81 Aligned_cols=242 Identities=18% Similarity=0.227 Sum_probs=200.8
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhc-----CCCceEEEEeeC-CCCccccCCchhHhhcc--ch
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYET-----DSNVKLLILKGK-GRAFCAGGDVAAVVRGI--NE 81 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~-----d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~--~~ 81 (375)
.|.++.+++|++|||| |++.|+||.+|+.+|.+++++++. |+++|+|||||. |+.||+|.|++++.... .+
T Consensus 18 ~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~~~~~~~ 96 (287)
T PRK08788 18 RVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAELIRAGD 96 (287)
T ss_pred EEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhhhccccc
Confidence 3566678999999996 999999999999999999999998 899999999999 69999999999875321 11
Q ss_pred hh---HHHHHHHHHHHHHH---hCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhc
Q 017189 82 GA---KFFSKEFILNYLMA---TYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRL 155 (375)
Q Consensus 82 ~~---~~~~~~~~l~~~i~---~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl 155 (375)
.. .+...+...+.++. .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++++
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~~~~l~~~ 176 (287)
T PRK08788 97 RDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGAYSFLARR 176 (287)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchHHHHHHHH
Confidence 11 12222233334343 7999999999999999999999999999999999999999999999999999999999
Q ss_pred ch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHH
Q 017189 156 PG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVID 234 (375)
Q Consensus 156 ~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 234 (375)
+| .++++|++||+.++|+||+++||||++||++++.+ ++.
T Consensus 177 vG~~~A~ellltG~~l~A~eA~~~GLV~~vv~~~el~~--~a~------------------------------------- 217 (287)
T PRK08788 177 VGPKLAEELILSGKLYTAEELHDMGLVDVLVEDGQGEA--AVR------------------------------------- 217 (287)
T ss_pred hhHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchHHHH--HHH-------------------------------------
Confidence 99 67999999999999999999999999999887633 222
Q ss_pred HHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchH
Q 017189 235 KCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDF 314 (375)
Q Consensus 235 ~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~ 314 (375)
+.+++|++. |.+...+|+..+.....++.+.++.|......+++.. +.-
T Consensus 218 ----------------------------~~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 266 (287)
T PRK08788 218 ----------------------------TFIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQLE--EKD 266 (287)
T ss_pred ----------------------------HHHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhhcc--ccc
Confidence 226788877 8888888888777767789999999887777766643 566
Q ss_pred HhhHhhhh
Q 017189 315 FEGCRAIL 322 (375)
Q Consensus 315 ~egv~A~l 322 (375)
.+-+.+|.
T Consensus 267 ~~~~~~~~ 274 (287)
T PRK08788 267 LRTMERLV 274 (287)
T ss_pred HHHHHHHH
Confidence 77788873
|
|
| >PRK06213 enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-45 Score=337.90 Aligned_cols=224 Identities=18% Similarity=0.216 Sum_probs=196.0
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSK 88 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 88 (375)
+.|.++.+++|++||||||+ .|++|.+|+.+|.++++.++ +++++|||||.|++||+|.|++++.........+...
T Consensus 3 ~~i~~~~~~~v~~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~~~~~~~~~~~ 79 (229)
T PRK06213 3 ELVSYTLEDGVATITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSGAQAAIALLTA 79 (229)
T ss_pred ceEEEEecCCEEEEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcchHhHHHHHHH
Confidence 35889999999999999985 69999999999999999988 4579999999999999999999876432111345556
Q ss_pred HHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 89 EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 89 ~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
..+++.++..+||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|+.|+.+++++.+| ..++++++|
T Consensus 80 ~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~~lll~ 159 (229)
T PRK06213 80 GSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQRAVIN 159 (229)
T ss_pred HHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHHHHHHc
Confidence 677888999999999999999999999999999999999999 999999999999988888888888888 568999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|++++|+||+++||||+++|++++.. .+.
T Consensus 160 g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------- 188 (229)
T PRK06213 160 AEMFDPEEAVAAGFLDEVVPPEQLLA--RAQ------------------------------------------------- 188 (229)
T ss_pred CcccCHHHHHHCCCceeccChHHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999877633 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMV 302 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~ 302 (375)
+.++++++.||.+++.+|++++......+.++++.|.+.+
T Consensus 189 ----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~ 228 (229)
T PRK06213 189 ----------------AAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAAEF 228 (229)
T ss_pred ----------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhhhc
Confidence 3378999999999999999999887778888888887653
|
|
| >TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-44 Score=342.04 Aligned_cols=269 Identities=19% Similarity=0.294 Sum_probs=208.2
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccc----hhhHHHHHHHHHH
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN----EGAKFFSKEFILN 93 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~----~~~~~~~~~~~l~ 93 (375)
+++|+||||+++|++|.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++..... ....+...+.+++
T Consensus 38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~~~~~~~~~~~~~~~~l~ 117 (360)
T TIGR03200 38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYAGNPQEYRQYMRLFNDMV 117 (360)
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcccChhHHHHHHHHHHHHH
Confidence 355999999999999999999999999999999999999999999 79999999998764211 1123444456778
Q ss_pred HHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCccCH
Q 017189 94 YLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDG 172 (375)
Q Consensus 94 ~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A 172 (375)
..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .+++++++||++++|
T Consensus 118 ~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~sA 197 (360)
T TIGR03200 118 SAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWSA 197 (360)
T ss_pred HHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCcH
Confidence 8899999999999999999999999999999999999999999999999999999999999999 679999999999999
Q ss_pred HHHHHcCccceecCCccH------------HHHHHHHHhcCCCCh---HHHHHHHHHhccCCCCCcchhhhHHHHHHHH-
Q 017189 173 AEMRACGLATHFVPSSRL------------ALLEEALYKVNSSDP---AVISAVIDKFSLEPYLKDHSAYHWMDVIDKC- 236 (375)
Q Consensus 173 ~eA~~~GLv~~vv~~~~l------------~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~- 236 (375)
++|+++|||+++||+.++ +...+.+.++..+.+ ++++.... .+.++
T Consensus 198 ~EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~------------------~~~~~~ 259 (360)
T TIGR03200 198 HKAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKE------------------LIKQGT 259 (360)
T ss_pred HHHHHcCChheecCchhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHH------------------HHhccc
Confidence 999999999999998776 222222222111111 11111111 11100
Q ss_pred hCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHh
Q 017189 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFE 316 (375)
Q Consensus 237 f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 316 (375)
-...-+ ++-..+++.++....|.++.-+++-+|..........-..-...+..-+. -+..+
T Consensus 260 ~~~~~l---------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 320 (360)
T TIGR03200 260 IDLSLL---------------DEAVEALCAKLLNTFPECLTKSIEELRKPKLFAWNQNKENSRAWLALNMM----NEART 320 (360)
T ss_pred chHhHH---------------HHHHHHHHHHHHHhchHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHhhcc----cccch
Confidence 000001 11222356788999999999999999988777776666666666655543 38999
Q ss_pred hHhhhhccC
Q 017189 317 GCRAILLDK 325 (375)
Q Consensus 317 gv~A~l~ek 325 (375)
|++|| .++
T Consensus 321 ~~~~~-~~~ 328 (360)
T TIGR03200 321 GFRAF-NEG 328 (360)
T ss_pred hhHHH-hcc
Confidence 99999 675
|
Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-44 Score=376.34 Aligned_cols=279 Identities=19% Similarity=0.262 Sum_probs=214.9
Q ss_pred cEEEEE-eCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh--hH
Q 017189 10 QVLEEE-TSFVRILTLNRP-RQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG--AK 84 (375)
Q Consensus 10 ~v~~~~-~~~v~~itlnrp-~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~--~~ 84 (375)
.+.+++ +++|++|||||| ++.|+||.+|+.+|.++++.++.|+++|+|||+|.+ ++||+|+|++++....... ..
T Consensus 6 ~~~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~~~~~~~~ 85 (708)
T PRK11154 6 AFTLNVREDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACKTAQEAEA 85 (708)
T ss_pred eEEEEEcCCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccCCHHHHHH
Confidence 466777 789999999999 689999999999999999999999999999999976 8999999999875432111 23
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC--eEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN--SVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
+......++.+|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++| .+++
T Consensus 86 ~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~~A~ 165 (708)
T PRK11154 86 LARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTAL 165 (708)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHHHHH
Confidence 4445566888999999999999999999999999999999999996 599999999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||++++|+||+++||||++|+++++.+...++.+.. ... .. ...... +.-+...
T Consensus 166 ~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~-------------~~~--~~-~~~~~~------~~~~~~p 223 (708)
T PRK11154 166 DMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKG-------------KPA--RR-PLPVRE------RLLEGNP 223 (708)
T ss_pred HHHHhCCcCCHHHHHHCCCCcEecChHHHHHHHHHHHHhc-------------CCc--cC-cCCchh------hhcccCc
Confidence 9999999999999999999999999988744333332110 000 00 000000 0000000
Q ss_pred H--HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 242 V--EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 242 ~--~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
. ..+++ .+.+.+++-.+..-.++..+|++++.+...++.+++..|.+.+..++.++ |+++|++
T Consensus 224 ~~~~~~~~------------~~~~~~~~~~~g~~~A~~~~k~~i~~~~~~~~~~~l~~E~~~~~~~~~s~---~~~~~~~ 288 (708)
T PRK11154 224 LGRALLFK------------QARKKTLAKTQGNYPAPERILDVVRTGLEKGMSSGYEAEARAFGELAMTP---ESAALRS 288 (708)
T ss_pred hhHHHHHH------------HHHHHHHHhcccCChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHH
Confidence 0 00110 11111122222222589999999999988899999999999999999755 9999999
Q ss_pred hhhccC
Q 017189 320 AILLDK 325 (375)
Q Consensus 320 A~l~ek 325 (375)
+|+.++
T Consensus 289 aF~~~~ 294 (708)
T PRK11154 289 IFFATT 294 (708)
T ss_pred HHHHHH
Confidence 998665
|
|
| >KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-45 Score=319.72 Aligned_cols=255 Identities=22% Similarity=0.362 Sum_probs=220.3
Q ss_pred CCcEEEE---EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc---h
Q 017189 8 EDQVLEE---ETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN---E 81 (375)
Q Consensus 8 ~~~v~~~---~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~---~ 81 (375)
++.+.+. .+..|..+.||||.|.|+||..|+.|+.++++.+.+||++|+|||+|+|++||+|+|+..+..... +
T Consensus 18 ~ksl~v~vk~~~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~ 97 (292)
T KOG1681|consen 18 YKSLEVSVKSAQPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPE 97 (292)
T ss_pred cceeeeeecCCCCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccc
Confidence 4444444 356899999999999999999999999999999999999999999999999999999877654311 1
Q ss_pred h----------hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHH
Q 017189 82 G----------AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYF 151 (375)
Q Consensus 82 ~----------~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~ 151 (375)
+ +.+...+++.+..|.+||||||++|+|+|+|||+.|..+||+|+|+++|.|+.-|+.+|+..+.|...+
T Consensus 98 ~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~R 177 (292)
T KOG1681|consen 98 GDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNR 177 (292)
T ss_pred cchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhh
Confidence 1 445556778888999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhcch-H-HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhH
Q 017189 152 LSRLPG-F-FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHW 229 (375)
Q Consensus 152 l~rl~g-~-~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (375)
||..+| . .++++.+|++.++|.||++.|||.+|+|+.+-. +..++
T Consensus 178 lpkvVGn~s~~~elafTar~f~a~EAl~~GLvSrvf~dk~~l-l~~~l-------------------------------- 224 (292)
T KOG1681|consen 178 LPKVVGNQSLARELAFTARKFSADEALDSGLVSRVFPDKEEL-LNGAL-------------------------------- 224 (292)
T ss_pred hhHHhcchHHHHHHHhhhhhcchhhhhhcCcchhhcCCHHHH-HhhhH--------------------------------
Confidence 999999 4 599999999999999999999999999984321 22333
Q ss_pred HHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCC
Q 017189 230 MDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGE 309 (375)
Q Consensus 230 ~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~ 309 (375)
.+|+.|+.+||.++..||+.+....+.+.++.|.+-..+....+.
T Consensus 225 ---------------------------------~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L~-- 269 (292)
T KOG1681|consen 225 ---------------------------------PMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSMLL-- 269 (292)
T ss_pred ---------------------------------HHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHHH--
Confidence 458999999999999999999999999999999999888887775
Q ss_pred CcchHHhhHhhhhccCCCCCCCC
Q 017189 310 VSKDFFEGCRAILLDKDKNPKWK 332 (375)
Q Consensus 310 ~s~d~~egv~A~l~ek~r~P~w~ 332 (375)
|+|+.+.+.|-+ +|.+.+.|.
T Consensus 270 -s~Dl~~av~a~m-~k~k~~tfs 290 (292)
T KOG1681|consen 270 -SDDLVKAVMAQM-EKLKTVTFS 290 (292)
T ss_pred -HHHHHHHHHHHh-hcCCCCCcc
Confidence 459999999995 673333364
|
|
| >TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=371.12 Aligned_cols=275 Identities=22% Similarity=0.307 Sum_probs=212.5
Q ss_pred EEeCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEE-eeCCCCccccCCchhHhhccch-h-hHHHHHH
Q 017189 14 EETSFVRILTLNRP-RQLNALSAQMISRLLELFQRYETDSNVKLLIL-KGKGRAFCAGGDVAAVVRGINE-G-AKFFSKE 89 (375)
Q Consensus 14 ~~~~~v~~itlnrp-~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVl-tg~g~~F~aG~Dl~~~~~~~~~-~-~~~~~~~ 89 (375)
..+++|++|||||| ++.|+||.+|+.+|.++++.++.|+++|+||| +|.|++||+|+|++++...... . ..+....
T Consensus 6 ~~~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~~~~ 85 (699)
T TIGR02440 6 VREDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAACQTAGEAKALAQQG 85 (699)
T ss_pred EcCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhccCChhHHHHHHHHH
Confidence 45789999999999 68999999999999999999999999999997 6788999999999987542211 1 2334455
Q ss_pred HHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC--eEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 90 FILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN--SVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 90 ~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
..++.++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++| ..+++|++|
T Consensus 86 ~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~lllt 165 (699)
T TIGR02440 86 QVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMILT 165 (699)
T ss_pred HHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHHHHHc
Confidence 67888999999999999999999999999999999999986 799999999999999999999999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCc--CCHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSR--RTVEE 244 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~--~~~~e 244 (375)
|+.++|++|+++||||++||++++.....++.+.. .+ .....+... +.-+. .....
T Consensus 166 G~~~~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~--~~--------------~~~~~~~~~------~~~~~~~~a~~~ 223 (699)
T TIGR02440 166 GKQLRAKQALKLGLVDDVVPQSILLDTAVEMALKG--KP--------------IRKPLSLQE------RLLEGTPLGRAL 223 (699)
T ss_pred CCcCCHHHHHhCCCCcEecChhHHHHHHHHHHHhC--CC--------------CCCCccchh------hhcccCchhHHH
Confidence 99999999999999999999988754433332110 00 000000000 00000 00000
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
++ +++.+.+++-....-.+...+|++++.+...+++++++.|.+.+..++.++ |+++++++|+.+
T Consensus 224 ~~------------~~~~k~~~~~~~~~~~a~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~s~---~~~~~~~~f~~~ 288 (699)
T TIGR02440 224 LF------------DQAAKKTAKKTQGNYPAAERILDVVRQGLAQGMQKGLDAEARAFGELVMTP---ESAALRSIFFAT 288 (699)
T ss_pred HH------------HHHHHHHHHhcccCChhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCH---HHHHHHHHHHHH
Confidence 00 011111222223234578889999999999999999999999999999755 999999999876
Q ss_pred C
Q 017189 325 K 325 (375)
Q Consensus 325 k 325 (375)
+
T Consensus 289 ~ 289 (699)
T TIGR02440 289 T 289 (699)
T ss_pred H
Confidence 5
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog. |
| >TIGR02437 FadB fatty oxidation complex, alpha subunit FadB | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=363.60 Aligned_cols=284 Identities=18% Similarity=0.228 Sum_probs=217.5
Q ss_pred cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc--c-hh-hH
Q 017189 10 QVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI--N-EG-AK 84 (375)
Q Consensus 10 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~-~~-~~ 84 (375)
.+.++. +++|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.... . .. ..
T Consensus 7 ~i~~~~~~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 86 (714)
T TIGR02437 7 TIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFALPDAELIQ 86 (714)
T ss_pred eEEEEEccCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhcccCCHHHHHH
Confidence 677775 7899999999999999999999999999999999999999999999999999999999985421 1 11 23
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+.....+++.+|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| ..+++|
T Consensus 87 ~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~l 166 (714)
T TIGR02437 87 WLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALEW 166 (714)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHHH
Confidence 4445567888999999999999999999999999999999999999999999999999999999999999999 579999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhc-CCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKV-NSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
++||++++|++|+++||||+++|++++.....++.+. .... ..+.... ........ .+.+.+++..+..
T Consensus 167 lltG~~~~A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~-------~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~ 236 (714)
T TIGR02437 167 IASGKENRAEDALKVGAVDAVVTADKLGAAALQLLKDAINGK-------LDWKAKR-QPKLEPLK--LSKIEAMMSFTTA 236 (714)
T ss_pred HHcCCcCCHHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcC-------CcccccC-CCCccccc--ccchHHHHHHHHH
Confidence 9999999999999999999999988875433333211 0000 0001000 00000000 0111222111111
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
. ....++..++.|...+.. ++++.+...++++++..|.+.+.+++.++ +.+..++.|+
T Consensus 237 ~------------------~~~~~~~~~~~pap~~~~-~~v~~~~~~~~~~gl~~E~~~f~~l~~s~---~a~~l~~~ff 294 (714)
T TIGR02437 237 K------------------GMVAQVAGPHYPAPMTAV-KTIEKAARFGRDKALEIEAKGFVKLAKTS---EAKALIGLFL 294 (714)
T ss_pred H------------------HHHHHhhcCCCCCHHHHH-HHHHHHhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHh
Confidence 1 112334445555444444 67888878889999999999999999765 9999999998
Q ss_pred ccC
Q 017189 323 LDK 325 (375)
Q Consensus 323 ~ek 325 (375)
.++
T Consensus 295 ~~r 297 (714)
T TIGR02437 295 NDQ 297 (714)
T ss_pred hhH
Confidence 765
|
Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399. |
| >PLN02267 enoyl-CoA hydratase/isomerase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=315.66 Aligned_cols=179 Identities=18% Similarity=0.182 Sum_probs=154.6
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCce-EEEEeeCCCCccccCCchhHhhccc--hh-hHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVK-LLILKGKGRAFCAGGDVAAVVRGIN--EG-AKFF 86 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr-~vVltg~g~~F~aG~Dl~~~~~~~~--~~-~~~~ 86 (375)
+.++.+++|++|+||||++ |+||.+|+.+|.++++.++.|++++ +||++|.|++||+|+|++++..... .. ..+.
T Consensus 2 ~~~~~~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~ 80 (239)
T PLN02267 2 CTLEKRGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAAGSAPSRLHLMV 80 (239)
T ss_pred ceeEecCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhccccCHHHHHHHH
Confidence 5678899999999999985 9999999999999999999999875 7778999999999999998753211 11 2234
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEe-CCeEEeccccccCCCCCccHHHHHhhcch-HHH-HHH
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT-ENSVFAMPETALGLFPDIGASYFLSRLPG-FFG-EYV 163 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~-~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a-~~l 163 (375)
..+.+++.++.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+++++.++++++| .++ +++
T Consensus 81 ~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~~a~~~l 160 (239)
T PLN02267 81 AKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSPAARRDV 160 (239)
T ss_pred HHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChHHHHHHH
Confidence 456678888999999999999999999999999999999998 56899999999999744445778999998 667 689
Q ss_pred hhcCCccCHHHHHHcCccceecCC-ccH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPS-SRL 190 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~-~~l 190 (375)
++||++++|+||+++||||+++|+ +++
T Consensus 161 lltG~~~~a~eA~~~Glv~~vv~~~~~l 188 (239)
T PLN02267 161 LLRAAKLTAEEAVEMGIVDSAHDSAEET 188 (239)
T ss_pred HHcCCcCCHHHHHHCCCcceecCCHHHH
Confidence 999999999999999999999985 455
|
|
| >COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=303.84 Aligned_cols=251 Identities=24% Similarity=0.422 Sum_probs=206.8
Q ss_pred CCCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeC--C-CCccccCCchhHhhcc---
Q 017189 7 QEDQVLEEET-SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK--G-RAFCAGGDVAAVVRGI--- 79 (375)
Q Consensus 7 ~~~~v~~~~~-~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~--g-~~F~aG~Dl~~~~~~~--- 79 (375)
.++.|.+++. ++|+.||||||+++|++.+.++.||.++|..++.|++|.+|||||. | ++||+|+|-+--....
T Consensus 16 ~y~dI~Y~~~~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~ 95 (282)
T COG0447 16 GYEDITYEKSVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYV 95 (282)
T ss_pred CcceeEEeeccCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCcc
Confidence 4788999998 9999999999999999999999999999999999999999999985 5 8999999987543311
Q ss_pred chhhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H
Q 017189 80 NEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F 158 (375)
Q Consensus 80 ~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~ 158 (375)
.+...-.-...++-+.|+.+||||||.|+|+|+|||-.|-+.||+.||+++|+|++...++|-+-++.++.+|.|++| .
T Consensus 96 ~d~~~~rLnvLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~VGqK 175 (282)
T COG0447 96 DDDGIPRLNVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIVGQK 175 (282)
T ss_pred CCccCcccchhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHhhhh
Confidence 111111112345667789999999999999999999999999999999999999999999999988878889999999 4
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
.|+++.+.++.++|+||+++|+||.|||.++|+. +.+
T Consensus 176 kArEIwfLcR~Y~A~eal~MGlVN~Vvp~~~LE~--e~v----------------------------------------- 212 (282)
T COG0447 176 KAREIWFLCRQYDAEEALDMGLVNTVVPHADLEK--ETV----------------------------------------- 212 (282)
T ss_pred hhHHhhhhhhhccHHHHHhcCceeeeccHHHHHH--HHH-----------------------------------------
Confidence 6999999999999999999999999999988854 333
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHH--HHHHHHHHHHHHHhhCCCcchHHh
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVG--QCLIREYRMVCHVMMGEVSKDFFE 316 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~--~~l~~e~~~~~~~~~~~~s~d~~e 316 (375)
.| ++.|.++||.+++..|.+++.-.+ ++. +.+.-+... ++. ++++.+|
T Consensus 213 --------------------~W----~~E~l~kSP~AlR~LK~Afnad~D-GlaG~q~~ag~at~---L~Y--mTdEa~E 262 (282)
T COG0447 213 --------------------QW----AREMLAKSPTALRMLKAAFNADCD-GLAGLQELAGNATL---LYY--MTDEAQE 262 (282)
T ss_pred --------------------HH----HHHHHhcChHHHHHHHHHhcCCCc-hhhHHHHhcccceE---EEE--echhhhh
Confidence 35 588999999999999999975433 221 111111111 121 4579999
Q ss_pred hHhhhhccCCCCCCCC
Q 017189 317 GCRAILLDKDKNPKWK 332 (375)
Q Consensus 317 gv~A~l~ek~r~P~w~ 332 (375)
|-.|| .|| |+|.|+
T Consensus 263 Gr~AF-~eK-R~Pdf~ 276 (282)
T COG0447 263 GRDAF-LEK-RKPDFS 276 (282)
T ss_pred hHHHH-hhc-cCCChH
Confidence 99999 599 899987
|
|
| >TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=351.93 Aligned_cols=291 Identities=19% Similarity=0.272 Sum_probs=212.4
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEE-EEeeCCCCccccCCchhHhhccc-h-
Q 017189 6 SQEDQVLEEETSFVRILTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLL-ILKGKGRAFCAGGDVAAVVRGIN-E- 81 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~v-Vltg~g~~F~aG~Dl~~~~~~~~-~- 81 (375)
+.++.+.++.+++|++||||||+ +.|+||.+|+.+|.++++.++.|+++|+| |+||.|++||+|+|++++..... .
T Consensus 10 ~~~~~~~~~~~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~~~~~~ 89 (737)
T TIGR02441 10 MARTHRHYEVKGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAACKTAQE 89 (737)
T ss_pred CCCCeEEEEEECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhccCChHH
Confidence 44667899999999999999998 68999999999999999999999999965 56999999999999999863211 1
Q ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC--eEEeccccccCCCCCccHHHHHhhcch-H
Q 017189 82 GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN--SVFAMPETALGLFPDIGASYFLSRLPG-F 158 (375)
Q Consensus 82 ~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~~G~~p~~g~~~~l~rl~g-~ 158 (375)
...+.....+++.++.++||||||+|||+|+|||++|+|+||+|||+++ ++|++||+++|++|++|++++|+|++| .
T Consensus 90 ~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~ 169 (737)
T TIGR02441 90 VTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVP 169 (737)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHH
Confidence 1334455667888999999999999999999999999999999999987 589999999999999999999999999 6
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCC--cc-----------HHHHHHHHHh-cCCCChHHHHHHHHHhccCCCCCcc
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPS--SR-----------LALLEEALYK-VNSSDPAVISAVIDKFSLEPYLKDH 224 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~--~~-----------l~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (375)
.+++|++||++++|++|+++||||+|||+ ++ +.....++.+ +... +...+++.... +...
T Consensus 170 ~A~~l~ltG~~i~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~-----~~~~~~~~~~~-~~~~ 243 (737)
T TIGR02441 170 AALDMMLTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANG-----KLSINRDKGLV-HKIT 243 (737)
T ss_pred HHHHHHHcCCcCCHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcc-----cCCcccccccc-Cccc
Confidence 79999999999999999999999999986 21 2111111110 0000 00000000000 0000
Q ss_pred hhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHH
Q 017189 225 SAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCH 304 (375)
Q Consensus 225 ~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~ 304 (375)
.... +.-+ ....+++.. .+++.++...+.|...+ +.+++..+...++++++..|.+.|..
T Consensus 244 ~~~~-----~~~~---~~~~~~~~~-----------~~~~~~~~~g~~~Ap~~-~l~~v~~~~~~~~~~gl~~E~~~f~~ 303 (737)
T TIGR02441 244 QYVM-----TNPF---VRQQVYKTA-----------EDKVMKQTKGLYPAPLK-ILDVVRTGYDQGPDAGYEAESKAFGE 303 (737)
T ss_pred hhhc-----ccch---hHHHHHHHH-----------HHHHHHhccCCCccHHH-HHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 0000 0000 001111111 11222333333554444 44688888888999999999999999
Q ss_pred HhhCCCcchHHhhHhhhhccC
Q 017189 305 VMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 305 ~~~~~~s~d~~egv~A~l~ek 325 (375)
++.++ ..+.-++.|+.++
T Consensus 304 l~~s~---~a~al~~~f~~~~ 321 (737)
T TIGR02441 304 LSMTF---ESKALIGLFHGQT 321 (737)
T ss_pred HhCCH---HHHHHHHHHHHHH
Confidence 99765 8888899998775
|
Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). |
| >KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=290.52 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=222.8
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--hHHHH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--AKFFS 87 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--~~~~~ 87 (375)
..+++.+++|..|+||+|+|+|.|+..|+.+|.+.|....++.++|+|||+..|+.||+|.||+++....... ...+.
T Consensus 33 ~g~~~~~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e~g~d~haevFq 112 (287)
T KOG1682|consen 33 LGLVKEHNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNEPGSDIHAEVFQ 112 (287)
T ss_pred ccccccccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcCccchHHHHHHH
Confidence 3456677999999999999999999999999999999988889999999999999999999999997765322 55667
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
...+++.-|+++|+|||+.|||+|.++|+.|...||+++|+++++|..|..++|++...-+. -|.|.+. ..+.||++|
T Consensus 113 tc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGv-AlaRavpRkva~~ML~T 191 (287)
T KOG1682|consen 113 TCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGV-ALARAVPRKVAAYMLMT 191 (287)
T ss_pred HHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcch-hHhhhcchhHHHHHHHh
Confidence 77888999999999999999999999999999999999999999999999999997554443 4778887 569999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|.+|++++|+..|||+++||.++++...+.
T Consensus 192 g~Pi~~eeAl~sGlvskvVp~~el~~e~~~-------------------------------------------------- 221 (287)
T KOG1682|consen 192 GLPITGEEALISGLVSKVVPAEELDKEIEE-------------------------------------------------- 221 (287)
T ss_pred CCCCchHHHHHhhhhhhcCCHHHHHHHHHH--------------------------------------------------
Confidence 999999999999999999999988542222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+..+|...|...+.+.|+.+......+-.+++....+.++.-+.-+ |++|||.+| ++|
T Consensus 222 -----------------i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~ql~---d~kegiasf-~~k- 279 (287)
T KOG1682|consen 222 -----------------ITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENFQLG---DTKEGIASF-FEK- 279 (287)
T ss_pred -----------------HHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhccccc---chHHHHHHH-hcc-
Confidence 2577888888889999999998888888999999999999988876 999999999 599
Q ss_pred CCCCCCCC
Q 017189 327 KNPKWKPS 334 (375)
Q Consensus 327 r~P~w~~~ 334 (375)
|.|+|+|.
T Consensus 280 rp~~~~h~ 287 (287)
T KOG1682|consen 280 RPPNWKHQ 287 (287)
T ss_pred CCCCcCCC
Confidence 89999873
|
|
| >KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=297.24 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=222.5
Q ss_pred CCCCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--
Q 017189 6 SQEDQVLEEETSFVRILTLN-RPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-- 82 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itln-rp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 82 (375)
+.+..+.+++++|+..|.+| ||++.|+++.+|+.++.++|..+.+|+++..+|++|.|+.||+|.|++.+.......
T Consensus 4 ~~~~~~vv~~~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~ 83 (266)
T KOG0016|consen 4 MRYREIVVTRENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDAN 83 (266)
T ss_pred ccccceEEEecCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCccc
Confidence 45778999999999999999 999999999999999999999999999999999999999999999999886654322
Q ss_pred ------hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc
Q 017189 83 ------AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLP 156 (375)
Q Consensus 83 ------~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~ 156 (375)
..+...+..+...+..+|||+||.|||+|+|.|..+.-.||+++|+|+++|..|++++|..|.+|+++.+|+++
T Consensus 84 ~~~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~im 163 (266)
T KOG0016|consen 84 EESDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIM 163 (266)
T ss_pred ccchhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhh
Confidence 11223333467788899999999999999999999999999999999999999999999999999999999999
Q ss_pred h-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHH
Q 017189 157 G-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235 (375)
Q Consensus 157 g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (375)
| ..|.+|++.|++++|+||.+.|||+++++.+.+.. ..+
T Consensus 164 G~~~A~E~ll~~~kltA~Ea~~~glVskif~~~tf~~--~v~-------------------------------------- 203 (266)
T KOG0016|consen 164 GSASANEMLLFGEKLTAQEACEKGLVSKIFPAETFNE--EVL-------------------------------------- 203 (266)
T ss_pred chhhHHHHHHhCCcccHHHHHhcCchhhhcChHHHHH--HHH--------------------------------------
Confidence 9 67999999999999999999999999999977743 333
Q ss_pred HhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHH
Q 017189 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFF 315 (375)
Q Consensus 236 ~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~ 315 (375)
+.++++++.||.+++..|+++|......+..+.+.|...+...|.++ |+.
T Consensus 204 ---------------------------~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~s~---e~~ 253 (266)
T KOG0016|consen 204 ---------------------------KKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWVSA---ECL 253 (266)
T ss_pred ---------------------------HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhccCh---HHH
Confidence 22688999999999999999999999999999999999999999765 999
Q ss_pred hhHhhhhc
Q 017189 316 EGCRAILL 323 (375)
Q Consensus 316 egv~A~l~ 323 (375)
+.+.+|+.
T Consensus 254 ~~~~~~~~ 261 (266)
T KOG0016|consen 254 ARFKQYLS 261 (266)
T ss_pred HHHHHHhc
Confidence 99999963
|
|
| >cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=288.32 Aligned_cols=182 Identities=34% Similarity=0.549 Sum_probs=169.8
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh---hHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---AKFFS 87 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---~~~~~ 87 (375)
+.++++++|++|+||+|++.|++|.+|+++|.++++.++.|+++++|||||.|+.||+|.|++++....... ..+..
T Consensus 1 i~~~~~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~~~~~~~~~~ 80 (195)
T cd06558 1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAGEEARAFIR 80 (195)
T ss_pred CEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcccccchhHHHHHH
Confidence 467888999999999999999999999999999999999999999999999999999999999987655432 46777
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.++.++.++..++||+||+|||+|+|+|++++++||+||++++++|++||+++|++|++|+++++++++| ..+.+++++
T Consensus 81 ~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~l~ 160 (195)
T cd06558 81 ELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELLLT 160 (195)
T ss_pred HHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHHHc
Confidence 8889999999999999999999999999999999999999999999999999999999999999999998 579999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLAL 192 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~ 192 (375)
|+.++|+||.++|||+++++.+++..
T Consensus 161 g~~~~a~ea~~~Glv~~~~~~~~l~~ 186 (195)
T cd06558 161 GRRISAEEALELGLVDEVVPDEELLA 186 (195)
T ss_pred CCccCHHHHHHcCCCCeecChhHHHH
Confidence 99999999999999999999977744
|
This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. |
| >TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=319.94 Aligned_cols=187 Identities=18% Similarity=0.236 Sum_probs=161.3
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHhh-cCCCceEEEEeeC-CCCccccCCch
Q 017189 6 SQEDQVLEEETSFVRILTLNRPR----------QLNALSAQMISRLLELFQRYE-TDSNVKLLILKGK-GRAFCAGGDVA 73 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~----------~~Nal~~~~~~eL~~~l~~~~-~d~~vr~vVltg~-g~~F~aG~Dl~ 73 (375)
..+++|.++++++|++||||||+ +.|+||.+|+.+|.++++.++ .|+++|+|||||. |++||+|.|++
T Consensus 8 ~~~~~v~~~~~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~ 87 (546)
T TIGR03222 8 SQYRHWKLTFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIF 87 (546)
T ss_pred CCCceEEEEeeCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHH
Confidence 45778999999999999999976 899999999999999999999 7899999999997 49999999999
Q ss_pred hHhhccchh-h---HHHH-HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC--eEEeccccc-cCCCCC
Q 017189 74 AVVRGINEG-A---KFFS-KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN--SVFAMPETA-LGLFPD 145 (375)
Q Consensus 74 ~~~~~~~~~-~---~~~~-~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~-~G~~p~ 145 (375)
++....... . .+.. ....+...+.++||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|++|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~ 167 (546)
T TIGR03222 88 MLGLSTHAWKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPG 167 (546)
T ss_pred HHhccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCc
Confidence 875321111 1 1111 1123455677899999999999999999999999999999986 799999997 999999
Q ss_pred ccHHHHHh--hcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHH
Q 017189 146 IGASYFLS--RLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLAL 192 (375)
Q Consensus 146 ~g~~~~l~--rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~ 192 (375)
+|++.+++ +.+| .++++|++||+.++|+||+++||||++||++++.+
T Consensus 168 ~gg~~~l~~~~~vg~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~ 217 (546)
T TIGR03222 168 TGGLTRVTDKRRVRRDHADIFCTIEEGVRGKRAKEWRLVDEVVKPSQFDA 217 (546)
T ss_pred cchhhhccccchhCHHHHHHHHHcCCCccHHHHHHcCCceEEeChHHHHH
Confidence 99998887 6778 67999999999999999999999999999987744
|
In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH. |
| >PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=314.34 Aligned_cols=187 Identities=18% Similarity=0.236 Sum_probs=160.7
Q ss_pred CCCCcEEEEEeCCEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHhh-cCCCceEEEEeeCC-CCccccCCch
Q 017189 6 SQEDQVLEEETSFVRILTLNRP-------R---QLNALSAQMISRLLELFQRYE-TDSNVKLLILKGKG-RAFCAGGDVA 73 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp-------~---~~Nal~~~~~~eL~~~l~~~~-~d~~vr~vVltg~g-~~F~aG~Dl~ 73 (375)
+.++.+.++.+++|++|||||| + +.|+||.+|+.+|.++++.++ .|+++|+|||||.+ ++||+|+|++
T Consensus 12 ~~~~~~~~e~~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~ 91 (550)
T PRK08184 12 SQYRHWKLSFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIF 91 (550)
T ss_pred CCCceEEEEeeCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHH
Confidence 4577899999999999999965 3 899999999999999999999 78999999999985 8999999999
Q ss_pred hHhhccchh-hHH---HHHH-HHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC--eEEeccccc-cCCCCC
Q 017189 74 AVVRGINEG-AKF---FSKE-FILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN--SVFAMPETA-LGLFPD 145 (375)
Q Consensus 74 ~~~~~~~~~-~~~---~~~~-~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~-~G~~p~ 145 (375)
.+....... ..+ .... ..+...+.++||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|++|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P~ 171 (550)
T PRK08184 92 MLGGSSHAWKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLPG 171 (550)
T ss_pred hHhccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCCC
Confidence 875422111 111 1111 22445678899999999999999999999999999999987 899999997 999999
Q ss_pred ccHHHHHh--hcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHH
Q 017189 146 IGASYFLS--RLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLAL 192 (375)
Q Consensus 146 ~g~~~~l~--rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~ 192 (375)
+|++++++ +++| ..+++|++||+.++|+||+++||||++||++++..
T Consensus 172 ~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA~~~GLVd~vv~~d~l~~ 221 (550)
T PRK08184 172 TGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRAVDWRLVDEVVKPSKFDA 221 (550)
T ss_pred cchHHHhhhhhhcCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHH
Confidence 99999988 6788 57999999999999999999999999999887743
|
|
| >PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=171.93 Aligned_cols=115 Identities=45% Similarity=0.867 Sum_probs=99.3
Q ss_pred hHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhh
Q 017189 228 HWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMM 307 (375)
Q Consensus 228 ~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~ 307 (375)
.+...|++||+.+++++|+++|+.+ .++|+.++++.|.++||.|+++|.++++++...++.++++.|+++..+++.
T Consensus 4 ~~~~~I~~~F~~~s~~eI~~~L~~~----~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~ 79 (118)
T PF13766_consen 4 EHLEAIDRCFSADSVEEIIEALEAD----GDEWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMR 79 (118)
T ss_dssp HCHHHHHHHTTSSSHHHHHHHHHHH----S-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHcc----CcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc
Confidence 4678999999999999999999993 579999999999999999999999999999999999999999999999998
Q ss_pred CCCcchHHhhHhhhhccCCCCCCCCCCCccCCCHHHHHhccc
Q 017189 308 GEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFS 349 (375)
Q Consensus 308 ~~~s~d~~egv~A~l~ek~r~P~w~~~~~~~v~~~~v~~~f~ 349 (375)
.+ ||.|||+|.|+||++.|+|+|+++++|++++|+++|+
T Consensus 80 ~~---DF~EGVRA~LIDKd~~P~W~p~~l~~V~~~~V~~~f~ 118 (118)
T PF13766_consen 80 HP---DFAEGVRALLIDKDKNPKWSPASLEDVSDEDVDSFFE 118 (118)
T ss_dssp CS---CHHHHHHHHTTS-------SSSSCCCS-HHHHHHHCS
T ss_pred cc---hHHHHHHHHHhcCCCCCCCCCCChHHCCHHHHHHHhC
Confidence 76 9999999999999999999999999999999999995
|
|
| >cd07014 S49_SppA Signal peptide peptidase A | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-19 Score=158.81 Aligned_cols=140 Identities=16% Similarity=0.052 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccchhh
Q 017189 36 QMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115 (375)
Q Consensus 36 ~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG 115 (375)
-.+.+|.++++.+.+|+++++|||++ +|.|+|+... ..+.+++..+.+++|||||+|||.|.|+|
T Consensus 22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~-----------~~~~~~i~~~~~~~kpVia~v~G~a~g~g 86 (177)
T cd07014 22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTAS-----------EVIRAELAAARAAGKPVVASGGGNAASGG 86 (177)
T ss_pred cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHH-----------HHHHHHHHHHHhCCCCEEEEECCchhHHH
Confidence 35789999999999999999999997 6889887643 12344666778899999999999999999
Q ss_pred hhhhhcCCEEEEeCCeEEeccccccCCCCCccHHH--------HHhhcch--H-HHHHHhhcCCccCHHHHHHcCcccee
Q 017189 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASY--------FLSRLPG--F-FGEYVGLTGARLDGAEMRACGLATHF 184 (375)
Q Consensus 116 ~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~--------~l~rl~g--~-~a~~l~ltG~~i~A~eA~~~GLv~~v 184 (375)
+.|+++||+++++++++|+.+.+..+..+...... .+++..| . ..++++..|..++|++|++.||||++
T Consensus 87 ~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~GLVD~v 166 (177)
T cd07014 87 YWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANGLVDSL 166 (177)
T ss_pred HHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcCCcccC
Confidence 99999999999999999999988776433222222 3444444 2 36788899999999999999999999
Q ss_pred cCCccH
Q 017189 185 VPSSRL 190 (375)
Q Consensus 185 v~~~~l 190 (375)
.+.+++
T Consensus 167 ~~~~e~ 172 (177)
T cd07014 167 GSFDDA 172 (177)
T ss_pred CCHHHH
Confidence 987665
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p |
| >cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-18 Score=152.41 Aligned_cols=146 Identities=14% Similarity=0.102 Sum_probs=114.8
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEe-eCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK-GKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVlt-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
+.|.++. .++..+...+.++|+.++.|+ ++.|+|. . |-|+++..- ..++..|..
T Consensus 2 ~vv~i~g-----~I~~~~~~~l~~~l~~a~~~~-~~~vvl~In-----SpGG~v~~~--------------~~i~~~l~~ 56 (187)
T cd07020 2 YVLEING-----AITPATADYLERAIDQAEEGG-ADALIIELD-----TPGGLLDST--------------REIVQAILA 56 (187)
T ss_pred EEEEEee-----EEChHHHHHHHHHHHHHHhCC-CCEEEEEEE-----CCCCCHHHH--------------HHHHHHHHh
Confidence 4566653 366778889999999998765 7877776 3 334443221 234556778
Q ss_pred CCCcEEEEEc---cccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCc--------------cHHHHHhhcchH---
Q 017189 99 YTKPQVSILN---GIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDI--------------GASYFLSRLPGF--- 158 (375)
Q Consensus 99 ~~kPvIAavn---G~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~--------------g~~~~l~rl~g~--- 158 (375)
+|||||++|+ |+|.|||+.|+++||+++++++++|+++++..|..+.. +....+++..|.
T Consensus 57 ~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~ 136 (187)
T cd07020 57 SPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRGRNAE 136 (187)
T ss_pred CCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 9999999999 99999999999999999999999999999985554432 245567787773
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCc-cH
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSS-RL 190 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~-~l 190 (375)
.+++++++|+.++|+||+++||||+++++. ++
T Consensus 137 ~a~~~l~~g~~~~a~eA~~~Glvd~v~~~~~~~ 169 (187)
T cd07020 137 WAEKAVRESLSLTAEEALKLGVIDLIAADLNEL 169 (187)
T ss_pred HHHHHHHcCCeecHHHHHHcCCcccccCCHHHH
Confidence 588999999999999999999999999885 44
|
Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c |
| >cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.7e-16 Score=140.43 Aligned_cols=157 Identities=17% Similarity=0.083 Sum_probs=110.1
Q ss_pred CEEEEEEcCC--CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHH
Q 017189 18 FVRILTLNRP--RQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL 95 (375)
Q Consensus 18 ~v~~itlnrp--~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~ 95 (375)
+|++|.++.| ...+..+..++.+|.++|+.+..|+++++|||+ .||.|+|+..+. .+.+.+..
T Consensus 1 ~i~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~-----------~~~~~l~~ 65 (211)
T cd07019 1 SIGVVFANGAIVDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASE-----------VIRAELAA 65 (211)
T ss_pred CEEEEEEEEEEeCCCCCCCccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHH-----------HHHHHHHH
Confidence 3555555532 122333455789999999999999999999998 699999987652 22345567
Q ss_pred HHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccc------------cccCCCC---Cc-c------------
Q 017189 96 MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPE------------TALGLFP---DI-G------------ 147 (375)
Q Consensus 96 i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe------------~~~G~~p---~~-g------------ 147 (375)
+..++|||||+++|.|.|+|+.|+++||+++|++.+.|+.-- -++|+-+ -. |
T Consensus 66 ~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~gsiGv~~~~~~~~~~l~k~Gv~~~~~~~~g~~k~~~~~~~s~ 145 (211)
T cd07019 66 ARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPP 145 (211)
T ss_pred HHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEEEeEEEEEcCCHHHHHHhcCCceEEEEecCcccCCCCCCCCH
Confidence 788999999999999999999999999999999998886322 1233311 11 1
Q ss_pred -HHHHHhhcc---------------h--HHHHHHhhcCCccCHHHHHHcCccceecCCcc
Q 017189 148 -ASYFLSRLP---------------G--FFGEYVGLTGARLDGAEMRACGLATHFVPSSR 189 (375)
Q Consensus 148 -~~~~l~rl~---------------g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~ 189 (375)
.-..+.+.+ + .....-...|..+++++|++.||||++..-++
T Consensus 146 e~r~~~~~~ld~~~~~f~~~Va~~R~~~~~~l~~~~~~~~~~~~~A~~~GLvD~i~~~~~ 205 (211)
T cd07019 146 EAQLGLQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDD 205 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHhcCCcEEeHHHHHHcCCcccCCCHHH
Confidence 001111111 1 11222255788999999999999999987544
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te |
| >cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.9e-14 Score=123.61 Aligned_cols=134 Identities=18% Similarity=0.134 Sum_probs=103.4
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..++.+|.+.|+.++.|+++++|+|.. .|.|+|+... ..+...+..++||||+.++|.|.
T Consensus 8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~--------------~~i~~~l~~~~kpvva~~~g~~~ 69 (161)
T cd00394 8 IEDVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAG--------------MNIVDALQASRKPVIAYVGGQAA 69 (161)
T ss_pred EccchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHH--------------HHHHHHHHHhCCCEEEEECChhH
Confidence 56688999999999999999999999986 4777765432 23445667788999999999999
Q ss_pred hhhhhhhhcCCEEEEeCCeEEeccccccCCCCCcc--H----HHH----Hhhcc-------h--H-HHHHHhhcCCccCH
Q 017189 113 GGGAGVSIHGRFRVATENSVFAMPETALGLFPDIG--A----SYF----LSRLP-------G--F-FGEYVGLTGARLDG 172 (375)
Q Consensus 113 GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g--~----~~~----l~rl~-------g--~-~a~~l~ltG~~i~A 172 (375)
++|+.|+++||.|++.+++.|++..+..+.....+ . ... ..+.. | . ....++..|..++|
T Consensus 70 s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~~~~~a 149 (161)
T cd00394 70 SAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKDLVLTA 149 (161)
T ss_pred HHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCCcEEcH
Confidence 99999999999999999999999888766543220 0 011 11111 1 1 24567778999999
Q ss_pred HHHHHcCcccee
Q 017189 173 AEMRACGLATHF 184 (375)
Q Consensus 173 ~eA~~~GLv~~v 184 (375)
+||+++||||++
T Consensus 150 ~eA~~~GLvD~i 161 (161)
T cd00394 150 QEALEYGLVDAL 161 (161)
T ss_pred HHHHHcCCcCcC
Confidence 999999999975
|
Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec |
| >cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.4e-13 Score=125.86 Aligned_cols=96 Identities=19% Similarity=0.140 Sum_probs=74.7
Q ss_pred cCCCCCCC-CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcE
Q 017189 25 NRPRQLNA-LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQ 103 (375)
Q Consensus 25 nrp~~~Na-l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPv 103 (375)
++|...|+ ++..++.+|.++|+.++.|+++++|||+. +|.|+++... ..+...+..+.. +|||
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~-----------~~l~~~l~~~~~-~KpV 76 (214)
T cd07022 13 PRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGV-----------FELADAIRAARA-GKPI 76 (214)
T ss_pred CCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHH-----------HHHHHHHHHHhc-CCCE
Confidence 45555564 45689999999999999999999999986 5666664332 122333333444 6999
Q ss_pred EEEEccccchhhhhhhhcCCEEEEeCCeEEecc
Q 017189 104 VSILNGIVMGGGAGVSIHGRFRVATENSVFAMP 136 (375)
Q Consensus 104 IAavnG~a~GgG~~Lala~D~ria~~~a~f~~p 136 (375)
||+++|.|.|+|+.|+++||+++|++.+.|+..
T Consensus 77 iA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~i 109 (214)
T cd07022 77 VAFVNGLAASAAYWIASAADRIVVTPTAGVGSI 109 (214)
T ss_pred EEEECCchhhHHHHHHhcCCEEEEcCCCeEEee
Confidence 999999999999999999999999999987654
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. |
| >TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-13 Score=142.72 Aligned_cols=155 Identities=14% Similarity=0.119 Sum_probs=117.5
Q ss_pred EeCCEEEEEEcCCC--CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC---CCccccCCchhHhhccchhhHHHHHH
Q 017189 15 ETSFVRILTLNRPR--QLNALSAQMISRLLELFQRYETDSNVKLLILKGKG---RAFCAGGDVAAVVRGINEGAKFFSKE 89 (375)
Q Consensus 15 ~~~~v~~itlnrp~--~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g---~~F~aG~Dl~~~~~~~~~~~~~~~~~ 89 (375)
.+++|++|+++.+= ..|..+....+.+.+.|+.+..|++|++|||+-.. ..||+ ..+
T Consensus 306 ~~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrinSpGGs~~as------------------e~i 367 (584)
T TIGR00705 306 VQDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRINSPGGSVFAS------------------EII 367 (584)
T ss_pred CCCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEecCCCCCHHHH------------------HHH
Confidence 46889999999753 23434444567888899999999999999999542 33332 122
Q ss_pred HHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEE------eccc------cccCCCCCccHHHHHhh---
Q 017189 90 FILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVF------AMPE------TALGLFPDIGASYFLSR--- 154 (375)
Q Consensus 90 ~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f------~~pe------~~~G~~p~~g~~~~l~r--- 154 (375)
++.+.++...+||||+.++|.|.+||+.++++||.++|++.+.+ +.+. .++|+.|+.+.+..+.+
T Consensus 368 ~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~s~ 447 (584)
T TIGR00705 368 RRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANVSL 447 (584)
T ss_pred HHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCCCC
Confidence 33445566778999999999999999999999999999999876 5553 58999888776654443
Q ss_pred -------------------------cch-HH-----HHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 155 -------------------------LPG-FF-----GEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 155 -------------------------l~g-~~-----a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
.++ .+ ..+.+.+|+.++|++|+++||||++..-
T Consensus 448 ~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~ig~~ 511 (584)
T TIGR00705 448 LRPLTAEDQAIMQLSVEAGYRRFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDALGGL 511 (584)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccCCCH
Confidence 333 22 5677889999999999999999999543
|
E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. |
| >cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.8e-13 Score=123.26 Aligned_cols=154 Identities=18% Similarity=0.165 Sum_probs=108.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
|++|.++.+=... ...++.+|.++|+.+..|+++++|||++ +|.|+|+... ..+.+.+..+..
T Consensus 2 v~vi~i~g~i~~~--~~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~-----------~~i~~~i~~~~~ 64 (208)
T cd07023 2 IAVIDIEGTISDG--GGIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVAS-----------EEIYREIRRLRK 64 (208)
T ss_pred EEEEEEEEEEcCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHH-----------HHHHHHHHHHHh
Confidence 5566666431000 3678999999999999999999999998 5889887652 123445667788
Q ss_pred CCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecccc------------ccCCCCCcc------------------H
Q 017189 99 YTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET------------ALGLFPDIG------------------A 148 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~------------~~G~~p~~g------------------~ 148 (375)
++|||||+++|.|.|+|+.|+++||++++++.+.|+..-+ ++|+-+... .
T Consensus 65 ~~kpvia~v~g~~~s~g~~lA~aaD~i~a~~~s~~g~iG~~~~~~~~~~~l~k~Gi~~~~~~~g~~K~~~~~~~~~s~~~ 144 (208)
T cd07023 65 AKKPVVASMGDVAASGGYYIAAAADKIVANPTTITGSIGVIGQGPNLEELLDKLGIERDTIKSGPGKDKGSPDRPLTEEE 144 (208)
T ss_pred cCCcEEEEECCcchhHHHHHHhhCCEEEECCCCeEEeCcEEEecCCHHHHHHhcCCceEEEecCCCccCCCCCCCCCHHH
Confidence 8999999999999999999999999999999998864322 234322211 0
Q ss_pred HHHHhhcc---------------h--HHHHHHhhcCCccCHHHHHHcCccceecCCcc
Q 017189 149 SYFLSRLP---------------G--FFGEYVGLTGARLDGAEMRACGLATHFVPSSR 189 (375)
Q Consensus 149 ~~~l~rl~---------------g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~ 189 (375)
...+..++ | .....-++.|..+++++|++.||||.+...++
T Consensus 145 ~e~~~~~l~~~~~~f~~~Va~~R~~~~~~~~~~~~~~~~~a~~A~~~gLiD~i~~~~~ 202 (208)
T cd07023 145 RAILQALVDDIYDQFVDVVAEGRGMSGERLDKLADGRVWTGRQALELGLVDELGGLDD 202 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHhcCCcEEEHHHHHHcCCCcccCCHHH
Confidence 11111111 1 11112256888999999999999999986544
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad |
| >cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease | Back alignment and domain information |
|---|
Probab=99.44 E-value=7e-13 Score=115.69 Aligned_cols=128 Identities=12% Similarity=0.115 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccchhh
Q 017189 36 QMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115 (375)
Q Consensus 36 ~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG 115 (375)
.+...+.+.|..+..+.. -.+.|.+.|+ ++.. ...+...|..++||||+.++|.|.|+|
T Consensus 15 ~~~~~~~~~l~~~~~~~~-i~l~inspGG------~~~~--------------~~~i~~~i~~~~~pvi~~v~g~a~s~g 73 (160)
T cd07016 15 VTAKEFKDALDALGDDSD-ITVRINSPGG------DVFA--------------GLAIYNALKRHKGKVTVKIDGLAASAA 73 (160)
T ss_pred cCHHHHHHHHHhccCCCC-EEEEEECCCC------CHHH--------------HHHHHHHHHhcCCCEEEEEcchHHhHH
Confidence 567888888998887733 3444455443 2211 123566678889999999999999999
Q ss_pred hhhhhcCCEEEEeCCeEEeccccccCCCCCccH---------------HHHHhhcch--HH-HHHHhhcCCccCHHHHHH
Q 017189 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGA---------------SYFLSRLPG--FF-GEYVGLTGARLDGAEMRA 177 (375)
Q Consensus 116 ~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~---------------~~~l~rl~g--~~-a~~l~ltG~~i~A~eA~~ 177 (375)
+.|+++||+|+++++++|+++....|..+.... ...+.+..| .. ...++.++..++|+||++
T Consensus 74 ~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a~eA~~ 153 (160)
T cd07016 74 SVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTAQEAVE 153 (160)
T ss_pred HHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcHHHHHH
Confidence 999999999999999999998877665443321 223566667 33 666777777899999999
Q ss_pred cCcccee
Q 017189 178 CGLATHF 184 (375)
Q Consensus 178 ~GLv~~v 184 (375)
+||||++
T Consensus 154 ~GliD~v 160 (160)
T cd07016 154 LGFADEI 160 (160)
T ss_pred cCCCCcC
Confidence 9999975
|
Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a |
| >TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type | Back alignment and domain information |
|---|
Probab=99.38 E-value=7.9e-12 Score=113.70 Aligned_cols=148 Identities=19% Similarity=0.219 Sum_probs=102.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
|++|+++.+= + ....+|.++|+.+..|+++++|||++. |.|+++... ..+...|..
T Consensus 2 v~vi~i~g~i-----~-~s~~~l~~~l~~a~~d~~i~~vvl~~~----s~Gg~~~~~--------------~~l~~~i~~ 57 (207)
T TIGR00706 2 IAILPVSGAI-----A-VSPEDFDKKIKRIKDDKSIKALLLRIN----SPGGTVVAS--------------EEIYEKLKK 57 (207)
T ss_pred EEEEEEEEEE-----e-cCHHHHHHHHHHHhhCCCccEEEEEec----CCCCCHHHH--------------HHHHHHHHH
Confidence 5666666431 1 336789999999999999999999984 777776532 223445555
Q ss_pred CC--CcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecccc------------ccCCCCC---------cc--------
Q 017189 99 YT--KPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET------------ALGLFPD---------IG-------- 147 (375)
Q Consensus 99 ~~--kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~------------~~G~~p~---------~g-------- 147 (375)
++ |||||.++|.|.|+|+.|+++||.++|++++.++.-.+ ++|+-+. .+
T Consensus 58 ~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~ 137 (207)
T TIGR00706 58 LKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTP 137 (207)
T ss_pred hcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCH
Confidence 55 99999999999999999999999999999988765333 2333210 00
Q ss_pred -HHHHHhhcc---------------h--HHHHHHhhcCCccCHHHHHHcCccceecCCccH
Q 017189 148 -ASYFLSRLP---------------G--FFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 148 -~~~~l~rl~---------------g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
....+.+++ | .....=++.|..+++++|++.||||++...+++
T Consensus 138 ~~~e~~~~~l~~~~~~f~~~va~~R~~~~~~~~~~~~~~~~~~~~A~~~gLvD~i~~~~~~ 198 (207)
T TIGR00706 138 EERDILQNLVNESYEQFVQVVAKGRNLPVEDVKKFADGRVFTGRQALKLRLVDKLGTEDDA 198 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHH
Confidence 001111111 1 111122468899999999999999999876664
|
The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively. |
| >cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.4e-11 Score=109.95 Aligned_cols=142 Identities=13% Similarity=0.055 Sum_probs=102.7
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
-+..++.+|.++|+.+..|++|++|||+..+..| ++.++.++ .+.+..+...+|||||.++| |.
T Consensus 26 ~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el--------------~~~i~~~~~~~kpVia~~~~-~~ 89 (222)
T cd07018 26 SSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEEL--------------RQALERFRASGKPVIAYADG-YS 89 (222)
T ss_pred cCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHH--------------HHHHHHHHHhCCeEEEEeCC-CC
Confidence 4567899999999999999999999999988666 65555544 33445566689999999998 88
Q ss_pred hhhhhhhhcCCEEEEeCCeEEeccccc------------cCCCCC---------ccHHHH-----------Hhhcc----
Q 017189 113 GGGAGVSIHGRFRVATENSVFAMPETA------------LGLFPD---------IGASYF-----------LSRLP---- 156 (375)
Q Consensus 113 GgG~~Lala~D~ria~~~a~f~~pe~~------------~G~~p~---------~g~~~~-----------l~rl~---- 156 (375)
+||+.|+++||.++|.+.+.|+..-+. +|+-+. .+..+. +..++
T Consensus 90 sggy~lasaad~I~a~p~~~vg~iGv~~~~~~~~~ll~klGv~~~~~~~G~~K~~~~~~~~~~~s~~~r~~~~~~l~~~~ 169 (222)
T cd07018 90 QGQYYLASAADEIYLNPSGSVELTGLSAETLFFKGLLDKLGVEVQVFRVGEYKSAVEPFTRDDMSPEAREQTQALLDSLW 169 (222)
T ss_pred chhhhhhhhCCEEEECCCceEEeeccchhhhhHHHHHHHcCCcEEEEEEeccccccchhhcccCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999885432 233221 111111 01111
Q ss_pred -------------hHHHHHHhhcCCccCHHHHHHcCccceecCCccH
Q 017189 157 -------------GFFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 157 -------------g~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
......-+..|..+++++|++.||||++...+++
T Consensus 170 ~~f~~~Va~~R~~~~~~~~~~~~~~~~~~~~A~~~GLvD~i~~~~e~ 216 (222)
T cd07018 170 DQYLADVAASRGLSPDALEALIDLGGDSAEEALEAGLVDGLAYRDEL 216 (222)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHcCCcHHHHHHHCCCCCcCCcHHHH
Confidence 1111122355999999999999999999976554
|
Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys |
| >cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.3e-10 Score=101.43 Aligned_cols=140 Identities=15% Similarity=0.215 Sum_probs=99.4
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
..|.++. .++..+...+.++|+.+.+++ +..|||.=. |.|+++. ....+...|..+
T Consensus 2 ~vi~i~g-----~I~~~~~~~l~~~l~~a~~~~-~~~ivl~in----spGG~v~--------------~~~~I~~~l~~~ 57 (178)
T cd07021 2 YVIPIEG-----EIDPGLAAFVERALKEAKEEG-ADAVVLDID----TPGGRVD--------------SALEIVDLILNS 57 (178)
T ss_pred EEEEEee-----EECHHHHHHHHHHHHHHHhCC-CCeEEEEEE----CcCCCHH--------------HHHHHHHHHHhC
Confidence 3455543 367788889999999999886 667766532 2333332 223456778889
Q ss_pred CCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccH--------HHH------Hhhcch-H--HHHH
Q 017189 100 TKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGA--------SYF------LSRLPG-F--FGEY 162 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~--------~~~------l~rl~g-~--~a~~ 162 (375)
++|||+.|+|.|.++|+.++++||+++|++++.|+.+.+- +..|. +.. +...-| . .+..
T Consensus 58 ~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v----~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~ 133 (178)
T cd07021 58 PIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEPI----PGDGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEA 133 (178)
T ss_pred CCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCeeE----cCCCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999999999999999999999988543 32222 111 112223 1 2455
Q ss_pred HhhcC-------------CccCHHHHHHcCccceecCC
Q 017189 163 VGLTG-------------ARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 163 l~ltG-------------~~i~A~eA~~~GLv~~vv~~ 187 (375)
|+--. -.++++||++.|++|.+.++
T Consensus 134 mv~~~~~v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~ 171 (178)
T cd07021 134 MVDKDIEVPGVGIKGGELLTLTADEALKVGYAEGIAGS 171 (178)
T ss_pred HhhhhcccccccccccceeeeCHHHHHHhCCeEEEECC
Confidence 55443 26999999999999999876
|
Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall |
| >cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.5e-07 Score=80.50 Aligned_cols=136 Identities=13% Similarity=0.168 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEc---c
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILN---G 109 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavn---G 109 (375)
++..+...|.+.++.++++ .++.|+|.=. |-|+.+.. ...+...|...++||++.|+ |
T Consensus 10 I~~~~~~~l~~~l~~A~~~-~~~~i~l~in----SPGG~v~~--------------~~~I~~~i~~~~~pvv~~v~p~g~ 70 (172)
T cd07015 10 ITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADA--------------AGNIVQRIQQSKIPVIIYVYPPGA 70 (172)
T ss_pred ECHhHHHHHHHHHHHHhcC-CCCeEEEEEE----CCCCCHHH--------------HHHHHHHHHhcCcCEEEEEecCCC
Confidence 6777888999999998875 4677776532 33443322 12345556778999999999 9
Q ss_pred ccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCC----cc----HHHHHh------hcch---HHHHHHhhcCCccCH
Q 017189 110 IVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPD----IG----ASYFLS------RLPG---FFGEYVGLTGARLDG 172 (375)
Q Consensus 110 ~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~----~g----~~~~l~------rl~g---~~a~~l~ltG~~i~A 172 (375)
.|..+|.-++++||.++|.+++.++....-.|..+. .. .+..+. +.-| ..+..++-....+++
T Consensus 71 ~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~~~~lta 150 (172)
T cd07015 71 SAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTP 150 (172)
T ss_pred eehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHhhcCcCH
Confidence 999999999999999999999999987774432120 00 111222 2223 236677778888999
Q ss_pred HHHHHcCccceecCC
Q 017189 173 AEMRACGLATHFVPS 187 (375)
Q Consensus 173 ~eA~~~GLv~~vv~~ 187 (375)
+||+++|++|.++.+
T Consensus 151 ~EA~~~G~iD~ia~~ 165 (172)
T cd07015 151 EEALKYGVIEVVARD 165 (172)
T ss_pred HHHHHcCCceeeeCC
Confidence 999999999999987
|
Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle |
| >cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease | Back alignment and domain information |
|---|
Probab=98.58 E-value=7.4e-07 Score=77.91 Aligned_cols=134 Identities=15% Similarity=0.108 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+..++.+.|..++.++..+.|+|.=. |.|+++. ....++..|..+++|+++.+.|.|.
T Consensus 9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~In----SpGG~v~--------------~~~~i~~~i~~~~~~v~~~~~g~aa 70 (162)
T cd07013 9 VEDISANQFAAQLLFLGAVNPEKDIYLYIN----SPGGDVF--------------AGMAIYDTIKFIKADVVTIIDGLAA 70 (162)
T ss_pred ECcHHHHHHHHHHHHHhcCCCCCCEEEEEE----CCCCcHH--------------HHHHHHHHHHhcCCCceEEEEeehh
Confidence 567899999999999998877776666532 3333322 1123455667788999999999999
Q ss_pred hhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccHHH---------------HHhhcch-H--HHHHHhhcCCccCH
Q 017189 113 GGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGASY---------------FLSRLPG-F--FGEYVGLTGARLDG 172 (375)
Q Consensus 113 GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~~~---------------~l~rl~g-~--~a~~l~ltG~~i~A 172 (375)
++|.-|+++|| .|++.++++|.+....-|......-.. .+.+..| . ....++-.+.-++|
T Consensus 71 S~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~~sa 150 (162)
T cd07013 71 SMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLERDTWLSA 150 (162)
T ss_pred hHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCccccH
Confidence 99999999999 688888888876544322211100000 1111113 1 23445555556799
Q ss_pred HHHHHcCcccee
Q 017189 173 AEMRACGLATHF 184 (375)
Q Consensus 173 ~eA~~~GLv~~v 184 (375)
+||+++||||++
T Consensus 151 ~eA~~~GliD~i 162 (162)
T cd07013 151 REAVEYGFADTI 162 (162)
T ss_pred HHHHHcCCCCcC
Confidence 999999999975
|
Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas |
| >KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.2e-08 Score=95.84 Aligned_cols=167 Identities=17% Similarity=0.092 Sum_probs=137.4
Q ss_pred CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hHHHHHHHHHHHH
Q 017189 18 FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AKFFSKEFILNYL 95 (375)
Q Consensus 18 ~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~l~~~ 95 (375)
+++.+.++ |+ .|..|.++..+|..-++.++.+..+++..+|+.. +.|++|.|..+........ ..++-++.+++.+
T Consensus 66 ~~~~~dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg~h~fspa~~m~LlEii~~ 143 (380)
T KOG1683|consen 66 GFANADMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVGMHFFSPAHWMQLLEIILA 143 (380)
T ss_pred ccccccee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhccccccCHHHHHHHHHHHHh
Confidence 78888888 66 4999999999999999999999899999999998 9999999999887655432 5677788899999
Q ss_pred HHhCCCcEEEEEccccchhh--hhhhhcCCEEEEe--CCeEEeccccccCC-CCCccHHHHHhhcch-HHHHHHhhcCCc
Q 017189 96 MATYTKPQVSILNGIVMGGG--AGVSIHGRFRVAT--ENSVFAMPETALGL-FPDIGASYFLSRLPG-FFGEYVGLTGAR 169 (375)
Q Consensus 96 i~~~~kPvIAavnG~a~GgG--~~Lala~D~ria~--~~a~f~~pe~~~G~-~p~~g~~~~l~rl~g-~~a~~l~ltG~~ 169 (375)
.++++.|+.+++||++-.|| +.++.+|+|++.. ..-..+..+..+|+ +|++-.- .+-..+| +.+.+-+--|.-
T Consensus 144 ~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD-~~~t~fGf~~g~~~L~d~~g 222 (380)
T KOG1683|consen 144 LYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLID-SLITKFGFRVGERALADGVG 222 (380)
T ss_pred cCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHH-HHHHhcCccccHHHHhhccC
Confidence 99999999999999999888 8899999999998 44555788888885 4444322 2223335 445555667888
Q ss_pred cCHHHHHHcCccceecCC
Q 017189 170 LDGAEMRACGLATHFVPS 187 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~ 187 (375)
++..||.+-|+++.+.+.
T Consensus 223 fdv~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 223 FDVAEALAVGLGDEIGPR 240 (380)
T ss_pred ccHHHHHhhccchhccch
Confidence 999999999999999985
|
|
| >PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.53 E-value=1e-06 Score=79.63 Aligned_cols=138 Identities=18% Similarity=0.124 Sum_probs=86.4
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcccc
Q 017189 32 ALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIV 111 (375)
Q Consensus 32 al~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a 111 (375)
.++..+...+...|..++.++..+-|.|.=. |.|+|+.. ...++..|...+.|+++.+.|.|
T Consensus 39 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~In----SpGG~v~~--------------g~~I~d~i~~~~~~v~t~~~G~a 100 (200)
T PRK00277 39 EVEDHMANLIVAQLLFLEAEDPDKDIYLYIN----SPGGSVTA--------------GLAIYDTMQFIKPDVSTICIGQA 100 (200)
T ss_pred EECHHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCcHHH--------------HHHHHHHHHhcCCCEEEEEEeEe
Confidence 3788999999999998886543333333211 22333221 12244456677889999999999
Q ss_pred chhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccH----H-----------HHHhhcch---HHHHHHhhcCCccC
Q 017189 112 MGGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGA----S-----------YFLSRLPG---FFGEYVGLTGARLD 171 (375)
Q Consensus 112 ~GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~----~-----------~~l~rl~g---~~a~~l~ltG~~i~ 171 (375)
.+.|..|+++++ .|++.++++|.+....-|......- . ..+....| .....++-.+.-++
T Consensus 101 aS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~~~~~ls 180 (200)
T PRK00277 101 ASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKDTDRDNFMS 180 (200)
T ss_pred ccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhCCcccc
Confidence 999999988753 5777777766655443221100000 0 11222223 12445556677899
Q ss_pred HHHHHHcCccceecCC
Q 017189 172 GAEMRACGLATHFVPS 187 (375)
Q Consensus 172 A~eA~~~GLv~~vv~~ 187 (375)
|+||+++||||+|+.+
T Consensus 181 a~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 181 AEEAKEYGLIDEVLTK 196 (200)
T ss_pred HHHHHHcCCccEEeec
Confidence 9999999999999975
|
|
| >PRK10949 protease 4; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.5e-06 Score=89.20 Aligned_cols=157 Identities=15% Similarity=0.127 Sum_probs=102.0
Q ss_pred eCCEEEEEEcCC-----CCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHH
Q 017189 16 TSFVRILTLNRP-----RQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF 90 (375)
Q Consensus 16 ~~~v~~itlnrp-----~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 90 (375)
.+.|++|+++.+ ...+.++. +.+.+.|+.+..|++|++|||+-.. .|+... ..+.++
T Consensus 325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrInS----pGGs~~-----------ase~i~ 386 (618)
T PRK10949 325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVNS----PGGSVT-----------ASEVIR 386 (618)
T ss_pred CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEecC----CCCcHH-----------HHHHHH
Confidence 567888888732 22234443 5677888899999999999998653 222211 112334
Q ss_pred HHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecccc------------ccCCCCCccHH---------
Q 017189 91 ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET------------ALGLFPDIGAS--------- 149 (375)
Q Consensus 91 ~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~------------~~G~~p~~g~~--------- 149 (375)
+.+.++....||||+.+.|.|.-||.-++++||.++|.+.+..+.--+ ++|+-+++..+
T Consensus 387 ~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~~~~~~ 466 (618)
T PRK10949 387 AELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLADVSIT 466 (618)
T ss_pred HHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccCCcccc
Confidence 445555667899999999999999999999999999998664333211 34443221111
Q ss_pred --------HHHhhcc-----------------hHHHHHHhhcCCccCHHHHHHcCccceecCCccH
Q 017189 150 --------YFLSRLP-----------------GFFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 150 --------~~l~rl~-----------------g~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
..+...+ ......-+..|+.+++++|++.||||++-.-++.
T Consensus 467 ~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG~~~~a 532 (618)
T PRK10949 467 KALPPEFQQMMQLSIENGYKRFITLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDA 532 (618)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCCCHHHH
Confidence 0111111 1111222568999999999999999999765443
|
|
| >PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.5e-06 Score=75.87 Aligned_cols=136 Identities=17% Similarity=0.149 Sum_probs=94.5
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcccc
Q 017189 32 ALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIV 111 (375)
Q Consensus 32 al~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a 111 (375)
.++..+..++.+.|..++..+..+.|+|.=. |.|+++.. ...++..|..++.|+++.+.|.|
T Consensus 43 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~~--------------g~~I~d~i~~~~~~v~t~~~G~a 104 (207)
T PRK12553 43 QVDDASANDVMAQLLVLESIDPDRDITLYIN----SPGGSVTA--------------GDAIYDTIQFIRPDVQTVCTGQA 104 (207)
T ss_pred eECHHHHHHHHHHHHHHHhCCCCCCEEEEEe----CCCCcHHH--------------HHHHHHHHHhcCCCcEEEEEeeh
Confidence 3789999999999999987543343333211 23333321 12345566778889999999999
Q ss_pred chhhhhhhhcCC--EEEEeCCeEEecccccc-CCCCCccHH------------------HHHhhcch-H--HHHHHhhcC
Q 017189 112 MGGGAGVSIHGR--FRVATENSVFAMPETAL-GLFPDIGAS------------------YFLSRLPG-F--FGEYVGLTG 167 (375)
Q Consensus 112 ~GgG~~Lala~D--~ria~~~a~f~~pe~~~-G~~p~~g~~------------------~~l~rl~g-~--~a~~l~ltG 167 (375)
.+.|.-|+++|| .|++.++++|.+..... |.. .|-. ..+...-| . ....++-.+
T Consensus 105 aSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~~--~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~i~~~~~~~ 182 (207)
T PRK12553 105 ASAGAVLLAAGTPGKRFALPNARILIHQPSLGGGI--RGQASDLEIQAREILRMRERLERILAEHTGQSVEKIRKDTDRD 182 (207)
T ss_pred hhHHHHHHHcCCcCcEEECCCchhhhcCccccCCC--ccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcC
Confidence 999999999999 59999999999877643 211 1111 11222234 1 245566678
Q ss_pred CccCHHHHHHcCccceecCC
Q 017189 168 ARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~ 187 (375)
.-++|+||+++||||+++++
T Consensus 183 ~~lta~EA~e~GliD~I~~~ 202 (207)
T PRK12553 183 KWLTAEEAKDYGLVDQIITS 202 (207)
T ss_pred ccccHHHHHHcCCccEEcCc
Confidence 88999999999999999976
|
|
| >PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=8.1e-05 Score=69.63 Aligned_cols=138 Identities=14% Similarity=0.111 Sum_probs=95.7
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 30 LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 30 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
..+++++-.....+.++.+++.. +-+|-|.-.++++. |.+-.. ....+.+.+++..+....+|+|+.|-|
T Consensus 76 ~G~~~~~g~rKa~R~~~lA~~~~-lPvV~lvDtpGa~~-g~~aE~--------~G~~~~ia~~~~~~s~~~VP~IsVI~G 145 (256)
T PRK12319 76 FGQPHPEGYRKALRLMKQAEKFG-RPVVTFINTAGAYP-GVGAEE--------RGQGEAIARNLMEMSDLKVPIIAIIIG 145 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCcCC-CHhHHh--------ccHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 45788999999999999888753 55555544433443 332110 112345556677778899999999999
Q ss_pred ccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch--HHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 110 IVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG--FFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 110 ~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
.|.|||......||+++|.+++.|+ +.++-|+...+.+-.. ..+.+.+ .+++.++.+.|+||+|+++
T Consensus 146 ~~~gGgA~a~~~~D~v~m~~~a~~~-------v~~pe~~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD~ii~e 214 (256)
T PRK12319 146 EGGSGGALALAVADQVWMLENTMYA-------VLSPEGFASILWKDGSRATEAAELM----KITAGELLEMGVVDKVIPE 214 (256)
T ss_pred CcCcHHHHHhhcCCEEEEecCceEE-------EcCHHHHHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCcEecCC
Confidence 9999988877899999999998765 4444444444443322 2233332 7799999999999999985
Q ss_pred c
Q 017189 188 S 188 (375)
Q Consensus 188 ~ 188 (375)
.
T Consensus 215 ~ 215 (256)
T PRK12319 215 H 215 (256)
T ss_pred C
Confidence 3
|
|
| >cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.8e-06 Score=72.92 Aligned_cols=134 Identities=19% Similarity=0.168 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+..++...|..+..++..+.|+|.=. |.|+|+.. ...+...|...+.|+++.+.|.|.
T Consensus 18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~in----SpGG~v~~--------------~~~i~~~l~~~~~~v~t~~~g~aa 79 (171)
T cd07017 18 IDDEVANLIIAQLLYLESEDPKKPIYLYIN----SPGGSVTA--------------GLAIYDTMQYIKPPVSTICLGLAA 79 (171)
T ss_pred EcHHHHHHHHHHHHHHHccCCCCceEEEEE----CCCCCHHH--------------HHHHHHHHHhcCCCEEEEEEeEeh
Confidence 678889999999999998765555544321 23333321 122444556678999999999999
Q ss_pred hhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccH---------------HHHHhhcch-H--HHHHHhhcCCccCH
Q 017189 113 GGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGA---------------SYFLSRLPG-F--FGEYVGLTGARLDG 172 (375)
Q Consensus 113 GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~---------------~~~l~rl~g-~--~a~~l~ltG~~i~A 172 (375)
++|.-+++++| .|++.++++|.+.+...+..-...- ...+....| . ....++-.+.-++|
T Consensus 80 S~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~~~~~lta 159 (171)
T cd07017 80 SMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTDRDRYMSA 159 (171)
T ss_pred hHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhCCccccH
Confidence 99999999999 7999999999988876554322100 001111113 1 23455567788999
Q ss_pred HHHHHcCcccee
Q 017189 173 AEMRACGLATHF 184 (375)
Q Consensus 173 ~eA~~~GLv~~v 184 (375)
+||+++||||+|
T Consensus 160 ~EA~e~GiiD~V 171 (171)
T cd07017 160 EEAKEYGLIDKI 171 (171)
T ss_pred HHHHHcCCCccC
Confidence 999999999975
|
Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ |
| >CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.7e-05 Score=73.66 Aligned_cols=139 Identities=13% Similarity=0.101 Sum_probs=94.1
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 30 LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 30 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
..+++++-.....+.++.+++.. +-+|-|.-.+++++ |.+-.+ ....+.+.+.+..+....+|+|++|-|
T Consensus 132 ~G~~~p~g~rKa~Rlm~lA~~f~-lPIItlvDTpGA~~-G~~AE~--------~G~~~aiar~l~~~a~~~VP~IsVViG 201 (322)
T CHL00198 132 FGMPSPGGYRKALRLMKHANKFG-LPILTFIDTPGAWA-GVKAEK--------LGQGEAIAVNLREMFSFEVPIICTIIG 201 (322)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCc-CHHHHH--------HhHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 45788999999999999988753 44555444334443 432211 112344555666778899999999999
Q ss_pred ccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 110 IVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 110 ~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
.|.|||.-....||+++|.+++.|+ +.++-|+...|.+-.. ++.+ +....+++|+++++.|+||+|+|.
T Consensus 202 eggsGGAlal~~aD~V~m~e~a~~s-------VisPEg~a~Il~~d~~-~a~~-aA~~~~ita~dL~~~giiD~ii~E 270 (322)
T CHL00198 202 EGGSGGALGIGIGDSIMMLEYAVYT-------VATPEACAAILWKDSK-KSLD-AAEALKITSEDLKVLGIIDEIIPE 270 (322)
T ss_pred cccHHHHHhhhcCCeEEEeCCeEEE-------ecCHHHHHHHHhcchh-hHHH-HHHHcCCCHHHHHhCCCCeEeccC
Confidence 9988886555569999999999876 4444444545544332 1222 123457999999999999999984
|
|
| >PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.28 E-value=5.2e-06 Score=73.84 Aligned_cols=142 Identities=19% Similarity=0.259 Sum_probs=92.9
Q ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCc-e-EEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 21 ILTLNRPRQLNALSAQMISRLLELFQRYETDSNV-K-LLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 21 ~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~v-r-~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
+|.|+.| ++.++...+...|..++..+.. . .|.|.+ .|+|+.. ...+...|..
T Consensus 18 ~i~l~g~-----I~~~~~~~~~~~L~~l~~~~~~~~i~i~INS------pGG~v~~--------------g~~i~~~i~~ 72 (182)
T PF00574_consen 18 IIFLNGP-----IDEESANRLISQLLYLENEDKNKPINIYINS------PGGDVDA--------------GLAIYDAIRS 72 (182)
T ss_dssp EEEEESS-----BSHHHHHHHHHHHHHHHHHTSSSEEEEEEEE------CEBCHHH--------------HHHHHHHHHH
T ss_pred EEEECCc-----cCHHHHHHHHHHHHHHhccCCCceEEEEEcC------CCCccHH--------------HHHHHHHHHh
Confidence 3555554 7899999999998888533222 2 223344 4444422 2345667788
Q ss_pred CCCcEEEEEccccchhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHHH---------------HHhhcch-H--
Q 017189 99 YTKPQVSILNGIVMGGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGASY---------------FLSRLPG-F-- 158 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~~---------------~l~rl~g-~-- 158 (375)
++.|+++.+.|.|.+.|.-++++|+. |++.+++.|.+.+...+......-.. .+....| .
T Consensus 73 ~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~ 152 (182)
T PF00574_consen 73 SKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKE 152 (182)
T ss_dssp SSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HH
T ss_pred cCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHH
Confidence 89999999999999999999999999 89999999999888655532111100 0111112 1
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
....++-...-++|+||+++||||+|+.+
T Consensus 153 ~i~~~~~~~~~l~a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 153 EIEELMDRDTWLSAEEALEYGIIDEIIES 181 (182)
T ss_dssp HHHHHCSSTEEEEHHHHHHHTSSSEEESS
T ss_pred HHHHHHhCCccccHHHHHHcCCCCEeccC
Confidence 12444445555899999999999999864
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A .... |
| >PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.4e-05 Score=70.50 Aligned_cols=137 Identities=16% Similarity=0.139 Sum_probs=89.4
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+...+.+.|..++..+..+.|+|.=. |.|+++.. ...++..|...+.||++.+.|.|.
T Consensus 32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~a--------------g~aI~d~i~~~~~~V~t~v~G~Aa 93 (197)
T PRK14512 32 INKDLSELFQEKILLLEALDSKKPIFVYID----SEGGDIDA--------------GFAIFNMIRFVKPKVFTIGVGLVA 93 (197)
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHHH--------------HHHHHHHHHhCCCCEEEEEEeeeH
Confidence 778899999999988876333333333211 33333321 123455667788999999999999
Q ss_pred hhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHH---------------HHHhhcch---HHHHHHhhcCCccCH
Q 017189 113 GGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGAS---------------YFLSRLPG---FFGEYVGLTGARLDG 172 (375)
Q Consensus 113 GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~---------------~~l~rl~g---~~a~~l~ltG~~i~A 172 (375)
+.|.-|+++||- |++.++++|.+....-|+.....-. ..++..-| .....++-...-++|
T Consensus 94 SaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~~d~~lta 173 (197)
T PRK14512 94 SAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTDRDFWLDS 173 (197)
T ss_pred hHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhhcCcccCH
Confidence 999999999985 9999999887655433321111100 00111123 123444455567999
Q ss_pred HHHHHcCccceecCC
Q 017189 173 AEMRACGLATHFVPS 187 (375)
Q Consensus 173 ~eA~~~GLv~~vv~~ 187 (375)
+||+++||||+|++.
T Consensus 174 ~EA~~yGliD~I~~~ 188 (197)
T PRK14512 174 SSAVKYGLVFEVVET 188 (197)
T ss_pred HHHHHcCCccEeecC
Confidence 999999999999976
|
|
| >PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00022 Score=70.18 Aligned_cols=136 Identities=17% Similarity=0.108 Sum_probs=91.8
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
.+++++-.....+.++.++... +=+|-|.-.++++ .|.+..+ ....+.+.+.+..+....+|+|+.|-|.
T Consensus 200 G~~~peGyRKAlR~mklAekf~-lPIVtLVDTpGA~-pG~~AEe--------~Gqa~aIAr~l~ams~l~VPiISVViGe 269 (431)
T PLN03230 200 AMPQPNGYRKALRFMRHAEKFG-FPILTFVDTPGAY-AGIKAEE--------LGQGEAIAFNLREMFGLRVPIIATVIGE 269 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcC-CCHHHHH--------HhHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 4688999999999999988753 4555554333333 3332222 1123445566777889999999999999
Q ss_pred cchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch--HHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 111 VMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG--FFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 111 a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
+.+||......||+++|.+++.++ +.++-|+...|.+-.. ..+.+ ...++|.++.+.|+||+|++.
T Consensus 270 GgSGGAlalg~aD~VlMle~A~ys-------VisPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~II~E 337 (431)
T PLN03230 270 GGSGGALAIGCGNRMLMMENAVYY-------VASPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDEIVPE 337 (431)
T ss_pred CCcHHHHHhhcCCEEEEecCCEEE-------ecCHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeEeccC
Confidence 966664444468999999998755 4444444444444322 23333 338999999999999999985
|
|
| >CHL00028 clpP ATP-dependent Clp protease proteolytic subunit | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.4e-05 Score=68.34 Aligned_cols=136 Identities=13% Similarity=0.158 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEE--EeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLI--LKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vV--ltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
+|.++..++...|-.++.++..+-|. |.+.| +|+.. ...++..|...+.||.+.+.|.
T Consensus 39 i~~~~a~~ii~~ll~L~~~~~~~~I~l~INSpG------G~v~~--------------g~aIyd~m~~~~~~V~Tv~~G~ 98 (200)
T CHL00028 39 VDDEIANQLIGLMVYLSIEDDTKDLYLFINSPG------GSVIS--------------GLAIYDTMQFVKPDVHTICLGL 98 (200)
T ss_pred ecHHHHHHHHHHHHHHhccCCCCCEEEEEeCCC------cchhh--------------HHHHHHHHHhcCCCEEEEEEEe
Confidence 89999999999999988544333333 33433 33221 1235556778889999999999
Q ss_pred cchhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccH----------------HHHHhhcch-H--HHHHHhhcCCc
Q 017189 111 VMGGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGA----------------SYFLSRLPG-F--FGEYVGLTGAR 169 (375)
Q Consensus 111 a~GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~----------------~~~l~rl~g-~--~a~~l~ltG~~ 169 (375)
|.+.|.-|++++| .|++.++++|.+.....|..-+... ...++...| . ....++-...-
T Consensus 99 AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i~~~~~r~~~ 178 (200)
T CHL00028 99 AASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVISEDMERDVF 178 (200)
T ss_pred hHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcCcc
Confidence 9999999999999 6999999999987776553211110 011111123 1 23445555566
Q ss_pred cCHHHHHHcCccceecCCc
Q 017189 170 LDGAEMRACGLATHFVPSS 188 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~ 188 (375)
++|+||+++||||+|+.+.
T Consensus 179 lta~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 179 MSATEAKAYGIVDLVAVNN 197 (200)
T ss_pred CCHHHHHHcCCCcEEeecC
Confidence 9999999999999999764
|
|
| >TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP | Back alignment and domain information |
|---|
Probab=98.12 E-value=6.2e-05 Score=67.56 Aligned_cols=136 Identities=16% Similarity=0.101 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+..++...|..++.++..+-|+|.=. |.|+|+.. ...++..|...+.|+...+.|.|.
T Consensus 35 I~~~~~~~ii~~L~~l~~~~~~~~i~l~In----SpGG~v~~--------------g~~I~d~l~~~~~~v~t~~~G~Aa 96 (191)
T TIGR00493 35 VNDSVANLIVAQLLFLEAEDPEKDIYLYIN----SPGGSITA--------------GLAIYDTMQFIKPDVSTICIGQAA 96 (191)
T ss_pred EChHHHHHHHHHHHHhhccCCCCCEEEEEE----CCCCCHHH--------------HHHHHHHHHhcCCCEEEEEEEeec
Confidence 678888899999888887554343433211 23444321 122444566677788888899999
Q ss_pred hhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccHH---------------HHHhhcch---HHHHHHhhcCCccCH
Q 017189 113 GGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGAS---------------YFLSRLPG---FFGEYVGLTGARLDG 172 (375)
Q Consensus 113 GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~~---------------~~l~rl~g---~~a~~l~ltG~~i~A 172 (375)
+.|.-|++++| .|++.++++|.+.+..-|......-. ..+....| .....++-.+.-++|
T Consensus 97 SaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~~i~~~~~~~~~lta 176 (191)
T TIGR00493 97 SMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLEQIEKDTERDFFMSA 176 (191)
T ss_pred cHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhCCccCcH
Confidence 99998888766 69999999999877654432111111 11222223 124556667778999
Q ss_pred HHHHHcCccceecC
Q 017189 173 AEMRACGLATHFVP 186 (375)
Q Consensus 173 ~eA~~~GLv~~vv~ 186 (375)
+||+++||||+++.
T Consensus 177 ~EA~~~GliD~ii~ 190 (191)
T TIGR00493 177 EEAKEYGLIDSVLT 190 (191)
T ss_pred HHHHHcCCccEEec
Confidence 99999999999874
|
This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model. |
| >PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00011 Score=76.72 Aligned_cols=139 Identities=14% Similarity=0.069 Sum_probs=94.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 30 LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 30 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
..+++++-++-..+.++.++... +-+|-|.=.+++++ |.+.... ...+.+.+.+..+....+|+|++|-|
T Consensus 220 fG~~~peGyRKAlRlmkLAekfg-LPIVtLVDTpGA~p-G~~AEe~--------Gq~~aIArnl~amasl~VP~ISVViG 289 (762)
T PLN03229 220 FGMPTPHGYRKALRMMYYADHHG-FPIVTFIDTPGAYA-DLKSEEL--------GQGEAIAHNLRTMFGLKVPIVSIVIG 289 (762)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCcCC-CchhHHH--------hHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 45778888999999998888753 44454443333343 3332221 12344556677788899999999999
Q ss_pred ccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 110 IVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 110 ~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
.|.|||......||+++|.+++.|+ +.++-|+...+.+-.. .+.. +.....|+|++.+++|+||.|+|.
T Consensus 290 eggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~-~A~e-AAe~lkiTa~dL~~lGiiD~IIpE 358 (762)
T PLN03229 290 EGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAK-AAPK-AAEKLRITAQELCRLQIADGIIPE 358 (762)
T ss_pred CcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCcc-cHHH-HHHHcCCCHHHHHhCCCCeeeccC
Confidence 9988887777779999999988754 4444455555544433 1111 223457999999999999999984
|
|
| >PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00012 Score=70.28 Aligned_cols=139 Identities=14% Similarity=0.121 Sum_probs=95.6
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 30 LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 30 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
..+++++-.+...+.++.++.- ++-+|-|.-.+++++ |.+-.+ ....+.+.+++..+....+|+|+.|-|
T Consensus 129 ~G~~~peg~rKa~R~m~lA~~f-~lPIVtlvDTpGa~~-G~~aE~--------~G~~~aia~~l~~~a~~~VP~IsVIiG 198 (319)
T PRK05724 129 FGMPRPEGYRKALRLMKMAEKF-GLPIITFIDTPGAYP-GIGAEE--------RGQSEAIARNLREMARLKVPIICTVIG 198 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-CHHHHh--------ccHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 4578899999999999988875 455565554444443 432221 112345566777888999999999999
Q ss_pred ccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 110 IVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 110 ~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
.|.|||.-....||+++|.+++.|+ ++++-|+...+.+-.. .+.... .-..+++.++.+.|+||.|++.
T Consensus 199 eg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~-~a~~aa-e~~~ita~~l~~~g~iD~II~E 267 (319)
T PRK05724 199 EGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDAS-KAPEAA-EAMKITAQDLKELGIIDEIIPE 267 (319)
T ss_pred CccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCch-hHHHHH-HHcCCCHHHHHHCCCceEeccC
Confidence 9987776555569999999888754 5555555555555433 122211 1456899999999999999985
|
|
| >TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00015 Score=69.57 Aligned_cols=137 Identities=15% Similarity=0.102 Sum_probs=92.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 30 LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 30 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
..+++++-.....+.++.+++- .+-+|-|.-.+++++ |.+..+. ...+.+.+++..+....+|+|++|-|
T Consensus 129 ~G~~~p~g~rKa~R~m~lA~~f-~iPvVtlvDTpGa~~-g~~aE~~--------G~~~aia~~l~a~s~~~VP~IsVViG 198 (316)
T TIGR00513 129 FGMPAPEGYRKALRLMKMAERF-KMPIITFIDTPGAYP-GIGAEER--------GQSEAIARNLREMARLGVPVICTVIG 198 (316)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCCCC-CHHHHHH--------HHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 3578899999999999988875 345555544333333 3322211 12344556677778899999999999
Q ss_pred ccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch--HHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 110 IVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG--FFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 110 ~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
.|.|||......||+++|.+++.++ ++++-|+...+.+-.. ..+.+. ..+++.++.+.|+||.|+|.
T Consensus 199 eggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~~~a~~aae~----~~~ta~~l~~~G~iD~II~e 267 (316)
T TIGR00513 199 EGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDASKAPKAAEA----MKITAPDLKELGLIDSIIPE 267 (316)
T ss_pred ccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccchhhHHHHHHH----ccCCHHHHHHCCCCeEeccC
Confidence 9977776544569999999998765 4544555555554322 222221 56789999999999999984
|
The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta. |
| >PRK11778 putative inner membrane peptidase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00013 Score=70.59 Aligned_cols=156 Identities=10% Similarity=0.021 Sum_probs=92.9
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL 95 (375)
Q Consensus 16 ~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~ 95 (375)
++.|++|.|+.+=..+ -...+.+++...+..+..+ .+|||+-. |.|+..... ......+.+
T Consensus 89 ~~~v~VI~~~G~I~~~-~~~~l~e~i~a~l~~A~~~---~aVvLrid----SpGG~v~~s-----------~~a~~~l~~ 149 (330)
T PRK11778 89 KPRLFVLDFKGDIDAS-EVESLREEITAILAVAKPG---DEVLLRLE----SPGGVVHGY-----------GLAASQLQR 149 (330)
T ss_pred CCeEEEEEEEEEECCC-cchhhHHHHHHHHHhccCC---CeEEEEEe----CCCCchhHH-----------HHHHHHHHH
Confidence 4678888888542111 1123445666656555433 46777654 222222110 001111344
Q ss_pred HHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecccc------------ccCCCCC---------ccHH-----
Q 017189 96 MATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET------------ALGLFPD---------IGAS----- 149 (375)
Q Consensus 96 i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~------------~~G~~p~---------~g~~----- 149 (375)
+....||+|+.+++.|.-||+.++++||.++|.+.+.++.-.+ ++|+-+. .+..
T Consensus 150 lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~~~~~~~lLeKlGI~~evi~aG~yK~a~~pf~~~s 229 (330)
T PRK11778 150 LRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQIPNFHRLLKKHDIDVELHTAGEYKRTLTLFGENT 229 (330)
T ss_pred HHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeeeccCHHHHHHHCCCceEEEEecCccCCCCCCCCCC
Confidence 5677899999999999999999999999999999887665433 1222110 0000
Q ss_pred ----HHHhhcc---------------hHHHHHHhhcCCccCHHHHHHcCccceecCCccH
Q 017189 150 ----YFLSRLP---------------GFFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 150 ----~~l~rl~---------------g~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
..+...+ +.....-+.+|+.++|++|++.||||++...+++
T Consensus 230 ee~Re~~q~~Ld~~y~~F~~~Va~~R~~l~~~~va~G~v~~g~~Al~~GLVD~Ig~~dd~ 289 (330)
T PRK11778 230 EEGREKFREELEETHQLFKDFVQRYRPQLDIDKVATGEHWYGQQALELGLVDEIQTSDDY 289 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHhCCCcCHHHHHHCCCCCcCCCHHHH
Confidence 0011111 1011223468999999999999999999987665
|
|
| >COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.97 E-value=8.8e-05 Score=71.83 Aligned_cols=136 Identities=18% Similarity=0.147 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhh
Q 017189 38 ISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117 (375)
Q Consensus 38 ~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~ 117 (375)
.+.+.+.|+.+..|+++++|||.=. |-|+..- -...+++.++++..-. ||++.|++.|.-||..
T Consensus 82 ~~~~~~~l~~~~~~~~vk~vvL~in----SPGG~v~-----------as~~i~~~l~~l~~~~-PV~v~v~~~AASGGY~ 145 (317)
T COG0616 82 GDDIEEILRAARADPSVKAVVLRIN----SPGGSVV-----------ASELIARALKRLRAKK-PVVVSVGGYAASGGYY 145 (317)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEEE----CcCCchh-----------HHHHHHHHHHHHhhcC-CEEEEECCeecchhhh
Confidence 5667777888889999999998743 2233221 1134445555555554 9999999999999999
Q ss_pred hhhcCCEEEEeCCeEEeccccccCCCCCcc-------------------------------HHHHHhhcc----------
Q 017189 118 VSIHGRFRVATENSVFAMPETALGLFPDIG-------------------------------ASYFLSRLP---------- 156 (375)
Q Consensus 118 Lala~D~ria~~~a~f~~pe~~~G~~p~~g-------------------------------~~~~l~rl~---------- 156 (375)
++++||.+||++.+..|---+..+. |... ....+...+
T Consensus 146 IA~aAd~I~a~p~si~GSIGVi~~~-~~~~~l~~k~Gv~~~~~~ag~~k~~~~~~~~~t~e~~~~~q~~~~e~y~~F~~~ 224 (317)
T COG0616 146 IALAADKIVADPSSITGSIGVISGA-PNFEELLEKLGVEKEVITAGEYKDILSPFRPLTEEEREILQKEIDETYDEFVDK 224 (317)
T ss_pred hhccCCEEEecCCceeeeceeEEec-CCHHHHHHhcCCceeeeeccccccccCcccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998866543332221 1110 000011110
Q ss_pred -----h--HHHHHHhhcCCccCHHHHHHcCccceecCCccH
Q 017189 157 -----G--FFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 157 -----g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
+ .....-+.+|+.+++++|.+.||||++...++.
T Consensus 225 V~~~R~~~~~~~~~~a~g~v~~g~~A~~~gLVDelg~~~~a 265 (317)
T COG0616 225 VAEGRGLSDEAVDKLATGRVWTGQQALELGLVDELGGLDDA 265 (317)
T ss_pred HHhcCCCChhHHHHHhccceecHHHhhhcCCchhcCCHHHH
Confidence 1 112235689999999999999999999876543
|
|
| >TIGR03133 malonate_beta malonate decarboxylase, beta subunit | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00044 Score=65.20 Aligned_cols=149 Identities=11% Similarity=0.095 Sum_probs=91.1
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCC----CceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHH
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDS----NVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL 95 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~----~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~ 95 (375)
..+-.+..-..-++....-..+.++++.+.+|. .+-+|.|.-+|++ -+.+-.... ..+ .........
T Consensus 62 ~v~a~D~t~~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSgGa-----RlqEg~~~L---~~~-a~i~~~~~~ 132 (274)
T TIGR03133 62 VVAAQEGRFQGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDTGGV-----RLQEANAGL---IAI-AEIMRAILD 132 (274)
T ss_pred EEEEECCCccCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcCCCc-----ChhhhHHHH---HHH-HHHHHHHHH
Confidence 334444444556788888899999998887622 2346666544433 222210000 011 112222233
Q ss_pred HHhCCCcEEEEEccc--cchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H--HHHHHhhcCCcc
Q 017189 96 MATYTKPQVSILNGI--VMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F--FGEYVGLTGARL 170 (375)
Q Consensus 96 i~~~~kPvIAavnG~--a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~--~a~~l~ltG~~i 170 (375)
+... .|+|+.+-|+ |+||+..++..||++||++++++++. +...+....| . ....-.|.-+.+
T Consensus 133 ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~a-----------GP~VIe~~~G~e~~~~~d~~l~~~~l 200 (274)
T TIGR03133 133 ARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRALVWRTT 200 (274)
T ss_pred HhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEecc-----------CHHHHHHhcCCCccCHHHhccccccc
Confidence 3444 9999999999 89999999999999999998877652 1222222223 1 133344455556
Q ss_pred CHHHHHHcCccceecCCcc
Q 017189 171 DGAEMRACGLATHFVPSSR 189 (375)
Q Consensus 171 ~A~eA~~~GLv~~vv~~~~ 189 (375)
.+...+..|++|.+++++.
T Consensus 201 GG~~~~~sG~~D~~v~dd~ 219 (274)
T TIGR03133 201 GGKHRFLSGDADVLVEDDV 219 (274)
T ss_pred chHhHhhcccceEEeCCHH
Confidence 7777888999999998854
|
Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase. |
| >PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00026 Score=64.78 Aligned_cols=136 Identities=11% Similarity=0.065 Sum_probs=88.5
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCce--EEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 32 ALSAQMISRLLELFQRYETDSNVK--LLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 32 al~~~~~~eL~~~l~~~~~d~~vr--~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
.++..+..++...|..++..+.-+ .|.|.+.|+...+| ..++..|...+-||.+.+.|
T Consensus 62 ~Idd~~a~~i~aqLl~L~~~~~~~~I~lyINSpGGsv~aG--------------------laIyd~m~~~~~~V~tv~~G 121 (221)
T PRK14514 62 QIDDYTANTIQAQLLYLDSVDPGKDISIYINSPGGSVYAG--------------------LGIYDTMQFISSDVATICTG 121 (221)
T ss_pred EEcHHHHHHHHHHHHHHhccCCCCCEEEEEECCCcchhhH--------------------HHHHHHHHhcCCCEEEEEEE
Confidence 367888888888777766432112 22233433322221 23455677788899999999
Q ss_pred ccchhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHHH---------------HHhhcch-H--HHHHHhhcCCc
Q 017189 110 IVMGGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGASY---------------FLSRLPG-F--FGEYVGLTGAR 169 (375)
Q Consensus 110 ~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~~---------------~l~rl~g-~--~a~~l~ltG~~ 169 (375)
.|.+.|..|++++|. |++.++++|.+....-|......-.. .++...| . .....+-...-
T Consensus 122 ~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~~~rd~w 201 (221)
T PRK14514 122 MAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWADSDRDYW 201 (221)
T ss_pred EehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcCcc
Confidence 999999999999996 99999999987776544322111000 1111223 1 23445555667
Q ss_pred cCHHHHHHcCccceecCC
Q 017189 170 LDGAEMRACGLATHFVPS 187 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~ 187 (375)
++|+||+++||||+|+..
T Consensus 202 mtA~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 202 MTAQEAKEYGMIDEVLIK 219 (221)
T ss_pred CCHHHHHHcCCccEEeec
Confidence 999999999999999864
|
|
| >PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00039 Score=62.71 Aligned_cols=136 Identities=18% Similarity=0.195 Sum_probs=92.0
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCce--EEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 32 ALSAQMISRLLELFQRYETDSNVK--LLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 32 al~~~~~~eL~~~l~~~~~d~~vr--~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
.++.++...+...|..++.++.-+ -|.|.+.| +|+.. ...++..|...+-||...+.|
T Consensus 35 ~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~INSpG------G~v~~--------------GlaIyd~m~~~~~~V~Ti~~G 94 (201)
T PRK14513 35 PIESQMANTIVAQLLLLDSQNPEQEIQMYINCPG------GEVYA--------------GLAIYDTMRYIKAPVSTICVG 94 (201)
T ss_pred EEcHHHHHHHHHHHHHhhccCCCCCEEEEEECCC------Cchhh--------------HHHHHHHHHhcCCCEEEEEEe
Confidence 478899999988888887643222 22234433 33321 123555677788899999999
Q ss_pred ccchhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHHHH-----------------Hhhcch-H--HHHHHhhcC
Q 017189 110 IVMGGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGASYF-----------------LSRLPG-F--FGEYVGLTG 167 (375)
Q Consensus 110 ~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~~~-----------------l~rl~g-~--~a~~l~ltG 167 (375)
.|.+.|.-|++++|- |++.+++++-+....-|.. +....+ +.+..| . .-..++-..
T Consensus 95 ~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~~~~~rd 172 (201)
T PRK14513 95 IAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLLRDMERD 172 (201)
T ss_pred eehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhccC
Confidence 999999999999995 9999999998877765542 111111 112223 1 133444455
Q ss_pred CccCHHHHHHcCccceecCCcc
Q 017189 168 ARLDGAEMRACGLATHFVPSSR 189 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~ 189 (375)
.-++|+||+++||||+|+++..
T Consensus 173 ~~msa~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 173 YFMSPEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred cccCHHHHHHcCCCcEEeccCC
Confidence 5699999999999999997644
|
|
| >PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00043 Score=62.31 Aligned_cols=136 Identities=15% Similarity=0.077 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEE--EeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLI--LKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vV--ltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
++.++..++...|..++.++..+-|. |-+.| +|+.. ...++..|...+-||...+.|.
T Consensus 34 i~~~~a~~ii~~Ll~l~~~~~~~~I~l~INSpG------G~v~~--------------g~aIyd~m~~~~~~V~t~~~G~ 93 (196)
T PRK12551 34 VTSDSANRIVAQLLFLEAEDPEKDIYLYINSPG------GSVYD--------------GLGIFDTMQHVKPDVHTVCVGL 93 (196)
T ss_pred ecHHHHHHHHHHHHHhhccCCCCCEEEEEeCCC------cchhh--------------HHHHHHHHHhcCCCEEEEEEEE
Confidence 79999999999999888543223333 33333 33321 1234556677888999999999
Q ss_pred cchhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHHH---------------HHhhcch-H--HHHHHhhcCCcc
Q 017189 111 VMGGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGASY---------------FLSRLPG-F--FGEYVGLTGARL 170 (375)
Q Consensus 111 a~GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~~---------------~l~rl~g-~--~a~~l~ltG~~i 170 (375)
|.+.|..|++++|- |++.++++|.+....-|..-...-.. .+....| . ....++-...-+
T Consensus 94 AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~rd~~m 173 (196)
T PRK12551 94 AASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDRDFFM 173 (196)
T ss_pred ehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcCcCC
Confidence 99999999999985 88999999887776433221111000 0111123 1 134444555569
Q ss_pred CHHHHHHcCccceecCCc
Q 017189 171 DGAEMRACGLATHFVPSS 188 (375)
Q Consensus 171 ~A~eA~~~GLv~~vv~~~ 188 (375)
+|+||+++||||+|++..
T Consensus 174 sa~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 174 SPSEAVEYGLIDLVIDKR 191 (196)
T ss_pred CHHHHHHcCCCcEEeccC
Confidence 999999999999999764
|
|
| >PRK07189 malonate decarboxylase subunit beta; Reviewed | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.0015 Score=62.43 Aligned_cols=150 Identities=13% Similarity=0.139 Sum_probs=88.5
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCC----CceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHH
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDS----NVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY 94 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~----~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~ 94 (375)
|..+-.+..=..-++.......+.++++.+.++. -+-+|.|.-+|++ -+.+-.... ..+ ...+..+.
T Consensus 70 v~v~a~D~tf~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSGGa-----RlqEg~~~L---~~~-a~i~~~~~ 140 (301)
T PRK07189 70 VVVAAQEGRFMGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETGGV-----RLQEANAGL---AAI-AEIMRAIV 140 (301)
T ss_pred EEEEEECCCccCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCCCc-----CccchHHHH---HHH-HHHHHHHH
Confidence 3444444444567888899999999999887764 1556666554433 222110000 011 12222223
Q ss_pred HHHhCCCcEEEEEccc--cchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H--HHHHHhhcCCc
Q 017189 95 LMATYTKPQVSILNGI--VMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F--FGEYVGLTGAR 169 (375)
Q Consensus 95 ~i~~~~kPvIAavnG~--a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~--~a~~l~ltG~~ 169 (375)
.+... +|+|+.+-|. |+||+...+..||++||++++++++. +...+....| . ...+..+..+.
T Consensus 141 ~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla-----------GP~VIe~~~G~e~~d~~d~~~vw~~ 208 (301)
T PRK07189 141 DLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRALVWRT 208 (301)
T ss_pred HHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc-----------CHHHHHHhcCCcccCHHHhcccccc
Confidence 34444 9999999999 99999999999999999998877652 1212222122 0 12222222222
Q ss_pred cCHHHHHHcCccceecCCcc
Q 017189 170 LDGAEMRACGLATHFVPSSR 189 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~ 189 (375)
+.+......|.+|.+++++.
T Consensus 209 lGG~h~~~sG~~D~~v~dd~ 228 (301)
T PRK07189 209 TGGKHRYLSGLADALVDDDV 228 (301)
T ss_pred cCcceeeecccceEEeCCHH
Confidence 33334456899999998754
|
|
| >PRK05654 acetyl-CoA carboxylase subunit beta; Validated | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0026 Score=60.68 Aligned_cols=151 Identities=13% Similarity=0.153 Sum_probs=93.1
Q ss_pred eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY 94 (375)
Q Consensus 16 ~~~v~~itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~ 94 (375)
.|.-..|.-|.+. ...+++....+.+.++++.+.+. .+-+|.|.-+|++ -+.+ .... ..........+.
T Consensus 119 ~G~~V~v~a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsgGa-----rmqE---gi~s-L~~~ak~~~a~~ 188 (292)
T PRK05654 119 EGMPVVLAVMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASGGA-----RMQE---GLLS-LMQMAKTSAALK 188 (292)
T ss_pred CCEEEEEEEEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCc-----chhh---hhhH-HHhHHHHHHHHH
Confidence 3333334444444 66789999999999999998876 4677777755532 2211 0000 000112223334
Q ss_pred HHHhCCCcEEEEEccccchhhh-hhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHH
Q 017189 95 LMATYTKPQVSILNGIVMGGGA-GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGA 173 (375)
Q Consensus 95 ~i~~~~kPvIAavnG~a~GgG~-~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~ 173 (375)
++.....|.|+.+.|+|+||+. ..++.+|++||.++|.+++-..+ .+...++ ..+ .-+.-+++
T Consensus 189 ~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------vie~~~~---e~l--pe~~~~ae 252 (292)
T PRK05654 189 RLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGPR-----------VIEQTVR---EKL--PEGFQRAE 252 (292)
T ss_pred HHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCHH-----------HHHhhhh---hhh--hhhhcCHH
Confidence 4556679999999999999975 46778999999998877763221 1111111 111 11122566
Q ss_pred HHHHcCccceecCCccHHH
Q 017189 174 EMRACGLATHFVPSSRLAL 192 (375)
Q Consensus 174 eA~~~GLv~~vv~~~~l~~ 192 (375)
-+.+.|+||.||++.++..
T Consensus 253 ~~~~~G~vD~Vv~~~e~r~ 271 (292)
T PRK05654 253 FLLEHGAIDMIVHRRELRD 271 (292)
T ss_pred HHHhCCCCcEEECHHHHHH
Confidence 6778999999999988743
|
|
| >TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0027 Score=58.87 Aligned_cols=154 Identities=9% Similarity=0.003 Sum_probs=93.6
Q ss_pred CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHh-hcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHH
Q 017189 17 SFVRILTLNRPRQLNALSAQMISRLLELFQRY-ETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL 95 (375)
Q Consensus 17 ~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~-~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~ 95 (375)
|.-..|.=|.|.. .++.+-...+.+.+..+ +.+.++-+|.|.=..+ |-.|..-+.. ...+.+.++...
T Consensus 31 G~~V~vIa~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDtpG-~~~g~~aE~~--------G~~~a~A~l~~a 99 (238)
T TIGR03134 31 GGKVTVIGVVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDTPS-QAYGRREELL--------GINQALAHLAKA 99 (238)
T ss_pred CEEEEEEEECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeCCC-CCCCHHHHHH--------HHHHHHHHHHHH
Confidence 4434444455542 68878888888888885 4556666666654432 3333322211 122233334444
Q ss_pred H---HhCCCcEEEEEccccchhhh-hhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhc--CCc
Q 017189 96 M---ATYTKPQVSILNGIVMGGGA-GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLT--GAR 169 (375)
Q Consensus 96 i---~~~~kPvIAavnG~a~GgG~-~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~lt--G~~ 169 (375)
+ ...+.|+|+.|-|.++|||+ .+.+.+|.++|-+++. ++..+.-++...+.+-... ..++.-+ -..
T Consensus 100 ~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A~-------i~vm~~e~aa~I~~~~~~~-~~e~a~~~~~~a 171 (238)
T TIGR03134 100 LALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGAM-------VHVMDLESMARVTKRSVEE-LEALAKSSPVFA 171 (238)
T ss_pred HHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCcE-------EEecCHHHHHHHHccCHhH-HHHHHHhhhhhc
Confidence 4 45669999999999999886 5666688887776665 5566666666555544432 2222111 123
Q ss_pred cCHHHHHHcCccceecCCcc
Q 017189 170 LDGAEMRACGLATHFVPSSR 189 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~ 189 (375)
.+...+.++|+||.++++.+
T Consensus 172 ~~~~~~~~~G~vd~vi~~~~ 191 (238)
T TIGR03134 172 PGIENFVKLGGVHALLDVAD 191 (238)
T ss_pred cCHHHHHhCCCccEEeCCCC
Confidence 57778999999999998655
|
Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity. |
| >PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00065 Score=63.33 Aligned_cols=95 Identities=15% Similarity=0.197 Sum_probs=75.1
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
+.++.+...++.++++....+..+- ++|.. -|+++. .-.++...+.+.+.|+++.|++.
T Consensus 70 ~~I~i~dse~v~raI~~~~~~~~Id-Lii~T------pGG~v~--------------AA~~I~~~l~~~~~~v~v~VP~~ 128 (285)
T PF01972_consen 70 RYIDIDDSEFVLRAIREAPKDKPID-LIIHT------PGGLVD--------------AAEQIARALREHPAKVTVIVPHY 128 (285)
T ss_pred eeEcHhhHHHHHHHHHhcCCCCceE-EEEEC------CCCcHH--------------HHHHHHHHHHhCCCCEEEEECcc
Confidence 5688899999999999887765543 33433 333332 12345667788999999999999
Q ss_pred cchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCc
Q 017189 111 VMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDI 146 (375)
Q Consensus 111 a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~ 146 (375)
|+.||.-++|+||-++|.+.+.+|--..++|-.|..
T Consensus 129 A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~ 164 (285)
T PF01972_consen 129 AMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAA 164 (285)
T ss_pred cccHHHHHHHhCCeEEECCCCccCCCCccccCCChH
Confidence 999999999999999999999999999999887743
|
The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane |
| >TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0012 Score=69.26 Aligned_cols=84 Identities=8% Similarity=0.007 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhh
Q 017189 37 MISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGA 116 (375)
Q Consensus 37 ~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~ 116 (375)
.+.++.++++.+.+|+.|++|||.-.+ +.|+.+.. .+.+++.+..+....|||||..++++ -+|+
T Consensus 77 ~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~-----------~~ei~~ai~~fk~sgKpVvA~~~~~~-s~~Y 141 (584)
T TIGR00705 77 SLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPH-----------LVEIGSALSEFKDSGKPVYAYGTNYS-QGQY 141 (584)
T ss_pred CHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHH-----------HHHHHHHHHHHHhcCCeEEEEEcccc-chhh
Confidence 578999999999999999999998753 12333222 12344455566667899999988876 5789
Q ss_pred hhhhcCCEEEEeCCeEEec
Q 017189 117 GVSIHGRFRVATENSVFAM 135 (375)
Q Consensus 117 ~Lala~D~ria~~~a~f~~ 135 (375)
-|+.+||-+++.+.+.+++
T Consensus 142 ylAs~AD~I~~~p~G~v~~ 160 (584)
T TIGR00705 142 YLASFADEIILNPMGSVDL 160 (584)
T ss_pred hhhhhCCEEEECCCceEEe
Confidence 9999999999999877755
|
E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. |
| >PF01343 Peptidase_S49: Peptidase family S49 peptidase classification | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00015 Score=62.73 Aligned_cols=94 Identities=17% Similarity=0.105 Sum_probs=59.8
Q ss_pred HhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecccc------------ccCC---------CCCcc--------
Q 017189 97 ATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET------------ALGL---------FPDIG-------- 147 (375)
Q Consensus 97 ~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~------------~~G~---------~p~~g-------- 147 (375)
.+..|||||.++|.|..+|+-|+.+||-+++.+.+.++..-+ ++|+ ....+
T Consensus 3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~ 82 (154)
T PF01343_consen 3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE 82 (154)
T ss_dssp HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence 567899999999999999999999999999999887665433 1332 11111
Q ss_pred -HHHHHhhcc---------------h--HHHHHHhhcCCccCHHHHHHcCccceecCCccH
Q 017189 148 -ASYFLSRLP---------------G--FFGEYVGLTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 148 -~~~~l~rl~---------------g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
.-..+.+++ | .....-+..|..++|++|++.||||++-..+++
T Consensus 83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~~~~~ 143 (154)
T PF01343_consen 83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGTFDEA 143 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCCHHHH
Confidence 111111111 1 011122579999999999999999999876665
|
; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A. |
| >TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0074 Score=57.39 Aligned_cols=147 Identities=13% Similarity=0.163 Sum_probs=91.0
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
+.+..|..-..-+++....+.+.++++.+.+. .+-+|.|..+|++- +.+ ....-.. .......+.++...
T Consensus 123 ~v~a~D~~f~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSgGaR-----mqE---g~~sL~~-~ak~~~~~~~~~~~ 192 (285)
T TIGR00515 123 VVAVFDFAFMGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASGGAR-----MQE---ALLSLMQ-MAKTSAALAKMSER 192 (285)
T ss_pred EEEEEeccccCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCcc-----ccc---chhHHHh-HHHHHHHHHHHHcC
Confidence 33333433356789999999999999988765 56777777655431 111 0000001 11222233445566
Q ss_pred CCcEEEEEccccchhhh-hhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHHHHc
Q 017189 100 TKPQVSILNGIVMGGGA-GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRAC 178 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~-~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA~~~ 178 (375)
..|.|+++-|+|.||+. ..++.+|++||.++|.+++...+ .+...+| .. +.-+.-+|+-+.+.
T Consensus 193 ~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~---e~--lpe~~q~ae~~~~~ 256 (285)
T TIGR00515 193 GLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVR---EK--LPEGFQTSEFLLEH 256 (285)
T ss_pred CCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhc---Cc--cchhcCCHHHHHhC
Confidence 79999999999999975 46679999999999987763322 1111111 00 11112245557788
Q ss_pred CccceecCCccHHH
Q 017189 179 GLATHFVPSSRLAL 192 (375)
Q Consensus 179 GLv~~vv~~~~l~~ 192 (375)
|+||.||++.++..
T Consensus 257 G~vD~iv~~~~~r~ 270 (285)
T TIGR00515 257 GAIDMIVHRPEMKK 270 (285)
T ss_pred CCCcEEECcHHHHH
Confidence 99999999988743
|
The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta. |
| >COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0053 Score=60.96 Aligned_cols=147 Identities=10% Similarity=0.101 Sum_probs=105.7
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEe-eCCCCccccCCchhHhhccchhhHHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK-GKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY 94 (375)
Q Consensus 16 ~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVlt-g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~ 94 (375)
+..|..|.++. .+++.+.+.+.+.++.++++.. -+|||. -.. ..+.+.+.++.+
T Consensus 25 ~~~v~vi~i~g-----~I~~~s~~~l~r~l~~A~~~~a-~~vvl~ldTP-------------------GGl~~sm~~iv~ 79 (436)
T COG1030 25 EKKVYVIEIDG-----AIDPASADYLQRALQSAEEENA-AAVVLELDTP-------------------GGLLDSMRQIVR 79 (436)
T ss_pred CCeEEEEEecC-----ccCHHHHHHHHHHHHHHHhCCC-cEEEEEecCC-------------------CchHHHHHHHHH
Confidence 34567777754 5899999999999999998752 334433 111 112345677889
Q ss_pred HHHhCCCcEEEEEc---cccchhhhhhhhcCCEEEEeCCeEEeccccccCC---CCCcc-HHHHHh------hcch---H
Q 017189 95 LMATYTKPQVSILN---GIVMGGGAGVSIHGRFRVATENSVFAMPETALGL---FPDIG-ASYFLS------RLPG---F 158 (375)
Q Consensus 95 ~i~~~~kPvIAavn---G~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~---~p~~g-~~~~l~------rl~g---~ 158 (375)
.+.+.+.|||..|. ++|.-+|.-++++||+..|.+.+.++....-.+- .+... .+..+. +.-| .
T Consensus 80 ~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~gRN~~ 159 (436)
T COG1030 80 AILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERGRNPT 159 (436)
T ss_pred HHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcCCChH
Confidence 99999999999985 4699999999999999999999998854443222 11111 122222 2334 2
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
.|..++.-...++++||.+.|++|-+..+
T Consensus 160 ~ae~~v~~~~~l~a~eA~~~~vid~iA~~ 188 (436)
T COG1030 160 WAERFVTENLSLTAEEALRQGVIDLIARD 188 (436)
T ss_pred HHHHHhhhccCCChhHHHhcCccccccCC
Confidence 37889999999999999999999988765
|
|
| >CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.021 Score=54.37 Aligned_cols=143 Identities=16% Similarity=0.158 Sum_probs=87.2
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHH-HH
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL-MA 97 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~-i~ 97 (375)
|+....+..=..-++....-+.+.++++.+.+.. +-+|+|+.+|++ -+.+-.... ..+ ......+.. ..
T Consensus 135 v~v~a~Dftf~gGSmG~v~geKi~ra~e~A~~~r-lPlV~l~~SGGA-----RmQEg~~sL---~qm-ak~saa~~~~~~ 204 (296)
T CHL00174 135 VALGVMDFQFMGGSMGSVVGEKITRLIEYATNES-LPLIIVCASGGA-----RMQEGSLSL---MQM-AKISSALYDYQS 204 (296)
T ss_pred EEEEEECCcccccCcCHHHHHHHHHHHHHHHHcC-CCEEEEECCCCc-----cccccchhh---hhh-HHHHHHHHHHHH
Confidence 3444444444567899999999999999887754 667777765543 221100000 001 111111222 22
Q ss_pred hCCCcEEEEEccccchhhhh-hhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCc-----cC
Q 017189 98 TYTKPQVSILNGIVMGGGAG-VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGAR-----LD 171 (375)
Q Consensus 98 ~~~kPvIAavnG~a~GgG~~-Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~-----i~ 171 (375)
.-..|.|+++.|+|.||+.. +++.||++|+.+++.+++.-.+ .+.. .+|+. =+
T Consensus 205 ~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGPr-----------VIe~----------t~ge~lpe~fq~ 263 (296)
T CHL00174 205 NKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKR-----------VIEQ----------TLNKTVPEGSQA 263 (296)
T ss_pred cCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCHH-----------HHHH----------hcCCcCCccccc
Confidence 45699999999999999875 5777999999888876653221 1111 12222 23
Q ss_pred HHHHHHcCccceecCCccHHH
Q 017189 172 GAEMRACGLATHFVPSSRLAL 192 (375)
Q Consensus 172 A~eA~~~GLv~~vv~~~~l~~ 192 (375)
|+-..+.|+||.+|+..++..
T Consensus 264 ae~l~~~G~vD~iV~r~~lr~ 284 (296)
T CHL00174 264 AEYLFDKGLFDLIVPRNLLKG 284 (296)
T ss_pred HHHHHhCcCceEEEcHHHHHH
Confidence 555678999999999877643
|
|
| >TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.013 Score=60.53 Aligned_cols=153 Identities=13% Similarity=0.138 Sum_probs=96.8
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCC
Q 017189 22 LTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYT 100 (375)
Q Consensus 22 itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 100 (375)
|.-|.|. ...+++....+...+.++.+.+. ++-+|.|.-.++ |..|.+-.. ........+++.++....
T Consensus 319 vvAnd~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~G-~~~g~~~E~--------~g~~~~~a~~~~a~~~~~ 388 (512)
T TIGR01117 319 IIANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVPG-FLPGVNQEY--------GGIIRHGAKVLYAYSEAT 388 (512)
T ss_pred EEEeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCcC-ccccHHHHH--------HHHHHHHHHHHHHHHhCC
Confidence 3444443 34579999999999999988774 466666654443 555543221 223345556777888899
Q ss_pred CcEEEEEccccchhhhhhhh----cCCEEEEeCCeEEeccccccCCCCCccHHHHHhhc-c---h--HHH--HHH-hhcC
Q 017189 101 KPQVSILNGIVMGGGAGVSI----HGRFRVATENSVFAMPETALGLFPDIGASYFLSRL-P---G--FFG--EYV-GLTG 167 (375)
Q Consensus 101 kPvIAavnG~a~GgG~~Lal----a~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl-~---g--~~a--~~l-~ltG 167 (375)
+|.|+.|-|.+.|||..-+. .+|+++|.+++.++ +.++-++...+.+. + . ..+ ..+ -..-
T Consensus 389 vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~~~~~~~~~~~~~~~~~~ 461 (512)
T TIGR01117 389 VPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKEAKDPAATRKQKIAEYRE 461 (512)
T ss_pred CCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhcccccCHHHHHHHHHHHHHH
Confidence 99999999999888654332 38998887777654 44444433333221 1 0 101 111 1122
Q ss_pred CccCHHHHHHcCccceecCCccHH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRLA 191 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l~ 191 (375)
+..++..+.+.|+||.|+++.+..
T Consensus 462 ~~~~~~~~a~~g~vD~VI~P~~tR 485 (512)
T TIGR01117 462 EFANPYKAAARGYVDDVIEPKQTR 485 (512)
T ss_pred hhcCHHHHHhcCCCCeeEChHHHH
Confidence 245788999999999999998763
|
This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. |
| >PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0083 Score=61.71 Aligned_cols=133 Identities=15% Similarity=0.210 Sum_probs=88.2
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccC--CchhHhhccchhhHHHHHHHHHHHHHHhCCCc
Q 017189 25 NRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG--DVAAVVRGINEGAKFFSKEFILNYLMATYTKP 102 (375)
Q Consensus 25 nrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~--Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP 102 (375)
+..-...+++......+.++++.+.++. +-+|.|.- |.|+ .+.+-... .........-...+.. ..|
T Consensus 65 D~t~~gGs~g~~~~~Ki~ra~~~A~~~~-~P~v~l~d-----sgGa~~r~~eg~~~----l~~~g~i~~~~~~~~~-~iP 133 (493)
T PF01039_consen 65 DFTVLGGSVGEVHGEKIARAIELALENG-LPLVYLVD-----SGGAFLRMQEGVES----LMGMGRIFRAIARLSG-GIP 133 (493)
T ss_dssp ETTSGGGTBSHHHHHHHHHHHHHHHHHT-EEEEEEEE-----ESSBCGGGGGHHHH----HHHHHHHHHHHHHHHT-TS-
T ss_pred ccceecCCCCcccceeeehHHHHHHHcC-CCcEEecc-----ccccccccchhhhh----hhhhHHHHHHHHHHhc-CCC
Confidence 3334567899999999999999988764 45555554 3333 33332211 1111223333444556 899
Q ss_pred EEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH------
Q 017189 103 QVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM------ 175 (375)
Q Consensus 103 vIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA------ 175 (375)
+|+++.|+|.|||..++..||++|+.++ +.+++. +...+. ..+|+.++.++.
T Consensus 134 ~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~-----------GP~vv~----------~~~Ge~~~~~~lgG~~~h 192 (493)
T PF01039_consen 134 QISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA-----------GPRVVE----------SATGEEVDSEELGGADVH 192 (493)
T ss_dssp EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS-----------THHHHH----------HHHSSCTSHHHHHBHHHH
T ss_pred eEEEEccccccchhhcccccCccccCccceEEEec-----------cccccc----------cccCccccchhhhhhhhh
Confidence 9999999999999999999999999997 775532 111111 246777777653
Q ss_pred -HHcCccceecCCcc
Q 017189 176 -RACGLATHFVPSSR 189 (375)
Q Consensus 176 -~~~GLv~~vv~~~~ 189 (375)
...|.+|.++++++
T Consensus 193 ~~~sG~~d~v~~de~ 207 (493)
T PF01039_consen 193 AAKSGVVDYVVDDEE 207 (493)
T ss_dssp HHTSSSSSEEESSHH
T ss_pred cccCCCceEEEechH
Confidence 36899999998754
|
The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F .... |
| >COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.012 Score=52.71 Aligned_cols=142 Identities=15% Similarity=0.174 Sum_probs=87.3
Q ss_pred EEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEE--EeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLI--LKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 22 itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vV--ltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
|.|..| ++..+...+...+..++.++..+-|. |-+.|+...+| ..++..|...
T Consensus 30 I~l~g~-----I~~~~a~~i~aqll~Lea~~~~k~I~lyINSpGG~V~aG--------------------~AIydtm~~i 84 (200)
T COG0740 30 IFLGGE-----IEDHMANLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAG--------------------LAIYDTMQFI 84 (200)
T ss_pred EEEeee-----echHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCcccchh--------------------HHHHHHHHhc
Confidence 555544 44455555665555555544334333 34444433333 2245567789
Q ss_pred CCcEEEEEccccchhhhhhhhcCCEE--EEeCCeEEeccccccCCCCCccHHHHH-h---------------hcch-HH-
Q 017189 100 TKPQVSILNGIVMGGGAGVSIHGRFR--VATENSVFAMPETALGLFPDIGASYFL-S---------------RLPG-FF- 159 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~Lala~D~r--ia~~~a~f~~pe~~~G~~p~~g~~~~l-~---------------rl~g-~~- 159 (375)
+.||...|-|.|...|..|+++++.. ++.+++++-..... |.+-+...=... + .--| ..
T Consensus 85 k~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i~a~~TGq~~e 163 (200)
T COG0740 85 KPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRIYAEHTGQTLE 163 (200)
T ss_pred CCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999975 88888888766665 333222110000 0 1112 11
Q ss_pred -HHHHhhcCCccCHHHHHHcCccceecCCcc
Q 017189 160 -GEYVGLTGARLDGAEMRACGLATHFVPSSR 189 (375)
Q Consensus 160 -a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~ 189 (375)
-....-...-++|+||+++||||+|+....
T Consensus 164 ~i~~d~drd~~msa~eA~~yGLiD~V~~~~~ 194 (200)
T COG0740 164 KIEKDTDRDTWMSAEEAKEYGLIDKVIESRE 194 (200)
T ss_pred HHHHhhcccccCCHHHHHHcCCcceeccccc
Confidence 122233444589999999999999998654
|
|
| >PRK12552 ATP-dependent Clp protease-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.017 Score=52.88 Aligned_cols=142 Identities=17% Similarity=0.176 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHHhhcCCCce--EEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVK--LLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr--~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
++.++...+...|-.++.++..+ -+-|-+.|+...+|-=+... .....++..|...+-||...+-|.
T Consensus 49 ~~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpGGsv~~G~~iG~v-----------~~glaIyD~m~~ik~~V~Tv~~G~ 117 (222)
T PRK12552 49 VGMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGFE-----------TEAFAICDTMRYIKPPVHTICIGQ 117 (222)
T ss_pred hhHhHHHHHHHHHHHHhccCCCCCEEEEEeCCCCCcccccccccc-----------ccHHHHHHHHHhcCCCeEEEEEee
Confidence 34448888888888886543222 33345555544444111000 111234455666778899999999
Q ss_pred cchhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHHHH------Hh-----------hcch-H--HHHHHhhcCC
Q 017189 111 VMGGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGASYF------LS-----------RLPG-F--FGEYVGLTGA 168 (375)
Q Consensus 111 a~GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~~~------l~-----------rl~g-~--~a~~l~ltG~ 168 (375)
|.+.+..|++++|- |++.++++|-+....-|.. + -++-+ +- ...| . .-...+-.-.
T Consensus 118 AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~-G-~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~I~~d~~rd~ 195 (222)
T PRK12552 118 AMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR-G-QATDIQIRAKEVLHNKRTMLEILSRNTGQTVEKLSKDTDRMF 195 (222)
T ss_pred hhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc-c-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHhcCCC
Confidence 99999999999995 9999999998877654432 1 11111 10 1112 0 1122233334
Q ss_pred ccCHHHHHHcCccceecCC
Q 017189 169 RLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 169 ~i~A~eA~~~GLv~~vv~~ 187 (375)
-++|+||+++||||+|+.+
T Consensus 196 wmsA~EA~eyGliD~Ii~~ 214 (222)
T PRK12552 196 YLTPQEAKEYGLIDRVLES 214 (222)
T ss_pred cCCHHHHHHcCCCcEEecc
Confidence 5899999999999999975
|
|
| >PRK10949 protease 4; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.011 Score=62.22 Aligned_cols=85 Identities=13% Similarity=0.081 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhh
Q 017189 37 MISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGA 116 (375)
Q Consensus 37 ~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~ 116 (375)
.+.++.++++.+..|+.|++|||.-.+. .|..+.. .+.+++.+..+....|||||.-+.++ -+|.
T Consensus 96 ~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~-----------~~eI~~ai~~fk~sGKpVvA~~~~~~-s~~Y 160 (618)
T PRK10949 96 SLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPS-----------MQYIGKALREFRDSGKPVYAVGDSYS-QGQY 160 (618)
T ss_pred cHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHH-----------HHHHHHHHHHHHHhCCeEEEEecCcc-chhh
Confidence 4568999999999999999999997531 1222111 12344455566677899999655444 4689
Q ss_pred hhhhcCCEEEEeCCeEEecc
Q 017189 117 GVSIHGRFRVATENSVFAMP 136 (375)
Q Consensus 117 ~Lala~D~ria~~~a~f~~p 136 (375)
-|+.+||-+++.+.+.+++.
T Consensus 161 yLASaAD~I~l~P~G~v~~~ 180 (618)
T PRK10949 161 YLASFANKIYLSPQGVVDLH 180 (618)
T ss_pred hhhhhCCEEEECCCceEEEe
Confidence 99999999999998776543
|
|
| >PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.035 Score=57.82 Aligned_cols=137 Identities=15% Similarity=0.202 Sum_probs=84.9
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEE
Q 017189 25 NRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQV 104 (375)
Q Consensus 25 nrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 104 (375)
+..=+..+++....+.+.++++.+.+.. +-+|.|.-+|+++-.+ ....+.. ...+..+.....++.....|.|
T Consensus 137 D~tv~GGs~g~~~~~Ki~r~~elA~~~~-lPlV~l~DSgGarl~~-q~e~~~~-----~~~~g~if~~~~~ls~~~VP~I 209 (569)
T PLN02820 137 DPTVKGGTYYPITVKKHLRAQEIAAQCR-LPCIYLVDSGGANLPR-QAEVFPD-----RDHFGRIFYNQARMSSAGIPQI 209 (569)
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCcCCcc-cccccch-----HhHHHHHHHHHHHHhCCCCCEE
Confidence 3333567999999999999999988764 5666666554444221 1111100 0011122222233455679999
Q ss_pred EEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH-----H--
Q 017189 105 SILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM-----R-- 176 (375)
Q Consensus 105 AavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA-----~-- 176 (375)
++|-|.|.|||..+...||++|++++ +.+.+ ++...+.. .||+.+++++. +
T Consensus 210 svv~G~~~gGgAy~~a~~D~vim~~~~a~i~~-----------aGP~vV~~----------~~Ge~v~~eeLGGa~~h~~ 268 (569)
T PLN02820 210 ALVLGSCTAGGAYVPAMADESVIVKGNGTIFL-----------AGPPLVKA----------ATGEEVSAEDLGGADVHCK 268 (569)
T ss_pred EEEeCCCChHHHHHHHhCCceEEecCCcEEEe-----------cCHHHHHh----------hcCcccCHHHhCCHHHhcc
Confidence 99999999999999999999999875 54443 11111111 35555555554 3
Q ss_pred HcCccceecCCcc
Q 017189 177 ACGLATHFVPSSR 189 (375)
Q Consensus 177 ~~GLv~~vv~~~~ 189 (375)
..|.+|.+++++.
T Consensus 269 ~sGv~d~~~~de~ 281 (569)
T PLN02820 269 VSGVSDHFAQDEL 281 (569)
T ss_pred cccccccccCchH
Confidence 3799998888754
|
|
| >TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.038 Score=57.04 Aligned_cols=128 Identities=15% Similarity=0.193 Sum_probs=78.5
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCcc-ccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEE
Q 017189 29 QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC-AGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSIL 107 (375)
Q Consensus 29 ~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~-aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAav 107 (375)
+.-+++....+.+.++++.+.++. +-+|.|.-+|+++- -|.+ .+. .+.+.+... . ...-..|.|++|
T Consensus 94 ~gGS~g~~~~~K~~r~~e~A~~~~-lPlV~l~dSgGarm~eg~~--~l~-------~~~~~~~~~-~-~~s~~iP~Isvv 161 (512)
T TIGR01117 94 MGGSLGEMHAAKIVKIMDLAMKMG-APVVGLNDSGGARIQEAVD--ALK-------GYGDIFYRN-T-IASGVVPQISAI 161 (512)
T ss_pred cccCCCHHHHHHHHHHHHHHHHcC-CCEEEEecCCCCCccccch--hhh-------hHHHHHHHH-H-HHcCCCcEEEEE
Confidence 567899999999999999888765 45566554433321 1111 010 111111111 1 123358999999
Q ss_pred ccccchhhhhhhhcCCEEEEeCCe-EEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH-----H--HcC
Q 017189 108 NGIVMGGGAGVSIHGRFRVATENS-VFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM-----R--ACG 179 (375)
Q Consensus 108 nG~a~GgG~~Lala~D~ria~~~a-~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA-----~--~~G 179 (375)
.|.|.||+......||++|+++++ .+++ ++...+.. .+|+.+++++. + .-|
T Consensus 162 ~G~~~GG~a~~~al~D~vim~~~~a~i~~-----------aGP~vv~~----------~~Ge~v~~e~lGGa~~h~~~sG 220 (512)
T TIGR01117 162 MGPCAGGAVYSPALTDFIYMVDNTSQMFI-----------TGPQVIKT----------VTGEEVTAEQLGGAMAHNSVSG 220 (512)
T ss_pred ecCCCcHHHHHHHhcCceEEeccceEEEe-----------cChHHHHh----------hcCcccchhhcchHHHhccccc
Confidence 999999998777799999999964 4443 11111221 34555555444 3 489
Q ss_pred ccceecCCcc
Q 017189 180 LATHFVPSSR 189 (375)
Q Consensus 180 Lv~~vv~~~~ 189 (375)
.+|.+++++.
T Consensus 221 v~d~~~~de~ 230 (512)
T TIGR01117 221 VAHFIAEDDD 230 (512)
T ss_pred eeEEecCChH
Confidence 9999998744
|
This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. |
| >COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.049 Score=55.69 Aligned_cols=196 Identities=15% Similarity=0.131 Sum_probs=108.5
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEE
Q 017189 25 NRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQV 104 (375)
Q Consensus 25 nrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvI 104 (375)
+.+-+.-++..-..+.+.++.+.+.++..-.+.+..|.| +.+.+-... ...+...+.-..++... .|.|
T Consensus 99 D~TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~dsgG------ari~~~v~~----l~g~g~iF~~~a~~Sg~-IPqI 167 (526)
T COG4799 99 DFTVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDSGG------ARIQEGVPS----LAGYGRIFYRNARASGV-IPQI 167 (526)
T ss_pred cCceecccccccccchHHHHHHHHHHcCCCEEEEEcccc------cccccCccc----cccchHHHHHHHHhccC-CCEE
Confidence 345577788888888888888888877554555555544 222221100 11112223233445555 9999
Q ss_pred EEEccccchhhhhhhhcCCEEEEeCCe-EEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH-------H
Q 017189 105 SILNGIVMGGGAGVSIHGRFRVATENS-VFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM-------R 176 (375)
Q Consensus 105 AavnG~a~GgG~~Lala~D~ria~~~a-~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA-------~ 176 (375)
++|-|.|.|||.-+...||++|+.++. ++.+ + |+..-. ..||+.++++|. .
T Consensus 168 svv~G~c~gGgaY~pal~D~~imv~~~~~mfl-----------t---------GP~~ik-~vtGe~V~~e~LGGa~vh~~ 226 (526)
T COG4799 168 SVVMGPCAGGGAYSPALTDFVIMVRDQSYMFL-----------T---------GPPVIK-AVTGEEVSAEELGGAQVHAR 226 (526)
T ss_pred EEEEecCcccccccccccceEEEEcCCccEEe-----------e---------CHHHHH-hhcCcEeehhhccchhhhcc
Confidence 999999999999999999999999984 3221 0 111111 135665555542 2
Q ss_pred HcCccceecCCccH-HHHHHHH-HhcCCCChHH--HH-------HHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 177 ACGLATHFVPSSRL-ALLEEAL-YKVNSSDPAV--IS-------AVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 177 ~~GLv~~vv~~~~l-~~~~~~l-~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
..|.+|.+.+++.- ....+.+ .-+++..... +. .--+......+.++....+-...|.+.|+.+++.|+
T Consensus 227 ~sGva~~~a~dd~~Ai~~vr~~lsylp~~~~~~~p~~~~~~~~~~~~~~l~~ivP~d~~~pYDvrevI~rl~D~~~F~E~ 306 (526)
T COG4799 227 KSGVADLLAEDDEDAIELVRRLLSYLPSNNREPPPVVPTPDEPDRDDEELDSIVPDDPRKPYDVREVIARLVDDGEFLEF 306 (526)
T ss_pred cccceeeeecCHHHHHHHHHHHHHhcCccCCCCCCcCCCCCCcccChhhhcccCCCCCCccccHHHHHHHhcCCccHHHH
Confidence 34888888876431 1122222 2222211110 00 000000011222333344667899999998899887
Q ss_pred HHHHhhc
Q 017189 246 LSALESE 252 (375)
Q Consensus 246 ~~~L~~~ 252 (375)
-...-.+
T Consensus 307 ~~~~a~~ 313 (526)
T COG4799 307 KAGYAKN 313 (526)
T ss_pred HhhhCcc
Confidence 7655443
|
|
| >COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.0099 Score=55.78 Aligned_cols=91 Identities=18% Similarity=0.158 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcC
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTG 167 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG 167 (375)
.+.+-...+.++++|+||.|=|---+||.-=...+|.++|-++++|+. +.|.++ +..|.+=.. ++.+. -..
T Consensus 176 AIA~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~-AsILWkD~~-ka~eA-Ae~ 246 (317)
T COG0825 176 AIARNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGC-ASILWKDAS-KAKEA-AEA 246 (317)
T ss_pred HHHHHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhh-hhhhhcChh-hhHHH-HHH
Confidence 344455667899999999999877666655455689999999999873 334444 444444322 22222 244
Q ss_pred CccCHHHHHHcCccceecCC
Q 017189 168 ARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~ 187 (375)
..|+|.+.+++||||.|+|.
T Consensus 247 mkita~dLk~lgiID~II~E 266 (317)
T COG0825 247 MKITAHDLKELGIIDGIIPE 266 (317)
T ss_pred cCCCHHHHHhCCCcceeccC
Confidence 57999999999999999985
|
|
| >COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.38 Score=45.03 Aligned_cols=147 Identities=13% Similarity=0.144 Sum_probs=92.4
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
|+...++-.=-..+|..-.=+.|.++++.+-++ .+.+|+++.+|++=..-+-+. --........+.++..
T Consensus 124 vv~av~df~FmgGSmGsVvGeki~ra~E~A~e~-k~P~v~f~aSGGARMQEg~lS---------LMQMaktsaAl~~l~e 193 (294)
T COG0777 124 VVLAVMDFAFMGGSMGSVVGEKITRAIERAIED-KLPLVLFSASGGARMQEGILS---------LMQMAKTSAALKRLSE 193 (294)
T ss_pred EEEEEEeccccccchhHHHHHHHHHHHHHHHHh-CCCEEEEecCcchhHhHHHHH---------HHHHHHHHHHHHHHHh
Confidence 344445544445678877888899999888775 588999988774321111110 0011222334556777
Q ss_pred CCCcEEEEEccccchhh-hhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHHHH
Q 017189 99 YTKPQVSILNGIVMGGG-AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRA 177 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG-~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA~~ 177 (375)
-..|.|+.+..+.+||= ..+++..|+.||-++|.++|...++ --+.+..-++ -..=+++-.++
T Consensus 194 a~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRV-------IEQTire~LP---------egfQ~aEfLle 257 (294)
T COG0777 194 AGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRV-------IEQTIREKLP---------EGFQTAEFLLE 257 (294)
T ss_pred cCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcchh-------hhhhhcccCC---------cchhhHHHHHH
Confidence 88999999999999874 5799999999999888876643321 1111111111 00113444569
Q ss_pred cCccceecCCccHH
Q 017189 178 CGLATHFVPSSRLA 191 (375)
Q Consensus 178 ~GLv~~vv~~~~l~ 191 (375)
.|+||.||+..++.
T Consensus 258 hG~iD~iv~R~elr 271 (294)
T COG0777 258 HGMIDMIVHRDELR 271 (294)
T ss_pred cCCceeeecHHHHH
Confidence 99999999987663
|
|
| >PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.36 Score=49.74 Aligned_cols=154 Identities=18% Similarity=0.191 Sum_probs=92.8
Q ss_pred EEEEcCCCCC-CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 21 ILTLNRPRQL-NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 21 ~itlnrp~~~-Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
-|.-|+|... -+++.+-.....+.++.++. .++-+|.|.-. ..|..|..-+. ....+...+++.++..+
T Consensus 297 Giian~~~~~~G~~~~~~a~K~arfi~lcd~-~~iPlv~l~dt-pGf~~g~~~E~--------~g~~~~ga~~~~a~~~~ 366 (493)
T PF01039_consen 297 GIIANNPRQRAGALDPDGARKAARFIRLCDA-FNIPLVTLVDT-PGFMPGPEAER--------AGIIRAGARLLYALAEA 366 (493)
T ss_dssp EEEEE-TTCGGGEB-HHHHHHHHHHHHHHHH-TT--EEEEEEE-CEB--SHHHHH--------TTHHHHHHHHHHHHHHH
T ss_pred EEEEeccccccccCChHHHHHHHHHHHHHHh-hCCceEEEeec-ccccccchhhh--------cchHHHHHHHHHHHHcC
Confidence 3445666422 26999999999999999987 45777777643 23555532211 23455667788999999
Q ss_pred CCcEEEEEccccchhhhhhhhcC----CEEEEeCCeEEeccccccCCCCCccHHHHHhhcch---H---------HHHHH
Q 017189 100 TKPQVSILNGIVMGGGAGVSIHG----RFRVATENSVFAMPETALGLFPDIGASYFLSRLPG---F---------FGEYV 163 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~Lala~----D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g---~---------~a~~l 163 (375)
..|+|+.|-|.+.|||....... |+++|.++++ +|++++-++...+.+.-- . ....+
T Consensus 367 ~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~-------~~vm~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~~ 439 (493)
T PF01039_consen 367 TVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAE-------IGVMGPEGAASILYRDELEAAEAEGADPEAQRAEKI 439 (493)
T ss_dssp -S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-E-------EESS-HHHHHHHHTHHHHHHSCHCCHSHHHHHHHHH
T ss_pred CCCEEEEEeCCccCcchhhhcccccchhhhhhhhcce-------eeecChhhhheeeehhhhhhhhcccchhHHHHHHHH
Confidence 99999999999999877444444 7776666665 455555554444432210 0 11111
Q ss_pred hh-cCCccCHHHHHHcCccceecCCccHH
Q 017189 164 GL-TGARLDGAEMRACGLATHFVPSSRLA 191 (375)
Q Consensus 164 ~l-tG~~i~A~eA~~~GLv~~vv~~~~l~ 191 (375)
-- .-...++..+...|++|.++++.+..
T Consensus 440 ~~~~~~~~~~~~~a~~~~~D~ii~p~~tR 468 (493)
T PF01039_consen 440 AEYEDELSSPYRAASRGYVDDIIDPAETR 468 (493)
T ss_dssp HHHHHHHSSHHHHHHTTSSSEESSGGGHH
T ss_pred HHHHHhcCCHHHHHhcCCCCCccCHHHHH
Confidence 11 11225889999999999999998863
|
The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F .... |
| >PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.82 Score=47.82 Aligned_cols=143 Identities=13% Similarity=0.079 Sum_probs=93.5
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
-+++.+-.....+.++.+++ -++-+|-|.-..+ |..|.+-+. ....+...+++.++....+|.|+.|-|.
T Consensus 380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~pG-f~~G~~~E~--------~G~~~~~a~l~~A~a~~~VP~isvi~g~ 449 (569)
T PLN02820 380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNITG-FMVGSRSEA--------SGIAKAGAKMVMAVACAKVPKITIIVGG 449 (569)
T ss_pred CccCHHHHHHHHHHHHHHHh-cCCCEEEEEECCC-CCCCHHHHH--------hhHHHHHHHHHHHHHhCCCCEEEEEECC
Confidence 35788888888888888876 4566666654332 666654332 2245566778888899999999999999
Q ss_pred cchhhhhhhh----cCCEEEEeCCeEEeccccccCCCCCccHHHHHhhc-c------------hHH-HH-H-H-hhcCCc
Q 017189 111 VMGGGAGVSI----HGRFRVATENSVFAMPETALGLFPDIGASYFLSRL-P------------GFF-GE-Y-V-GLTGAR 169 (375)
Q Consensus 111 a~GgG~~Lal----a~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl-~------------g~~-a~-~-l-~ltG~~ 169 (375)
|+|+|..-.+ ..|+++|.+++ .+|+.++-++...+.+. + -.. +. . + -..-+.
T Consensus 450 a~G~g~~aM~g~~~~~d~~~awp~A-------~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (569)
T PLN02820 450 SFGAGNYGMCGRAYSPNFLFMWPNA-------RIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVEAYERE 522 (569)
T ss_pred cchHHHHHhcCcCCCCCEEEECCCC-------eEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHHHHHHh
Confidence 9998754333 55666665555 56666666666555431 1 011 00 0 0 112224
Q ss_pred cCHHHHHHcCccceecCCccH
Q 017189 170 LDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~l 190 (375)
.++..|...|+||.|+++.+.
T Consensus 523 ~~p~~aa~~~~vD~VIdP~dT 543 (569)
T PLN02820 523 ANPYYSTARLWDDGVIDPADT 543 (569)
T ss_pred CCHHHHHHcCCcCcccCHHHH
Confidence 577788899999999999765
|
|
| >PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.13 Score=51.40 Aligned_cols=67 Identities=12% Similarity=0.210 Sum_probs=52.8
Q ss_pred HHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh---hccCCCCCCCCCCC
Q 017189 263 DAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI---LLDKDKNPKWKPSK 335 (375)
Q Consensus 263 ~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~---l~ek~r~P~w~~~~ 335 (375)
+.+++++..+|.++..+|+.++... .+....+..+...+..++.++ |+.|++++| + +| |.|.|.-+.
T Consensus 228 ~~~~~i~~~~p~av~~~k~~~~~~~-~~~~~~l~~~~~~i~~~f~~~---d~~ei~~al~~~~-~k-r~~~wa~~~ 297 (401)
T PLN02157 228 EQLKKLLTDDPSVVESCLEKCAEVA-HPEKTGVIRRIDLLEKCFSHD---TVEEIIDSLEIEA-GR-RKDTWCITT 297 (401)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhccc-CCcchhHHHHHHHHHHHhcCC---CHHHHHHHHHhhh-cc-cchHHHHHH
Confidence 4467888889999999999997653 346677788888888999754 999999998 4 66 678887543
|
|
| >KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=90.89 E-value=1.4 Score=40.94 Aligned_cols=132 Identities=17% Similarity=0.279 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++.++-..+...|-.++.+++-|=|.+.=. |-|+++.. ...++..+..+.-||=..+=|.|.
T Consensus 101 Idd~va~~viaqlL~Ld~ed~~K~I~lyIN----SPGG~vta--------------glAIYDtMq~ik~~V~Tic~G~Aa 162 (275)
T KOG0840|consen 101 IDDDVANLVIAQLLYLDSEDPKKPIYLYIN----SPGGSVTA--------------GLAIYDTMQYIKPDVSTICVGLAA 162 (275)
T ss_pred CcHHHHHHHHHHHHHhhccCCCCCeEEEEe----CCCCccch--------------hhhHHHHHHhhCCCceeeehhhHH
Confidence 788888888888888877666666655422 23333311 112334455566666666668887
Q ss_pred hhhhhhhhcCCEEEEeCCeEEeccccccCCC-CCcc----HHHHHhh---cch---HH-HHHHhhcCC------------
Q 017189 113 GGGAGVSIHGRFRVATENSVFAMPETALGLF-PDIG----ASYFLSR---LPG---FF-GEYVGLTGA------------ 168 (375)
Q Consensus 113 GgG~~Lala~D~ria~~~a~f~~pe~~~G~~-p~~g----~~~~l~r---l~g---~~-a~~l~ltG~------------ 168 (375)
+-|.-|..+. +++-+|++|..++=+. |-+| ++-..-+ +.- .. -.+.--||+
T Consensus 163 s~aalLLaaG-----~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i~~d~dRd 237 (275)
T KOG0840|consen 163 SMAALLLAAG-----AKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEVIEKDMDRD 237 (275)
T ss_pred hHHHHHHhcC-----CCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHhhhccc
Confidence 7665444432 4555666666665553 3222 1111110 110 00 122223454
Q ss_pred -ccCHHHHHHcCccceecCC
Q 017189 169 -RLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 169 -~i~A~eA~~~GLv~~vv~~ 187 (375)
.++|+||.++||||.|++.
T Consensus 238 ~fmsa~EA~eyGliD~v~~~ 257 (275)
T KOG0840|consen 238 RFMSAEEAKEYGLIDKVIDH 257 (275)
T ss_pred ccCCHHHHHHhcchhhhhcC
Confidence 4899999999999999874
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 375 | ||||
| 3bpt_A | 363 | Crystal Structure Of Human Beta-Hydroxyisobutyryl-C | 3e-70 | ||
| 4hdt_A | 353 | Crystal Structure Of A Carnitinyl-Coa Dehydratase F | 1e-50 | ||
| 4j2u_A | 365 | Crystal Structure Of An Enoyl-coa Hydratase From Rh | 5e-42 | ||
| 3ju1_A | 407 | Crystal Structure Of Enoyl-Coa HydrataseISOMERASE F | 4e-37 | ||
| 3hrx_A | 254 | Crystal Structure Of Phenylacetic Acid Degradation | 7e-20 | ||
| 3rsi_A | 265 | The Structure Of A Putative Enoyl-Coa HydrataseISOM | 2e-18 | ||
| 3q0j_A | 258 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-17 | ||
| 3pzk_A | 257 | Crystal Structure Of The Mycobacterium Tuberculosis | 3e-17 | ||
| 3h81_A | 278 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 4e-17 | ||
| 3qyr_A | 253 | Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 M | 4e-16 | ||
| 4f47_A | 278 | The Structure Of Enoyl-Coa Hydratase Echa19 From My | 4e-16 | ||
| 3p85_A | 270 | Crystal Structure Enoyl-Coa Hydratase From Mycobact | 5e-16 | ||
| 2pbp_A | 258 | Crystal Structure Of Enoyl-Coa Hydrates Subunit I ( | 9e-16 | ||
| 2ej5_A | 257 | Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydr | 2e-15 | ||
| 1ey3_A | 258 | Structure Of Enoyl-Coa Hydratase Complexed With The | 2e-15 | ||
| 1mj3_A | 260 | Crystal Structure Analysis Of Rat Enoyl-Coa Hydrata | 2e-15 | ||
| 1dub_A | 261 | 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph | 3e-15 | ||
| 2hw5_A | 286 | The Crystal Structure Of Human Enoyl-Coenzyme A (Co | 4e-15 | ||
| 3kqf_A | 265 | 1.8 Angstrom Resolution Crystal Structure Of Enoyl- | 8e-15 | ||
| 3tlf_A | 274 | Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS | 2e-14 | ||
| 3r9t_A | 267 | Structure Of Echa1_1 From Mycobacterium Paratubercu | 2e-14 | ||
| 3r9s_A | 267 | Structure Of A Carnitinyl-Coa Dehydratase From Myco | 3e-14 | ||
| 3moy_A | 263 | Crystal Structure Of Probable Enoyl-Coa Hydratase F | 8e-14 | ||
| 4fzw_A | 258 | Crystal Structure Of The Paaf-paag Hydratase-isomer | 2e-13 | ||
| 3r0o_A | 273 | Crystal Structure Of Carnitinyl-Coa Hydratase From | 3e-13 | ||
| 1uiy_A | 253 | Crystal Structure Of Enoyl-Coa Hydratase From Therm | 5e-13 | ||
| 3qxz_A | 265 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 2e-12 | ||
| 2uzf_A | 273 | Crystal Structure Of Staphylococcus Aureus 1,4-Dihy | 3e-12 | ||
| 3t88_A | 289 | Crystal Structure Of Escherichia Coli Menb In Compl | 5e-12 | ||
| 4els_A | 285 | Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Co | 5e-12 | ||
| 1dci_A | 275 | Dienoyl-Coa Isomerase Length = 275 | 6e-12 | ||
| 2iex_A | 272 | Crystal Structure Of Dihydroxynapthoic Acid Synthet | 6e-12 | ||
| 3qmj_A | 256 | Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 Fr | 8e-12 | ||
| 3pea_A | 261 | Crystal Structure Of Enoyl-Coa Hydratase From Bacil | 9e-12 | ||
| 4fzw_C | 274 | Crystal Structure Of The Paaf-paag Hydratase-isomer | 1e-11 | ||
| 3qxi_A | 265 | Crystal Structure Of Enoyl-Coa Hydratase Echa1 From | 1e-11 | ||
| 2vsu_A | 276 | A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase | 1e-11 | ||
| 2vsu_C | 275 | A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase | 1e-11 | ||
| 2vsu_F | 276 | A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase | 1e-11 | ||
| 2j5i_B | 276 | Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase | 1e-11 | ||
| 2vsu_E | 276 | A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase | 1e-11 | ||
| 2j5i_I | 276 | Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase | 2e-11 | ||
| 2vss_F | 276 | Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C | 2e-11 | ||
| 2vss_E | 276 | Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C | 2e-11 | ||
| 3swx_A | 265 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 2e-11 | ||
| 2vre_A | 296 | Crystal Structure Of Human Peroxisomal Delta3,5, De | 2e-11 | ||
| 3he2_A | 264 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 3e-11 | ||
| 3rrv_A | 276 | Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS | 3e-11 | ||
| 3sll_A | 290 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 4e-11 | ||
| 3p5m_A | 255 | Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS | 4e-11 | ||
| 2j5i_A | 276 | Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase | 5e-11 | ||
| 3h02_A | 288 | 2.15 Angstrom Resolution Crystal Structure Of Napht | 6e-11 | ||
| 3myb_A | 286 | Crystal Structure Of Enoyl-Coa Hydratase Mycobacter | 2e-10 | ||
| 3pe8_A | 256 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 2e-10 | ||
| 1jxz_A | 269 | Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coe | 2e-10 | ||
| 3lke_A | 263 | Crystal Structure Of Enoyl-Coa Hydratase From Bacil | 4e-10 | ||
| 1nzy_A | 269 | 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo | 4e-10 | ||
| 1nzy_B | 269 | 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo | 4e-10 | ||
| 3oc7_A | 267 | Crystal Structure Of An Enoyl-Coa Hydratase From My | 8e-10 | ||
| 3fdu_A | 266 | Crystal Structure Of A Putative Enoyl-Coa Hydratase | 9e-10 | ||
| 3trr_A | 256 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 1e-09 | ||
| 3qka_A | 261 | Crystal Structure Of Enoyl-Coa Hydratase Echa5 From | 1e-08 | ||
| 3qre_A | 298 | Crystal Structure Of An Enoyl-Coa Hydratase Echa12_ | 1e-08 | ||
| 3l3s_A | 263 | Crystal Structure Of An Enoyl-Coa HydrotaseISOMERAS | 2e-08 | ||
| 3njb_A | 333 | Crystal Structure Of Enoyl-Coa Hydratase From Mycob | 2e-08 | ||
| 4eml_A | 275 | Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoy | 3e-08 | ||
| 3ome_A | 282 | Crystal Structure Of A Probable Enoyl-Coa Hydratase | 3e-08 | ||
| 3i47_A | 268 | Crystal Structure Of Putative Enoyl Coa HydrataseIS | 5e-08 | ||
| 3hp0_A | 267 | Crystal Structure Of A Putative Polyketide Biosynth | 6e-08 | ||
| 1wdk_A | 715 | Fatty Acid Beta-Oxidation Multienzyme Complex From | 6e-08 | ||
| 1hzd_A | 272 | Crystal Structure Of Human Auh Protein, An Rna-Bind | 7e-08 | ||
| 3t3w_A | 279 | Crystal Structure Of Probable Enoyl-Coa Hydratase F | 1e-07 | ||
| 3hin_A | 275 | Crystal Structure Of Putative Enoyl-Coa Hydratase F | 1e-07 | ||
| 2vx2_A | 287 | Crystal Structure Of Human Enoyl Coenzyme A Hydrata | 4e-07 | ||
| 2a7k_A | 250 | Carboxymethylproline Synthase (carb) From Pectobact | 5e-07 | ||
| 3g64_A | 279 | Crystal Structure Of Putative Enoyl-Coa Hydratase F | 6e-07 | ||
| 2x58_A | 727 | The Crystal Structure Of Mfe1 Liganded With Coa Len | 9e-07 | ||
| 3zw8_A | 742 | Crystal Structure Of Rat Peroxisomal Multifunctiona | 1e-06 | ||
| 3zwb_A | 742 | Crystal Structure Of Rat Peroxisomal Multifunctiona | 5e-06 | ||
| 3qk8_A | 272 | Crystal Structure Of Enoyl-Coa Hydratase Echa15 Fro | 1e-05 | ||
| 1ef8_A | 261 | Crystal Structure Of Methylmalonyl Coa Decarboxylas | 2e-05 | ||
| 3r9q_A | 262 | Structure Of A Probable Enoyl-Coa HydrataseISOMERAS | 4e-05 | ||
| 3m6m_A | 305 | Crystal Structure Of Rpff Complexed With Rec Domain | 6e-05 | ||
| 2wtb_A | 725 | Arabidopsis Thaliana Multifuctional Protein, Mfp2 L | 3e-04 | ||
| 3isa_A | 254 | Crystal Structure Of Putative Enoyl-Coa HydrataseIS | 9e-04 |
| >pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363 | Back alignment and structure |
|
| >pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile Length = 353 | Back alignment and structure |
|
| >pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From Rhodobacter Sphaeroides 2.4.1 Length = 365 | Back alignment and structure |
|
| >pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY PROTEIN Length = 407 | Back alignment and structure |
|
| >pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein Paag Length = 254 | Back alignment and structure |
|
| >pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 265 | Back alignment and structure |
|
| >pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Complex With The Inhibitor Acetoacetylcoa Length = 258 | Back alignment and structure |
|
| >pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Apo Form Length = 257 | Back alignment and structure |
|
| >pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 278 | Back alignment and structure |
|
| >pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From Mycobacterium Marinum Length = 278 | Back alignment and structure |
|
| >pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium Avium Length = 270 | Back alignment and structure |
|
| >pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I (Gk_2039) From Geobacillus Kaustophilus Hta426 Length = 258 | Back alignment and structure |
|
| >pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase Subunit Ii) From Geobacillus Kaustophilus Length = 257 | Back alignment and structure |
|
| >pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The Substrate Dac-Coa Length = 258 | Back alignment and structure |
|
| >pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In Complex With Hexadienoyl-Coa Length = 260 | Back alignment and structure |
|
| >pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5 Length = 261 | Back alignment and structure |
|
| >pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa) Hydratase Short Chain 1, Echs1 Length = 286 | Back alignment and structure |
|
| >pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis. Length = 265 | Back alignment and structure |
|
| >pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 274 | Back alignment and structure |
|
| >pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 267 | Back alignment and structure |
|
| >pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Avium 104 Length = 267 | Back alignment and structure |
|
| >pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycob Smegmatis Length = 263 | Back alignment and structure |
|
| >pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 258 | Back alignment and structure |
|
| >pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From Mycobacterium Avium Length = 273 | Back alignment and structure |
|
| >pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus Thermophilus Hb8 Length = 253 | Back alignment and structure |
|
| >pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265 | Back alignment and structure |
|
| >pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus 1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In Complex With Acetoacetyl Coa Length = 273 | Back alignment and structure |
|
| >pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With Substrate Analogue, Osb-Ncoa Length = 289 | Back alignment and structure |
|
| >pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme A Synthases (Menb) In Complex With Bicarbonate Length = 285 | Back alignment and structure |
|
| >pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase Length = 275 | Back alignment and structure |
|
| >pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase (Gk2873) From Geobacillus Kaustophilus Hta426 Length = 272 | Back alignment and structure |
|
| >pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From Mycobacterium Marinum Length = 256 | Back alignment and structure |
|
| >pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis Str. 'ames Ancestor' Length = 261 | Back alignment and structure |
|
| >pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 274 | Back alignment and structure |
|
| >pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From Mycobacterium Marinum Length = 265 | Back alignment and structure |
|
| >pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism. Length = 276 | Back alignment and structure |
|
| >pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 275 | Back alignment and structure |
|
| >pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276 | Back alignment and structure |
|
| >pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276 | Back alignment and structure |
|
| >pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276 | Back alignment and structure |
|
| >pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276 | Back alignment and structure |
|
| >pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276 | Back alignment and structure |
|
| >pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276 | Back alignment and structure |
|
| >pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265 | Back alignment and structure |
|
| >pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5, Delta2,4-Dienoyl Coa Isomerase Length = 296 | Back alignment and structure |
|
| >pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 264 | Back alignment and structure |
|
| >pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 276 | Back alignment and structure |
|
| >pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 290 | Back alignment and structure |
|
| >pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Avium Length = 255 | Back alignment and structure |
|
| >pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276 | Back alignment and structure |
|
| >pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate Synthase From Salmonella Typhimurium. Length = 288 | Back alignment and structure |
|
| >pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium Smegm Length = 286 | Back alignment and structure |
|
| >pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 256 | Back alignment and structure |
|
| >pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A (Product) Length = 269 | Back alignment and structure |
|
| >pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Halodurans Length = 263 | Back alignment and structure |
|
| >pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269 | Back alignment and structure |
|
| >pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269 | Back alignment and structure |
|
| >pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From Mycobacterium Avium Length = 267 | Back alignment and structure |
|
| >pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Acinetobacter Baumannii Length = 266 | Back alignment and structure |
|
| >pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 256 | Back alignment and structure |
|
| >pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From Mycobacterium Marinum Length = 261 | Back alignment and structure |
|
| >pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From Mycobacterium Marinum Length = 298 | Back alignment and structure |
|
| >pdb|3L3S|A Chain A, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE FAMILY Protein From Silicibacter Pomeroyi Length = 263 | Back alignment and structure |
|
| >pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis, Iodide Soak Length = 333 | Back alignment and structure |
|
| >pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803 1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In Complex With Bicarbonate Length = 275 | Back alignment and structure |
|
| >pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 282 | Back alignment and structure |
|
| >pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE (Crotonase) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 Length = 268 | Back alignment and structure |
|
| >pdb|3HP0|A Chain A, Crystal Structure Of A Putative Polyketide Biosynthesis Enoyl-Coa Hydratase (Pksh) From Bacillus Subtilis Length = 267 | Back alignment and structure |
|
| >pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 715 | Back alignment and structure |
|
| >pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding Homologue Of Enoyl-Coa Hydratase Length = 272 | Back alignment and structure |
|
| >pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycobacterium Thermoresistibile Length = 279 | Back alignment and structure |
|
| >pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Rhodopseudomonas Palustris Cga009 Length = 275 | Back alignment and structure |
|
| >pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase Domain-Containing Protein 3 (Echdc3) Length = 287 | Back alignment and structure |
|
| >pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium Carotovora, Apo Enzyme Length = 250 | Back alignment and structure |
|
| >pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) Length = 279 | Back alignment and structure |
|
| >pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa Length = 727 | Back alignment and structure |
|
| >pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional Enzyme Type 1 (rpmfe1) In Apo Form Length = 742 | Back alignment and structure |
|
| >pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional Enzyme Type 1 (rpmfe1) Complexed With 2trans-hexenoyl-coa Length = 742 | Back alignment and structure |
|
| >pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From Mycobacterium Marinum In Complex With An Unknown Ligand Length = 272 | Back alignment and structure |
|
| >pdb|1EF8|A Chain A, Crystal Structure Of Methylmalonyl Coa Decarboxylase Length = 261 | Back alignment and structure |
|
| >pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 262 | Back alignment and structure |
|
| >pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of Rpfc Length = 305 | Back alignment and structure |
|
| >pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2 Length = 725 | Back alignment and structure |
|
| >pdb|3ISA|A Chain A, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE FROM Bordetella Parapertussis Length = 254 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363 | Back alignment and structure |
|---|
Score = 469 bits (1210), Expect = e-167
Identities = 144/370 (38%), Positives = 220/370 (59%), Gaps = 18/370 (4%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-R 64
++VL + ++TLNRP+ LNAL+ MI ++ +++E D L+I+KG G +
Sbjct: 3 DAAEEVLLGKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGK 62
Query: 65 AFCAGGDVAAVVRGINEG----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
AFCAGGD+ + FF +E++LN + + KP V++++GI MGGG G+S+
Sbjct: 63 AFCAGGDIRVISEAEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSV 122
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGL 180
HG+FRVATE +FAMPETA+GLFPD+G YFL RL G G ++ LTG RL G ++ G+
Sbjct: 123 HGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGI 182
Query: 181 ATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAY---HWMDVIDKCF 237
ATHFV S +LA+LEE L + S I++V++ + E + ++ MD I+ CF
Sbjct: 183 ATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCF 242
Query: 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIR 297
S TVEEI+ L+ + ++ + ++ + K SPTSLKI+LR + EG + + + L
Sbjct: 243 SANTVEEIIENLQQD----GSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTM 298
Query: 298 EYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWE 357
EYR+ M G DF EG RA+L+DKD++PKWKP+ L+ V + ++ +F +
Sbjct: 299 EYRLSQACMRG---HDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGSS--- 352
Query: 358 DIKLPARSNL 367
D+K
Sbjct: 353 DLKFAENLYF 362
|
| >3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407 | Back alignment and structure |
|---|
Score = 445 bits (1147), Expect = e-156
Identities = 109/370 (29%), Positives = 190/370 (51%), Gaps = 27/370 (7%)
Query: 1 MASAQSQEDQVLEEE-----TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVK 55
A+ V+ + V ++TLN + LNAL M+ + ++ D +
Sbjct: 29 KAAHSFATQNVVFQTLATASGKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIA 88
Query: 56 LLILKGKG-RAFCAGGDVAAVVRGINEG--------AKFFSKEFILNYLMATYTKPQVSI 106
++L G G +AFCAGGDV A+ FF +E+ L+YL+ TY KP +
Sbjct: 89 CVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEYRLDYLLHTYGKPVLVW 148
Query: 107 LNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLT 166
+GIVMGGG G+ +V TE S AMPE +GL+PD+G SYFL+R+PG G ++GLT
Sbjct: 149 GDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPGKMGLFLGLT 208
Query: 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPA-----VISAVIDKFSLEPYL 221
++ A+ GLA H++ L+ +A+ ++ SD + +I++ S + +
Sbjct: 209 AYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDI 268
Query: 222 KDHSAY--HWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKIS 279
+ ++ID+ + ++ +I++ + + ST+ +AW+S A ++ SP S ++
Sbjct: 269 PKGDSVLAESQEMIDRLMA-GSLTDIVTRMSTLSTD--EAWLSKACATMLAGSPISWHLA 325
Query: 280 LRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWKPSKLELV 339
+ G + QC E + +V DF EG RA+L+DKDK PKW+ + ++ V
Sbjct: 326 YIQTQLGTKLSLAQCFKWELTVSVNVCA---KGDFCEGVRALLIDKDKQPKWQFADVQSV 382
Query: 340 NDNMVDQYFS 349
+++++ +
Sbjct: 383 PNSVIEDILT 392
|
| >2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 1e-40
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
+ + E V LTLNRP QLNA + QM + + + ++ D NV+ +++ G GRAFCA
Sbjct: 3 ETIRYEVKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCA 62
Query: 69 GGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
G D++ V ++ G S+ + + KP V+ +NG G G +++ FR+ +
Sbjct: 63 GEDLSGVTEEMDHGDVLRSRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLS 122
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
E + FA +GL PD G Y+L RL VG + G ++ E A GL
Sbjct: 123 EKASFAPAFIHVGLVPDAGHLYYLPRL-------VGRAKALELAVLGEKVTAEEAAALGL 175
Query: 181 ATHFVPSSRLALLEEAL 197
AT +P S EE
Sbjct: 176 ATKVIPLS--DWEEEVK 190
|
| >3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Length = 266 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-40
Identities = 44/203 (21%), Positives = 76/203 (37%), Gaps = 22/203 (10%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
S + V L +NRP NAL ++ + + + + +V++++L+G
Sbjct: 2 SLHPHLNANLEGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHD 61
Query: 66 FCAGGDV---AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHG 122
F AG D+ V+ N G F+L A +KP + + G+ +G G + +
Sbjct: 62 FTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQA 121
Query: 123 RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAE 174
A ++F +P +LGL P+ GAS L + G T + +
Sbjct: 122 DLVFADNTALFQIPFVSLGLSPEGGASQLLVKQ-------AGYHKAAELLFTAKKFNAET 174
Query: 175 MRACGLATHFVPSSRLALLEEAL 197
GL V A
Sbjct: 175 ALQAGLVNEIVE----DAYATAQ 193
|
| >2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Length = 243 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 4e-40
Identities = 41/195 (21%), Positives = 68/195 (34%), Gaps = 21/195 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
L E + V +T+ N S ++ L F + K++IL G G F +G
Sbjct: 5 QLTELGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGA 64
Query: 71 DVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN 130
++R + L+ L+ P ++ + G GGG + ++ F V ++
Sbjct: 65 SKEFLIRKTRGEVEVLD----LSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQE 120
Query: 131 SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGLAT 182
SV+A G P S L +G TG G E+ G+
Sbjct: 121 SVYATNFMKYGFTPVGATSLILREK-------LGSELAQEMIYTGENYRGKELAERGIPF 173
Query: 183 HFVPSSRLALLEEAL 197
V +L A
Sbjct: 174 PVVSRQD--VLNYAQ 186
|
| >3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Length = 263 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 9e-40
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 22/201 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA-FCAG 69
V E + +TL+ P + N L A++ + LLE + ++++ +IL+ K RA F +G
Sbjct: 6 VHTEIQNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSG 65
Query: 70 GDVAAVVRGINEGAKFFSKEFILNY-----LMATYTKPQVSILNGIVMGGGAGVSIHGRF 124
+ ++ ++ + +E + + T K V+++NG GGG + +
Sbjct: 66 PRLEDLLICASDQSDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDR 125
Query: 125 RVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMR 176
R+A + F +G+ PD+GASYFL R+ +G L G E
Sbjct: 126 RIALRRAKFLENFHKMGISPDLGASYFLPRI-------IGYEQTMNLLLEGKLFTSEEAL 178
Query: 177 ACGLATHFVPSSRLALLEEAL 197
GL + + L E
Sbjct: 179 RLGLIQEICENKQE-LQERVK 198
|
| >3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Length = 276 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 1e-39
Identities = 54/202 (26%), Positives = 77/202 (38%), Gaps = 12/202 (5%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M E + +RI+TLNRP LN+++ + L L+QR D + ++
Sbjct: 22 MVYDMPTE--IDVRADGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVIT 79
Query: 61 GKGRAFCAGGDVAAVVRGINE---GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
G GRAF AGGD + + AK + MA P V+ +NG +G G
Sbjct: 80 GAGRAFSAGGDFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCS 139
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFF--GEYVGLTGARLDGAEM 175
+ EN+ A P +GL G EY LTG R+
Sbjct: 140 LVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYA-LTGTRISAQRA 198
Query: 176 RACGLATHFVPSSRLALLEEAL 197
GLA H + EA+
Sbjct: 199 VELGLANHVAD----DPVAEAI 216
|
| >2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 2e-39
Identities = 42/203 (20%), Positives = 76/203 (37%), Gaps = 23/203 (11%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
D V+ ++ F IL + + N+L+ +++ + D + KL++L G FC
Sbjct: 5 RDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAAD-DSKLVLLSAVGSVFC 63
Query: 68 AGGDVAAVVRGINEGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVSIHG 122
G D +R + + K S + + KP + +NG +G GA +
Sbjct: 64 CGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLC 123
Query: 123 RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAE 174
A E + F P T G PD ++ ++ +G L+G +L E
Sbjct: 124 DVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKI-------MGGASANEMLLSGRKLTAQE 176
Query: 175 MRACGLATHFVPSSRLALLEEAL 197
GL + +E +
Sbjct: 177 ACGKGLVSQVFWPG--TFTQEVM 197
|
| >3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} Length = 265 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 2e-39
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 17/197 (8%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
++ EE V +LTL+ P N+ + ++ +L +QR + D V++++L G AFC+
Sbjct: 7 TELHEEIRDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCS 66
Query: 69 GGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
G ++A + P ++ +NG +G G +++H R+
Sbjct: 67 GAQISAAAETFAAPRNPDFSASPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILA 126
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
E +A+P+ G+ PD A + L RL VG LTGA GL
Sbjct: 127 EEGRYAIPQVRFGVAPDALAHWTLPRL-------VGTAVAAELLLTGASFSAQRAVETGL 179
Query: 181 ATHFVPSSRLALLEEAL 197
A +P+ + +L AL
Sbjct: 180 ANRCLPAGK--VLGAAL 194
|
| >1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 7e-39
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 23/203 (11%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
+ + V +T+ PR NALS + + + + R E D +V +++ G AFCA
Sbjct: 3 EAIGHRVEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCA 62
Query: 69 GGDVAAV-VRGINEGAKFFSKEFILNY-----LMATYTKPQVSILNGIVMGGGAGVSIHG 122
G + + + G + + L + + +P ++ +NG+ GGG G+S+
Sbjct: 63 GFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLAS 122
Query: 123 RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAE 174
+ +++ F +G+ D SY L+R+ VG LT L E
Sbjct: 123 DMAICADSAKFVCAWHTIGIGNDTATSYSLARI-------VGMRRAMELMLTNRTLYPEE 175
Query: 175 MRACGLATHFVPSSRLALLEEAL 197
+ GL + P E A
Sbjct: 176 AKDWGLVSRVYPKD--EFREVAW 196
|
| >2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 9e-39
Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 23/209 (11%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
+ + D V+++E F +I+ R + NAL+ ++I ++ D + KL++
Sbjct: 17 RGSSTYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAAD-DSKLVLFSA 75
Query: 62 KGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY-----LMATYTKPQVSILNGIVMGGGA 116
G FC G D V+ + S E + + KP V +NG +G GA
Sbjct: 76 AGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGA 135
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGA 168
+ A E + F P T G PD +S ++ +G + G
Sbjct: 136 SILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKM-------MGKASANEMLIAGR 188
Query: 169 RLDGAEMRACGLATHFVPSSRLALLEEAL 197
+L E A GL + + +E +
Sbjct: 189 KLTAREACAKGLVSQVFLTG--TFTQEVM 215
|
| >3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-38
Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 32/207 (15%)
Query: 4 AQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG 63
+ + E V + L+RP +LNA+ M+ L + E D +V+ ++L G G
Sbjct: 1 GPGSMNGISVEHDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAG 60
Query: 64 RAFCAGGDV-----AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGV 118
RAFC+GGD+ A N + + + KP ++ ++G +G G +
Sbjct: 61 RAFCSGGDLTGGDTAGAADAANRVVR----------AITSLPKPVIAGVHGAAVGFGCSL 110
Query: 119 SIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARL 170
++ VA S F + T +GL PD GAS L L +G +T ++
Sbjct: 111 ALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLL-------IGRARTSRMAMTAEKI 163
Query: 171 DGAEMRACGLATHFVPSSRLALLEEAL 197
A G+ +H +
Sbjct: 164 SAATAFEWGMISHITSAD--EYESVLT 188
|
| >3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 2e-38
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 19/199 (9%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
+ ++ + VR LTLNRP LNA + + + D V +++L G GR F A
Sbjct: 6 VTLQIDDDNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSA 65
Query: 69 GGDVAAVVRGINEGAKFFSKEFILNYL--MATYTKPQVSILNGIVMGGGAGVSIHGRFRV 126
G D+A + I + K + +A + KP + +NG+ +G GA + +
Sbjct: 66 GTDLAEMQARITDPNFSEGKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAF 125
Query: 127 ATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRAC 178
+ + P T+LG+ P+ +SY L +L VG ++ +D E
Sbjct: 126 MSSTARLKCPFTSLGVAPEAASSYLLPQL-------VGRQNAAWLLMSSEWIDAEEALRM 178
Query: 179 GLATHFVPSSRLALLEEAL 197
GL LL EA
Sbjct: 179 GLVWRICSPE--ELLPEAR 195
|
| >3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Length = 298 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 2e-38
Identities = 49/214 (22%), Positives = 80/214 (37%), Gaps = 26/214 (12%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M++A +Q+ + E V I+T NR +LNA + + R E D +++++L
Sbjct: 22 MSAADAQDAVLYEATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLT 81
Query: 61 GKGRAFCAGGDVAAVVRGINEGAKFFSKEF---------ILNYLMATYTKPQVSILNGIV 111
G+GR FCAG + + + + + KP ++ +NG
Sbjct: 82 GRGRGFCAGAYLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGPC 141
Query: 112 MGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG------- 164
+G G ++ R A + FA GL + G S+ L RL
Sbjct: 142 VGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRL-------TSWAVALDL 194
Query: 165 -LTGARLDGAEMRACGLATHFVPSSRLALLEEAL 197
L+G E GL V L+ AL
Sbjct: 195 LLSGRTFLAEEAAQLGLVKEVVTPE--QLMPRAL 226
|
| >3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Length = 279 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 3e-38
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+ E T V +TL RP +LNAL+ + + L +L V+ L+L G+GR FC+GG
Sbjct: 19 LRVEITDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGG 78
Query: 71 DVAAVVRGINEGAKFFSKEFILNY-----LMATYTKPQVSILNGIVMGGGAGVSIHGRFR 125
DV ++ +F + P ++ L+G+ G GA +++ FR
Sbjct: 79 DVDEIIGATLSMDTARLLDFNRMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFR 138
Query: 126 VATENSVFAMPETALGLFP-DIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMR 176
VA ++ FA T +GL D+GA+Y L R+ VG + G + E
Sbjct: 139 VADPSTRFAFLFTRVGLSGGDMGAAYLLPRV-------VGLGHATRLLMLGDTVRAPEAE 191
Query: 177 ACGLATHFVPSSRLALLEEAL 197
GL + E A
Sbjct: 192 RIGLISELTEEG--RADEAAR 210
|
| >1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 7e-38
Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 30/227 (13%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M+ Q +++ I+ L P LNAL + L EL + + + +V I++
Sbjct: 1 MSQEIRQNEKISYRIEGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQ 60
Query: 61 GKGRAFCAGGDVAAVVRGINEGAK------------FFSKEFILNYLMATYTKPQVSILN 108
GR F +G D + + + F ++ + ++K + LN
Sbjct: 61 SSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLN 120
Query: 109 GIVMGGGAGVSIHGRFRVATENSV-FAMPETALGLFPDIGASYFLSRLPGFFGEYVG--- 164
G +G A + + + V P LGL + G + L G
Sbjct: 121 GPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLK-------FGTNT 173
Query: 165 -----LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPA 206
+ M G + + EA +
Sbjct: 174 TYECLMFNKPFKYDIMCENGFISKNFNMP--SSNAEAFNAKVLEELR 218
|
| >3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} PDB: 3q1t_A Length = 272 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 2e-37
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 21/197 (10%)
Query: 12 LEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGD 71
E V L L+ P LN++ QM L +++ + D +V++++++G+G+AF +GG
Sbjct: 17 FEPGEHGVLNLVLDSP-GLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGS 75
Query: 72 VAAVVRGIN---EGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
+ I + + L + KP VS + G +G G V++ VA+
Sbjct: 76 FELIDETIGDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVAS 135
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
+ T LG+ A+ L VG LT L G E GL
Sbjct: 136 ATAKIIDGHTKLGVAAGDHAAICWPLL-------VGMAKAKYYLLTCETLSGEEAERIGL 188
Query: 181 ATHFVPSSRLALLEEAL 197
+ V +L A
Sbjct: 189 VSTCVDDD--EVLPTAT 203
|
| >3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Length = 290 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 3e-37
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
S +++ + ++TLNRP ++NA++ ++ ++ D++V+ +++
Sbjct: 16 TQGPGSMSFVLVDRPRPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVIT 75
Query: 61 GKGRAFCAGGDVAAVVRGINEGAK---FFSKEFILNY-----LMATYTKPQVSILNGIVM 112
G G+ FC+G D + + G + + + +P ++ +NG +
Sbjct: 76 GAGKGFCSGADQKSAGPIPHIGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAAI 135
Query: 113 GGGAGVSIHGRFRVATENSVFAMPETALGLFP-DIGASYFLSRLPGFFGEYVG------- 164
GGG +++ RVA++++ F GL ++G SY L R +G
Sbjct: 136 GGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRA-------IGTSRASDI 188
Query: 165 -LTGARLDGAEMRACGLATHFVPSSRLALLEEAL 197
LTG +D E GL + V S LLEE
Sbjct: 189 MLTGRDVDADEAERIGLVSRKVASES--LLEECY 220
|
| >3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Length = 258 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 3e-37
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 13/204 (6%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M+ A S +V E+ + ++ L+R + NA + M++ L YE + +L
Sbjct: 4 MSEANSGPGRVTREQRGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLF 63
Query: 61 GKGRAFCAGGDVAAVVRGINEGAKFFSKEFI--LNYLMATYTKPQVSILNGIVMGGGAGV 118
G F AG D+ + + + + + +KP V + G G +
Sbjct: 64 AHGEHFTAGLDLMELAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTCWTAGIEL 123
Query: 119 SIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFG-----EYVGLTGARLDGA 173
++ VA + FA E G+ P G++ R P G Y+ LTG D
Sbjct: 124 MLNADIAVAARGTRFAHLEVLRGIPPLGGSTV---RFPRAAGWTDAMRYI-LTGDEFDAD 179
Query: 174 EMRACGLATHFVPSSRLALLEEAL 197
E L T V L AL
Sbjct: 180 EALRMRLLTEVVEPGE--ELARAL 201
|
| >3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Length = 265 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 4e-37
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 7/196 (3%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
S + + +V ++ LNRP + NA M+ L YETD++++ +L G+G
Sbjct: 6 SDYETLRIRRDGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPL 65
Query: 66 FCAGGDVAAVVRGINEGAKFFSKEFI--LNYLMATYTKPQVSILNGIVMGGGAGVSIHGR 123
F AG D+A+V I GA + I +KP + ++G V+ G +++
Sbjct: 66 FTAGLDLASVAAEIQGGASLTPEGGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAAD 125
Query: 124 FRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFG--EYVGLTGARLDGAEMRACGLA 181
+A E + FA E G++P GA+ R G+ ++ LT D E G+
Sbjct: 126 IVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWM-LTADTFDAVEAHRIGIV 184
Query: 182 THFVPSSRLALLEEAL 197
VP ++ A+
Sbjct: 185 QEIVPVGE--HVDTAI 198
|
| >3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Length = 256 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 8e-37
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
+ + +L + T VR LTLNRP+ NALSA++ S + D +V ++I+ G
Sbjct: 3 GSMADSPVLLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGA 62
Query: 63 GRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHG 122
FCAG D+ + E K TKP + +NG + GG ++++
Sbjct: 63 DPVFCAGLDLKELGDT-TELPDISPK-------WPDMTKPVIGAINGAAVTGGLELALYC 114
Query: 123 RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAE 174
+A+EN+ FA +GL P G S L + VG LTG L +
Sbjct: 115 DILIASENAKFADTHARVGLMPTWGLSVRLPQK-------VGVGLARRMSLTGDYLSAQD 167
Query: 175 MRACGLATHFVPSSRLALLEEAL 197
GL T V LL A
Sbjct: 168 ALRAGLVTEVVAHDD--LLTAAR 188
|
| >3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 8e-37
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 8/197 (4%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V +T +RP N ++ +I L++ + ET + V +++L+G FC G D + +
Sbjct: 17 VCYITFHRPEANNTINDTLIEECLQVLNQCETST-VTVVVLEGLPEVFCFGADFQEIYQE 75
Query: 79 INEGAKFFSKEFILNYLMAT-YTKPQVSI--LNGIVMGGGAGVSIHGRFRVATENSVFAM 135
+ G K S + L L T P V+I + G V GG G +A + + F++
Sbjct: 76 MKRGRKQASSQEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSL 135
Query: 136 PETALGLFPDIGASYFLSRLPGFFG--EYVGLTGARLDGAEMRACGLATHFVPSSRLALL 193
E GL+P FL R G L + E GL F S + L
Sbjct: 136 SELLFGLYPACV-LPFLIRRIGRQKAHYMT-LMTKPISVQEASEWGLIDAFDAESDVLLR 193
Query: 194 EEALYKVNSSDPAVISA 210
+ L + +
Sbjct: 194 KHLLRLRRLNKKGIAHY 210
|
| >2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 9e-37
Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 23/202 (11%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
+ ++ + + NRP++ NA++ +M ++ + D ++ + +L G G + +
Sbjct: 26 ETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSS 84
Query: 69 GGDVAAVVRGINEGAKFFSKEFILNY-----LMATYTKPQVSILNGIVMGGGAGVSIHGR 123
G D+ G + +K + + KP ++++NG +G +
Sbjct: 85 GNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFD 144
Query: 124 FRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEM 175
A++ + F P + LG P+ +SY ++ + + G +L E
Sbjct: 145 AVYASDRATFHTPFSHLGQSPEGCSSYTFPKI-------MSPAKATEMLIFGKKLTAGEA 197
Query: 176 RACGLATHFVPSSRLALLEEAL 197
A GL T P S +E
Sbjct: 198 CAQGLVTEVFPDS--TFQKEVW 217
|
| >1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Length = 264 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-36
Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 10/203 (4%)
Query: 1 MASAQSQ-EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLIL 59
+AS +++ V +T R +LNA+ + L +++ E V+ ++L
Sbjct: 2 LASLEARYPGLAFAWPRPGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLL 60
Query: 60 KGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILN---YLMATYTKPQVSILNGIVMGGGA 116
+G+G F AGG + + + +P V+ + + +G G
Sbjct: 61 RGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGL 120
Query: 117 GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFF--GEYVGLTGARLDGAE 174
+++ V + + LG+ A L G ++ L L G E
Sbjct: 121 ALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKYHL-LLNEPLTGEE 179
Query: 175 MRACGLATHFVPSSRLALLEEAL 197
GL V + E+AL
Sbjct: 180 AERLGLVALAVEDE--KVYEKAL 200
|
| >2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Length = 263 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 3e-36
Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 21/197 (10%)
Query: 12 LEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGD 71
+ + + + ++ + + + F D + +++IL G G A+ A D
Sbjct: 27 FHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEID 86
Query: 72 VAAVVRGIN--EGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATE 129
++ N E K + + + + P +S +NG + + +A+E
Sbjct: 87 FPSLGDVTNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLHSE-YILTTDIILASE 145
Query: 130 NSVFA-MPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
N+VF MP G+ P G +G T +L + +
Sbjct: 146 NTVFQDMPHLNAGIVPGDGVHILWPLA-------LGLYRGRYFLFTQEKLTAQQAYELNV 198
Query: 181 ATHFVPSSRLALLEEAL 197
+P S+ L+E A
Sbjct: 199 VHEVLPQSK--LMERAW 213
|
| >2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Length = 250 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 5e-36
Identities = 48/198 (24%), Positives = 81/198 (40%), Gaps = 21/198 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAG 69
V EE + VR++TL+ P + N S + + + + R D +V+ +++ G R+F AG
Sbjct: 2 VFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAG 61
Query: 70 GDVAAVV-RGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVA 127
GD V +E + + I Y + KP ++ ++G +G G ++ R+
Sbjct: 62 GDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLM 121
Query: 128 TENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACG 179
+ F MPE G+ +GA+ L G LD
Sbjct: 122 ASTANFVMPELKHGIGCSVGAA-ILGFT-------HGFSTMQEIIYQCQSLDAPRCVDYR 173
Query: 180 LATHFVPSSRLALLEEAL 197
L V SS LL+ A+
Sbjct: 174 LVNQVVESSA--LLDAAI 189
|
| >3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Length = 264 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 6e-36
Identities = 48/204 (23%), Positives = 82/204 (40%), Gaps = 26/204 (12%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
A Q + + V + L RP + NAL++Q++ L + ++ D + + ++L G
Sbjct: 14 AQTQGPGSMIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAG-DGSARAIVLTG 72
Query: 62 KGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIH 121
+G AFCAG D++ A + + L+ M P V +NG +G G +++
Sbjct: 73 QGTAFCAGADLSGDA----FAADYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQ 128
Query: 122 GRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGA 173
RV ++ F P + GL D + LS L VG L+ +L
Sbjct: 129 CDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSL-------VGHGRARAMLLSAEKLTAE 181
Query: 174 EMRACGLATHFVPSSRLALLEEAL 197
G+A L +A
Sbjct: 182 IALHTGMANRIGT------LADAQ 199
|
| >1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Length = 257 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 7e-36
Identities = 37/197 (18%), Positives = 68/197 (34%), Gaps = 20/197 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+ E V ++T++ + ++ L F D K++IL G G +FC
Sbjct: 18 IRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEI 77
Query: 71 DVAAVVRG-INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATE 129
D + G ++ + + L + + P ++ +NG + + + +A E
Sbjct: 78 DFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNG-PVTNAPEIPVMSDIVLAAE 136
Query: 130 NSVFA-MPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
++ F P G+ P GA + +G LTG LD G
Sbjct: 137 SATFQDGPHFPSGIVPGDGAHVVWPHV-------LGSNRGRYFLLTGQELDARTALDYGA 189
Query: 181 ATHFVPSSRLALLEEAL 197
+ LL A
Sbjct: 190 VNEVLSEQE--LLPRAW 204
|
| >3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Length = 254 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 7e-36
Identities = 40/203 (19%), Positives = 69/203 (33%), Gaps = 22/203 (10%)
Query: 4 AQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG 63
+ S + E TL+RP + NALSA+++ L++ + V LL+ G G
Sbjct: 2 SLSASLPLAIERRPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHREQ-VPLLVFAGAG 60
Query: 64 RAFCAGGDVAAVV-RGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHG 122
R F AG D + + + +L +A +++ +G G G +
Sbjct: 61 RNFSAGFDFTDYETQSEGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAAC 120
Query: 123 RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAE 174
++R T + F MP GL + + VG + D E
Sbjct: 121 KWRYCTPEAGFRMPGLKFGLVL---GTRRFRDI-------VGADQALSILGSARAFDADE 170
Query: 175 MRACGLATHFVPSSRLALLEEAL 197
R G ++
Sbjct: 171 ARRIGFVRDCAAQAQ--WPALID 191
|
| >2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Length = 276 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 1e-35
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 23/211 (10%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M++ + + V E + + LNRP + NA+S + ++++ + E D +L+L
Sbjct: 1 MSTYEGRWKTVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLT 60
Query: 61 GKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY------LMATYTKPQVSILNGIVMGG 114
G G A+ AG D+ R ++ G + ++ L+ Y KP ++++NG GG
Sbjct: 61 GAGEAWTAGMDLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGG 120
Query: 115 GAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LT 166
G + + + + F + E G+ P S ++ VG +T
Sbjct: 121 GFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADT-------VGHRQSLMYIMT 173
Query: 167 GARLDGAEMRACGLATHFVPSSRLALLEEAL 197
G G + GL VP ++ L E +
Sbjct: 174 GKTFGGQKAAEMGLVNESVPLAQ--LREVTI 202
|
| >1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Length = 253 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-35
Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 10/193 (5%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+++ E V ++ LN P + N LS +M LL+ E D V+ ++L G+G+AF AG
Sbjct: 1 MVQVEKGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGA 60
Query: 71 DVAAVVR----GINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRV 126
D+A + R G E + L + + TY KP V+ +NG + GGAG+++ V
Sbjct: 61 DLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVV 120
Query: 127 ATENSVFAMPETALGLFPDIGASYFLSRLPGFFG--EYVGLTGARLDGAEMRACGLATHF 184
E + E +G + + L R G + + LTG ++ E +A GL
Sbjct: 121 MDEEARLGYTEVKIGFVAALVSVI-LVRAVGEKAAKDLL-LTGRLVEAREAKALGLVNRI 178
Query: 185 VPSSRLALLEEAL 197
P + LEEA
Sbjct: 179 APPGK--ALEEAK 189
|
| >3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Length = 263 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 4e-35
Identities = 55/207 (26%), Positives = 81/207 (39%), Gaps = 26/207 (12%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
SQ+ + E + V LTL R + LS MI+ L + +R D +V +L++ G GR
Sbjct: 4 SQDGLLGEVLSEGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRI 62
Query: 66 FCAGGDV-------AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGV 118
FCAG D+ A G F L +A KP ++++ GI G +
Sbjct: 63 FCAGHDLKEIGRHRADPDEGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIATAAGLQL 122
Query: 119 SIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARL 170
A+ + F +P G F A +SR+ +G LTGA
Sbjct: 123 MAACDLAYASPAARFCLPGVQNGGFCTTPA-VAVSRV-------IGRRAVTEMALTGATY 174
Query: 171 DGAEMRACGLATHFVPSSRLALLEEAL 197
D A GL +P + AL
Sbjct: 175 DADWALAAGLINRILPEA--ALATHVA 199
|
| >3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 7e-35
Identities = 41/192 (21%), Positives = 63/192 (32%), Gaps = 8/192 (4%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
V + ++ ++ + +N L M L E + D NV L++ G R F
Sbjct: 5 GPVTYTHDDAIGVIRMDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSG 62
Query: 69 GGDVAAVVRG-INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVA 127
G D+ + G F L+Y + +Y KP V G + GA + G RVA
Sbjct: 63 GFDLKVLTSGEAKPAIDMLRGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVA 122
Query: 128 TENSVFAMPETALGLFPDIGASYFLSRL--PGFFGEYVGLTGARLDGAEMRACGLATHFV 185
E A+G+ A L P + + G A G
Sbjct: 123 AHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAA-GLAKTFFGETALAAGFIDEIS 181
Query: 186 PSSRLALLEEAL 197
+L A
Sbjct: 182 LPEV--VLSRAE 191
|
| >3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} Length = 268 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-34
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+L E V +LT+NR + NA Q+++ + D+NV++++LK G+ F AG
Sbjct: 6 LLYEIQDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGA 65
Query: 71 DV----AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRV 126
D+ + E + L Y ++ KP ++++ G GGGAG++ +
Sbjct: 66 DLTWMQSMANFTEEENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAI 125
Query: 127 ATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRAC 178
A+ ++ F E LGL P + + Y + R +G ++ D +
Sbjct: 126 ASTSARFCFSEVKLGLIPAVISPY-VVRA-------IGERAAKMLFMSAEVFDATRAYSL 177
Query: 179 GLATHFVPSSRLALLEEAL 197
L H VP LLE L
Sbjct: 178 NLVQHCVPDD--TLLEFTL 194
|
| >3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} Length = 267 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 2e-34
Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 21/208 (10%)
Query: 2 ASAQSQEDQVLEEETS-FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
S + D T V LTLN P NALS ++S+L + + +D V++++L
Sbjct: 3 GSMDALVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLA 62
Query: 61 GKGRAFCAGGDVAAVVRGIN---EGAKFFSKEFILNYLMAT---YTKPQVSILNGIVMGG 114
G FCAG D++ G + + + LM P ++ ++G V G
Sbjct: 63 HTGGTFCAGADLSEAGSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAG 122
Query: 115 GAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-----FFGEYVGLTGAR 169
G G+ VA S FA+ E +G+ P I + L +L ++ LTG +
Sbjct: 123 GFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLPKLSARAAARYY-----LTGEK 177
Query: 170 LDGAEMRACGLATHFVPSSRLALLEEAL 197
D GL T L
Sbjct: 178 FDARRAEEIGLITMAAE----DLDAAID 201
|
| >3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} PDB: 3r9s_A 3r0o_A Length = 267 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 7e-34
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-R 64
+ L E V ++T+NRP NA++A + + + + + D V+ ++L G G +
Sbjct: 6 TDAPGALAERRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDK 65
Query: 65 AFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRF 124
+FCAG D+ A+ R N + Y+ KP ++ +NG +GGG +++
Sbjct: 66 SFCAGADLKAIARRENLYHPDHPEWGFAGYVRHFIDKPTIAAVNGTALGGGTELALASDL 125
Query: 125 RVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG----LTGARLDGAEMRACGL 180
VA E + F +PE GL G + R+ V LTG L A R GL
Sbjct: 126 VVADERAQFGLPEVKRGLIAAAGGVF---RIAEQLPRKVAMRLLLTGEPLSAAAARDWGL 182
Query: 181 ATHFVPSSRLALLEEAL 197
V + +L+ AL
Sbjct: 183 INEVVEAGS--VLDAAL 197
|
| >4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Length = 278 | Back alignment and structure |
|---|
Score = 124 bits (315), Expect = 1e-33
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
+ L E+ I+T+NRP + NALS +M+ ++E + R + D +++ IL G
Sbjct: 13 PANGESGPDALVEQRGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTG 72
Query: 62 KGRAFCAGGDVAAVVRG----INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAG 117
G FCAG D+ A + + + KP ++ + G + GG
Sbjct: 73 AGGYFCAGMDLKAATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTE 132
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG----LTGARLDGA 173
+ RVA E++ F + E L+P G++ RL V LTG + A
Sbjct: 133 ILQGTDIRVAAESAKFGISEAKWSLYPMGGSAV---RLVRQIPYTVACDLLLTGRHITAA 189
Query: 174 EMRACGLATHFVPSSRLALLEEAL 197
E + GL H VP + L +AL
Sbjct: 190 EAKEMGLVGHVVPDGQ--ALTKAL 211
|
| >3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Length = 265 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 1e-33
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 11/202 (5%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
+ S ++L E V ILT+NRP + NALS M+S+ + + D ++ IL G
Sbjct: 2 PGSMSAARELLVERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTG 61
Query: 62 KGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL--MATYTKPQVSILNGIVMGGGAGVS 119
G A+C GGD++ + A I L T TKP ++ +NG +GGG +
Sbjct: 62 AGSAYCVGGDLSDGWMVRDGSAPPLDPATIGKGLLLSHTLTKPLIAAVNGACLGGGCEML 121
Query: 120 IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG----LTGARLDGAEM 175
RV+ E++ F +PE GL P G+ RL LTG L E
Sbjct: 122 QQTDIRVSDEHATFGLPEVQRGLVPGAGSMV---RLKRQIPYTKAMEMILTGEPLTAFEA 178
Query: 176 RACGLATHFVPSSRLALLEEAL 197
GL H VP+ L++A
Sbjct: 179 YHFGLVGHVVPAGT--ALDKAR 198
|
| >3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Length = 286 | Back alignment and structure |
|---|
Score = 125 bits (315), Expect = 1e-33
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 20/206 (9%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
+ S+ + + + V LTLNRP+ NALS M++ L E F D +V+ ++L
Sbjct: 19 PGSMSEPLLLQDRDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAA 78
Query: 62 KGRAFCAGGDVAAVV--RGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVS 119
G+AFCAG D+ + K F++ + + P ++ ++GI G +
Sbjct: 79 SGKAFCAGHDLKEMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAGCQLV 138
Query: 120 IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLD 171
VAT ++ FA+ +GLF LSR VG +TG +
Sbjct: 139 AMCDLAVATRDARFAVSGINVGLFCSTPGVA-LSRN-------VGRKAAFEMLVTGEFVS 190
Query: 172 GAEMRACGLATHFVPSSRLALLEEAL 197
+ + GL V AL +E
Sbjct: 191 ADDAKGLGLVNRVVAPK--ALDDEIE 214
|
| >3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Length = 262 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 4e-33
Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 10/198 (5%)
Query: 4 AQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG 63
++ + V E+ V + LNRP NA+ + LL F ++ D + +L G
Sbjct: 6 SEEMQPAVRVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDN 65
Query: 64 RAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGR 123
FCAG D+ A+ + +KP ++ ++G + GG +++
Sbjct: 66 GTFCAGADLKAMGTDRGNEL-HPHGPGPMGPSRLRLSKPVIAAISGHAVAGGIELALWCD 124
Query: 124 FRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG----LTGARLDGAEMRACG 179
RV E++V + G+ G + RLP G LTG + E G
Sbjct: 125 LRVVEEDAVLGVFCRRWGVPLIDGGTI---RLPRLIGHSRAMDLILTGRPVHANEALDIG 181
Query: 180 LATHFVPSSRLALLEEAL 197
L V + E A
Sbjct: 182 LVNRVVARGQ--AREAAE 197
|
| >1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Length = 272 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 5e-33
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 23/212 (10%)
Query: 2 ASAQSQEDQV----LEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLL 57
+S ED++ LEEE + +L +NR N+LS +I L + ++D V+ +
Sbjct: 1 SSEMKTEDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTI 60
Query: 58 ILKGKG-RAFCAGGDVAA-VVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115
I++ + FCAG D+ +E F SK + +A P ++ ++G+ +GGG
Sbjct: 61 IIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGG 120
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTG 167
+++ RVA ++ + ET L + P G + L R +G +
Sbjct: 121 LELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRA-------IGMSLAKELIFSA 173
Query: 168 ARLDGAEMRACGLATHFVPSSRL--ALLEEAL 197
LDG E +A GL +H + ++ A +AL
Sbjct: 174 RVLDGKEAKAVGLISHVLEQNQEGDAAYRKAL 205
|
| >3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Length = 265 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 6e-33
Identities = 51/201 (25%), Positives = 83/201 (41%), Gaps = 13/201 (6%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
E +VL E+ + I+T+NRP+ N+++A + L + R + D+ + + IL
Sbjct: 7 SELNGDTEPEVLVEQRDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILT 66
Query: 61 GKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
G G +FCAG D+ A G + L + KP ++ + G + GG +++
Sbjct: 67 GAGGSFCAGMDLKA----FARGENVVVEGRGLGFTERPPAKPLIAAVEGYALAGGTELAL 122
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG----LTGARLDGAEMR 176
VA +S F +PE GL G RLP + LTG L
Sbjct: 123 ATDLIVAARDSAFGIPEVKRGLVAGGGGLL---RLPERIPYAIAMELALTGDNLSAERAH 179
Query: 177 ACGLATHFVPSSRLALLEEAL 197
A G+ L+ A+
Sbjct: 180 ALGMVNVLAEPGA--ALDAAI 198
|
| >3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Length = 275 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 9e-33
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 20/205 (9%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
A+ + ++ + V + LNRP++ NAL+ +++ L + + ++ +++ G
Sbjct: 9 AATIADPSTLVVDTVGPVLTIGLNRPKKRNALNDGLMAALKDCLT--DIPDQIRAVVIHG 66
Query: 62 KGRAFCAGGDVAAVV-RGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
G F AG D++ + R EG + + P ++ L G V+GGG ++
Sbjct: 67 IGDHFSAGLDLSELRERDATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAVIGGGLELAC 126
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDG 172
RVA ++ +A+PE + G+F G S L RL +G LTG
Sbjct: 127 AAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRL-------IGVARMADMMLTGRVYSA 179
Query: 173 AEMRACGLATHFVPSSRLALLEEAL 197
AE G + + + + ++AL
Sbjct: 180 AEGVVHGFSQYLIENGS--AYDKAL 202
|
| >3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Length = 256 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-32
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
S D+VL E+ V ++T+NRP NA++ + L + ++ +++ + I+ G G
Sbjct: 4 SMADEVLIEQRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGN 63
Query: 66 FCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFR 125
FCAG D+ A V G ++ + KP ++ + G + GG + +
Sbjct: 64 FCAGMDLKAFVSGEAVLSERGLG-----FTNVPPRKPIIAAVEGFALAGGTELVLSCDLV 118
Query: 126 VATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG----LTGARLDGAEMRACGLA 181
VA ++ F +PE GL G RLP V LTG + G
Sbjct: 119 VAGRSAKFGIPEVKRGLVAGAGGLL---RLPNRIPYQVAMELALTGESFTAEDAAKYGFI 175
Query: 182 THFVPSSRLALLEEAL 197
V + L+ AL
Sbjct: 176 NRLVDDGQ--ALDTAL 189
|
| >3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Length = 265 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 3e-32
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAG 69
++ T V ++LNR RQ N+LS ++ L + + ++N +++IL G G +AFCAG
Sbjct: 11 SVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAG 70
Query: 70 GDVAA-VVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
D+ + S ++ +P ++ +NGI +GGG +S+ FR+A
Sbjct: 71 ADLKERAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAA 130
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
E++ + ET L + P G + L RL +G TG R+ E + GL
Sbjct: 131 ESASLGLTETTLAIIPGAGGTQRLPRL-------IGVGRAKELIYTGRRISAQEAKEYGL 183
Query: 181 ATHFVPSSRLALLEEAL 197
VP L E+A+
Sbjct: 184 VEFVVPVH--LLEEKAI 198
|
| >2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Length = 258 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 3e-32
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+ + V I+ L RP LNALS QM++ ++ + ++ + V++++L G+GRAF AG
Sbjct: 7 IAARQEGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGA 66
Query: 71 DVAAVVRGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATE 129
D+ + + ++ + ++ ++ P ++ +NG+ +GGG +++ VA+
Sbjct: 67 DIQEMAK--DDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASS 124
Query: 130 NSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGLA 181
+ F PE LG+ P G + L++L +G TGAR+ E G+
Sbjct: 125 AAEFGFPEVNLGVMPGAGGTQRLTKL-------IGPKRALEWLWTGARMSAKEAEQLGIV 177
Query: 182 THFVPSSRLALLEEAL 197
V L+EE +
Sbjct: 178 NRVVSPEL--LMEETM 191
|
| >3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Length = 278 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-31
Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+L E V I+TLNRP+ LNAL++Q+++ + + D ++ +I+ G +AF AG
Sbjct: 27 ILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGA 86
Query: 71 DVAAVVRGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATE 129
D+ + A F+ +F + +A P ++ + G +GGG +++ +A +
Sbjct: 87 DIKEMAD--LTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAAD 144
Query: 130 NSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGLA 181
+ F PE LG+ P +G S L+R +G LTG +D AE GL
Sbjct: 145 TAKFGQPEIKLGVLPGMGGSQRLTRA-------IGKAKAMDLILTGRTMDAAEAERSGLV 197
Query: 182 THFVPSSRLALLEEAL 197
+ VP+ LL EA
Sbjct: 198 SRVVPADD--LLTEAR 211
|
| >2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Length = 287 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 1e-31
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 24/208 (11%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
+S+ + +R + L+ P++ N LS M+ L +++K++I+
Sbjct: 26 GRRESEPRPTSARQLDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISA 85
Query: 62 KGRAFCAGGDVAAVVRGINEGAKFFSKEFIL-NYLMATYTK-PQVSI--LNGIVMGGGAG 117
+G F +G D+ + +G + ++ F + +M P I +NG+ G
Sbjct: 86 EGPVFSSGHDLKELTE--EQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQ 143
Query: 118 VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGAR 169
+ VA++ S FA P +GLF L+R V TG
Sbjct: 144 LVASCDIAVASDKSSFATPGVNVGLFCSTPGV-ALARA-------VPRKVALEMLFTGEP 195
Query: 170 LDGAEMRACGLATHFVPSSRLALLEEAL 197
+ E GL + VP + L EE +
Sbjct: 196 ISAQEALLHGLLSKVVPEAE--LQEETM 221
|
| >3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Length = 263 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-31
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
S + + V ++ L+RP LNAL+ + + +L+ + ++ D + +++
Sbjct: 2 PGSMTTYTTIATSRPVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVT 61
Query: 61 GKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSI 120
G RAF AG D+A +V A+ + + L KP V+ + G +GGG +++
Sbjct: 62 GSERAFAAGADIAEMVTLTPHQARERNLLSGWDSL-TQVRKPIVAAVAGYALGGGCELAM 120
Query: 121 HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDG 172
+A + + F PE LG+ P +G + L+R VG LTG L
Sbjct: 121 LCDLVIAADTARFGQPEITLGILPGLGGTQRLTRA-------VGKAKAMDLCLTGRSLTA 173
Query: 173 AEMRACGLATHFVPSSRLALLEEAL 197
E GL + VP++ LL+EAL
Sbjct: 174 EEAERVGLVSRIVPAAD--LLDEAL 196
|
| >1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Length = 275 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-31
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 21/203 (10%)
Query: 12 LEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGD 71
+ V + LNRP + NA++ L+E FQ+ DS+ + +++ G G+ F +G D
Sbjct: 7 VTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGID 66
Query: 72 VAAVVRGINEGAK-------FFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVS 119
+ + I + ++ ++ I Y + KP ++ ++G +GGG +
Sbjct: 67 LMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLI 126
Query: 120 IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY-----VGLTGARLDGAE 174
R T+++ F + E +GL D+G L RLP G + T ++ E
Sbjct: 127 SACDIRYCTQDAFFQVKEVDVGLAADVGT---LQRLPKVIGNRSLVNELTFTARKMMADE 183
Query: 175 MRACGLATHFVPSSRLALLEEAL 197
GL + P + +L A
Sbjct: 184 ALDSGLVSRVFP-DKDVMLNAAF 205
|
| >3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Length = 333 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 5e-31
Identities = 45/228 (19%), Positives = 80/228 (35%), Gaps = 51/228 (22%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
+ E T V +T NRP + NA+ A L L +R + D +V ++++ G+G FCA
Sbjct: 35 KTMTYEVTDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCA 94
Query: 69 GGDVAA---------------------VVRGINEGAKFFSKEFILNYLMATYT------- 100
G D++A + +N + +M+ +
Sbjct: 95 GFDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLM 154
Query: 101 ---KPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG 157
KP V ++G + GG +++H +A ++ P + P G +
Sbjct: 155 HCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHR-- 209
Query: 158 FFGEYVG--------LTGARLDGAEMRACGLATHFVPSSRLALLEEAL 197
+G TG + GA+ GLA + L
Sbjct: 210 -----LGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPA--DLDARTE 250
|
| >1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Length = 260 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 8e-31
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 20/194 (10%)
Query: 13 EEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDV 72
+ + S V ++ LNRP+ LNAL +I L + + +E D V ++L G +AF AG D+
Sbjct: 11 KGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADI 70
Query: 73 AAVVRGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENS 131
+ +S +F+ ++ + KP ++ +NG +GGG +++ A E +
Sbjct: 71 KEMQN--RTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKA 128
Query: 132 VFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGLATH 183
F PE LG P G + L+R VG LTG R+ + + GL +
Sbjct: 129 QFGQPEILLGTIPGAGGTQRLTRA-------VGKSLAMEMVLTGDRISAQDAKQAGLVSK 181
Query: 184 FVPSSRLALLEEAL 197
P L+EEA+
Sbjct: 182 IFPVET--LVEEAI 193
|
| >3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Length = 261 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 1e-30
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 20/197 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+ + + TLN NA+S+Q++ + EL + E D N++++++ G+GR F AG
Sbjct: 8 LSVRVEDHIAVATLNHA-PANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGA 66
Query: 71 DVAAVV-RGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
D+ + A ++ + + + +KP ++ ++G +GGG ++ R AT
Sbjct: 67 DIKEFTSVTEAKQATELAQLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFAT 126
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
E++ +PE LGL P + L R VG LT + GAE GL
Sbjct: 127 ESAKLGLPELTLGLIPGFAGTQRLPRY-------VGKAKACEMMLTSTPITGAEALKWGL 179
Query: 181 ATHFVPSSRLALLEEAL 197
L++ L
Sbjct: 180 VNGVFAEET--FLDDTL 194
|
| >3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} Length = 274 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 1e-30
Identities = 56/214 (26%), Positives = 79/214 (36%), Gaps = 28/214 (13%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
+ D + E +TLNRP LNALS MI+ L + E D V LL++ G
Sbjct: 4 SMPVDSFDTIKYEVDGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTG 63
Query: 62 KGRAFCAGGDVAAVVRG--------INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMG 113
GRAFC+G DV + + T KP ++ +NGI G
Sbjct: 64 TGRAFCSGADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCG 123
Query: 114 GGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------L 165
G +A+E + F P ++GL +SR+ + L
Sbjct: 124 AGMDWVTTTDIVIASEQATFFDPHVSIGLVAG-RELVRVSRV-------LPRSIALRMAL 175
Query: 166 TGA--RLDGAEMRACGLATHFVPSSRLALLEEAL 197
G R+ GL + V R LLE A
Sbjct: 176 MGKHERMSAQRAYELGLISEIVEHDR--LLERAH 207
|
| >3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Length = 279 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 3e-30
Identities = 41/210 (19%), Positives = 79/210 (37%), Gaps = 25/210 (11%)
Query: 2 ASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG 61
Q E + + + + +TLNRP NA + +++ L + R D++V +++L+
Sbjct: 13 RPEQRTEMYIDYDVSDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRA 72
Query: 62 KGRAFCAGGDVAAVVRGIN-EGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGG 115
G+ F AG D+ + +F YL KP ++ + G + GG
Sbjct: 73 NGKHFSAGHDLRGGGPVPDKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCISGG 132
Query: 116 AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTG 167
+ +A E+++F+ P + + + + +G TG
Sbjct: 133 LLLCWPCDLIIAAEDALFSDPVVLMDI--GGVEYHGHTWE-------LGPRKAKEILFTG 183
Query: 168 ARLDGAEMRACGLATHFVPSSRLALLEEAL 197
+ E+ G+ VP R L E
Sbjct: 184 RAMTAEEVAQTGMVNRVVPRDR--LDAETR 211
|
| >3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 232 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 6e-30
Identities = 35/192 (18%), Positives = 60/192 (31%), Gaps = 9/192 (4%)
Query: 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA 68
D V V LTLN ++NA+S +I + E D + +I+ G+
Sbjct: 6 DLVSYHLDDGVATLTLNNG-KVNAISPDVIIAFNAALDQAEKDRAI--VIVTGQPGILSG 62
Query: 69 GGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
G D+ + ++ L M ++ P + G + GA + + +R+
Sbjct: 63 GYDLKVMTSSAEAAINLVAQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGV 122
Query: 129 -ENSVFAMPETALGLFPDIGASYFLSRL--PGFFGEYVGLTGARLDGAEMRACGLATHFV 185
+ E +G+ F V + D A G V
Sbjct: 123 AGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSV-INAEMFDPEGAMAAGFLDKVV 181
Query: 186 PSSRLALLEEAL 197
L AL
Sbjct: 182 SVEE--LQGAAL 191
|
| >2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Length = 265 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-29
Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 21/208 (10%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M + ++++ + + + + L+ + N+ + D ++K++I+
Sbjct: 1 MTAVETKKQYLTVFKEDGIAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVM 59
Query: 61 GKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGAGV 118
+ F AG D+ + F +A + ++ L G +GGG +
Sbjct: 60 SDVPKFFSAGADINFLRSADPRFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGGGLEM 119
Query: 119 SIHGRFRVATENSV-FAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGAR 169
++ R + + +PE +LG+ G + L+RL +G +TG
Sbjct: 120 ALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARL-------IGYSRALDMNITGET 172
Query: 170 LDGAEMRACGLATHFVPSSRLALLEEAL 197
+ E GL P + E
Sbjct: 173 ITPQEALEIGLVNRVFPQAE--TRERTR 198
|
| >1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Length = 261 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 1e-29
Identities = 41/197 (20%), Positives = 76/197 (38%), Gaps = 20/197 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG--RAFCA 68
V + V ++ N R+LNALS I L++ ++ +IL+ + F A
Sbjct: 6 VNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRP-EIRCIILRAPSGSKVFSA 64
Query: 69 GGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
G D+ + G + + + ++ + KP +S++ G V GG + + +A
Sbjct: 65 GHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAA 124
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
S F+M LG+ ++ + L+R G T + + A G+
Sbjct: 125 STSTFSMTPVNLGVPYNLVGIHNLTRD-------AGFHIVKELIFTASPITAQRALAVGI 177
Query: 181 ATHFVPSSRLALLEEAL 197
H V L + L
Sbjct: 178 LNHVVEVEE--LEDFTL 192
|
| >4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Length = 277 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-29
Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 19/204 (9%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
S + V + L ++RP NA++ Q+ ++ ++ ++L G
Sbjct: 18 GPGSMNEFVSVVADQGLATLVVSRP-PTNAMTRQVYREIVAAADELGRRDDIGAVVLFGG 76
Query: 63 GRAFCAGGDVAAVVRGINEGAKFFSKEFILNY-LMATYTKPQVSILNGIVMGGGAGVSIH 121
F AG D+ + A ++ + +A KP V+ + G +G G +++
Sbjct: 77 HEIFSAGDDMPELRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALA 136
Query: 122 GRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGA 173
+RV+ +N F E GL P G L+R+ VG +G D
Sbjct: 137 ADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRV-------VGSSRAKELVFSGRFFDAE 189
Query: 174 EMRACGLATHFVPSSRLALLEEAL 197
E A GL V + + A+
Sbjct: 190 EALALGLIDDMVAPDD--VYDSAV 211
|
| >3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Length = 334 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 7e-29
Identities = 40/200 (20%), Positives = 66/200 (33%), Gaps = 23/200 (11%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR-------AFCAGGD 71
+ NRP NA + L + +V +++L G G AFC+GGD
Sbjct: 67 TVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD 126
Query: 72 VAA-------VVRGINEGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVS 119
G ++ L+ L + K + ++NG GGG +
Sbjct: 127 QRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLH 186
Query: 120 IHGRFRVA-TENSVFAMPETALGLFPDIGASYFLSRLPGF-FGEYVGLTGARLDGAEMRA 177
+ +A E + F + +G F S +L+R G F + G +M
Sbjct: 187 VVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQ 246
Query: 178 CGLATHFVPSSRLALLEEAL 197
G + L L
Sbjct: 247 MGAVNAVAEHAE--LETVGL 264
|
| >2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Length = 273 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-28
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAG 69
+ E + +T+NRP NA + + ++ +++ F R D NV +++L G+G AFC+G
Sbjct: 15 IKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSG 74
Query: 70 GDVAAVVRGINEGAKFFSKEFILNY--LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVA 127
GD G G + +L+ L+ KP ++++ G +GGG +++ +A
Sbjct: 75 GDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIA 134
Query: 128 TENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACG 179
+N++F +G F S +L+R+ VG + + E G
Sbjct: 135 ADNAIFGQTGPKVGSFDAGYGSGYLARI-------VGHKKAREIWYLCRQYNAQEALDMG 187
Query: 180 LATHFVPSSRLALLEEAL 197
L VP + + +E +
Sbjct: 188 LVNTVVPLEK--VEDETV 203
|
| >3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A 2iex_A Length = 289 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 5e-28
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAF 66
ED E+ T + +T+NRP+ NA + +++ D N+ ++IL G G +AF
Sbjct: 27 EDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAF 86
Query: 67 CAGGDVAAVVRGINEGAKFFSKEFILNYL-----MATYTKPQVSILNGIVMGGGAGVSIH 121
C+GGD VRG G K S LN L + T KP V+++ G +GGG + +
Sbjct: 87 CSGGDQK--VRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMM 144
Query: 122 GRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGA 173
+A +N++F +G F + +++R+ VG + D
Sbjct: 145 CDLTIAADNAIFGQTGPKVGSFDGGWGASYMARI-------VGQKKAREIWFLCRQYDAK 197
Query: 174 EMRACGLATHFVPSSRLALLEEAL 197
+ GL VP + L +E +
Sbjct: 198 QALDMGLVNTVVPLAD--LEKETV 219
|
| >3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Length = 287 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 2e-27
Identities = 38/213 (17%), Positives = 65/213 (30%), Gaps = 26/213 (12%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M+ + V + L+ P +N + A M+ L + DS+V++++
Sbjct: 1 MSLRNDAYSTLRVSSEHGVARIILDNP-PVNVIGATMMRELRTVLTTLADDSSVRVIVFS 59
Query: 61 GKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNYL------MATYTKPQVSILNGIVMG 113
F A D+ + S +N + + + L G G
Sbjct: 60 SADPEFFLAHVDMRIGEKMDALQELAASAPADVNVFQAVGELIRHQPQVTIVKLAGKARG 119
Query: 114 GGAGVSIHGRFRVA-TENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG-------- 164
GGA A E + E +G+ P G + +L VG
Sbjct: 120 GGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGR-------VGRNRALEVV 172
Query: 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEAL 197
LT D + G +P+ L E
Sbjct: 173 LTADLFDAETAASYGWINRALPADE--LDEYVD 203
|
| >3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Length = 305 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 5e-27
Identities = 37/220 (16%), Positives = 73/220 (33%), Gaps = 34/220 (15%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLN----ALSAQMISRLLELFQRYETDSN----- 53
+ +++EE V + ++ +N S +++ + N
Sbjct: 26 TNIGSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVL 85
Query: 54 VKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF------ILNYLMATYTKPQVSI- 106
++L F GGD+A + I EG + ++ ++ SI
Sbjct: 86 APHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHVGLGARAHSIA 145
Query: 107 -LNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG- 164
+ G +GGG ++ +A E + +PE LFP +GA F+ + +
Sbjct: 146 LVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQR-------ISA 198
Query: 165 -------LTGARLDGAEMRACGLATHFVPSSRLALLEEAL 197
L G ++ GL VP + +
Sbjct: 199 HLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQ--GVAAVE 236
|
| >3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Length = 289 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 6e-27
Identities = 42/211 (19%), Positives = 69/211 (32%), Gaps = 25/211 (11%)
Query: 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILK 60
M+ S E + V T N P +N + +++ L+ L + + +++I
Sbjct: 1 MSLTASYET-IKARLDGTVLSATFNAP-PMNLIGPEVVRDLVALLEELAHPTAPRVVIFD 58
Query: 61 GKG-RAFCAGGDVAAVV-RGINEGAKFFSKEFILNYLM---ATYTKPQVSILNGIVMGGG 115
F D+ V + L L + ++ L G G G
Sbjct: 59 SADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRARGAG 118
Query: 116 AGVSIHGRFRVA-TENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LT 166
+ + R A EN++ PE +G P GA L+RL +G LT
Sbjct: 119 SEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRL-------LGRGRALEAVLT 171
Query: 167 GARLDGAEMRACGLATHFVPSSRLALLEEAL 197
+ D G VP + L E
Sbjct: 172 SSDFDADLAERYGWVNRAVPDAE--LDEFVA 200
|
| >1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Length = 260 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 3e-26
Identities = 40/199 (20%), Positives = 73/199 (36%), Gaps = 22/199 (11%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAG 69
V + + V ++ P +N+LS + ++ L+ ++ E D + + +IL F AG
Sbjct: 7 VEPDAGAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAG 65
Query: 70 GDVAAVVRGINEGAKFFSKEFILNYL-MATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
D+ + + K +L + VS +NG GG V++ +R+
Sbjct: 66 LDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILA 125
Query: 129 ENSVFAM--PETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRAC 178
+N + + ET LG+ L +G G AE
Sbjct: 126 DNPRYCIGLNETQLGIIAPFWLKDTLENT-------IGHRAAERALQLGLLFPPAEALQV 178
Query: 179 GLATHFVPSSRLALLEEAL 197
G+ VP + + AL
Sbjct: 179 GIVDQVVPEEQ--VQSTAL 195
|
| >4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Length = 275 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 3e-26
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 26/206 (12%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG---- 63
+D + + +I +NRP + NA Q + L + F D+ + +++L G G
Sbjct: 10 DDILYYKAGGIAKI-VINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSD 68
Query: 64 --RAFCAGGDVAAVVRGINEGAKFFSKEFILNY--LMATYTKPQVSILNGIVMGGGAGVS 119
AFC+GGD + G + + +L+ L+ + K ++++ G +GGG +
Sbjct: 69 GKYAFCSGGDQSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLH 128
Query: 120 IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLD 171
+ +A +N++F +G F S +L+R+ VG +
Sbjct: 129 LVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARI-------VGQKKAREIWYLCRQYS 181
Query: 172 GAEMRACGLATHFVPSSRLALLEEAL 197
E G+ VP R L EE +
Sbjct: 182 AQEAERMGMVNTVVPVDR--LEEEGI 205
|
| >2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Length = 440 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 1e-25
Identities = 45/221 (20%), Positives = 74/221 (33%), Gaps = 44/221 (19%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG--------- 61
V E V LT+ R +LNA Q + + D V++ +L+G
Sbjct: 169 VHLERRDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYR 228
Query: 62 KGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY-----------------LMATYTKPQV 104
R F AG ++ + +G F + + KP V
Sbjct: 229 GKRVFSAGINLKYLSQGGISLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWV 288
Query: 105 SILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG 164
+ ++G +GGGA + + +A+ ++ F++P G+ P A+ L R G
Sbjct: 289 AAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPG-AANLRLGRF-------AG 340
Query: 165 --------LTGARLDGAEMRACGLATHFVPSSRLALLEEAL 197
L G R+ E A L V L
Sbjct: 341 PRVSRQVILEGRRIWAKEPEARLLVDEVVEPDE--LDAAIE 379
|
| >3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 2e-21
Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 39/214 (18%)
Query: 4 AQSQEDQVLEEETSFVR---------ILTLNRPRQLNALSAQMISRLLELFQRYETDSNV 54
++ + ++ L P +NA+S +I + Q+ +D V
Sbjct: 7 HHHHSSGLVPRGSHMAEYLRLPHSLAMIRLCNPP-VNAVSPTVIREVRNGLQKAGSDHTV 65
Query: 55 KLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF---ILNYLMATYTKPQVSILNGIV 111
K +++ G FCAG D I+ + F +++ + Y KP ++ + G+
Sbjct: 66 KAIVICGANGNFCAGAD-------IHGFSAFTPGLALGSLVDEI-QRYQKPVLAAIQGVA 117
Query: 112 MGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG------- 164
+GGG +++ +R+A + +PE LG+ P + L R+ VG
Sbjct: 118 LGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRV-------VGVPVALDL 170
Query: 165 -LTGARLDGAEMRACGLATHFVPSSRLALLEEAL 197
+G L E G+ V S +EEA+
Sbjct: 171 ITSGKYLSADEALRLGILDAVVKS---DPVEEAI 201
|
| >2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 3e-21
Identities = 58/332 (17%), Positives = 113/332 (34%), Gaps = 71/332 (21%)
Query: 3 SAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK 62
++++ V+E V ++TL P +N+LS ++ L ++ + ++VK +++ G
Sbjct: 2 DSRTKGKTVMEVGGDGVAVITLINPP-VNSLSFDVLYNLKSNYEEALSRNDVKAIVITGA 60
Query: 63 GRAFCAGGDV-----------AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIV 111
F G D+ G + KP V+ ++G+
Sbjct: 61 KGRFSGGFDISGFGEMQKGNVKEPKAGYISIDIITDL-------LEAARKPSVAAIDGLA 113
Query: 112 MGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG------- 164
+GGG +++ R++ + +PE LG+ P G + L RL VG
Sbjct: 114 LGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRL-------VGLTKALEM 166
Query: 165 -LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKD 223
LT + E + GL VP + L+ A ++ +
Sbjct: 167 ILTSKPVKAEEGHSLGLIDAVVPPAE--LVTTAR--------RWALDIVGR--------- 207
Query: 224 HSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKAS---PTSLKISL 280
S +++ A ++ A K + L L
Sbjct: 208 --------RKPWVSSVSKTDKLPPL------GEAREILTFAKAQTLKRAPNMKHPLMC-L 252
Query: 281 RSIREGRLQGVGQCLIREYRMVCHVMMGEVSK 312
+I G + G L +E + V+ + +K
Sbjct: 253 DAIEVGIVSGPRAGLEKEAEVASQVVKLDTTK 284
|
| >1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 1e-20
Identities = 54/315 (17%), Positives = 105/315 (33%), Gaps = 68/315 (21%)
Query: 21 ILTLNRPRQ-LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDV------- 72
L + + +N + ++ L + + D++VK +I+ F G D+
Sbjct: 19 ELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENF 78
Query: 73 ----AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT 128
A ++ G E K FS P V+ +NGI +GGG + + FRV
Sbjct: 79 KLPDAELIAGNLEANKIFSD-------FEDLNVPTVAAINGIALGGGLEMCLAADFRVMA 131
Query: 129 ENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARLDGAEMRACGL 180
+++ +PE LG++P G + L RL +G +G +
Sbjct: 132 DSAKIGLPEVKLGIYPGFGGTVRLPRL-------IGVDNAVEWIASGKENRAEDALKVSA 184
Query: 181 ATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240
V + + L AL +I I + +
Sbjct: 185 VDAVVTADK--LGAAAL--------DLIKRAISG--------------------ELDYKA 214
Query: 241 TVEEILSALESESTNRADAWISDAIQSLKKAS---PTSLKISLRSIREGRLQGVGQCLIR 297
+ L L+ + + A+ + +A P ++ +++I++ G + L
Sbjct: 215 KRQPKLEKLKLNAIEQMMAFETAKGFVAGQAGPNYPAPVEA-IKTIQKAANFGRDKALEV 273
Query: 298 EYRMVCHVMMGEVSK 312
E + S
Sbjct: 274 EAAGFAKLAKTSASN 288
|
| >2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556 | Back alignment and structure |
|---|
Score = 88.9 bits (220), Expect = 2e-19
Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 35/207 (16%)
Query: 19 VRILTLNRPRQ----------LNALSAQMISRLLELFQRYETDSN-VKLLILKGKG-RAF 66
V L ++ LN+ + L + QR + V+ ++L R F
Sbjct: 31 VATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVF 90
Query: 67 CAGGDVAAVVR----GINEGAKFFSKEF-ILNYLMATYTKPQVSILNGIVMGGGAGVSI- 120
C+G ++ + KF ++ L ++ +NG GGG +++
Sbjct: 91 CSGANIFMLGLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALA 150
Query: 121 -HGRFRVATENSVFAMPE-TALGLFPDIGASYFLSRLPGFFGEYVG--------LTGARL 170
+ V +S ++PE LG+ P G L+R+ V +
Sbjct: 151 CDEIYLVDDRSSSVSLPEVPLLGVLPGTGG---LTRVTDKRK--VRHDRADIFCTVVEGV 205
Query: 171 DGAEMRACGLATHFVPSSRLALLEEAL 197
G +A L V ++ +
Sbjct: 206 RGERAKAWRLVDEVVKPNQ--FDQAIQ 230
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 6e-08
Identities = 70/400 (17%), Positives = 122/400 (30%), Gaps = 136/400 (34%)
Query: 10 QVLEEETSFVRIL----TLNRPRQLNALSAQMISRLLELFQRYETDSNVKLL--ILKGKG 63
V E+ +FV + P+ + LS + I ++ S L L K
Sbjct: 23 SVFED--AFVDNFDCKDVQDMPK--SILSKEEIDHIIMSKDA---VSGTLRLFWTLLSKQ 75
Query: 64 RAFCAGGDVAAVVRGINEGAKFFSKEFI-LNY--LMATY-TKPQVSILNGIVMGGGAGVS 119
E + F +E + +NY LM+ T+ + + +
Sbjct: 76 ----------------EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY------- 112
Query: 120 IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFF-----------GEYVGLTGA 168
I R R+ +N VFA Y +SRL + + V + G
Sbjct: 113 IEQRDRLYNDNQVFA--------------KYNVSRLQPYLKLRQALLELRPAKNVLIDG- 157
Query: 169 RLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYH 228
+ G + +AL + V K + +
Sbjct: 158 ------VLGSG-------KTWVAL--DVC-----LS----YKVQCKMDFKIF-------- 185
Query: 229 WMDVIDKCFSRRTVEEILSAL----ESESTNRADAWISDAIQSLKKASPTSLKISLRS-I 283
W+++ C S TV E+L L + T+R+D S I K S++ LR +
Sbjct: 186 WLNLK-NCNSPETVLEMLQKLLYQIDPNWTSRSD--HSSNI----KLRIHSIQAELRRLL 238
Query: 284 REGRLQGVGQCLI--REYRMVCHVMMGEVSKDFFEGCRAILLDKDKN-------PKWKPS 334
+ + CL+ V + + F C+ +L + K
Sbjct: 239 KSKPYE---NCLLVLLN---VQNA---KAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289
Query: 335 KLELVNDNMVD----QYFSKINDDRWEDIKLP--ARSNLP 368
L+ + + K D R +D LP + P
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQD--LPREVLTTNP 327
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 375 | |||
| 4hdt_A | 353 | 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti | 100.0 | |
| 3bpt_A | 363 | 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet | 100.0 | |
| 3ju1_A | 407 | Enoyl-COA hydratase/isomerase family protein; alph | 100.0 | |
| 3hrx_A | 254 | Probable enoyl-COA hydratase; the spiral fold, the | 100.0 | |
| 4fzw_C | 274 | 1,2-epoxyphenylacetyl-COA isomerase; structural ge | 100.0 | |
| 4fzw_A | 258 | 2,3-dehydroadipyl-COA hydratase; structural genomi | 100.0 | |
| 3kqf_A | 265 | Enoyl-COA hydratase/isomerase family protein; IDP0 | 100.0 | |
| 3gow_A | 254 | PAAG, probable enoyl-COA hydratase; the spiral fol | 100.0 | |
| 3g64_A | 279 | Putative enoyl-COA hydratase; alpha-beta structure | 100.0 | |
| 3pea_A | 261 | Enoyl-COA hydratase/isomerase family protein; stru | 100.0 | |
| 3i47_A | 268 | Enoyl COA hydratase/isomerase (crotonase); structu | 100.0 | |
| 3h81_A | 278 | Enoyl-COA hydratase ECHA8; niaid, decode, infectio | 100.0 | |
| 3p5m_A | 255 | Enoyl-COA hydratase/isomerase; seattle structural | 100.0 | |
| 3sll_A | 290 | Probable enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 3moy_A | 263 | Probable enoyl-COA hydratase; ssgcid, seattle stru | 100.0 | |
| 1nzy_A | 269 | Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen | 100.0 | |
| 3fdu_A | 266 | Putative enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 3hin_A | 275 | Putative 3-hydroxybutyryl-COA dehydratase; structu | 100.0 | |
| 2ppy_A | 265 | Enoyl-COA hydratase; beta-oxidation, fatty acid me | 100.0 | |
| 2ej5_A | 257 | Enoyl-COA hydratase subunit II; structural genomic | 100.0 | |
| 3qre_A | 298 | Enoyl-COA hydratase, ECHA12_1; structural genomics | 100.0 | |
| 3myb_A | 286 | Enoyl-COA hydratase; ssgcid, struct genomics, seat | 100.0 | |
| 2pbp_A | 258 | Enoyl-COA hydratase subunit I; B-oxidation, struct | 100.0 | |
| 3swx_A | 265 | Probable enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 3rsi_A | 265 | Putative enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 3qxz_A | 265 | Enoyl-COA hydratase/isomerase; structural genomics | 100.0 | |
| 2j5i_A | 276 | P-hydroxycinnamoyl COA hydratase/lyase; vanillin, | 100.0 | |
| 3lke_A | 263 | Enoyl-COA hydratase; nysgrc, target 112 structural | 100.0 | |
| 3tlf_A | 274 | Enoyl-COA hydratase/isomerase; structural genomics | 100.0 | |
| 4f47_A | 278 | Enoyl-COA hydratase ECHA19; ssgcid, seattle struct | 100.0 | |
| 2vx2_A | 287 | Enoyl-COA hydratase domain-containing protein 3; i | 100.0 | |
| 3qk8_A | 272 | Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB | 100.0 | |
| 3trr_A | 256 | Probable enoyl-COA hydratase/isomerase; ssgcid, st | 100.0 | |
| 1dci_A | 275 | Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg | 100.0 | |
| 3r9t_A | 267 | ECHA1_1; ssgcid, seattle structural genomics cente | 100.0 | |
| 3r9q_A | 262 | Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome | 100.0 | |
| 3hp0_A | 267 | Putative polyketide biosynthesis enoyl-COA hydrata | 100.0 | |
| 2fbm_A | 291 | Y chromosome chromodomain protein 1, telomeric IS; | 100.0 | |
| 1ef8_A | 261 | Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc | 100.0 | |
| 3qxi_A | 265 | Enoyl-COA hydratase ECHA1; structural genomics, se | 100.0 | |
| 3gkb_A | 287 | Putative enoyl-COA hydratase; structural genomics, | 100.0 | |
| 1mj3_A | 260 | Enoyl-COA hydratase, mitochondrial; homohexamer, l | 100.0 | |
| 1uiy_A | 253 | Enoyl-COA hydratase; lyase, beta-oxidation, croton | 100.0 | |
| 1wz8_A | 264 | Enoyl-COA hydratase; lyase, crotonase, hexamer, st | 100.0 | |
| 2gtr_A | 261 | CDY-like, chromodomain Y-like protein; structural | 100.0 | |
| 4eml_A | 275 | Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe | 100.0 | |
| 3oc7_A | 267 | Enoyl-COA hydratase; seattle structural genomics c | 100.0 | |
| 3qmj_A | 256 | Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, | 100.0 | |
| 3t89_A | 289 | 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase | 100.0 | |
| 1hzd_A | 272 | AUH, AU-binding protein/enoyl-COA hydratase; RNA-b | 100.0 | |
| 2uzf_A | 273 | Naphthoate synthase; lyase, menaquinone biosynthes | 100.0 | |
| 3rrv_A | 276 | Enoyl-COA hydratase/isomerase; structural genomics | 100.0 | |
| 3lao_A | 258 | Enoyl-COA hydratase/isomerase; alpha-beta sandwich | 100.0 | |
| 3pe8_A | 256 | Enoyl-COA hydratase; emerald biostructures, struct | 100.0 | |
| 3t8b_A | 334 | 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase | 100.0 | |
| 3he2_A | 264 | Enoyl-COA hydratase ECHA6; fatty acid metabolism, | 100.0 | |
| 2f6q_A | 280 | Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis | 100.0 | |
| 4di1_A | 277 | Enoyl-COA hydratase ECHA17; structural genomics, s | 100.0 | |
| 3isa_A | 254 | Putative enoyl-COA hydratase/isomerase; structural | 100.0 | |
| 2a7k_A | 250 | CARB; crotonase, antibiotic, beta-lactam, biosynth | 100.0 | |
| 3l3s_A | 263 | Enoyl-COA hydratase/isomerase family protein; crot | 100.0 | |
| 1sg4_A | 260 | 3,2-trans-enoyl-COA isomerase, mitochondrial; crot | 100.0 | |
| 3h0u_A | 289 | Putative enoyl-COA hydratase; structural genomics, | 100.0 | |
| 2q35_A | 243 | CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} | 100.0 | |
| 1pjh_A | 280 | Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral | 100.0 | |
| 2j5g_A | 263 | ALR4455 protein; enzyme evolution, C-C bond hydrol | 100.0 | |
| 3njd_A | 333 | Enoyl-COA hydratase; ssgcid, mycobacerium smegmati | 100.0 | |
| 3r6h_A | 233 | Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m | 100.0 | |
| 3ot6_A | 232 | Enoyl-COA hydratase/isomerase family protein; stru | 100.0 | |
| 3m6n_A | 305 | RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X | 100.0 | |
| 3t3w_A | 279 | Enoyl-COA hydratase; ssgcid, structural genomics, | 100.0 | |
| 1szo_A | 257 | 6-oxocamphor hydrolase; enzyme-product complex; HE | 100.0 | |
| 2np9_A | 440 | DPGC; protein inhibitor complex, oxidoreductase; H | 100.0 | |
| 3zwc_A | 742 | Peroxisomal bifunctional enzyme; beta oxidation pa | 100.0 | |
| 2wtb_A | 725 | MFP2, fatty acid multifunctional protein (ATMFP2); | 100.0 | |
| 1wdk_A | 715 | Fatty oxidation complex alpha subunit; alpha2BETA2 | 100.0 | |
| 2w3p_A | 556 | Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri | 100.0 | |
| 3bf0_A | 593 | Protease 4; bacterial, hydrolase, inner membrane, | 99.85 | |
| 3rst_A | 240 | Signal peptide peptidase SPPA; alpha/beta protein | 99.82 | |
| 3viv_A | 230 | 441AA long hypothetical NFED protein; protein-pept | 99.79 | |
| 2f9y_B | 304 | Acetyl-coenzyme A carboxylase carboxyl transferas | 99.59 | |
| 1y7o_A | 218 | ATP-dependent CLP protease proteolytic subunit; hy | 99.58 | |
| 2f9i_A | 327 | Acetyl-coenzyme A carboxylase carboxyl transferase | 99.52 | |
| 2f9y_A | 339 | Acetyl-COA carboxylase, carboxyltransferase alpha; | 99.49 | |
| 2cby_A | 208 | ATP-dependent CLP protease proteolytic subunit 1; | 98.97 | |
| 2w3p_A | 556 | Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri | 98.67 | |
| 3qwd_A | 203 | ATP-dependent CLP protease proteolytic subunit; ca | 98.61 | |
| 1yg6_A | 193 | ATP-dependent CLP protease proteolytic subunit; en | 98.6 | |
| 2f6i_A | 215 | ATP-dependent CLP protease, putative; structural g | 98.56 | |
| 3p2l_A | 201 | ATP-dependent CLP protease proteolytic subunit; st | 98.43 | |
| 1tg6_A | 277 | Putative ATP-dependent CLP protease proteolytic S; | 98.42 | |
| 4gm2_A | 205 | ATP-dependent CLP protease proteolytic subunit; st | 98.04 | |
| 3bf0_A | 593 | Protease 4; bacterial, hydrolase, inner membrane, | 97.9 | |
| 1pix_A | 587 | Glutaconyl-COA decarboxylase A subunit; biotin-dep | 97.89 | |
| 2f9i_B | 285 | Acetyl-coenzyme A carboxylase carboxyl transferase | 97.81 | |
| 3iav_A | 530 | Propionyl-COA carboxylase complex B subunit; accas | 97.81 | |
| 3n6r_B | 531 | Propionyl-COA carboxylase, beta subunit; protein c | 97.54 | |
| 1on3_A | 523 | Methylmalonyl-COA carboxyltransferase 12S subunit; | 97.46 | |
| 2bzr_A | 548 | Propionyl-COA carboxylase beta chain 5; fatty acid | 97.39 | |
| 3u9r_B | 555 | MCC beta, methylcrotonyl-COA carboxylase, beta-sub | 97.33 | |
| 1x0u_A | 522 | Hypothetical methylmalonyl-COA decarboxylase ALPH; | 97.31 | |
| 1x0u_A | 522 | Hypothetical methylmalonyl-COA decarboxylase ALPH; | 97.06 | |
| 1vrg_A | 527 | Propionyl-COA carboxylase, beta subunit; TM0716, s | 96.91 | |
| 1vrg_A | 527 | Propionyl-COA carboxylase, beta subunit; TM0716, s | 96.8 | |
| 3gf3_A | 588 | Glutaconyl-COA decarboxylase subunit A; sodium ION | 96.68 | |
| 2bzr_A | 548 | Propionyl-COA carboxylase beta chain 5; fatty acid | 96.66 | |
| 1on3_A | 523 | Methylmalonyl-COA carboxyltransferase 12S subunit; | 96.63 | |
| 3iav_A | 530 | Propionyl-COA carboxylase complex B subunit; accas | 96.2 | |
| 3n6r_B | 531 | Propionyl-COA carboxylase, beta subunit; protein c | 96.09 | |
| 1pix_A | 587 | Glutaconyl-COA decarboxylase A subunit; biotin-dep | 95.9 | |
| 3u9r_B | 555 | MCC beta, methylcrotonyl-COA carboxylase, beta-sub | 95.04 | |
| 3gf3_A | 588 | Glutaconyl-COA decarboxylase subunit A; sodium ION | 93.19 | |
| 2x24_A | 793 | Acetyl-COA carboxylase; fatty acid biosynthesis, l | 92.4 | |
| 3k8x_A | 758 | Acetyl-COA carboxylase; transferase, carboxyltrans | 91.83 | |
| 3k8x_A | 758 | Acetyl-COA carboxylase; transferase, carboxyltrans | 85.66 | |
| 2x24_A | 793 | Acetyl-COA carboxylase; fatty acid biosynthesis, l | 84.39 |
| >4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-72 Score=543.85 Aligned_cols=339 Identities=35% Similarity=0.670 Sum_probs=298.1
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh---
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG--- 82 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~--- 82 (375)
.++.|.++++|+|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++.......
T Consensus 7 ~~e~vl~e~~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 86 (353)
T 4hdt_A 7 KNEDVLVNVEGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAE 86 (353)
T ss_dssp -CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHH
T ss_pred CCCcEEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHH
Confidence 356899999999999999999999999999999999999999999999999999999 8999999999986543211
Q ss_pred -hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHH
Q 017189 83 -AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGE 161 (375)
Q Consensus 83 -~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~ 161 (375)
..++...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.+++
T Consensus 87 ~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g~~a~ 166 (353)
T 4hdt_A 87 ARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPGKLGL 166 (353)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSSTTHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhhHHHH
Confidence 4566777889999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|+|||++|+|+||+++||||+|||+++|++...++.+ +.+...+..|.... ....+......|++||+.++
T Consensus 167 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~------~~~~~~l~~~~~~~--~~~~l~~~~~~i~~~f~~~~ 238 (353)
T 4hdt_A 167 HAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIA------DGVDAALAAHAQEP--PASPLAEQRSWIDECYTGDT 238 (353)
T ss_dssp HHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHH------HCHHHHHHHHCBCC--CCCHHHHTHHHHHHHTTCSS
T ss_pred HHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHH------hchhHHHHHhcccC--CccchHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999776666632 11334455554432 34456678899999999999
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcC-CHHHHHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQ-GVGQCLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~-~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+++|+++|+.. ..+|+.++++.|+++||.+++++|++++++... +++++++.|.+++.+++.++ ||+|||+|
T Consensus 239 ~~~i~~~L~~~----~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~---D~~EGvrA 311 (353)
T 4hdt_A 239 VADIIAALRAH----DAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSH---DLVEGIRA 311 (353)
T ss_dssp HHHHHHHHHHH----CSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCH---HHHHHHHH
T ss_pred HHHHHHHHHhc----ccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCc---hHHHHHhh
Confidence 99999999885 468999999999999999999999999988764 89999999999999999754 99999999
Q ss_pred hhccCCCCCCCCCCCccCCCHHHHHhcccCCCCCCccccccCCC
Q 017189 321 ILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLPAR 364 (375)
Q Consensus 321 ~l~ek~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~~~~~~ 364 (375)
||++|+|+|+|+|+++++|++++|+.||+|+.+ |+.|..+
T Consensus 312 fl~dekR~P~w~p~~l~~V~~~~v~~~f~p~~~----el~~~~~ 351 (353)
T 4hdt_A 312 QLVDKDRNPKWRPATLAEVTEADVEAYFAPVDP----ELTFEGE 351 (353)
T ss_dssp HHC----CCCCSSCSGGGCCHHHHHGGGCCCSS----CCCCCCC
T ss_pred hhhCcCCCCCCCCCChhhCCHHHHHHHcCCCCC----CCCCCCc
Confidence 976666999999999999999999999999974 6766554
|
| >3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-68 Score=523.40 Aligned_cols=349 Identities=42% Similarity=0.760 Sum_probs=311.7
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccc--h--h
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN--E--G 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~--~--~ 82 (375)
.+.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|+++|+|||||+| ++||+|+|++++..... . .
T Consensus 5 ~~~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~~ 84 (363)
T 3bpt_A 5 AEEVLLGKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKIA 84 (363)
T ss_dssp CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCCH
T ss_pred CcceEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHHH
Confidence 34699999999999999999999999999999999999999999999999999998 99999999998854311 1 1
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEY 162 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~ 162 (375)
..++...+.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.++++
T Consensus 85 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~~a~~ 164 (363)
T 3bpt_A 85 PVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYF 164 (363)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTTHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHHHHHH
Confidence 23445556788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCC---CCcchhhhHHHHHHHHhCc
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPY---LKDHSAYHWMDVIDKCFSR 239 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~f~~ 239 (375)
|++||++|+|+||+++||||+|||++++....+++.++...++..++.+++.|..... +....+......|++||+.
T Consensus 165 l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~f~~ 244 (363)
T 3bpt_A 165 LALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSA 244 (363)
T ss_dssp HHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHHHTTS
T ss_pred HHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHHHhCC
Confidence 9999999999999999999999999998766677777777788888888888864322 2234556778999999999
Q ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 240 RTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 240 ~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+++.+|+++|+.+ ..+|+.+++++|+++||.+++.+|++++++...++.++++.|...+..++.++ |++|||+
T Consensus 245 ~~~~ei~~al~~~----~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~---D~~EGv~ 317 (363)
T 3bpt_A 245 NTVEEIIENLQQD----GSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGH---DFHEGVR 317 (363)
T ss_dssp SSHHHHHHHHHHH----CCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSS---HHHHHHH
T ss_pred CCHHHHHHHHhcc----ChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCc---cHHhhhh
Confidence 9999999999885 46899999999999999999999999999988999999999999999999755 9999999
Q ss_pred hhhccCCCCCCCCCCCccCCCHHHHHhcccCCCCCCccccccCCCCC
Q 017189 320 AILLDKDKNPKWKPSKLELVNDNMVDQYFSKINDDRWEDIKLPARSN 366 (375)
Q Consensus 320 A~l~ek~r~P~w~~~~~~~v~~~~v~~~f~~~~~~~~~~~~~~~~~~ 366 (375)
||++||+|+|+|+++++++|++++|+++|+|+++ .++.++.+++
T Consensus 318 Afl~eK~r~P~~~~~~~~~v~~~~v~~~f~~~~~---~~l~~~~~~~ 361 (363)
T 3bpt_A 318 AVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGS---SDLKFAENLY 361 (363)
T ss_dssp HHTTSCCCCCCCSSCSGGGSCHHHHHHHHSCCGG---GSCCSSCGGG
T ss_pred heeeCCCCCCCCCCCChhhCCHHHHHHHhcCCCc---ccccchHhhc
Confidence 9965887899999999999999999999999843 5888888763
|
| >3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-68 Score=525.09 Aligned_cols=338 Identities=33% Similarity=0.590 Sum_probs=300.4
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccc------
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGIN------ 80 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~------ 80 (375)
++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|+++|+|||||+| ++||+|+|++++.....
T Consensus 41 ~~~v~~~~~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~ 120 (407)
T 3ju1_A 41 FQTLATASGKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQV 120 (407)
T ss_dssp EEEEECTTSCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSC
T ss_pred cceEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhccccccccc
Confidence 45678888999999999999999999999999999999999999999999999999 89999999999865321
Q ss_pred -h-hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchH
Q 017189 81 -E-GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGF 158 (375)
Q Consensus 81 -~-~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~ 158 (375)
. ...++...+.++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.
T Consensus 121 ~~~~~~~~~~~~~l~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g~ 200 (407)
T 3ju1_A 121 TEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPGK 200 (407)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhHH
Confidence 1 14455666788999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCC-h----HHHHHHHHHhccC--CCCCcchhhhHHH
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSD-P----AVISAVIDKFSLE--PYLKDHSAYHWMD 231 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~-~----~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (375)
++++|++||++|+|+||+++||||+|||++++..+.++|.++.+.+ + +.+...+++|... .......+..+..
T Consensus 201 ~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~~~ 280 (407)
T 3ju1_A 201 MGLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQE 280 (407)
T ss_dssp HHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHTHH
T ss_pred HHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHHHH
Confidence 8999999999999999999999999999999988777887765543 1 1244555555332 2234556678899
Q ss_pred HHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCc
Q 017189 232 VIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVS 311 (375)
Q Consensus 232 ~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s 311 (375)
.|++||+ +++++|+++|+...+ .++|+++++++|+++||.+++++|++++++...++.++++.|.+.+..++.++
T Consensus 281 ~I~~~f~-~sv~~i~~~L~~~~~--~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s~-- 355 (407)
T 3ju1_A 281 MIDRLMA-GSLTDIVTRMSTLST--DEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAKG-- 355 (407)
T ss_dssp HHHHHTC-SCHHHHHHHHHHCCC--SCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHhc-CCHHHHHHHHHhccc--ccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCH--
Confidence 9999999 999999999987432 47999999999999999999999999999999999999999999999999765
Q ss_pred chHHhhHhhhhccCCCCCCCCCCCccCCCHHHHHhcccCC
Q 017189 312 KDFFEGCRAILLDKDKNPKWKPSKLELVNDNMVDQYFSKI 351 (375)
Q Consensus 312 ~d~~egv~A~l~ek~r~P~w~~~~~~~v~~~~v~~~f~~~ 351 (375)
||+|||+|||+||+|+|+|+++++++|++++|+++|+|.
T Consensus 356 -D~~EGvrAflidKdr~P~w~~~~l~~V~~~~v~~~f~~~ 394 (407)
T 3ju1_A 356 -DFCEGVRALLIDKDKQPKWQFADVQSVPNSVIEDILTSP 394 (407)
T ss_dssp -SHHHHHHHHTTSCCCCCCCSSSSTTTSCHHHHHHHHSCC
T ss_pred -HHHHHHHHHHhcCCcCCCCCCCChHhCCHHHHHHHhCCC
Confidence 999999999779989999999999999999999999874
|
| >3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-62 Score=455.29 Aligned_cols=252 Identities=29% Similarity=0.431 Sum_probs=233.5
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF 90 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 90 (375)
|.+|++|+|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||+|++||+|+|++++.........+...++
T Consensus 2 vl~E~~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 81 (254)
T 3hrx_A 2 VLKERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPDYEAHLRRYN 81 (254)
T ss_dssp EEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCCHHHHTHHHH
T ss_pred eEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchhhHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999998655443355566778
Q ss_pred HHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCc
Q 017189 91 ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGAR 169 (375)
Q Consensus 91 ~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~ 169 (375)
.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++||++
T Consensus 82 ~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~llltg~~ 161 (254)
T 3hrx_A 82 RVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPR 161 (254)
T ss_dssp HHHHHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHHCCC
T ss_pred HHHHHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhhcCcc
Confidence 8899999999999999999999999999999999999999999999999999999999999999999 679999999999
Q ss_pred cCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHH
Q 017189 170 LDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSAL 249 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L 249 (375)
|+|+||+++||||+|||++++.. ++.
T Consensus 162 i~A~eA~~~GLv~~vv~~~~l~~--~a~---------------------------------------------------- 187 (254)
T 3hrx_A 162 LSAEEALALGLVHRVVPAEKLME--EAL---------------------------------------------------- 187 (254)
T ss_dssp EEHHHHHHHTSCSEEECGGGHHH--HHH----------------------------------------------------
T ss_pred cCHHHHHHCCCeEEecCcHHHHH--HHH----------------------------------------------------
Confidence 99999999999999999998843 322
Q ss_pred hhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCCCC
Q 017189 250 ESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNP 329 (375)
Q Consensus 250 ~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~P 329 (375)
+.+++|+..||.+++.+|+++++....+++++++.|...+..++.+ +|++||++|| +|| |+|
T Consensus 188 -------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s---~d~~Eg~~AF-~eK-R~P 249 (254)
T 3hrx_A 188 -------------SLAKELAQGPTRAYALTKKLLLETYRLSLTEALALEAVLQGQAGQT---QDHEEGVRAF-REK-RPP 249 (254)
T ss_dssp -------------HHHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTS---HHHHHHHHHH-HTT-SCC
T ss_pred -------------HHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-hCC-CCC
Confidence 2378999999999999999999999999999999999999999965 5999999999 599 899
Q ss_pred CCCCC
Q 017189 330 KWKPS 334 (375)
Q Consensus 330 ~w~~~ 334 (375)
+|+++
T Consensus 250 ~f~Gr 254 (254)
T 3hrx_A 250 RFQGR 254 (254)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99985
|
| >4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-61 Score=453.19 Aligned_cols=256 Identities=26% Similarity=0.381 Sum_probs=226.6
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh----
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---- 82 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---- 82 (375)
+++.|.++.++||++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||+|++||+|+|++++.......
T Consensus 13 M~e~il~~~~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~ 92 (274)
T 4fzw_C 13 MMEFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDL 92 (274)
T ss_dssp ---CEEEEEETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCH
T ss_pred ccccEEEEEECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHH
Confidence 4678999999999999999999999999999999999999999999999999999999999999999875433211
Q ss_pred -hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 83 -AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 83 -~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
..+.+.++.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++
T Consensus 93 ~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 172 (274)
T 4fzw_C 93 GMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARA 172 (274)
T ss_dssp HHHHHHTHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHH
Confidence 334445667888999999999999999999999999999999999999999999999999999999999999999 679
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
++|++||+.|+|+||+++||||+|||++++.. .+.
T Consensus 173 ~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------- 207 (274)
T 4fzw_C 173 MGLALLGNQLSAEQAHEWGMIWQVVDDETLAD--TAQ------------------------------------------- 207 (274)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHH--HHH-------------------------------------------
T ss_pred HHHHHhCCcCCHHHHHHCCCceEEeChHHHHH--HHH-------------------------------------------
Confidence 99999999999999999999999999998843 222
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+++++|+..||.+++.+|++++.....+++++++.|...+..++.+ +|++||++|
T Consensus 208 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~Egv~A 262 (274)
T 4fzw_C 208 ----------------------QLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAGRS---ADYREGVSA 262 (274)
T ss_dssp ----------------------HHHHHHTTSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTS---HHHHHHHHH
T ss_pred ----------------------HHHHHHHcCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcC---HHHHHHHHH
Confidence 2378999999999999999999999999999999999999998865 599999999
Q ss_pred hhccCCCCCCCCCC
Q 017189 321 ILLDKDKNPKWKPS 334 (375)
Q Consensus 321 ~l~ek~r~P~w~~~ 334 (375)
| +|| |+|+|+++
T Consensus 263 F-~eK-R~P~f~Gr 274 (274)
T 4fzw_C 263 F-LAK-RSPQFTGK 274 (274)
T ss_dssp H-HC--CCCCCCCC
T ss_pred H-hCC-CCCCCCCC
Confidence 9 599 89999975
|
| >4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-61 Score=450.65 Aligned_cols=254 Identities=25% Similarity=0.409 Sum_probs=231.5
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFS 87 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 87 (375)
|..|.++++|+|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ..+..
T Consensus 4 ms~l~ve~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~-~~~~~ 82 (258)
T 4fzw_A 4 MSELIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLA-ATLND 82 (258)
T ss_dssp -CEEEEEEETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHH-HHHTC
T ss_pred CCcEEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhh-hHHHh
Confidence 45799999999999999999999999999999999999999999999999999999999999999998654322 22333
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
....++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++|
T Consensus 83 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~lllt 162 (258)
T 4fzw_A 83 TRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLS 162 (258)
T ss_dssp SHHHHHHHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHHHc
Confidence 4457788899999999999999999999999999999999999999999999999999999999999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||+|||++++.. .+.
T Consensus 163 g~~i~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------- 191 (258)
T 4fzw_A 163 GESITAQQAQQAGLVSDVFPSDLTLE--YAL------------------------------------------------- 191 (258)
T ss_dssp CCCEEHHHHHHHTSCSEEECTTTHHH--HHH-------------------------------------------------
T ss_pred CCcCcHHHHHHCCCeeEEeCchHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999998743 322
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+++++|++.||.+++.+|+++++....+++++++.|.+.+..++.+ +|++||++|| +||
T Consensus 192 ----------------~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~Eg~~AF-~eK- 250 (258)
T 4fzw_A 192 ----------------QLASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLAAT---EDRHEGISAF-LQK- 250 (258)
T ss_dssp ----------------HHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTS---HHHHHHHHHH-HTT-
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHH-hCC-
Confidence 2378999999999999999999999999999999999999999975 4999999999 599
Q ss_pred CCCCCCCC
Q 017189 327 KNPKWKPS 334 (375)
Q Consensus 327 r~P~w~~~ 334 (375)
|+|+|+++
T Consensus 251 R~P~f~Gr 258 (258)
T 4fzw_A 251 RTPDFKGR 258 (258)
T ss_dssp SCCCCCCC
T ss_pred CCCCCCCC
Confidence 89999985
|
| >3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-58 Score=434.89 Aligned_cols=257 Identities=27% Similarity=0.437 Sum_probs=234.3
Q ss_pred CCCCcEEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-
Q 017189 6 SQEDQVLEE-ETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG- 82 (375)
Q Consensus 6 ~~~~~v~~~-~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~- 82 (375)
++++.|.++ .+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.......
T Consensus 5 m~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~ 84 (265)
T 3kqf_A 5 LQLQNISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMNEEQV 84 (265)
T ss_dssp --CCSEEEECCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCCHHHH
T ss_pred ccCCeEEEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccCHHHH
Confidence 357789999 8999999999999999999999999999999999999999999999999 9999999999986543222
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
..+....+.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+++
T Consensus 85 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ 164 (265)
T 3kqf_A 85 RHAVSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRAK 164 (265)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHHHHH
Confidence 445666778899999999999999999999999999999999999999999999999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 165 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~-------------------------------------------- 198 (265)
T 3kqf_A 165 ELIYTGRRISAQEAKEYGLVEFVVPVHLLEE--KAI-------------------------------------------- 198 (265)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEECGGGHHH--HHH--------------------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEeCHHHHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999988743 222
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.+++|+..||.+++.+|+++++....++.++++.|...+..++.+ +|++||++||
T Consensus 199 ---------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~eg~~af 254 (265)
T 3kqf_A 199 ---------------------EIAEKIASNGPIAVRLAKEAISNGIQVDLHTGLQMEKQAYEGVIHT---KDRLEGLQAF 254 (265)
T ss_dssp ---------------------HHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTC---HHHHHHHHHH
T ss_pred ---------------------HHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH
Confidence 2378999999999999999999999999999999999999999965 4999999999
Q ss_pred hccCCCCCCCCCC
Q 017189 322 LLDKDKNPKWKPS 334 (375)
Q Consensus 322 l~ek~r~P~w~~~ 334 (375)
+ +| |+|+|+++
T Consensus 255 ~-ek-r~p~f~g~ 265 (265)
T 3kqf_A 255 K-EK-RTPMYKGE 265 (265)
T ss_dssp H-TT-SCCCCCCC
T ss_pred H-cC-CCCCCCCC
Confidence 4 99 89999864
|
| >3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-58 Score=433.44 Aligned_cols=257 Identities=25% Similarity=0.360 Sum_probs=234.4
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh---
Q 017189 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--- 82 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--- 82 (375)
.+++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 14 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 93 (279)
T 3g64_A 14 PEWRHLRVEITDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTA 93 (279)
T ss_dssp SCCSSEEEEEETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHH
T ss_pred CCCCeEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhh
Confidence 34778999999999999999999999999999999999999999999999999999999999999999986543221
Q ss_pred --hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCC-CCccHHHHHhhcch-H
Q 017189 83 --AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLF-PDIGASYFLSRLPG-F 158 (375)
Q Consensus 83 --~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~-p~~g~~~~l~rl~g-~ 158 (375)
..+...++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |++|++++|+|++| .
T Consensus 94 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~ 173 (279)
T 3g64_A 94 RLLDFNRMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLG 173 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHH
Confidence 2344556788899999999999999999999999999999999999999999999999999 99999999999999 6
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
++++|++||+.++|+||+++||||+|||++++.....
T Consensus 174 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~------------------------------------------- 210 (279)
T 3g64_A 174 HATRLLMLGDTVRAPEAERIGLISELTEEGRADEAAR------------------------------------------- 210 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHH-------------------------------------------
T ss_pred HHHHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHH-------------------------------------------
Confidence 7999999999999999999999999999998743222
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhH
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGC 318 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv 318 (375)
+++++|++.||.+++.+|++++.....+++++++.|...+..++.+ +|++||+
T Consensus 211 ------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s---~d~~eg~ 263 (279)
T 3g64_A 211 ------------------------TLARRLADGPALAHAQTKALLTAELDMPLAAAVELDASTQALLMTG---EDYAEFH 263 (279)
T ss_dssp ------------------------HHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTS---HHHHHHH
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcC---HHHHHHH
Confidence 2378999999999999999999998899999999999999999965 5999999
Q ss_pred hhhhccCCCCCCCCCC
Q 017189 319 RAILLDKDKNPKWKPS 334 (375)
Q Consensus 319 ~A~l~ek~r~P~w~~~ 334 (375)
+|| ++| |+|+|+++
T Consensus 264 ~af-~ek-r~p~f~g~ 277 (279)
T 3g64_A 264 AAF-TEK-RPPKWQGR 277 (279)
T ss_dssp HHH-HTT-SCCCCCCC
T ss_pred HHH-hcC-CCCCCCCC
Confidence 999 499 89999975
|
| >3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-58 Score=430.29 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=231.2
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--hH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--AK 84 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--~~ 84 (375)
+++.|.++++++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..
T Consensus 4 m~~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (261)
T 3pea_A 4 MLKFLSVRVEDHIAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATE 82 (261)
T ss_dssp CCSSEEEEEETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHH
T ss_pred cccceEEEEECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHH
Confidence 46789999999999999999999 9999999999999999999999999999999999999999999986543321 23
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+....+.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|
T Consensus 83 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l 162 (261)
T 3pea_A 83 LAQLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEM 162 (261)
T ss_dssp HHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 4444556888999999999999999999999999999999999999999999999999999999999999999 679999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
++||+.++|+||+++||||+|||++++.. +++
T Consensus 163 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~---------------------------------------------- 194 (261)
T 3pea_A 163 MLTSTPITGAEALKWGLVNGVFAEETFLD--DTL---------------------------------------------- 194 (261)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECGGGHHH--HHH----------------------------------------------
T ss_pred HHcCCCCCHHHHHHCCCccEecCHHHHHH--HHH----------------------------------------------
Confidence 99999999999999999999999988743 322
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhc
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILL 323 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ 323 (375)
+.+++|+..||.+++.+|++++.....+++++++.|...+..++.++ |++||++|| +
T Consensus 195 -------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~---d~~eg~~af-~ 251 (261)
T 3pea_A 195 -------------------KVAKQIAGKSPATARAVLELLQTTKSSHYYEGVQREAQIFGEVFTSE---DGREGVAAF-L 251 (261)
T ss_dssp -------------------HHHHHHHTSCHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSH---HHHHHHHHH-H
T ss_pred -------------------HHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHH-H
Confidence 23789999999999999999999888889999999999999999765 999999999 5
Q ss_pred cCCCCCCCCCC
Q 017189 324 DKDKNPKWKPS 334 (375)
Q Consensus 324 ek~r~P~w~~~ 334 (375)
+| |+|+|+++
T Consensus 252 ek-r~P~f~g~ 261 (261)
T 3pea_A 252 EK-RKPSFSGR 261 (261)
T ss_dssp TT-SCCCCCC-
T ss_pred cC-CCCCCCCC
Confidence 99 89999863
|
| >3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-58 Score=431.12 Aligned_cols=257 Identities=23% Similarity=0.346 Sum_probs=228.7
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh----
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---- 82 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---- 82 (375)
+++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 2 ~~~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (268)
T 3i47_A 2 SLSDLLYEIQDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEEN 81 (268)
T ss_dssp CCCSEEEEEETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHHHH
T ss_pred CCCEEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHHHH
Confidence 3568999999999999999999999999999999999999999999999999999999999999999986532111
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
..+...+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|+|++| .+++
T Consensus 82 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~A~ 160 (268)
T 3i47_A 82 LEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGERAAK 160 (268)
T ss_dssp HHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHHHHH
Confidence 2334566788899999999999999999999999999999999999999999999999999999988 7889999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||+.|+|+||+++||||+|||++++.. .+.
T Consensus 161 ~llltg~~i~A~eA~~~GLV~~vv~~~~l~~--~a~-------------------------------------------- 194 (268)
T 3i47_A 161 MLFMSAEVFDATRAYSLNLVQHCVPDDTLLE--FTL-------------------------------------------- 194 (268)
T ss_dssp HHHHHCCEEEHHHHHHTTSCSEEECGGGHHH--HHH--------------------------------------------
T ss_pred HHHHcCCccCHHHHHHcCCCcEeeChhHHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999988743 222
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHH-HHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQ-CLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~-~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+++++|++.||.+++.+|++++.....++++ .++.|...+..++.++ |++||++|
T Consensus 195 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~---d~~eg~~A 250 (268)
T 3i47_A 195 ---------------------KYASQISNNAPEAVKNSKQLAQYVANKKIDEELVRYTASLIAHKRVSD---EGQEGLKA 250 (268)
T ss_dssp ---------------------HHHHHHHTSCHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSH---HHHHHHHH
T ss_pred ---------------------HHHHHHHcCCHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 3378999999999999999999988888888 7899999999999765 99999999
Q ss_pred hhccCCCCCCCCCCCc
Q 017189 321 ILLDKDKNPKWKPSKL 336 (375)
Q Consensus 321 ~l~ek~r~P~w~~~~~ 336 (375)
| +|| |+|+|++..+
T Consensus 251 F-~ek-R~p~f~~~~~ 264 (268)
T 3i47_A 251 F-LNK-EIPNWNEGHH 264 (268)
T ss_dssp H-HHT-CCCTTC----
T ss_pred H-HcC-CCCCCCCCCC
Confidence 9 599 8999997654
|
| >3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-58 Score=431.79 Aligned_cols=256 Identities=25% Similarity=0.426 Sum_probs=229.7
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHH
Q 017189 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKF 85 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 85 (375)
++++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ..+
T Consensus 22 m~~~~v~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~~~ 100 (278)
T 3h81_A 22 MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFA-DAF 100 (278)
T ss_dssp -CCSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHH-HHH
T ss_pred CCCCeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChh-hHH
Confidence 3467799999999999999999999999999999999999999999999999999999999999999998654322 122
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
.......+.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|+
T Consensus 101 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~l~ 180 (278)
T 3h81_A 101 TADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLI 180 (278)
T ss_dssp HHTTTGGGHHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHHHHHH
Confidence 222223367889999999999999999999999999999999999999999999999999999999999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||+|||++++.. ++.
T Consensus 181 ltG~~~~A~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------------- 211 (278)
T 3h81_A 181 LTGRTMDAAEAERSGLVSRVVPADDLLT--EAR----------------------------------------------- 211 (278)
T ss_dssp HHCCCEEHHHHHHHTSCSEEECGGGHHH--HHH-----------------------------------------------
T ss_pred HhCCCcCHHHHHHCCCccEEeChhHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999988743 222
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+++++|++.||.+++.+|++++.....+++++++.|...+..++.+ +|++||++|| ++
T Consensus 212 ------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~eg~~AF-~e 269 (278)
T 3h81_A 212 ------------------ATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFAT---EDQSEGMAAF-IE 269 (278)
T ss_dssp ------------------HHHHHHHTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTS---HHHHHHHHHH-HT
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-Hc
Confidence 3378999999999999999999999899999999999999999965 5999999999 59
Q ss_pred CCCCCCCCCC
Q 017189 325 KDKNPKWKPS 334 (375)
Q Consensus 325 k~r~P~w~~~ 334 (375)
| |+|+|+++
T Consensus 270 k-R~P~f~g~ 278 (278)
T 3h81_A 270 K-RAPQFTHR 278 (278)
T ss_dssp T-SCCCCCCC
T ss_pred C-CCCCCCCC
Confidence 9 89999864
|
| >3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-57 Score=424.97 Aligned_cols=251 Identities=24% Similarity=0.372 Sum_probs=228.9
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
++..|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.. ..+.
T Consensus 4 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~-----~~~~ 78 (255)
T 3p5m_A 4 SMNGISVEHDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDT-----AGAA 78 (255)
T ss_dssp CBTTEEEEEETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CH-----HHHH
T ss_pred CCceEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcc-----hHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999998762 1445
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++
T Consensus 79 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 158 (255)
T 3p5m_A 79 DAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAM 158 (255)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHHHH
Confidence 56678889999999999999999999999999999999999999999999999999999999999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.++|+||+++||||+|||++++.....
T Consensus 159 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~-------------------------------------------------- 188 (255)
T 3p5m_A 159 TAEKISAATAFEWGMISHITSADEYESVLT-------------------------------------------------- 188 (255)
T ss_dssp HCCCEEHHHHHHTTSCSEECCTTCHHHHHH--------------------------------------------------
T ss_pred cCCCcCHHHHHHCCCCCEeeCHHHHHHHHH--------------------------------------------------
Confidence 999999999999999999999998744222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.+++|+..||.+++.+|++++.....+++++++.|...+..++.+ +|++||++|| ++|
T Consensus 189 -----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~eg~~af-~ek 247 (255)
T 3p5m_A 189 -----------------DVLRSVSGGPTLAFGWTKRALAAATLAELEPVQAIEAEGQLALVET---ADFREGARAF-RER 247 (255)
T ss_dssp -----------------HHHHHHHTSCHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTTS---HHHHHHHHHH-HTT
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-HcC
Confidence 2378999999999999999999998889999999999999999965 4999999999 599
Q ss_pred CCCCCCCCC
Q 017189 326 DKNPKWKPS 334 (375)
Q Consensus 326 ~r~P~w~~~ 334 (375)
|+|+|+++
T Consensus 248 -r~p~f~g~ 255 (255)
T 3p5m_A 248 -RTPNFRGH 255 (255)
T ss_dssp -SCCCCCCC
T ss_pred -CCCCCCCC
Confidence 89999864
|
| >3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-57 Score=430.00 Aligned_cols=256 Identities=21% Similarity=0.334 Sum_probs=227.8
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch------
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE------ 81 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~------ 81 (375)
+..|.++.+++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||+|++||+|+|++++......
T Consensus 23 ~~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~ 102 (290)
T 3sll_A 23 SFVLVDRPRPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQP 102 (290)
T ss_dssp CCEEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHH
T ss_pred CeEEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccch
Confidence 35688999999999999999999999999999999999999999999999999999999999999988654321
Q ss_pred --hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCC-ccHHHHHhhcch-
Q 017189 82 --GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPD-IGASYFLSRLPG- 157 (375)
Q Consensus 82 --~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~-~g~~~~l~rl~g- 157 (375)
...+...++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +|++++|+|++|
T Consensus 103 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG~ 182 (290)
T 3sll_A 103 TIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIGT 182 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhCH
Confidence 1335566778899999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHh
Q 017189 158 FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCF 237 (375)
Q Consensus 158 ~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f 237 (375)
.++++|++||+.|+|+||+++||||+|||++++.. ++.
T Consensus 183 ~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~--~a~---------------------------------------- 220 (290)
T 3sll_A 183 SRASDIMLTGRDVDADEAERIGLVSRKVASESLLE--ECY---------------------------------------- 220 (290)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHH--HHH----------------------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHH--HHH----------------------------------------
Confidence 67999999999999999999999999999988743 332
Q ss_pred CcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHHh-hCCCcchHH
Q 017189 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL-QGVGQCLIREYRMVCHVM-MGEVSKDFF 315 (375)
Q Consensus 238 ~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~-~~~~s~d~~ 315 (375)
+++++|++.||.+++.+|++++.... .+++++++.|...+..++ .++ |++
T Consensus 221 -------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~---d~~ 272 (290)
T 3sll_A 221 -------------------------AIGERIAGFSRPGIELTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTD---NFE 272 (290)
T ss_dssp -------------------------HHHHHHHHSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCC---HHH
T ss_pred -------------------------HHHHHHHcCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCH---HHH
Confidence 33789999999999999999999988 899999999999999998 866 999
Q ss_pred hhHhhhhccCCCCCCCCCCC
Q 017189 316 EGCRAILLDKDKNPKWKPSK 335 (375)
Q Consensus 316 egv~A~l~ek~r~P~w~~~~ 335 (375)
||++|| +|| |+|+|++++
T Consensus 273 eg~~AF-lek-R~P~f~g~~ 290 (290)
T 3sll_A 273 EATAAR-KEK-RPAEFRDKR 290 (290)
T ss_dssp HHHHHH-HTT-SCCCCCSCC
T ss_pred HHHHHH-HcC-CCCCCCCCC
Confidence 999999 499 899999864
|
| >3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-58 Score=428.81 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=230.9
Q ss_pred CCCcEEEEEeCC-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHH
Q 017189 7 QEDQVLEEETSF-VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKF 85 (375)
Q Consensus 7 ~~~~v~~~~~~~-v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 85 (375)
+++.|.++++++ |++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ..+
T Consensus 7 ~~~~i~~~~~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~~~ 85 (263)
T 3moy_A 7 TYTTIATSRPVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPH-QAR 85 (263)
T ss_dssp CCSSEEEECCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHH-HHH
T ss_pred CCCeEEEEEeCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCch-hHH
Confidence 467899999998 999999999999999999999999999999999999999999999999999999998654322 122
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
...+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|+
T Consensus 86 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~l~ 165 (263)
T 3moy_A 86 ERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLC 165 (263)
T ss_dssp HTTTTHHHHHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHHHHHHH
Confidence 233456778899999999999999999999999999999999999999999999999999999999999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||+|||++++.. .+.
T Consensus 166 ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------------- 196 (263)
T 3moy_A 166 LTGRSLTAEEAERVGLVSRIVPAADLLD--EAL----------------------------------------------- 196 (263)
T ss_dssp HHCCEEEHHHHHHTTSCSEEECGGGHHH--HHH-----------------------------------------------
T ss_pred HcCCCCCHHHHHHCCCccEecCchHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999988743 332
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+++++|+..||.+++.+|++++.....+++++++.|...+..++.+ +|++||++|| +|
T Consensus 197 ------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~eg~~AF-~e 254 (263)
T 3moy_A 197 ------------------AVAQRIARMSRPAGRAVKDAINEAFERPLSAGMRYERDAFYAMFDT---HDQTEGMTAF-LE 254 (263)
T ss_dssp ------------------HHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTS---HHHHHHHHHH-HT
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-Hh
Confidence 3378999999999999999999998899999999999999999965 5999999999 59
Q ss_pred CCCCCCCCCC
Q 017189 325 KDKNPKWKPS 334 (375)
Q Consensus 325 k~r~P~w~~~ 334 (375)
| |+|+|+++
T Consensus 255 k-R~p~f~g~ 263 (263)
T 3moy_A 255 K-RTPEFTDR 263 (263)
T ss_dssp T-SCCCCCCC
T ss_pred C-CCCCCCCC
Confidence 9 89999864
|
| >1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-57 Score=426.65 Aligned_cols=255 Identities=21% Similarity=0.284 Sum_probs=231.3
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc----chh--h
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI----NEG--A 83 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~----~~~--~ 83 (375)
.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... ... .
T Consensus 4 ~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 83 (269)
T 1nzy_A 4 AIGHRVEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHFR 83 (269)
T ss_dssp SEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHHH
T ss_pred eEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHHH
Confidence 5889999999999999999999999999999999999999999999999999999999999999875431 111 2
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.+...+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++
T Consensus 84 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 163 (269)
T 1nzy_A 84 IAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAME 163 (269)
T ss_dssp HHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhHHHHHH
Confidence 34445677888999999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 164 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~--------------------------------------------- 196 (269)
T 1nzy_A 164 LMLTNRTLYPEEAKDWGLVSRVYPKDEFRE--VAW--------------------------------------------- 196 (269)
T ss_dssp HHHHCCCBCHHHHHHHTSCSCEECHHHHHH--HHH---------------------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCccEeeCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999877633 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.+++|++.||.+++.+|++++.....++.++++.|...+..++.++ |++||+++|+
T Consensus 197 --------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~---d~~egi~af~ 253 (269)
T 1nzy_A 197 --------------------KVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASVTHP---HFMPCLTRFL 253 (269)
T ss_dssp --------------------HHHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHST---THHHHHHHHH
T ss_pred --------------------HHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHH
Confidence 23789999999999999999999888899999999999999999765 9999999995
Q ss_pred ccCCCCCCCCCCCc
Q 017189 323 LDKDKNPKWKPSKL 336 (375)
Q Consensus 323 ~ek~r~P~w~~~~~ 336 (375)
+| |+|+|+++++
T Consensus 254 -ek-r~p~f~~~~l 265 (269)
T 1nzy_A 254 -DG-HRADRPQVEL 265 (269)
T ss_dssp -TT-CCTTCCSSCC
T ss_pred -hc-CCCCCCCCCC
Confidence 99 8999998875
|
| >3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-57 Score=427.83 Aligned_cols=254 Identities=21% Similarity=0.346 Sum_probs=217.9
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHh---hccchhh
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVV---RGINEGA 83 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~---~~~~~~~ 83 (375)
.++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++. .......
T Consensus 3 ~~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 82 (266)
T 3fdu_A 3 LHPHLNANLEGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGP 82 (266)
T ss_dssp CCTTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSC
T ss_pred CCCeEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhh
Confidence 3457999999999999999999999999999999999999999999999999999999999999999986 3222111
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.+......++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++
T Consensus 83 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 162 (266)
T 3fdu_A 83 AGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAE 162 (266)
T ss_dssp GGGSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhCHHHHHH
Confidence 23345567888999999999999999999999999999999999999999999999999999999999999999 57999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||+.++|+||+++||||+||| ++.. .+.
T Consensus 163 l~ltg~~i~A~eA~~~GLv~~vv~--~l~~--~a~--------------------------------------------- 193 (266)
T 3fdu_A 163 LLFTAKKFNAETALQAGLVNEIVE--DAYA--TAQ--------------------------------------------- 193 (266)
T ss_dssp HHHHCCEECHHHHHHTTSCSEECS--CHHH--HHH---------------------------------------------
T ss_pred HHHhCCCcCHHHHHHCCCHHHHHH--HHHH--HHH---------------------------------------------
Confidence 999999999999999999999998 5532 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+++++|++.||.+++.+|++++... .+++++++.|...+..++.+ +|++||++||
T Consensus 194 --------------------~~a~~la~~~~~a~~~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s---~d~~eg~~aF- 248 (266)
T 3fdu_A 194 --------------------ATAQHLTALPLASLKQTKALMKHDL-DQIIECIDHEAEIFMQRVQS---PEMLEAVQAF- 248 (266)
T ss_dssp --------------------HHHHHHHTSCHHHHHHHHHHHTTTH-HHHHHHHHHHHHHHHHHHTC---HHHHHHHHHH-
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHhhh-ccHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-
Confidence 3378999999999999999998875 47899999999999999965 4999999999
Q ss_pred ccCCCCCCCCCCC
Q 017189 323 LDKDKNPKWKPSK 335 (375)
Q Consensus 323 ~ek~r~P~w~~~~ 335 (375)
++| |+|+|++..
T Consensus 249 ~ek-R~p~~~~~~ 260 (266)
T 3fdu_A 249 MQK-RQPDFSQEG 260 (266)
T ss_dssp C------------
T ss_pred HcC-CCCCCCCCC
Confidence 599 899998754
|
| >3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-58 Score=432.91 Aligned_cols=254 Identities=22% Similarity=0.268 Sum_probs=228.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFF 86 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 86 (375)
++.|.++++++|++||||||++.|+||.+|+.+|.++++.+ |+++|+|||||.|++||+|+|++++....... ..+.
T Consensus 15 ~~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 92 (275)
T 3hin_A 15 PSTLVVDTVGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDATEGLVHS 92 (275)
T ss_dssp GGGEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCHHHHHHHH
T ss_pred CCeEEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccChhhHHHHH
Confidence 56799999999999999999999999999999999999998 67999999999999999999999986533222 3345
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++
T Consensus 93 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~l 172 (275)
T 3hin_A 93 QTWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMADMML 172 (275)
T ss_dssp HHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 56678889999999999999999999999999999999999999999999999999999999999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.|+|+||+++||||+|||++++.. +++
T Consensus 173 tG~~i~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------ 202 (275)
T 3hin_A 173 TGRVYSAAEGVVHGFSQYLIENGSAYD--KAL------------------------------------------------ 202 (275)
T ss_dssp HCCCEEHHHHHHHTSCSEEESSSCHHH--HHH------------------------------------------------
T ss_pred cCCCCCHHHHHHCCCCCEEeChhHHHH--HHH------------------------------------------------
Confidence 999999999999999999999998843 332
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+++++|+++||.+++.+|+++++....+++++++.|...+..++.++ |++||++|| +||
T Consensus 203 -----------------~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~---d~~eg~~AF-~ek 261 (275)
T 3hin_A 203 -----------------ELGNRVAQNAPLTNFAVLQALPMIAEANPQTGLLMESLMATVAQSDQ---EAKTRIRAF-LDH 261 (275)
T ss_dssp -----------------HHHHHHTTSCHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSH---HHHHHHHHH-HHH
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHH-HcC
Confidence 33789999999999999999999989999999999999999999755 999999999 599
Q ss_pred CCCCCCCCCC
Q 017189 326 DKNPKWKPSK 335 (375)
Q Consensus 326 ~r~P~w~~~~ 335 (375)
|+|+|+++.
T Consensus 262 -R~p~f~~~~ 270 (275)
T 3hin_A 262 -KTAKVREGH 270 (275)
T ss_dssp -HHHHC----
T ss_pred -CCCCCCCCC
Confidence 899998654
|
| >2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-57 Score=422.68 Aligned_cols=260 Identities=18% Similarity=0.253 Sum_probs=233.1
Q ss_pred CCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEee-CCCCccccCCchhHhhcc
Q 017189 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG-KGRAFCAGGDVAAVVRGI 79 (375)
Q Consensus 1 M~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg-~g~~F~aG~Dl~~~~~~~ 79 (375)
|+....+++.|.++.+++|++|||||| +.|+||.+|+.+|.++++.++.|+++|+||||| .|++||+|+|++++....
T Consensus 1 ~~~~~~~~~~i~~~~~~~v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~ 79 (265)
T 2ppy_A 1 MTAVETKKQYLTVFKEDGIAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRSAD 79 (265)
T ss_dssp -CCEEEECSSEEEEEETTEEEEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTTSC
T ss_pred CCccCCCCCeEEEEeeCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhccc
Confidence 555555678899999999999999999 899999999999999999999999999999999 889999999999886521
Q ss_pred chhhHHHHHH-HHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCe-EEeccccccCCCCCccHHHHHhhcch
Q 017189 80 NEGAKFFSKE-FILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENS-VFAMPETALGLFPDIGASYFLSRLPG 157 (375)
Q Consensus 80 ~~~~~~~~~~-~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a-~f~~pe~~~G~~p~~g~~~~l~rl~g 157 (375)
.....+...+ ++++.++.++||||||+|||+|+|||++|+++||+|||++++ +|++||+++|++|++|++++|+|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG 159 (265)
T 2ppy_A 80 PRFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIG 159 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhC
Confidence 1112344455 678889999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred -HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHH
Q 017189 158 -FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKC 236 (375)
Q Consensus 158 -~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (375)
.++++|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 160 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~--------------------------------------- 198 (265)
T 2ppy_A 160 YSRALDMNITGETITPQEALEIGLVNRVFPQAETRE--RTR--------------------------------------- 198 (265)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSSSEEECGGGHHH--HHH---------------------------------------
T ss_pred HHHHHHHHHhCCccCHHHHHHCCCcceecCHHHHHH--HHH---------------------------------------
Confidence 67999999999999999999999999999988743 222
Q ss_pred hCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHh
Q 017189 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFE 316 (375)
Q Consensus 237 f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 316 (375)
+.+++|++.||.+++.+|++++.....+++++++.|...+..++.+ +|++|
T Consensus 199 --------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s---~d~~e 249 (265)
T 2ppy_A 199 --------------------------EYARKLANSATYAVSNIKLAIMNGKEMPLNVAIRYEGELQNLLFRS---EDAKE 249 (265)
T ss_dssp --------------------------HHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTS---HHHHH
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC---HHHHH
Confidence 2378999999999999999999988889999999999999999865 59999
Q ss_pred hHhhhhccCCCCCCCCC
Q 017189 317 GCRAILLDKDKNPKWKP 333 (375)
Q Consensus 317 gv~A~l~ek~r~P~w~~ 333 (375)
|+++|+ +| |+|+|++
T Consensus 250 gi~af~-ek-r~p~~~~ 264 (265)
T 2ppy_A 250 GLSAFL-EK-RQPNWKG 264 (265)
T ss_dssp HHHHHH-TT-SCCCCCC
T ss_pred HHHHHH-cC-CCCCCCC
Confidence 999995 99 8999985
|
| >2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=419.93 Aligned_cols=253 Identities=28% Similarity=0.448 Sum_probs=224.2
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHH-
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFS- 87 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~- 87 (375)
+.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... ..+..
T Consensus 3 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~~~~~~ 81 (257)
T 2ej5_A 3 ETIRYEVKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDH-GDVLRS 81 (257)
T ss_dssp SSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CH-HHHHHH
T ss_pred CceEEEeECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccch-hHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999999987543211 11222
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+++++++|
T Consensus 82 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~lt 161 (257)
T 2ej5_A 82 RYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVL 161 (257)
T ss_dssp THHHHHHHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHHHHHh
Confidence 2567788999999999999999999999999999999999999999999999999999999999999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||+|||++++.. .+.
T Consensus 162 g~~~~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------- 190 (257)
T 2ej5_A 162 GEKVTAEEAAALGLATKVIPLSDWEE--EVK------------------------------------------------- 190 (257)
T ss_dssp CCCEEHHHHHHHTCCSEEECGGGHHH--HHH-------------------------------------------------
T ss_pred CCccCHHHHHHcCCcceecChhHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999988743 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+++++|+..||.+++.+|++++.....+++++++.|...+..++.++ |++||+++| ++|
T Consensus 191 ----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~---d~~eg~~af-~ek- 249 (257)
T 2ej5_A 191 ----------------QFAERLSAMPTKAIGLIKRLLRESEETTFDRYLEREAECQRIAGLTS---DHREGVKAF-FEK- 249 (257)
T ss_dssp ----------------HHHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSH---HHHHHHHHH-TTT-
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCh---HHHHHHHHH-hcC-
Confidence 23789999999999999999999888899999999999999999765 999999999 499
Q ss_pred CCCCCCCC
Q 017189 327 KNPKWKPS 334 (375)
Q Consensus 327 r~P~w~~~ 334 (375)
|+|+|+++
T Consensus 250 r~p~~~~~ 257 (257)
T 2ej5_A 250 RKPLFQGN 257 (257)
T ss_dssp CCCCCCCC
T ss_pred CCCCCCCC
Confidence 89999863
|
| >3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-58 Score=438.25 Aligned_cols=257 Identities=24% Similarity=0.346 Sum_probs=183.8
Q ss_pred CCCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhh---ccch-
Q 017189 7 QEDQVLEEETS-FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVR---GINE- 81 (375)
Q Consensus 7 ~~~~v~~~~~~-~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~---~~~~- 81 (375)
+++.|.+++++ +|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.. ....
T Consensus 27 ~~~~v~~~~~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~ 106 (298)
T 3qre_A 27 AQDAVLYEATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTM 106 (298)
T ss_dssp -CCSEEEEECTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------
T ss_pred CCCeEEEEEeCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 35779999999 999999999999999999999999999999999999999999999999999999998864 1111
Q ss_pred ----h-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc
Q 017189 82 ----G-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLP 156 (375)
Q Consensus 82 ----~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~ 156 (375)
. ..+......++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~v 186 (298)
T 3qre_A 107 AKAKDANLADLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLT 186 (298)
T ss_dssp --------------CCTTGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHHS
T ss_pred ccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHhc
Confidence 1 11122234566778899999999999999999999999999999999999999999999999999999999999
Q ss_pred h-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHH
Q 017189 157 G-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235 (375)
Q Consensus 157 g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (375)
| .++++|++||+.++|+||+++||||+|||++++.. ++.
T Consensus 187 G~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~--~a~-------------------------------------- 226 (298)
T 3qre_A 187 SWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMP--RAL-------------------------------------- 226 (298)
T ss_dssp CHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHH--HHH--------------------------------------
T ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHH--HHH--------------------------------------
Confidence 9 67999999999999999999999999999988743 332
Q ss_pred HhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhc-CCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchH
Q 017189 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKA-SPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDF 314 (375)
Q Consensus 236 ~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~-sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~ 314 (375)
+.+++|+.. ||.+++.+|+++++....++.++++.|...+..++.++ |+
T Consensus 227 ---------------------------~~A~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~---d~ 276 (298)
T 3qre_A 227 ---------------------------EYAEDIARYCSPSSMAVIKRQVYGDATRDVVEATSHAEVLLREAMPRP---DV 276 (298)
T ss_dssp ---------------------------HHHHHHHHHSCHHHHHHHHHHHHGGGGC-------------------------
T ss_pred ---------------------------HHHHHHHccCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCH---HH
Confidence 237899998 99999999999999998899999999999998888654 99
Q ss_pred HhhHhhhhccCCCCCCCCCCC
Q 017189 315 FEGCRAILLDKDKNPKWKPSK 335 (375)
Q Consensus 315 ~egv~A~l~ek~r~P~w~~~~ 335 (375)
+||++|| +|| |+|+|+++.
T Consensus 277 ~Egv~AF-~ek-R~P~f~~~~ 295 (298)
T 3qre_A 277 IEGIVSF-LEK-RPPQFPSLT 295 (298)
T ss_dssp ---------------------
T ss_pred HHHHHHH-HcC-CCCCCCCCC
Confidence 9999999 599 899999764
|
| >3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=424.67 Aligned_cols=253 Identities=24% Similarity=0.345 Sum_probs=231.2
Q ss_pred EEEEEe--CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--hHHH
Q 017189 11 VLEEET--SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--AKFF 86 (375)
Q Consensus 11 v~~~~~--~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--~~~~ 86 (375)
|.++++ ++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..+.
T Consensus 26 v~~~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~~ 105 (286)
T 3myb_A 26 LLLQDRDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSREYYEKLF 105 (286)
T ss_dssp SEEEEECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHHHHHHHH
T ss_pred EEEEEecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHHHHHHHH
Confidence 899999 999999999999999999999999999999999999999999999999999999999987622211 4556
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++| .++++|++
T Consensus 106 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~~A~~lll 184 (286)
T 3myb_A 106 ARCTDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRKAAFEMLV 184 (286)
T ss_dssp HHHHHHHHHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHHHHHHHHH
Confidence 677888999999999999999999999999999999999999999999999999999 7888999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.++|+||+++||||+|||++++.. .+.
T Consensus 185 tG~~i~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------ 214 (286)
T 3myb_A 185 TGEFVSADDAKGLGLVNRVVAPKALDD--EIE------------------------------------------------ 214 (286)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHH--HHH------------------------------------------------
T ss_pred cCCCCCHHHHHHCCCCcEecCHHHHHH--HHH------------------------------------------------
Confidence 999999999999999999999988744 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+++++|+..||.+++.+|++++.....+++++++.|...+..++.++ |++||+++|+ +|
T Consensus 215 -----------------~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~---d~~egi~aFl-ek 273 (286)
T 3myb_A 215 -----------------AMVSKIVAKPRAAVAMGKALFYRQIETDIESAYADAGTTMACNMMDP---SALEGVSAFL-EK 273 (286)
T ss_dssp -----------------HHHHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSH---HHHHHHHHHH-TT
T ss_pred -----------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHH-cc
Confidence 23789999999999999999999988999999999999999999765 9999999994 99
Q ss_pred CCCCCCCCCCc
Q 017189 326 DKNPKWKPSKL 336 (375)
Q Consensus 326 ~r~P~w~~~~~ 336 (375)
|+|+|+++..
T Consensus 274 -r~p~f~g~~p 283 (286)
T 3myb_A 274 -RRPEWHTPQP 283 (286)
T ss_dssp -SCCCCCCCC-
T ss_pred -CCCCCCCCCC
Confidence 8999998754
|
| >2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=420.20 Aligned_cols=254 Identities=24% Similarity=0.400 Sum_probs=227.8
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFS 87 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 87 (375)
+..|.++.+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.........+..
T Consensus 4 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (258)
T 2pbp_A 4 FVSIAARQEGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPIRLEWLN 83 (258)
T ss_dssp CCSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHHHHHHHC
T ss_pred cceEEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccchhHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999988643221112222
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+ +++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+++++++|
T Consensus 84 ~~-~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~lt 162 (258)
T 2pbp_A 84 QF-ADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWT 162 (258)
T ss_dssp TT-HHHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHH
T ss_pred HH-HHHHHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHHHHHHHHc
Confidence 23 5677899999999999999999999999999999999999999999999999999999999999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||+|||++++.. ++.
T Consensus 163 g~~~~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------- 191 (258)
T 2pbp_A 163 GARMSAKEAEQLGIVNRVVSPELLME--ETM------------------------------------------------- 191 (258)
T ss_dssp CCCEEHHHHHHTTSCSEEECGGGHHH--HHH-------------------------------------------------
T ss_pred CCccCHHHHHHcCCcceeeChHHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999988743 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+.+++|+..||.+++.+|++++.....+++++++.|.+.+..++.+ +|++||+++|+ +|
T Consensus 192 ----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s---~d~~eg~~af~-ek- 250 (258)
T 2pbp_A 192 ----------------RLAGRLAEQPPLALRLIKEAVQKAVDYPLYEGMQFERKNFYLLFAS---EDQKEGMAAFL-EK- 250 (258)
T ss_dssp ----------------HHHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTS---HHHHHHHHHHH-TT-
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHH-cc-
Confidence 2378999999999999999999998889999999999999999865 59999999995 99
Q ss_pred CCCCCCCC
Q 017189 327 KNPKWKPS 334 (375)
Q Consensus 327 r~P~w~~~ 334 (375)
|+|+|+++
T Consensus 251 r~p~~~~~ 258 (258)
T 2pbp_A 251 RKPRFQGK 258 (258)
T ss_dssp SCCCCCCC
T ss_pred CCCCCCCC
Confidence 89999863
|
| >3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-58 Score=429.25 Aligned_cols=255 Identities=23% Similarity=0.320 Sum_probs=227.4
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFF 86 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 86 (375)
++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++....... ..+.
T Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 87 (265)
T 3swx_A 8 YETLRIRRDGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGASLTP 87 (265)
T ss_dssp CSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CCCCC
T ss_pred CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhHHHH
Confidence 578999999999999999999999999999999999999999999999999999998899999999986532211 1111
Q ss_pred HHHHHHHHHH-HhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 87 SKEFILNYLM-ATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 87 ~~~~~l~~~i-~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
....+++.++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|+
T Consensus 88 ~~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~ 167 (265)
T 3swx_A 88 EGGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWM 167 (265)
T ss_dssp TTCCCTTCCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHHHHHHHH
Confidence 2223345567 8999999999999999999999999999999999999999999999999999999999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||+|||++++.. .++
T Consensus 168 ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------------- 198 (265)
T 3swx_A 168 LTADTFDAVEAHRIGIVQEIVPVGEHVD--TAI----------------------------------------------- 198 (265)
T ss_dssp TTCCCEEHHHHHHTTSCSEEESTTCHHH--HHH-----------------------------------------------
T ss_pred HcCCcCCHHHHHHcCCCCEecChhHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999988743 332
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+++++|++.||.+++.+|+++++....+++++++.|...+..++.+ +|++||++|| ++
T Consensus 199 ------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s---~d~~eg~~af-~e 256 (265)
T 3swx_A 199 ------------------AIAQTIARQAPLGVQATLRNARLAVREGDAAAEEQLVPTVRELFTS---EDATLGVQAF-LS 256 (265)
T ss_dssp ------------------HHHHHHHHSCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTS---HHHHHHHHHH-HT
T ss_pred ------------------HHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-hc
Confidence 2378999999999999999999988889999999999999999975 4999999999 59
Q ss_pred CCCCCCCCCC
Q 017189 325 KDKNPKWKPS 334 (375)
Q Consensus 325 k~r~P~w~~~ 334 (375)
| |+|+|+++
T Consensus 257 k-r~p~f~g~ 265 (265)
T 3swx_A 257 R-TTAEFVGR 265 (265)
T ss_dssp T-CCCCCCCC
T ss_pred C-CCCCCCCC
Confidence 9 89999864
|
| >3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-57 Score=422.90 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=221.1
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFS 87 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 87 (375)
++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++ ... ......+..
T Consensus 8 ~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~-~~~~~~~~~ 85 (265)
T 3rsi_A 8 ARELLVERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGW-MVRDGSAPP 85 (265)
T ss_dssp -CCEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC----------------C
T ss_pred CCcEEEEEECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-ccc-ccchHHHHH
Confidence 567999999999999999999999999999999999999999999999999999999999999998 221 111112222
Q ss_pred HHHH-HHHHH-H--hCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 88 KEFI-LNYLM-A--TYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 88 ~~~~-l~~~i-~--~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.... ++..+ . ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++
T Consensus 86 ~~~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 165 (265)
T 3rsi_A 86 LDPATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAME 165 (265)
T ss_dssp CCHHHHHHHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCHHHHHH
T ss_pred HhHHHHHHHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHH
Confidence 2344 77788 8 999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 166 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~--------------------------------------------- 198 (265)
T 3rsi_A 166 MILTGEPLTAFEAYHFGLVGHVVPAGTALD--KAR--------------------------------------------- 198 (265)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEESTTCHHH--HHH---------------------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCccEecChhHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999998743 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+++++|++.||.+++.+|++++.....+++++++.|...+..++.+ +|++||++||+
T Consensus 199 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s---~d~~eg~~af~ 255 (265)
T 3rsi_A 199 --------------------SLADRIVRNGPLAVRNAKEAIVRSGWLAEEDARAIEARLTRPVITS---ADAREGLAAFK 255 (265)
T ss_dssp --------------------HHHHHHHTSCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTS---HHHHHHHHHHH
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence 3378999999999999999999998889999999999999999965 59999999994
Q ss_pred ccCCCCCCCCCC
Q 017189 323 LDKDKNPKWKPS 334 (375)
Q Consensus 323 ~ek~r~P~w~~~ 334 (375)
|| |+|+|+++
T Consensus 256 -ek-r~p~f~g~ 265 (265)
T 3rsi_A 256 -EK-REARFTGR 265 (265)
T ss_dssp -HT-SCCCCCCC
T ss_pred -cC-CCCCCCCC
Confidence 99 89999864
|
| >3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-58 Score=430.18 Aligned_cols=255 Identities=25% Similarity=0.432 Sum_probs=228.4
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFF 86 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 86 (375)
++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..++
T Consensus 6 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 85 (265)
T 3qxz_A 6 VTELHEEIRDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNPDF 85 (265)
T ss_dssp CCEEEEEEETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSSCC
T ss_pred cceEEEEEECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHHHH
Confidence 567999999999999999999999999999999999999999999999999999999999999999886543221 1122
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
.. +.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++
T Consensus 86 ~~-~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 164 (265)
T 3qxz_A 86 SA-SPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLL 164 (265)
T ss_dssp CS-CCSSSCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHHHH
Confidence 22 45667789999999999999999999999999999999999999999999999999999999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.++|+||+++||||+|||++++.. .+.
T Consensus 165 tg~~~~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------ 194 (265)
T 3qxz_A 165 TGASFSAQRAVETGLANRCLPAGKVLG--AAL------------------------------------------------ 194 (265)
T ss_dssp HCCCBCHHHHHHHTSCSEEECHHHHHH--HHH------------------------------------------------
T ss_pred cCCCcCHHHHHHCCCccEeeCHHHHHH--HHH------------------------------------------------
Confidence 999999999999999999999877633 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhc-CCchHHHHHHHHHhhhcCCHHHH--HHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 246 LSALESESTNRADAWISDAIQSLKKA-SPTSLKISLRSIREGRLQGVGQC--LIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~-sp~a~~~~k~~l~~~~~~~l~~~--l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+++++|+.. ||.+++.+|+++++....+++++ ++.|...+..++.++ |++||++||+
T Consensus 195 -----------------~~a~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~---d~~egi~Af~ 254 (265)
T 3qxz_A 195 -----------------RMAHDIATNVAPESAALTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQ---DAAEGPRAFI 254 (265)
T ss_dssp -----------------HHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTST---HHHHHHHHHH
T ss_pred -----------------HHHHHHHccCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCCh---HHHHHHHHHH
Confidence 337899999 99999999999999888888899 999999999999765 9999999995
Q ss_pred ccCCCCCCCCCCC
Q 017189 323 LDKDKNPKWKPSK 335 (375)
Q Consensus 323 ~ek~r~P~w~~~~ 335 (375)
+| |+|+|++++
T Consensus 255 -ek-r~P~f~g~r 265 (265)
T 3qxz_A 255 -DG-RPPRWAGQR 265 (265)
T ss_dssp -HT-SCCCCCCC-
T ss_pred -cC-CCCCCCCCC
Confidence 99 899999763
|
| >2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-57 Score=424.54 Aligned_cols=265 Identities=21% Similarity=0.307 Sum_probs=209.2
Q ss_pred CCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc
Q 017189 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN 80 (375)
Q Consensus 1 M~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 80 (375)
|++...+++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 1 ~~~~~~~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~ 80 (276)
T 2j5i_A 1 MSTYEGRWKTVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVD 80 (276)
T ss_dssp --CCTTCCSSEEEEEETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHH
T ss_pred CCcccCCCceEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccc
Confidence 66667788899999999999999999999999999999999999999999999999999999999999999998753211
Q ss_pred h-h----hHHHHHHHHH-HHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhh
Q 017189 81 E-G----AKFFSKEFIL-NYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSR 154 (375)
Q Consensus 81 ~-~----~~~~~~~~~l-~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r 154 (375)
. . ..+....+.+ +.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r 160 (276)
T 2j5i_A 81 AGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMAD 160 (276)
T ss_dssp HSCTTHHHHHHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHH
Confidence 1 0 1122222333 56778999999999999999999999999999999999999999999999999999999999
Q ss_pred cch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHH
Q 017189 155 LPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVI 233 (375)
Q Consensus 155 l~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 233 (375)
++| .++++|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 161 ~vG~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------ 202 (276)
T 2j5i_A 161 TVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQLRE--VTI------------------------------------ 202 (276)
T ss_dssp HSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHH--HHH------------------------------------
T ss_pred HhCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHH--HHH------------------------------------
Confidence 999 67999999999999999999999999999887643 222
Q ss_pred HHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcc-
Q 017189 234 DKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSK- 312 (375)
Q Consensus 234 ~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~- 312 (375)
+++++|++.||.+++.+|+++++....++.++++.|...+..+... .++
T Consensus 203 -----------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~-~s~~ 252 (276)
T 2j5i_A 203 -----------------------------ELARNLLEKNPVVLRAAKHGFKRCRELTWEQNEDYLYAKLDQSRLL-DTEG 252 (276)
T ss_dssp -----------------------------HHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH-C---
T ss_pred -----------------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhhc-CChH
Confidence 3378999999999999999999988889999999988877665221 257
Q ss_pred hHHhhHhhhhccCC-CCCCCCCC
Q 017189 313 DFFEGCRAILLDKD-KNPKWKPS 334 (375)
Q Consensus 313 d~~egv~A~l~ek~-r~P~w~~~ 334 (375)
|++||++|| +||+ |+|+|++.
T Consensus 253 d~~eg~~AF-~ekr~r~p~~~~~ 274 (276)
T 2j5i_A 253 GREQGMKQF-LDDKSIKPGLQAY 274 (276)
T ss_dssp -----------------------
T ss_pred HHHHHHHHH-HhcccCCCCcccC
Confidence 999999999 5884 58999864
|
| >3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=421.08 Aligned_cols=254 Identities=19% Similarity=0.264 Sum_probs=223.5
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCc-cccCCchhHhh--c--cch
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAF-CAGGDVAAVVR--G--INE 81 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F-~aG~Dl~~~~~--~--~~~ 81 (375)
+++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||+|++| |+|+|++++.. . ...
T Consensus 2 s~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~ 81 (263)
T 3lke_A 2 SLSYVHTEIQNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDV 81 (263)
T ss_dssp -CCSEEEEECSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSH
T ss_pred CCcEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHH
Confidence 366799999999999999999999999999999999999999999999999999999999 99999999876 1 111
Q ss_pred h-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HH
Q 017189 82 G-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FF 159 (375)
Q Consensus 82 ~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~ 159 (375)
. ..+...+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~~~ 161 (263)
T 3lke_A 82 RLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQ 161 (263)
T ss_dssp HHHHHHHHHHHHHHHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCHHH
Confidence 1 445667778999999999999999999999999999999999999999999999999999999999999999999 67
Q ss_pred HHHHhhcCCccCHHHHHHcCccceecC-CccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 160 GEYVGLTGARLDGAEMRACGLATHFVP-SSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 160 a~~l~ltG~~i~A~eA~~~GLv~~vv~-~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
+++|++||+.++|+||+++||||+||| ++++.. .+.
T Consensus 162 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~--~a~----------------------------------------- 198 (263)
T 3lke_A 162 TMNLLLEGKLFTSEEALRLGLIQEICENKQELQE--RVK----------------------------------------- 198 (263)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHH--HHH-----------------------------------------
T ss_pred HHHHHHhCCCcCHHHHHHcCCCcEecCChhHHHH--HHH-----------------------------------------
Confidence 999999999999999999999999999 777633 222
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhH
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGC 318 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv 318 (375)
+.+++|++.||.+++.+|++++.....+++++++.|...+..++.+ +|++||+
T Consensus 199 ------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s---~d~~e~~ 251 (263)
T 3lke_A 199 ------------------------NYLKAVSEGYVPAIAATKKLLKGKAAEELKQQLEQETEELVALFKQ---TEIKKRL 251 (263)
T ss_dssp ------------------------HHHHHHHTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTS---HHHHHHH
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhcC---HHHHHHH
Confidence 3378999999999999999999988888999999999999999965 5999999
Q ss_pred hhhhccCCCCCCCC
Q 017189 319 RAILLDKDKNPKWK 332 (375)
Q Consensus 319 ~A~l~ek~r~P~w~ 332 (375)
++| +|| +.|.|.
T Consensus 252 ~~~-~~~-~~~~~~ 263 (263)
T 3lke_A 252 EAL-VEG-HHHHHH 263 (263)
T ss_dssp HHC-----------
T ss_pred Hhh-hcc-CCCCCC
Confidence 999 698 888884
|
| >3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-57 Score=427.14 Aligned_cols=254 Identities=27% Similarity=0.364 Sum_probs=222.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-------
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN------- 80 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~------- 80 (375)
++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 10 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 89 (274)
T 3tlf_A 10 FDTIKYEVDGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPY 89 (274)
T ss_dssp CSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CT
T ss_pred CCceEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccch
Confidence 4579999999999999999999999999999999999999999999999999999999999999998865332
Q ss_pred hh-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H
Q 017189 81 EG-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F 158 (375)
Q Consensus 81 ~~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~ 158 (375)
.. ...+..++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++| .
T Consensus 90 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~~ 168 (274)
T 3tlf_A 90 LSTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPRS 168 (274)
T ss_dssp TCSGGGGSCCCTTCCCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCHH
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCHH
Confidence 00 11222334566778899999999999999999999999999999999999999999999999 999999999999 6
Q ss_pred HHHHHhhcCC--ccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHH
Q 017189 159 FGEYVGLTGA--RLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKC 236 (375)
Q Consensus 159 ~a~~l~ltG~--~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (375)
++++|++||+ .++|+||+++||||+|||++++.. .+.
T Consensus 169 ~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~--~a~--------------------------------------- 207 (274)
T 3tlf_A 169 IALRMALMGKHERMSAQRAYELGLISEIVEHDRLLE--RAH--------------------------------------- 207 (274)
T ss_dssp HHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHH--HHH---------------------------------------
T ss_pred HHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHH--HHH---------------------------------------
Confidence 7999999999 999999999999999999988743 222
Q ss_pred hCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHh
Q 017189 237 FSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFE 316 (375)
Q Consensus 237 f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~e 316 (375)
+++++|++.||.+++.+|++++.....+++++++.|...+..++.++ |++|
T Consensus 208 --------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~---d~~e 258 (274)
T 3tlf_A 208 --------------------------EIADIVNSNAPLAVRGTRLAILKGLNVPLHEAEILAETFRERVLRTE---DAAE 258 (274)
T ss_dssp --------------------------HHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSH---HHHH
T ss_pred --------------------------HHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCH---HHHH
Confidence 33789999999999999999999988899999999999999999754 9999
Q ss_pred hHhhhhccCCCCCCCCCC
Q 017189 317 GCRAILLDKDKNPKWKPS 334 (375)
Q Consensus 317 gv~A~l~ek~r~P~w~~~ 334 (375)
|++||+ +| |+|+|+++
T Consensus 259 g~~af~-ek-r~p~f~g~ 274 (274)
T 3tlf_A 259 GPRAFV-EK-RQPNWQCR 274 (274)
T ss_dssp HHHHHH-TT-SCCCCCCC
T ss_pred HHHHHh-cC-CCCCCCCC
Confidence 999994 99 89999864
|
| >4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-57 Score=425.58 Aligned_cols=255 Identities=27% Similarity=0.408 Sum_probs=216.2
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
+...|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... .+.
T Consensus 18 ~~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~ 96 (278)
T 4f47_A 18 SGPDALVEQRGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGD-SFK 96 (278)
T ss_dssp -CCSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC-------------------
T ss_pred CCCceEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhh-hHH
Confidence 3567999999999999999999999999999999999999999999999999999999999999999886543211 111
Q ss_pred H--HHHHHHHHHH---hCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 87 S--KEFILNYLMA---TYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 87 ~--~~~~l~~~i~---~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
. ....++..+. ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++
T Consensus 97 ~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a 176 (278)
T 4f47_A 97 DGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVA 176 (278)
T ss_dssp ----CTTCBTTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHHH
Confidence 1 1223445566 899999999999999999999999999999999999999999999999999999999999 679
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
++|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 177 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------- 211 (278)
T 4f47_A 177 CDLLLTGRHITAAEAKEMGLVGHVVPDGQALT--KAL------------------------------------------- 211 (278)
T ss_dssp HHHHHHCCCEEHHHHHHTTSCSEEECTTCHHH--HHH-------------------------------------------
T ss_pred HHHHHcCCcCCHHHHHHCCCceEeeChhHHHH--HHH-------------------------------------------
Confidence 99999999999999999999999999998743 222
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+++++|++.||.+++.+|++++.....+++++++.|...+..++.++ |++||++|
T Consensus 212 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~---d~~eg~~A 266 (278)
T 4f47_A 212 ----------------------EIAEIIAANGPLAVQAILRTIRETEGMHENEAFKIDTRIGIEVFLSD---DAKEGPQA 266 (278)
T ss_dssp ----------------------HHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSS---HHHHHHHH
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCH---HHHHHHHH
Confidence 33789999999999999999999988899999999999999999765 99999999
Q ss_pred hhccCCCCCCCCCC
Q 017189 321 ILLDKDKNPKWKPS 334 (375)
Q Consensus 321 ~l~ek~r~P~w~~~ 334 (375)
|+ +| |+|+|+++
T Consensus 267 f~-ek-r~p~f~g~ 278 (278)
T 4f47_A 267 FA-QK-RKPNFQNR 278 (278)
T ss_dssp HH-TT-SCCCCCCC
T ss_pred Hh-cC-CCCCCCCC
Confidence 94 99 89999864
|
| >2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-56 Score=422.08 Aligned_cols=253 Identities=20% Similarity=0.307 Sum_probs=228.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--hHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--AKF 85 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--~~~ 85 (375)
...|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..+
T Consensus 32 ~~~v~~~~~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~ 111 (287)
T 2vx2_A 32 PRPTSARQLDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEV 111 (287)
T ss_dssp CCSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHH
T ss_pred CcceEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHH
Confidence 457999999999999999999999999999999999999999999999999999999999999999875432111 334
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
...+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ |+|++| .++++|+
T Consensus 112 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~ll 190 (287)
T 2vx2_A 112 FQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEML 190 (287)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHHHH
Confidence 45667888899999999999999999999999999999999999999999999999999999999 999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||+|||++++.. .+.
T Consensus 191 ltg~~i~A~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------------- 221 (287)
T 2vx2_A 191 FTGEPISAQEALLHGLLSKVVPEAELQE--ETM----------------------------------------------- 221 (287)
T ss_dssp HHCCCEEHHHHHHHTSCSEEECGGGHHH--HHH-----------------------------------------------
T ss_pred HhCCCCCHHHHHHCCCcceecCHHHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999988743 222
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+.+++|++.||.+++.+|++++.....++.++++.|...+..++.+ +|++||+++|+ +
T Consensus 222 ------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~egi~af~-e 279 (287)
T 2vx2_A 222 ------------------RIARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLAL---RDGQEGITAFL-Q 279 (287)
T ss_dssp ------------------HHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTS---HHHHHHHHHHH-T
T ss_pred ------------------HHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHH-c
Confidence 2378999999999999999999988889999999999999999965 49999999995 9
Q ss_pred CCCCCCCCC
Q 017189 325 KDKNPKWKP 333 (375)
Q Consensus 325 k~r~P~w~~ 333 (375)
| |+|+|++
T Consensus 280 k-r~p~f~g 287 (287)
T 2vx2_A 280 K-RKPVWSH 287 (287)
T ss_dssp T-SCCCCCC
T ss_pred C-CCCCCCC
Confidence 9 8999974
|
| >3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-56 Score=423.14 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=219.3
Q ss_pred CCCCCCCCCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc
Q 017189 1 MASAQSQEDQVLEEETS-FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI 79 (375)
Q Consensus 1 M~~~~~~~~~v~~~~~~-~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~ 79 (375)
|+.....++.|.+++++ +|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....
T Consensus 5 m~~~~~~~~~v~~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~ 83 (272)
T 3qk8_A 5 MPLTYQDFPSLRFEPGEHGVLNLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETI 83 (272)
T ss_dssp ---CGGGCTTEEEEECSTTEEEEEECCHH-HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHH
T ss_pred CCCCCCCCCeEEEEEeCCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccc
Confidence 44333457789999986 89999999999 99999999999999999999999999999999999999999999986532
Q ss_pred chh---hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc
Q 017189 80 NEG---AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLP 156 (375)
Q Consensus 80 ~~~---~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~ 156 (375)
... ..+....++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~v 163 (272)
T 3qk8_A 84 GDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLV 163 (272)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHh
Confidence 211 34556677888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHH
Q 017189 157 G-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235 (375)
Q Consensus 157 g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (375)
| .++++|++||+.++|+||+++||||+|||++++.. ++.
T Consensus 164 G~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~--~a~-------------------------------------- 203 (272)
T 3qk8_A 164 GMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDEVLP--TAT-------------------------------------- 203 (272)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHH--HHH--------------------------------------
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCCcEeeCHhHHHH--HHH--------------------------------------
Confidence 9 67999999999999999999999999999988743 222
Q ss_pred HhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhhCCCcc
Q 017189 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL---QGVGQCLIREYRMVCHVMMGEVSK 312 (375)
Q Consensus 236 ~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~---~~l~~~l~~e~~~~~~~~~~~~s~ 312 (375)
+++++|+..||.+++.+|++++.... ..+++.++.| ..++.+ +
T Consensus 204 ---------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s---~ 249 (272)
T 3qk8_A 204 ---------------------------RLAENLAQGAQNAIRWTKRSLNHWYRMFGPTFETSLGLE----FLGFTG---P 249 (272)
T ss_dssp ---------------------------HHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH----HHHTTS---S
T ss_pred ---------------------------HHHHHHHcCCHHHHHHHHHHHHHHHhhcchhHHHHHHHH----HHHhCC---H
Confidence 33789999999999999999987654 3344444444 456654 5
Q ss_pred hHHhhHhhhhccCCCCCCCCCCC
Q 017189 313 DFFEGCRAILLDKDKNPKWKPSK 335 (375)
Q Consensus 313 d~~egv~A~l~ek~r~P~w~~~~ 335 (375)
|++||++|| +|| |+|+|++++
T Consensus 250 d~~eg~~Af-~ek-R~p~f~g~~ 270 (272)
T 3qk8_A 250 DVQEGLAAH-RQK-RPARFTDRT 270 (272)
T ss_dssp HHHHHHHHH-HTT-SCCCC----
T ss_pred HHHHHHHHH-HcC-CCCCCCCCC
Confidence 999999999 599 899999865
|
| >3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-56 Score=417.51 Aligned_cols=249 Identities=22% Similarity=0.363 Sum_probs=223.2
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSK 88 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 88 (375)
+.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++......... ..
T Consensus 7 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~--~~ 84 (256)
T 3trr_A 7 DEVLIEQRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE--RG 84 (256)
T ss_dssp CSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEET--TE
T ss_pred CceEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhh--hh
Confidence 4699999999999999999999999999999999999999999999999999999999999999998653221110 00
Q ss_pred HHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcC
Q 017189 89 EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTG 167 (375)
Q Consensus 89 ~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG 167 (375)
+ .+ ..+ .+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++||
T Consensus 85 ~-~~-~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ltg 161 (256)
T 3trr_A 85 L-GF-TNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTG 161 (256)
T ss_dssp E-TT-SSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHHHHHHHHC
T ss_pred h-hH-HHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHHHHHHHhC
Confidence 0 12 234 899999999999999999999999999999999999999999999999999999999999 6799999999
Q ss_pred CccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILS 247 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~ 247 (375)
+.++|+||+++||||+|||++++.. .+.
T Consensus 162 ~~~~a~eA~~~GLv~~vv~~~~l~~--~a~-------------------------------------------------- 189 (256)
T 3trr_A 162 ESFTAEDAAKYGFINRLVDDGQALD--TAL-------------------------------------------------- 189 (256)
T ss_dssp CCEEHHHHGGGTCCSEEECTTCHHH--HHH--------------------------------------------------
T ss_pred CCcCHHHHHHCCCeeEecChHHHHH--HHH--------------------------------------------------
Confidence 9999999999999999999998743 222
Q ss_pred HHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCC
Q 017189 248 ALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDK 327 (375)
Q Consensus 248 ~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r 327 (375)
+++++|+..||.+++.+|++++.....+++++++.|...+..++.+ +|++||++||+ +| |
T Consensus 190 ---------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~eg~~af~-ek-r 249 (256)
T 3trr_A 190 ---------------ELAAKITANGPLAVAATKRIIIESASWAPEEAFAKQGEILMPIFVS---EDAKEGAKAFA-EK-R 249 (256)
T ss_dssp ---------------HHHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTS---HHHHHHHHHHH-TT-S
T ss_pred ---------------HHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHh-cC-C
Confidence 3378999999999999999999999999999999999999999975 49999999995 99 8
Q ss_pred CCCCCCC
Q 017189 328 NPKWKPS 334 (375)
Q Consensus 328 ~P~w~~~ 334 (375)
+|+|+++
T Consensus 250 ~p~f~g~ 256 (256)
T 3trr_A 250 APVWQGK 256 (256)
T ss_dssp CCCCCCC
T ss_pred CCCCCCC
Confidence 9999874
|
| >1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-55 Score=417.43 Aligned_cols=255 Identities=20% Similarity=0.329 Sum_probs=227.1
Q ss_pred CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc-----h
Q 017189 8 EDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN-----E 81 (375)
Q Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-----~ 81 (375)
|+.|.+++ .++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... +
T Consensus 2 ~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 81 (275)
T 1dci_A 2 YESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDD 81 (275)
T ss_dssp CSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSS
T ss_pred CceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccch
Confidence 45788998 68899999999999999999999999999999999999999999999999999999998754310 1
Q ss_pred -h------hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhh
Q 017189 82 -G------AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSR 154 (375)
Q Consensus 82 -~------~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r 154 (375)
. ..+...+.+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r 161 (275)
T 1dci_A 82 VARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPK 161 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGG
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHH
Confidence 0 122344567788899999999999999999999999999999999999999999999999999999999999
Q ss_pred cchH--HHHHHhhcCCccCHHHHHHcCccceecCC-ccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHH
Q 017189 155 LPGF--FGEYVGLTGARLDGAEMRACGLATHFVPS-SRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMD 231 (375)
Q Consensus 155 l~g~--~a~~l~ltG~~i~A~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (375)
++|. ++++|++||+.++|+||+++||||+|||+ +++.. ++.
T Consensus 162 ~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~--~a~---------------------------------- 205 (275)
T 1dci_A 162 VIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLN--AAF---------------------------------- 205 (275)
T ss_dssp TCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHH--HHH----------------------------------
T ss_pred HhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHH--HHH----------------------------------
Confidence 9995 59999999999999999999999999998 77632 222
Q ss_pred HHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCc
Q 017189 232 VIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVS 311 (375)
Q Consensus 232 ~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s 311 (375)
+++++|++.||.+++.+|++++.....++.++++.|...+..++.+
T Consensus 206 -------------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s--- 251 (275)
T 1dci_A 206 -------------------------------ALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQT--- 251 (275)
T ss_dssp -------------------------------HHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSS---
T ss_pred -------------------------------HHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcC---
Confidence 3378999999999999999999988889999999999999988865
Q ss_pred chHHhhHhhhhccCC--CCCCCCC
Q 017189 312 KDFFEGCRAILLDKD--KNPKWKP 333 (375)
Q Consensus 312 ~d~~egv~A~l~ek~--r~P~w~~ 333 (375)
+|++||++||+ +|+ |+|+|++
T Consensus 252 ~d~~eg~~af~-ek~~~r~p~f~~ 274 (275)
T 1dci_A 252 QDIIKSVQAAM-EKKDSKSITFSK 274 (275)
T ss_dssp HHHHHHHHHHH-TTCCGGGCCCCC
T ss_pred HHHHHHHHHHH-hcCCCCCCCCCC
Confidence 59999999995 885 7899985
|
| >3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-57 Score=423.18 Aligned_cols=254 Identities=27% Similarity=0.414 Sum_probs=223.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AKF 85 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~~ 85 (375)
++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++....... ...
T Consensus 8 ~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~ 87 (267)
T 3r9t_A 8 APGALAERRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDH 87 (267)
T ss_dssp CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTC
T ss_pred CCcEEEEEECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHH
Confidence 56799999999999999999999999999999999999999999999999999999 6999999999986543211 110
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
.......+ .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|+
T Consensus 88 ~~~~~~~~-~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ 166 (267)
T 3r9t_A 88 PEWGFAGY-VRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLL 166 (267)
T ss_dssp GGGCGGGT-TTCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHHHHH
T ss_pred HhHHHHHH-HHHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHHHHH
Confidence 00000111 123899999999999999999999999999999999999999999999999999999999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||+|||++++.. .+.
T Consensus 167 ltg~~i~A~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------------- 197 (267)
T 3r9t_A 167 LTGEPLSAAAARDWGLINEVVEAGSVLD--AAL----------------------------------------------- 197 (267)
T ss_dssp HHCCCEEHHHHHHHTSSSEEECTTCHHH--HHH-----------------------------------------------
T ss_pred HcCCCCCHHHHHHCCCccEEcChhHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999998843 222
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHH---HHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRS---IREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~---l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+++++|++.||.+++.+|++ ++.....+++++++.|...+..++.++ |++||++||
T Consensus 198 ------------------~~a~~la~~~p~a~~~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~---d~~eg~~AF 256 (267)
T 3r9t_A 198 ------------------ALASAITVNAPLSVQASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSE---DAKEGPRAF 256 (267)
T ss_dssp ------------------HHHHHHHTSCHHHHHHHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSS---HHHHHHHHH
T ss_pred ------------------HHHHHHHhCChHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHH
Confidence 33789999999999999999 888888899999999999999999755 999999999
Q ss_pred hccCCCCCCCCCC
Q 017189 322 LLDKDKNPKWKPS 334 (375)
Q Consensus 322 l~ek~r~P~w~~~ 334 (375)
++| |+|+|+++
T Consensus 257 -~ek-R~P~f~g~ 267 (267)
T 3r9t_A 257 -AEK-REPVWQAR 267 (267)
T ss_dssp -HTT-SCCCCCCC
T ss_pred -HcC-CCCCCCCC
Confidence 599 89999864
|
| >3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-57 Score=424.08 Aligned_cols=251 Identities=20% Similarity=0.229 Sum_probs=205.3
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFS 87 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 87 (375)
+..|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......... .
T Consensus 10 m~~v~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~-~ 88 (262)
T 3r9q_A 10 QPAVRVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHP-H 88 (262)
T ss_dssp CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCT-T
T ss_pred CCEEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHH-h
Confidence 457999999999999999999999999999999999999999999999999999999999999999986533211000 0
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
....+...+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++|
T Consensus 89 ~~~~~~~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~lt 168 (262)
T 3r9q_A 89 GPGPMGPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLILT 168 (262)
T ss_dssp SSCTTSSTTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHHHHc
Confidence 1112333456899999999999999999999999999999999999999999999999999999999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||+|||++++.. ++.
T Consensus 169 G~~~~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------- 197 (262)
T 3r9q_A 169 GRPVHANEALDIGLVNRVVARGQARE--AAE------------------------------------------------- 197 (262)
T ss_dssp CCCEEHHHHHHTTSCSEEECTTCHHH--HHH-------------------------------------------------
T ss_pred CCcCCHHHHHHcCCccEecChhHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999998843 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKD 326 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~ 326 (375)
+++++|++.||.+++.+|++++.....+++++++.|.. +..++. + |++||++|| +||
T Consensus 198 ----------------~~a~~la~~~~~a~~~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~---s-d~~Eg~~AF-~ek- 254 (262)
T 3r9q_A 198 ----------------TLAAEIAAFPQQCVRADRDSAIAQWGMAEEAALDNEFG-SIERVA---T-EALEGAGRF-AAG- 254 (262)
T ss_dssp ----------------HHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHT-HHHHHH---C---------------
T ss_pred ----------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH-HHHHhc---c-HHHHHHHHH-HcC-
Confidence 33789999999999999999999999999999999999 877774 5 999999999 599
Q ss_pred CCCCCCC
Q 017189 327 KNPKWKP 333 (375)
Q Consensus 327 r~P~w~~ 333 (375)
|+|.|++
T Consensus 255 r~p~~~~ 261 (262)
T 3r9q_A 255 EGRHGAG 261 (262)
T ss_dssp -------
T ss_pred CCCCCCC
Confidence 8999975
|
| >3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-56 Score=417.04 Aligned_cols=253 Identities=19% Similarity=0.263 Sum_probs=217.7
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch---h
Q 017189 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE---G 82 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---~ 82 (375)
++++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.| ++|+|||||+|++||+|+|++++...... .
T Consensus 4 m~~~~i~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 82 (267)
T 3hp0_A 4 VTYQTIKVRFQASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRKQ 82 (267)
T ss_dssp -CCSSEEEEEETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCCS
T ss_pred CCCceEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHHH
Confidence 3467899999999999999999999999999999999999999986 69999999999999999999998654211 1
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
..+...++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++| .+++
T Consensus 83 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~A~ 161 (267)
T 3hp0_A 83 ASSQEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQKAH 161 (267)
T ss_dssp CCCCHHHHHHHHHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHHHH
Confidence 23345567788899999999999999999999999999999999999999999999999999886 678999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||+.++|+||+++||||+|||+.+. ...
T Consensus 162 ellltg~~i~A~eA~~~GLV~~vv~~~~~--~~~---------------------------------------------- 193 (267)
T 3hp0_A 162 YMTLMTKPISVQEASEWGLIDAFDAESDV--LLR---------------------------------------------- 193 (267)
T ss_dssp HHHHHCCCBCHHHHHHHTSSSCBCSCTTH--HHH----------------------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCcceecCCHHH--HHH----------------------------------------------
Confidence 99999999999999999999999986442 112
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.+++|++.||.+++.+|++++... ..+.++++.|.+.+..++.++ |++||++||
T Consensus 194 ---------------------~~a~~la~~~p~a~~~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~s~---d~~Eg~~AF 248 (267)
T 3hp0_A 194 ---------------------KHLLRLRRLNKKGIAHYKQFMSSLD-HQVSRAKATALTANQDMFSDP---QNQMGIIRY 248 (267)
T ss_dssp ---------------------HHHHHHTTSCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHTTST---THHHHHHHH
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHhcc-cchHHHHHHHHHHHHHHhCCH---HHHHHHHHH
Confidence 2268999999999999999999864 357888889999998888755 999999999
Q ss_pred hccCCCCCCCCCCC
Q 017189 322 LLDKDKNPKWKPSK 335 (375)
Q Consensus 322 l~ek~r~P~w~~~~ 335 (375)
+|| |+|+|.+..
T Consensus 249 -~ek-r~P~~~~~~ 260 (267)
T 3hp0_A 249 -VET-GQFPWEDQE 260 (267)
T ss_dssp -TTS-CCC------
T ss_pred -Hhc-CCCCCCCCC
Confidence 599 899998654
|
| >2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-56 Score=421.72 Aligned_cols=256 Identities=21% Similarity=0.277 Sum_probs=219.6
Q ss_pred CCCCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch---
Q 017189 6 SQEDQVLEEETSFVRILTLN-RPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE--- 81 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itln-rp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--- 81 (375)
.+++.|.++++++|++|||| ||++.|+||.+|+.+|.++|+.++.|+. |+|||||.|++||+|+|++++......
T Consensus 20 ~~~~~v~~~~~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~ 98 (291)
T 2fbm_A 20 STYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 98 (291)
T ss_dssp -CCSSEEEEECSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHH
T ss_pred CCcceEEEEEeCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccch
Confidence 45778999999999999999 7999999999999999999999999875 999999999999999999988542111
Q ss_pred --hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H
Q 017189 82 --GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F 158 (375)
Q Consensus 82 --~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~ 158 (375)
...+...+.+++.++..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~ 178 (291)
T 2fbm_A 99 TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKA 178 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhHH
Confidence 1233445667888899999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
++++|++||+.++|+||+++||||+|||++++.. +++
T Consensus 179 ~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l~~--~a~----------------------------------------- 215 (291)
T 2fbm_A 179 SANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQ--EVM----------------------------------------- 215 (291)
T ss_dssp HHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHH--HHH-----------------------------------------
T ss_pred HHHHHHHcCCccCHHHHHHCCCcceecChhHHHH--HHH-----------------------------------------
Confidence 7999999999999999999999999999988743 222
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhH
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGC 318 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv 318 (375)
+.+++|++.||.+++.+|++++.....+++++++.|...+..++.+ +|++||+
T Consensus 216 ------------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~eg~ 268 (291)
T 2fbm_A 216 ------------------------IQIKELASYNPIVLEECKALVRCNIKLELEQANERECEVLRKIWSS---AQGIESM 268 (291)
T ss_dssp ------------------------HHHHHHTTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTS---HHHHHHH
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHHhcC---HHHHHHH
Confidence 2378999999999999999999887778999999999999999965 4999999
Q ss_pred hhh-hccCCCCCCCCCC
Q 017189 319 RAI-LLDKDKNPKWKPS 334 (375)
Q Consensus 319 ~A~-l~ek~r~P~w~~~ 334 (375)
+|| + +| |+|+|+++
T Consensus 269 ~Af~~-ek-R~P~f~~~ 283 (291)
T 2fbm_A 269 LKIPL-LG-YKAAFPPR 283 (291)
T ss_dssp HTC--------------
T ss_pred HHHHh-cC-CCCCCCCC
Confidence 999 8 98 89999976
|
| >1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-56 Score=419.83 Aligned_cols=255 Identities=21% Similarity=0.291 Sum_probs=225.6
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEee-CC-CCccccCCchhHhhccchhhH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG-KG-RAFCAGGDVAAVVRGINEGAK 84 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg-~g-~~F~aG~Dl~~~~~~~~~~~~ 84 (375)
+|+.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+ +|+||||| .| ++||+|+|++++.........
T Consensus 2 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~~~ 80 (261)
T 1ef8_A 2 SYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDPLS 80 (261)
T ss_dssp CCSSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CTTC
T ss_pred CcceEEEEEeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchhHH
Confidence 3567999999999999999999999999999999999999999999 99999999 99 999999999987542211111
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+...+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+++++
T Consensus 81 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 160 (261)
T 1ef8_A 81 YDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKEL 160 (261)
T ss_dssp TTSHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 2234567788899999999999999999999999999999999999999999999999999999999999999 679999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
++||+.++|+||+++||||+|||++++.. .+.
T Consensus 161 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~---------------------------------------------- 192 (261)
T 1ef8_A 161 IFTASPITAQRALAVGILNHVVEVEELED--FTL---------------------------------------------- 192 (261)
T ss_dssp HHHCCCEEHHHHHHTTSCSEEECHHHHHH--HHH----------------------------------------------
T ss_pred HHcCCccCHHHHHHCCCcccccCHHHHHH--HHH----------------------------------------------
Confidence 99999999999999999999999877633 222
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHH--HHhhCCCcchHHhhHhhh
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVC--HVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~--~~~~~~~s~d~~egv~A~ 321 (375)
+.+++|+..||.+++.+|++++.....+++++++.|.+.+. .++.+ +|++||+++|
T Consensus 193 -------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s---~d~~eg~~af 250 (261)
T 1ef8_A 193 -------------------QMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDS---EDYQEGMNAF 250 (261)
T ss_dssp -------------------HHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTS---HHHHHHHHHH
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcC---HHHHHHHHHH
Confidence 23789999999999999999999888889999999999998 88865 5999999999
Q ss_pred hccCCCCCCCCCC
Q 017189 322 LLDKDKNPKWKPS 334 (375)
Q Consensus 322 l~ek~r~P~w~~~ 334 (375)
+ +| |+|+|+++
T Consensus 251 ~-ek-r~p~~~~~ 261 (261)
T 1ef8_A 251 L-EK-RKPNFVGH 261 (261)
T ss_dssp H-TT-SCCCCCCC
T ss_pred H-cc-CCCCCCCC
Confidence 5 99 89999863
|
| >3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-56 Score=420.19 Aligned_cols=252 Identities=24% Similarity=0.382 Sum_probs=217.4
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
+++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|.|++++......... .
T Consensus 13 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~-~ 91 (265)
T 3qxi_A 13 TEPEVLVEQRDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVE-G 91 (265)
T ss_dssp --CCEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEET-T
T ss_pred CCCeEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhh-h
Confidence 477899999999999999999999999999999999999999999999999999999999999999998654321100 0
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+ . +..+.. ||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++
T Consensus 92 ~~~-~-~~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~l 168 (265)
T 3qxi_A 92 RGL-G-FTERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELAL 168 (265)
T ss_dssp TEE-T-TTTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHHHHHH
T ss_pred hhh-h-HHHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHHHHHH
Confidence 000 0 223334 9999999999999999999999999999999999999999999999999999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.|+|+||+++||||+|||++++.. .+.
T Consensus 169 tg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------ 198 (265)
T 3qxi_A 169 TGDNLSAERAHALGMVNVLAEPGAALD--AAI------------------------------------------------ 198 (265)
T ss_dssp HCCCEEHHHHHHTTSCSEEECTTCHHH--HHH------------------------------------------------
T ss_pred cCCCcCHHHHHHCCCccEeeChhHHHH--HHH------------------------------------------------
Confidence 999999999999999999999988743 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+++++|++.||.+++.+|+++++....+++++++.|...+..++.++ |++||++|| ++|
T Consensus 199 -----------------~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~---d~~eg~~af-~ek 257 (265)
T 3qxi_A 199 -----------------ALAEKITANGPLAVAATKRIITESRGWSLDTRFAQQMKILFPIFTSN---DAKEGAIAF-AEK 257 (265)
T ss_dssp -----------------HHHHHHHTSCHHHHHHHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCH---HHHHHHHHH-HTT
T ss_pred -----------------HHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHH-HcC
Confidence 33789999999999999999999988899999999999999999765 999999999 599
Q ss_pred CCCCCCCCC
Q 017189 326 DKNPKWKPS 334 (375)
Q Consensus 326 ~r~P~w~~~ 334 (375)
|+|+|+++
T Consensus 258 -r~p~f~g~ 265 (265)
T 3qxi_A 258 -RPPRWTGT 265 (265)
T ss_dssp -SCCCCCCC
T ss_pred -CCCCCCCC
Confidence 89999864
|
| >3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=425.14 Aligned_cols=256 Identities=16% Similarity=0.168 Sum_probs=222.5
Q ss_pred CCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhcc
Q 017189 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGI 79 (375)
Q Consensus 1 M~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~ 79 (375)
|+....+++.|.++++++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++....
T Consensus 1 M~~~~~~~~~i~~~~~~~va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~ 79 (287)
T 3gkb_A 1 MSLRNDAYSTLRVSSEHGVARIILDNPP-VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMD 79 (287)
T ss_dssp ------CCSSEEEEEETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHH
T ss_pred CCCCCCCCCeEEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhcc
Confidence 6666667889999999999999999998 7999999999999999999999999999999999 8999999999886432
Q ss_pred ch-----h-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeC-CeEEeccccccCCCCCccHHHHH
Q 017189 80 NE-----G-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATE-NSVFAMPETALGLFPDIGASYFL 152 (375)
Q Consensus 80 ~~-----~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~-~a~f~~pe~~~G~~p~~g~~~~l 152 (375)
.. . ..+...++.++.++.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L 159 (287)
T 3gkb_A 80 ALQELAASAPADVNVFQAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYL 159 (287)
T ss_dssp HHHHHHHTSCTTCCTTHHHHHHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHH
Confidence 10 0 11223456788899999999999999999999999999999999999 99999999999999999999999
Q ss_pred hhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHH
Q 017189 153 SRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMD 231 (375)
Q Consensus 153 ~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (375)
+|++| .++++|++||++|+|+||+++||||+|||++++.....
T Consensus 160 ~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~------------------------------------ 203 (287)
T 3gkb_A 160 RGRVGRNRALEVVLTADLFDAETAASYGWINRALPADELDEYVD------------------------------------ 203 (287)
T ss_dssp HHHHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHH------------------------------------
T ss_pred HHHhCHHHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHH------------------------------------
Confidence 99999 67999999999999999999999999999887743222
Q ss_pred HHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCc
Q 017189 232 VIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVS 311 (375)
Q Consensus 232 ~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s 311 (375)
+++++|++.||.+++.+|++++.. .+.++++.|...+..++.+
T Consensus 204 -------------------------------~lA~~la~~~p~a~~~~K~~l~~~---~~~~~l~~e~~~~~~~~~s--- 246 (287)
T 3gkb_A 204 -------------------------------RVARNIAALPDGVIEAAKRSLPAD---DLKEGLLGENDAWAATFSL--- 246 (287)
T ss_dssp -------------------------------HHHHHHHTSCTTHHHHHHHHSCCC---CCHHHHHHHHHHHHHHHTS---
T ss_pred -------------------------------HHHHHHHcCCHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHhCC---
Confidence 337899999999999999999874 3469999999999999965
Q ss_pred chHHhhHhhhhccCCCC--CCCC
Q 017189 312 KDFFEGCRAILLDKDKN--PKWK 332 (375)
Q Consensus 312 ~d~~egv~A~l~ek~r~--P~w~ 332 (375)
+|++||++||+ +| |+ |+|+
T Consensus 247 ~d~~eg~~AF~-ek-r~~~P~f~ 267 (287)
T 3gkb_A 247 PAAQQLISGGL-KD-GAQTPAGE 267 (287)
T ss_dssp HHHHHHHHHHH-HT-TTTSHHHH
T ss_pred HHHHHHHHHHH-hc-CCCCCchh
Confidence 49999999995 88 45 9998
|
| >1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-56 Score=415.65 Aligned_cols=255 Identities=24% Similarity=0.391 Sum_probs=225.9
Q ss_pred CCCcEEEEE---eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhh
Q 017189 7 QEDQVLEEE---TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGA 83 (375)
Q Consensus 7 ~~~~v~~~~---~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 83 (375)
+++.+.++. .++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... .
T Consensus 2 ~~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~ 80 (260)
T 1mj3_A 2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQ-D 80 (260)
T ss_dssp CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHH-H
T ss_pred CcccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccch-H
Confidence 466788888 889999999999999999999999999999999999999999999999999999999987542211 1
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.+...+...+.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++
T Consensus 81 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 160 (260)
T 1mj3_A 81 CYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAME 160 (260)
T ss_dssp HHHC--CCGGGGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 12222223356778999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 161 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~--------------------------------------------- 193 (260)
T 1mj3_A 161 MVLTGDRISAQDAKQAGLVSKIFPVETLVE--EAI--------------------------------------------- 193 (260)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECTTTHHH--HHH---------------------------------------------
T ss_pred HHHcCCcCCHHHHHHcCCccEEeChHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999988743 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.+++|+..||.+++.+|++++.....+++++++.|...+..++.++ |++||+++|+
T Consensus 194 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~---d~~egi~af~ 250 (260)
T 1mj3_A 194 --------------------QCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATD---DRREGMSAFV 250 (260)
T ss_dssp --------------------HHHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSH---HHHHHHHHHH
T ss_pred --------------------HHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHH
Confidence 33789999999999999999999988899999999999999999754 9999999995
Q ss_pred ccCCCCCCCCCC
Q 017189 323 LDKDKNPKWKPS 334 (375)
Q Consensus 323 ~ek~r~P~w~~~ 334 (375)
+| |+|+|+++
T Consensus 251 -~k-r~p~~~g~ 260 (260)
T 1mj3_A 251 -EK-RKANFKDH 260 (260)
T ss_dssp -TT-SCCCCCCC
T ss_pred -cC-CCCCCCCC
Confidence 99 89999863
|
| >1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-55 Score=409.89 Aligned_cols=247 Identities=28% Similarity=0.394 Sum_probs=222.2
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhc---cch-hhHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG---INE-GAKFF 86 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~-~~~~~ 86 (375)
|.++ +++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++... ... .....
T Consensus 2 i~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 80 (253)
T 1uiy_A 2 VQVE-KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHS 80 (253)
T ss_dssp EEEE-CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHH
T ss_pred EEEE-eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHHH
Confidence 6778 899999999999999999999999999999999999999999999999999999999988653 111 11111
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++| .+++++++
T Consensus 81 ~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l~l 159 (253)
T 1uiy_A 81 LSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDLLL 159 (253)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHHHH
Confidence 1256788899999999999999999999999999999999999999999999999999999 999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.++|+||+++||||+|||++++.. .+.
T Consensus 160 tg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------ 189 (253)
T 1uiy_A 160 TGRLVEAREAKALGLVNRIAPPGKALE--EAK------------------------------------------------ 189 (253)
T ss_dssp HCCEEEHHHHHHHTSCSEEECTTCHHH--HHH------------------------------------------------
T ss_pred hCCccCHHHHHHCCCcceecChhHHHH--HHH------------------------------------------------
Confidence 999999999999999999999988743 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.+++|++.||.+++.+|++++.....+++++++.|.+.+..++.++ |++||+++|+ +|
T Consensus 190 -----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~---d~~eg~~af~-~k 248 (253)
T 1uiy_A 190 -----------------ALAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVRETG---DLAEGIRAFF-EK 248 (253)
T ss_dssp -----------------HHHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCH---HHHHHHHHHH-TT
T ss_pred -----------------HHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHh-Cc
Confidence 22689999999999999999999988899999999999999998754 9999999995 98
Q ss_pred CCCCCC
Q 017189 326 DKNPKW 331 (375)
Q Consensus 326 ~r~P~w 331 (375)
|+|+|
T Consensus 249 -r~p~~ 253 (253)
T 1uiy_A 249 -RPPRF 253 (253)
T ss_dssp -SCCCC
T ss_pred -CCCCC
Confidence 89998
|
| >1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-55 Score=413.17 Aligned_cols=250 Identities=18% Similarity=0.258 Sum_probs=225.8
Q ss_pred CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhc-c-c-hh-
Q 017189 8 EDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG-I-N-EG- 82 (375)
Q Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~-~-~~- 82 (375)
++.|.+++ +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++ +... . . +.
T Consensus 9 ~~~v~~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~ 86 (264)
T 1wz8_A 9 YPGLAFAWPRPGVLEITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEAL 86 (264)
T ss_dssp CTTEEEEEEETTEEEEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHH
T ss_pred CCeEEEEEccCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHH
Confidence 56799999 9999999999999 99999999999999999999999999999999999999999999 7542 1 1 11
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
..+...+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+++
T Consensus 87 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 166 (264)
T 1wz8_A 87 LRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAK 166 (264)
T ss_dssp HHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHH
Confidence 234456678888999999999999999999999999999999999999999999999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 167 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~-------------------------------------------- 200 (264)
T 1wz8_A 167 YHLLLNEPLTGEEAERLGLVALAVEDEKVYE--KAL-------------------------------------------- 200 (264)
T ss_dssp HHHHHTCCEEHHHHHHHTSSSEEECGGGHHH--HHH--------------------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCceeecChhHHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999988743 222
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.+++|++.||.+++.+|++++..... ++++++.|...+..++.++ |++||+++|
T Consensus 201 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~---d~~eg~~af 255 (264)
T 1wz8_A 201 ---------------------EVAERLAQGPKEALHHTKHALNHWYRS-FLPHFELSLALEFLGFSGK---ELEEGLKAL 255 (264)
T ss_dssp ---------------------HHHHHHHTSCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHGGGSH---HHHHHHHHH
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCh---HHHHHHHHH
Confidence 237899999999999999999998877 9999999999999998754 999999999
Q ss_pred hccCCCCCCCC
Q 017189 322 LLDKDKNPKWK 332 (375)
Q Consensus 322 l~ek~r~P~w~ 332 (375)
+ +| |+|+|+
T Consensus 256 ~-ek-r~p~f~ 264 (264)
T 1wz8_A 256 K-EK-RPPEFP 264 (264)
T ss_dssp H-TT-SCCCCC
T ss_pred H-cc-CCCCCC
Confidence 5 99 899995
|
| >2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-55 Score=414.27 Aligned_cols=252 Identities=19% Similarity=0.268 Sum_probs=225.5
Q ss_pred CCCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch----
Q 017189 7 QEDQVLEEETSFVRILTLN-RPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE---- 81 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itln-rp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---- 81 (375)
+++.|.++++++|++|||| ||++.|+||.+|+.+|.++++.++.|+ +|+|||||.|++||+|+|++++......
T Consensus 3 ~~~~i~~~~~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~ 81 (261)
T 2gtr_A 3 RYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKR 81 (261)
T ss_dssp CCSSEEEEEETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHH
T ss_pred ccceEEEEEeCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhh
Confidence 5678999999999999999 699999999999999999999999987 4999999999999999999987542111
Q ss_pred -hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HH
Q 017189 82 -GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FF 159 (375)
Q Consensus 82 -~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~ 159 (375)
...+...+.+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 161 (261)
T 2gtr_A 82 ESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGAS 161 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHHH
Confidence 1233445667888899999999999999999999999999999999999999999999999999999999999999 67
Q ss_pred HHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCc
Q 017189 160 GEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSR 239 (375)
Q Consensus 160 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~ 239 (375)
+++|++||+.++|+||+++||||+|||++++.. ++.
T Consensus 162 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------ 197 (261)
T 2gtr_A 162 ANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQ--EVM------------------------------------------ 197 (261)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHH--HHH------------------------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCcccccChhHHHH--HHH------------------------------------------
Confidence 999999999999999999999999999988743 222
Q ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 240 RTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 240 ~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+.+++|++.||.+++.+|++++.....+++++++.|...+..++.++ |++||++
T Consensus 198 -----------------------~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~---d~~eg~~ 251 (261)
T 2gtr_A 198 -----------------------VRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSA---QGMDSML 251 (261)
T ss_dssp -----------------------HHHHHHHTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHST---TTTHHHH
T ss_pred -----------------------HHHHHHHhCCHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHhCCH---HHHHHHH
Confidence 23789999999999999999998877789999999999999999765 9999999
Q ss_pred hhhccCCCCCCC
Q 017189 320 AILLDKDKNPKW 331 (375)
Q Consensus 320 A~l~ek~r~P~w 331 (375)
||+ +| |+|+|
T Consensus 252 af~-ek-r~P~f 261 (261)
T 2gtr_A 252 KYL-QR-KIDEF 261 (261)
T ss_dssp HHH-HH-HHHC-
T ss_pred HHH-cc-CCCCC
Confidence 995 99 88998
|
| >4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-55 Score=416.33 Aligned_cols=257 Identities=21% Similarity=0.308 Sum_probs=218.2
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEee-----CC-CCccccCCchhHhhccc
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG-----KG-RAFCAGGDVAAVVRGIN 80 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg-----~g-~~F~aG~Dl~~~~~~~~ 80 (375)
+++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+||||| +| ++||+|+|++++.....
T Consensus 8 ~~~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~ 87 (275)
T 4eml_A 8 HYDDILYYKAGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGY 87 (275)
T ss_dssp ECSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC-------
T ss_pred CCceEEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccc
Confidence 4678999999999999999999999999999999999999999999999999999 89 69999999998864221
Q ss_pred hh--hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-
Q 017189 81 EG--AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG- 157 (375)
Q Consensus 81 ~~--~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g- 157 (375)
.. .........++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 88 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG~ 167 (275)
T 4eml_A 88 IDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVGQ 167 (275)
T ss_dssp -------CCCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCH
T ss_pred cchhhHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhHH
Confidence 11 111112456788899999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHh
Q 017189 158 FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCF 237 (375)
Q Consensus 158 ~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f 237 (375)
.++++|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 168 ~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~--~a~---------------------------------------- 205 (275)
T 4eml_A 168 KKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEE--EGI---------------------------------------- 205 (275)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHH--HHH----------------------------------------
T ss_pred HHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHH--HHH----------------------------------------
Confidence 67999999999999999999999999999988743 222
Q ss_pred CcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhh
Q 017189 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEG 317 (375)
Q Consensus 238 ~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 317 (375)
+.+++|++.||.+++.+|+++++... ......+.|.+.+..++.+ +|++||
T Consensus 206 -------------------------~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~~~~~~~~~~~s---~d~~eg 256 (275)
T 4eml_A 206 -------------------------QWAKEILSKSPLAIRCLKAAFNADCD-GQAGLQELAGNATLLYYMT---EEGSEG 256 (275)
T ss_dssp -------------------------HHHHHHHTSCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTS---HHHHHH
T ss_pred -------------------------HHHHHHHhCCHHHHHHHHHHHHhhhc-cchhHHHHHHHHHHHHhcC---HHHHHH
Confidence 33789999999999999999998754 2344455677777777754 599999
Q ss_pred HhhhhccCCCCCCCCCCCc
Q 017189 318 CRAILLDKDKNPKWKPSKL 336 (375)
Q Consensus 318 v~A~l~ek~r~P~w~~~~~ 336 (375)
++|| +|| |+|+|++.+.
T Consensus 257 ~~AF-~ek-R~p~f~~~~~ 273 (275)
T 4eml_A 257 KQAF-LEK-RPPDFSQYPW 273 (275)
T ss_dssp HHHH-HTT-SCCCCTTCCC
T ss_pred HHHH-HcC-CCCCCCCCCC
Confidence 9999 599 8999998653
|
| >3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-55 Score=412.39 Aligned_cols=250 Identities=24% Similarity=0.315 Sum_probs=219.8
Q ss_pred CcEEEE----EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch-h-
Q 017189 9 DQVLEE----ETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE-G- 82 (375)
Q Consensus 9 ~~v~~~----~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~- 82 (375)
+.|.++ .+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...... .
T Consensus 7 ~~v~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 86 (267)
T 3oc7_A 7 ALVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSSA 86 (267)
T ss_dssp SSEEEECHHHHSSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------CH
T ss_pred cccCCCCccceeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchhh
Confidence 578888 8999999999999999999999999999999999999999999999999999999999998621111 1
Q ss_pred ----hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-
Q 017189 83 ----AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG- 157 (375)
Q Consensus 83 ----~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g- 157 (375)
..+...+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+ ++|
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG~ 165 (267)
T 3oc7_A 87 YDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLSA 165 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSCH
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhCH
Confidence 13566677889999999999999999999999999999999999999999999999999999999999999 788
Q ss_pred HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHh
Q 017189 158 FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCF 237 (375)
Q Consensus 158 ~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f 237 (375)
.+++++++||+.++|+||+++||||+| ++++.. .+.
T Consensus 166 ~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~~l~~--~a~---------------------------------------- 201 (267)
T 3oc7_A 166 RAAARYYLTGEKFDARRAEEIGLITMA--AEDLDA--AID---------------------------------------- 201 (267)
T ss_dssp HHHHHHHHHCCCBCHHHHHHHTSSSEE--CSSHHH--HHH----------------------------------------
T ss_pred HHHHHHHHcCCccCHHHHHHCCChhhh--hHHHHH--HHH----------------------------------------
Confidence 679999999999999999999999999 566633 222
Q ss_pred CcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhh
Q 017189 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEG 317 (375)
Q Consensus 238 ~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 317 (375)
+++++|++.||.+++.+|+++++....+++++++.|...+..++.+ +|++||
T Consensus 202 -------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s---~d~~eg 253 (267)
T 3oc7_A 202 -------------------------QLVTDVGRGSPQGLAASKALTTAAVLERFDRDAERLAEESARLFVS---DEAREG 253 (267)
T ss_dssp -------------------------HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---HHHHHH
T ss_pred -------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcC---HHHHHH
Confidence 3378999999999999999999988888999999999999999975 499999
Q ss_pred HhhhhccCCCCCCCCC
Q 017189 318 CRAILLDKDKNPKWKP 333 (375)
Q Consensus 318 v~A~l~ek~r~P~w~~ 333 (375)
++||+ +| |+|+|+.
T Consensus 254 ~~af~-ek-r~p~f~~ 267 (267)
T 3oc7_A 254 MLAFL-EK-RSPNWTS 267 (267)
T ss_dssp HHHHH-HT-CCCTTC-
T ss_pred HHHHH-cC-CCCCCCC
Confidence 99995 99 8999973
|
| >3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-56 Score=414.65 Aligned_cols=248 Identities=23% Similarity=0.290 Sum_probs=189.1
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--hH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--AK 84 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--~~ 84 (375)
++..|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..
T Consensus 4 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (256)
T 3qmj_A 4 SMVTLQIDDDNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSE 83 (256)
T ss_dssp --CCEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCC
T ss_pred CcceEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHH
Confidence 4668999999999999999999999999999999999999999999999999999999999999999986532211 12
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYV 163 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l 163 (375)
+...++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|
T Consensus 84 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l 163 (256)
T 3qmj_A 84 GKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWL 163 (256)
T ss_dssp CSSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHHH
Confidence 2344567888999999999999999999999999999999999999999999999999999999999999999 679999
Q ss_pred hhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHH
Q 017189 164 GLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVE 243 (375)
Q Consensus 164 ~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ 243 (375)
++||+.++|+||+++||||+|||++++.. .+.
T Consensus 164 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~---------------------------------------------- 195 (256)
T 3qmj_A 164 LMSSEWIDAEEALRMGLVWRICSPEELLP--EAR---------------------------------------------- 195 (256)
T ss_dssp HHSCCCEEHHHHHHHTSSSEEECGGGHHH--HHH----------------------------------------------
T ss_pred HHcCCCCCHHHHHHCCCccEEeCHhHHHH--HHH----------------------------------------------
Confidence 99999999999999999999999988743 222
Q ss_pred HHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhc
Q 017189 244 EILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILL 323 (375)
Q Consensus 244 ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ 323 (375)
+++++|+..||.+++.+|++++.....+++++++.|...+..++.++ |++||++|| +
T Consensus 196 -------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~---d~~eg~~af-~ 252 (256)
T 3qmj_A 196 -------------------RHAEILAAKPISSLMAVKHTMVEPNRAQIAAASARENAHFAELMGAQ---ANAAALADF-T 252 (256)
T ss_dssp -------------------HHHHHHHTSCHHHHHHHHHHHHCC-------------------------------------
T ss_pred -------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHH-H
Confidence 23789999999999999999999888899999999999999999755 999999999 5
Q ss_pred cC
Q 017189 324 DK 325 (375)
Q Consensus 324 ek 325 (375)
||
T Consensus 253 ek 254 (256)
T 3qmj_A 253 DR 254 (256)
T ss_dssp --
T ss_pred cc
Confidence 88
|
| >3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-55 Score=416.04 Aligned_cols=257 Identities=20% Similarity=0.298 Sum_probs=218.0
Q ss_pred CCCCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccch--
Q 017189 6 SQEDQVLEEET-SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINE-- 81 (375)
Q Consensus 6 ~~~~~v~~~~~-~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~-- 81 (375)
+.++.|.++++ ++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 24 ~~~~~v~~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 103 (289)
T 3t89_A 24 EGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKD 103 (289)
T ss_dssp TTCSSEEEEEETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC----------
T ss_pred CCCCeEEEEEecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccchh
Confidence 45778999999 99999999999999999999999999999999999999999999999 699999999987542211
Q ss_pred h-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HH
Q 017189 82 G-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FF 159 (375)
Q Consensus 82 ~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~ 159 (375)
. ..+......++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+
T Consensus 104 ~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~~~ 183 (289)
T 3t89_A 104 DSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKK 183 (289)
T ss_dssp ------CTHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHHH
T ss_pred hhHHHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCHHH
Confidence 1 112223456788899999999999999999999999999999999999999999999998888888999999999 67
Q ss_pred HHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCc
Q 017189 160 GEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSR 239 (375)
Q Consensus 160 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~ 239 (375)
+++|++||+.|+|+||+++||||+|||++++.. .+.
T Consensus 184 A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~--~a~------------------------------------------ 219 (289)
T 3t89_A 184 AREIWFLCRQYDAKQALDMGLVNTVVPLADLEK--ETV------------------------------------------ 219 (289)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHH--HHH------------------------------------------
T ss_pred HHHHHHcCCcccHHHHHHCCCceEeeCHHHHHH--HHH------------------------------------------
Confidence 999999999999999999999999999988743 222
Q ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 240 RTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 240 ~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+++++|+..||.+++.+|++++.... ...+..+.|...+..++.+ +|++||++
T Consensus 220 -----------------------~~A~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s---~d~~Eg~~ 272 (289)
T 3t89_A 220 -----------------------RWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFYMT---EEGQEGRN 272 (289)
T ss_dssp -----------------------HHHHHHHTSCHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHTTS---STTTHHHH
T ss_pred -----------------------HHHHHHHcCCHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence 33789999999999999999998754 2344445677777777764 59999999
Q ss_pred hhhccCCCCCCCCCCC
Q 017189 320 AILLDKDKNPKWKPSK 335 (375)
Q Consensus 320 A~l~ek~r~P~w~~~~ 335 (375)
|| +|| |+|+|++..
T Consensus 273 AF-~ek-R~P~f~~~~ 286 (289)
T 3t89_A 273 AF-NQK-RQPDFSKFK 286 (289)
T ss_dssp HH-HTT-SCCCCTTSC
T ss_pred HH-hcC-CCCCCCCCC
Confidence 99 599 899999764
|
| >1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-55 Score=414.81 Aligned_cols=258 Identities=23% Similarity=0.357 Sum_probs=227.3
Q ss_pred CcEEEEE----eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-
Q 017189 9 DQVLEEE----TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG- 82 (375)
Q Consensus 9 ~~v~~~~----~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~- 82 (375)
..+.+++ +++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||+| ++||+|+|++++.......
T Consensus 8 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~ 87 (272)
T 1hzd_A 8 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEV 87 (272)
T ss_dssp CSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHH
T ss_pred CcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccChHHH
Confidence 3466654 689999999999999999999999999999999999999999999998 7999999999875432211
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
..+...+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+++
T Consensus 88 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~ 167 (272)
T 1hzd_A 88 GPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAK 167 (272)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHHHH
Confidence 344456678888999999999999999999999999999999999999999999999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||+.++|+||+++||||+|||++++.. ..+
T Consensus 168 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~~~-------------------------------------------- 201 (272)
T 1hzd_A 168 ELIFSARVLDGKEAKAVGLISHVLEQNQEGD--AAY-------------------------------------------- 201 (272)
T ss_dssp HHHHHTCEEEHHHHHHHTSCSEEECCCTTSC--HHH--------------------------------------------
T ss_pred HHHHcCCcCCHHHHHHCCCcceecChhhhhH--HHH--------------------------------------------
Confidence 9999999999999999999999999987621 111
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.+.+++++|+..||.+++.+|++++.....++.++++.|...+..++.+ +|++||+++|
T Consensus 202 -----------------~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s---~d~~egi~af 261 (272)
T 1hzd_A 202 -----------------RKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPT---KDRLEGLLAF 261 (272)
T ss_dssp -----------------HHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTC---HHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH
Confidence 11224468889999999999999999988889999999999999888865 5999999999
Q ss_pred hccCCCCCCCCCC
Q 017189 322 LLDKDKNPKWKPS 334 (375)
Q Consensus 322 l~ek~r~P~w~~~ 334 (375)
++| |+|+|+++
T Consensus 262 -~ek-r~p~~~g~ 272 (272)
T 1hzd_A 262 -KEK-RPPRYKGE 272 (272)
T ss_dssp -TTT-SCCCCCCC
T ss_pred -hcC-CCCCCCCC
Confidence 498 89999863
|
| >2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-55 Score=414.46 Aligned_cols=255 Identities=23% Similarity=0.345 Sum_probs=220.7
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCC-CccccCCchhHhhccchh-hH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR-AFCAGGDVAAVVRGINEG-AK 84 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~-~F~aG~Dl~~~~~~~~~~-~~ 84 (375)
+++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|+ +||+|+|++++....... ..
T Consensus 11 ~~~~i~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~ 90 (273)
T 2uzf_A 11 EYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQ 90 (273)
T ss_dssp CCSSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------CCSS
T ss_pred CCceEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccchhhh
Confidence 4667999999999999999999999999999999999999999999999999999997 999999999875421110 00
Q ss_pred H-HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 85 F-FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 85 ~-~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
+ ...++.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++
T Consensus 91 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A~~ 170 (273)
T 2uzf_A 91 IPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKARE 170 (273)
T ss_dssp SCCCTHHHHHHHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHHHH
T ss_pred HHHhhHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHHHH
Confidence 0 011346777889999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||+.++|+||+++||||+|||++++.. .++
T Consensus 171 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~--------------------------------------------- 203 (273)
T 2uzf_A 171 IWYLCRQYNAQEALDMGLVNTVVPLEKVED--ETV--------------------------------------------- 203 (273)
T ss_dssp HHHTCCCEEHHHHHHHTSSSEEECGGGSHH--HHH---------------------------------------------
T ss_pred HHHhCCCCCHHHHHHcCCCccccCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999988743 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHH-HHHHHHhhCCCcchHHhhHhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREY-RMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~-~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.+++|++.||.+++.+|++++ ...++.++++.|. ..+..++.+ +|++||++||
T Consensus 204 --------------------~~a~~la~~~~~a~~~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~s---~d~~egi~af 258 (273)
T 2uzf_A 204 --------------------QWCKEIMKHSPTALRFLKAAMN--ADTDGLAGLQQMAGDATLLYYTT---DEAKEGRDAF 258 (273)
T ss_dssp --------------------HHHHHHTTSCHHHHHHHHHHHH--HHHSHHHHHHHHHHHHHHHHHTS---HHHHHHHHHH
T ss_pred --------------------HHHHHHHhCCHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHhcC---hHHHHHHHHH
Confidence 2268899999999999999998 3457889999998 888888865 5999999999
Q ss_pred hccCCCCCCCCCCC
Q 017189 322 LLDKDKNPKWKPSK 335 (375)
Q Consensus 322 l~ek~r~P~w~~~~ 335 (375)
+ +| |+|+|+++.
T Consensus 259 ~-ek-r~p~f~~~~ 270 (273)
T 2uzf_A 259 K-EK-RDPDFDQFP 270 (273)
T ss_dssp H-TT-SCCCCSSSC
T ss_pred H-hc-CCCCCCCCC
Confidence 4 99 899999763
|
| >3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-55 Score=411.17 Aligned_cols=244 Identities=23% Similarity=0.310 Sum_probs=222.3
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh---hHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---AKF 85 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---~~~ 85 (375)
..|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..+
T Consensus 28 ~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 107 (276)
T 3rrv_A 28 TEIDVRADGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAKT 107 (276)
T ss_dssp TTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHHH
T ss_pred CeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999999999999986532211 345
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 86 FSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 86 ~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
...++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|+
T Consensus 108 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ell 187 (276)
T 3rrv_A 108 IRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYA 187 (276)
T ss_dssp HHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHHHH
Confidence 566778899999999999999999999999999999999999999999999999999999999999999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||+|| +++.. .+.
T Consensus 188 ltG~~i~A~eA~~~GLv~~vv--~~l~~--~a~----------------------------------------------- 216 (276)
T 3rrv_A 188 LTGTRISAQRAVELGLANHVA--DDPVA--EAI----------------------------------------------- 216 (276)
T ss_dssp HHCCCEEHHHHHHHTSCSEEE--SSHHH--HHH-----------------------------------------------
T ss_pred HcCCCCCHHHHHHcCCHHHHH--HHHHH--HHH-----------------------------------------------
Confidence 999999999999999999999 66633 222
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+.+++|+..||.+++.+|+++++....+++++++.|...+..++.+ +|++||++|| +|
T Consensus 217 ------------------~~A~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~eg~~AF-~e 274 (276)
T 3rrv_A 217 ------------------ACAKKILELPQQAVESTKRVLNIHLERAVLASLDYALSAESQSFVT---EDFRSIVTKL-AD 274 (276)
T ss_dssp ------------------HHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS---HHHHHHHHHH-HC
T ss_pred ------------------HHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-Hc
Confidence 3378999999999999999999988888999999999999998865 5999999999 48
Q ss_pred C
Q 017189 325 K 325 (375)
Q Consensus 325 k 325 (375)
|
T Consensus 275 k 275 (276)
T 3rrv_A 275 K 275 (276)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-56 Score=417.61 Aligned_cols=252 Identities=23% Similarity=0.298 Sum_probs=197.2
Q ss_pred CCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc
Q 017189 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN 80 (375)
Q Consensus 1 M~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 80 (375)
|+..+.+++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++.....
T Consensus 4 m~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 83 (258)
T 3lao_A 4 MSEANSGPGRVTREQRGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLA 83 (258)
T ss_dssp -CCSCCSSCCEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCB
T ss_pred ccccCCCCCeEEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccc
Confidence 66667778899999999999999999999999999999999999999999999999999999988999999999876433
Q ss_pred hh-hHHHHHHHHHHHHH-HhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-
Q 017189 81 EG-AKFFSKEFILNYLM-ATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG- 157 (375)
Q Consensus 81 ~~-~~~~~~~~~l~~~i-~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g- 157 (375)
.. ..+...+++++.++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~ 163 (258)
T 3lao_A 84 ASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGW 163 (258)
T ss_dssp TTBCCCCTTCCCTTSCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCH
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCH
Confidence 21 12222233455677 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHh
Q 017189 158 FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCF 237 (375)
Q Consensus 158 ~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f 237 (375)
.++++|++||++++|+||+++||||+|||++++.. +++
T Consensus 164 ~~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~---------------------------------------- 201 (258)
T 3lao_A 164 TDAMRYILTGDEFDADEALRMRLLTEVVEPGEELA--RAL---------------------------------------- 201 (258)
T ss_dssp HHHHHHHTTCCCEEHHHHHHTTSCSEEECTTCHHH--HHH----------------------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHcCCCcEeeChhHHHH--HHH----------------------------------------
Confidence 67999999999999999999999999999988743 332
Q ss_pred CcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhh
Q 017189 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEG 317 (375)
Q Consensus 238 ~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 317 (375)
+++++|++.||.+++.+|+++++....+++++++.|...+..++.++ |++||
T Consensus 202 -------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~---d~~eg 253 (258)
T 3lao_A 202 -------------------------EYAERIARAAPLAVRAALQSAFQGRDEGDDAALSRVNESLAALIGSE---DVREG 253 (258)
T ss_dssp -------------------------HHHHHHHHSCHHHHHHHHHHHHHHTC-----------------------------
T ss_pred -------------------------HHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCH---HHHHH
Confidence 23789999999999999999999988899999999999999999755 99999
Q ss_pred Hhhhh
Q 017189 318 CRAIL 322 (375)
Q Consensus 318 v~A~l 322 (375)
++||+
T Consensus 254 ~~AF~ 258 (258)
T 3lao_A 254 VLAMV 258 (258)
T ss_dssp -----
T ss_pred HHhhC
Confidence 99984
|
| >3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-55 Score=412.93 Aligned_cols=249 Identities=24% Similarity=0.339 Sum_probs=203.5
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
+++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++...
T Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~-------- 78 (256)
T 3pe8_A 7 DSPVLLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDT-------- 78 (256)
T ss_dssp -CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-----------
T ss_pred CCCcEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhh--------
Confidence 356799999999999999999999999999999999999999999999999999999999999999987543
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..+..+...+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++
T Consensus 79 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~l 158 (256)
T 3pe8_A 79 TELPDISPKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSL 158 (256)
T ss_dssp ------CCCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHHHHH
Confidence 11223345678999999999999999999999999999999999999999999999999999999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.++|+||+++||||+|||++++.....
T Consensus 159 tg~~~~a~eA~~~GLv~~vv~~~~l~~~a~-------------------------------------------------- 188 (256)
T 3pe8_A 159 TGDYLSAQDALRAGLVTEVVAHDDLLTAAR-------------------------------------------------- 188 (256)
T ss_dssp HCCCEEHHHHHHHTSCSCEECGGGHHHHHH--------------------------------------------------
T ss_pred cCCCCCHHHHHHCCCCeEEeCHhHHHHHHH--------------------------------------------------
Confidence 999999999999999999999988743222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.+++|+..||.+++.+|++++.....+++++++.|...+...+....++|++|++.+| ++|
T Consensus 189 -----------------~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~af-lek 250 (256)
T 3pe8_A 189 -----------------RVAASIVGNNQKAVRALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASV-IER 250 (256)
T ss_dssp -----------------HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------------
T ss_pred -----------------HHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHH-Hhc
Confidence 23789999999999999999999988899999999999988776555577999999999 599
Q ss_pred CCCCCCC
Q 017189 326 DKNPKWK 332 (375)
Q Consensus 326 ~r~P~w~ 332 (375)
++|.|.
T Consensus 251 -~k~~~~ 256 (256)
T 3pe8_A 251 -GRSQVR 256 (256)
T ss_dssp -------
T ss_pred -cCccCC
Confidence 899994
|
| >3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-55 Score=424.75 Aligned_cols=256 Identities=20% Similarity=0.282 Sum_probs=189.7
Q ss_pred CCCcEEEEEe--CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCC-------CccccCCchhHhh
Q 017189 7 QEDQVLEEET--SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR-------AFCAGGDVAAVVR 77 (375)
Q Consensus 7 ~~~~v~~~~~--~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~-------~F~aG~Dl~~~~~ 77 (375)
+++.|.+++. ++|++||||||+++|+||.+|+.+|.++|+.++.|++||+|||||+|+ +||+|+|++++..
T Consensus 53 ~~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~ 132 (334)
T 3t8b_A 53 DLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGR 132 (334)
T ss_dssp TCSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC-
T ss_pred CCceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhc
Confidence 4678999987 999999999999999999999999999999999999999999999995 8999999998643
Q ss_pred ccc----h-------h-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEe-CCeEEeccccccCCCC
Q 017189 78 GIN----E-------G-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT-ENSVFAMPETALGLFP 144 (375)
Q Consensus 78 ~~~----~-------~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~-~~a~f~~pe~~~G~~p 144 (375)
... . . ..+...+..++..|..+||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p 212 (334)
T 3t8b_A 133 SGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFD 212 (334)
T ss_dssp ---------------------CCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSS
T ss_pred ccccccccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCC
Confidence 211 0 0 1111234567788999999999999999999999999999999999 9999999999999999
Q ss_pred CccHHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCc
Q 017189 145 DIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKD 223 (375)
Q Consensus 145 ~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (375)
++|++++|+|++| .++++|++||+.|+|+||+++||||+|||++++.. +++
T Consensus 213 ~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~--~a~-------------------------- 264 (334)
T 3t8b_A 213 GGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELET--VGL-------------------------- 264 (334)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHH--HHH--------------------------
T ss_pred cccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHH--HHH--------------------------
Confidence 9999999999999 67999999999999999999999999999988743 332
Q ss_pred chhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHH
Q 017189 224 HSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVC 303 (375)
Q Consensus 224 ~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~ 303 (375)
+.+++|+.+||.+++.+|++++.... .+.+.+..|...+.
T Consensus 265 ---------------------------------------~~A~~ia~~~p~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~ 304 (334)
T 3t8b_A 265 ---------------------------------------QWAAEINAKSPQAQRMLKFAFNLLDD-GLVGQQLFAGEATR 304 (334)
T ss_dssp ---------------------------------------HHHHHHHTSCHHHHHHHHHHHHHTCC-CC------------
T ss_pred ---------------------------------------HHHHHHHhCCHHHHHHHHHHHHhhhc-chHHHHHHHHHHHH
Confidence 23789999999999999999998754 45555667777777
Q ss_pred HHhhCCCcchHHhhHhhhhccCCCCCCCCCCC
Q 017189 304 HVMMGEVSKDFFEGCRAILLDKDKNPKWKPSK 335 (375)
Q Consensus 304 ~~~~~~~s~d~~egv~A~l~ek~r~P~w~~~~ 335 (375)
.++.+ +|++||++|| +|| |+|+|++..
T Consensus 305 ~~~~s---~d~~Eg~~AF-leK-R~P~f~~~~ 331 (334)
T 3t8b_A 305 LAYMT---DEAVEGRDAF-LQK-RPPDWSPFP 331 (334)
T ss_dssp --------------------------------
T ss_pred HHhcC---HHHHHHHHHH-HcC-CCCCCCCCC
Confidence 77764 5999999999 599 899999764
|
| >3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-55 Score=410.37 Aligned_cols=245 Identities=22% Similarity=0.341 Sum_probs=214.5
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
.+..|.++++++|++||||||+++|+||.+|+.+|.++++.++.| ++|+|||||+|++||+|+|++... ....+.
T Consensus 19 ~~~~i~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~----~~~~~~ 93 (264)
T 3he2_A 19 PGSMIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA----FAADYP 93 (264)
T ss_dssp ---CEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT----TGGGHH
T ss_pred CCCeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch----hhHHHH
Confidence 366799999999999999999999999999999999999999988 999999999999999999998321 113455
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++
T Consensus 94 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~lll 173 (264)
T 3he2_A 94 DRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARAMLL 173 (264)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHHHHH
Confidence 66678889999999999999999999999999999999999999999999999999999999999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.|+|+||+++||||+|++ ++ +++
T Consensus 174 tG~~i~A~eA~~~GLV~~v~~---~~---~a~------------------------------------------------ 199 (264)
T 3he2_A 174 SAEKLTAEIALHTGMANRIGT---LA---DAQ------------------------------------------------ 199 (264)
T ss_dssp HCCCEEHHHHHHHTSCSEECC---HH---HHH------------------------------------------------
T ss_pred cCCCccHHHHHHCCCeEEEec---HH---HHH------------------------------------------------
Confidence 999999999999999999986 21 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.+++|++.||.+++.+|++++.. ..+++.++.|...+..++.+ +|++||++|| +||
T Consensus 200 -----------------~~A~~la~~~p~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~s---~d~~Eg~~AF-~ek 256 (264)
T 3he2_A 200 -----------------AWAAEIARLAPLAIQHAKRVLNDD--GAIEEAWPAHKELFDKAWGS---QDVIEAQVAR-MEK 256 (264)
T ss_dssp -----------------HHHHHHHTSCHHHHHHHHHHHHTS--SCSCCCCHHHHHHHHHHHTS---HHHHHHHHHH-HTT
T ss_pred -----------------HHHHHHHcCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-hcC
Confidence 226899999999999999999986 34667778888899998965 5999999999 599
Q ss_pred CCCCCCCCC
Q 017189 326 DKNPKWKPS 334 (375)
Q Consensus 326 ~r~P~w~~~ 334 (375)
|+|+|+++
T Consensus 257 -R~P~f~g~ 264 (264)
T 3he2_A 257 -RPPKFQGA 264 (264)
T ss_dssp -SCCCCCCC
T ss_pred -CCCCCCCC
Confidence 89999864
|
| >2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-54 Score=408.08 Aligned_cols=250 Identities=18% Similarity=0.272 Sum_probs=211.6
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh----
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---- 82 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---- 82 (375)
+++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++ +|||||.|++||+|+|++++.......
T Consensus 24 ~~~~i~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 102 (280)
T 2f6q_A 24 GFETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEK 102 (280)
T ss_dssp ECSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHH
T ss_pred CCCeEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhHH
Confidence 466799999999999999999999999999999999999999999999 999999999999999999886432211
Q ss_pred -hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 83 -AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 83 -~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
..+...+.+++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++
T Consensus 103 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 182 (280)
T 2f6q_A 103 AKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKA 182 (280)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHHHH
Confidence 112344567788899999999999999999999999999999999999999999999999999999999999999 579
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
++|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 183 ~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------- 217 (280)
T 2f6q_A 183 TEMLIFGKKLTAGEACAQGLVTEVFPDSTFQK--EVW------------------------------------------- 217 (280)
T ss_dssp HHHHTTCCCEEHHHHHHTTSCSEEECTTTHHH--HHH-------------------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCcceEECHHHHHH--HHH-------------------------------------------
Confidence 99999999999999999999999999988743 222
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+.+++|+..||.+++.+|+.++.....+++++++.|.+.+..++.+ +|++||+++
T Consensus 218 ----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s---~d~~eg~~a 272 (280)
T 2f6q_A 218 ----------------------TRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLS---DECTNAVVN 272 (280)
T ss_dssp ----------------------HHHHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHTS---HHHHC----
T ss_pred ----------------------HHHHHHHhCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHhCC---HHHHHHHHH
Confidence 2368899999999999999999887778999999999999999965 499999999
Q ss_pred hhccCCCCC
Q 017189 321 ILLDKDKNP 329 (375)
Q Consensus 321 ~l~ek~r~P 329 (375)
| .+| |+|
T Consensus 273 f-~ek-R~p 279 (280)
T 2f6q_A 273 F-LSR-KSK 279 (280)
T ss_dssp ---------
T ss_pred H-Hcc-CCC
Confidence 9 598 776
|
| >4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-54 Score=404.31 Aligned_cols=248 Identities=18% Similarity=0.204 Sum_probs=215.7
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFF 86 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 86 (375)
++.|.++++++|++||||||++ |+||.+|+.+|.++|+.++.|+++|+|||||.|++||+|+|++++....... ..+.
T Consensus 23 ~~~v~~~~~~~Va~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~ 101 (277)
T 4di1_A 23 NEFVSVVADQGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNAPEADTAA 101 (277)
T ss_dssp CCSEEEEEETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCHHHHHHHH
T ss_pred CceEEEEEECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccChHHHHHHH
Confidence 4579999999999999999999 9999999999999999999999999999999999999999999987653322 4455
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
..++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++++|++
T Consensus 102 ~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lll 181 (277)
T 4di1_A 102 RVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVF 181 (277)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHHHHHH
Confidence 66778889999999999999999999999999999999999999999999999999999999999999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||+.++|+||+++||||+|||++++.. .+.
T Consensus 182 tG~~i~A~eA~~~GLV~~vv~~~~l~~--~a~------------------------------------------------ 211 (277)
T 4di1_A 182 SGRFFDAEEALALGLIDDMVAPDDVYD--SAV------------------------------------------------ 211 (277)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHH--HHH------------------------------------------------
T ss_pred cCCCCCHHHHHHCCCccEEeChhHHHH--HHH------------------------------------------------
Confidence 999999999999999999999988743 222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.+++|+..||.+++.+|++++.....+++++++.|...+..++.+ + ||
T Consensus 212 -----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~-----------ek 260 (277)
T 4di1_A 212 -----------------AWARRYLECPPRALAAAKAVINDVFELEATERAAAERRRYVELFAA---G-----------QR 260 (277)
T ss_dssp -----------------HHHHTTTTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHTTSG---G-----------GC
T ss_pred -----------------HHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcC---c-----------cc
Confidence 2378999999999999999999999999999999999999988853 2 88
Q ss_pred CCCCC--CCCCCccC
Q 017189 326 DKNPK--WKPSKLEL 338 (375)
Q Consensus 326 ~r~P~--w~~~~~~~ 338 (375)
|+|+ |+++.+.+
T Consensus 261 -R~P~~~f~g~~~~~ 274 (277)
T 4di1_A 261 -GPDGRGPGGGNTGD 274 (277)
T ss_dssp ---------------
T ss_pred -CCCcCcCCCCCcCC
Confidence 8999 99987644
|
| >3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-54 Score=402.84 Aligned_cols=244 Identities=19% Similarity=0.226 Sum_probs=206.4
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHHHH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFFSK 88 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~~ 88 (375)
.|.++++++|++||||||++.|+||.+|+.+|.++++.+++ +++|+|||||.|++||+|+|++++....... ...+..
T Consensus 8 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 86 (254)
T 3isa_A 8 PLAIERRPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGDLLLRMVR 86 (254)
T ss_dssp SEEEEECSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHHHHHHHHH
T ss_pred eEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchhHHHHHHH
Confidence 39999999999999999999999999999999999999987 5899999999999999999999986543222 223345
Q ss_pred HHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcC
Q 017189 89 EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTG 167 (375)
Q Consensus 89 ~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG 167 (375)
+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++++|+|++| .++++|++||
T Consensus 87 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l~ltg 163 (254)
T 3isa_A 87 IEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSILGSA 163 (254)
T ss_dssp HHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHHHTTT
T ss_pred HHHHHHHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHHHHhC
Confidence 66788999999999999999999999999999999999999999999999999998 3789999999 6799999999
Q ss_pred CccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILS 247 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~ 247 (375)
+.++|+||+++||||+|||++++.....
T Consensus 164 ~~~~a~eA~~~GLv~~vv~~~~l~~~a~---------------------------------------------------- 191 (254)
T 3isa_A 164 RAFDADEARRIGFVRDCAAQAQWPALID---------------------------------------------------- 191 (254)
T ss_dssp CEEEHHHHHHTTSSSEECCGGGHHHHHH----------------------------------------------------
T ss_pred CCCcHHHHHHCCCccEEeChhHHHHHHH----------------------------------------------------
Confidence 9999999999999999999988754322
Q ss_pred HHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCC
Q 017189 248 ALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDK 327 (375)
Q Consensus 248 ~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r 327 (375)
+.++++++.||.+++.+|++++. +.++.|...+...+.++ |++||+++| ++| |
T Consensus 192 ---------------~~a~~la~~~~~a~~~~K~~l~~-------~~~~~e~~~~~~~~~s~---d~~egi~af-~ek-r 244 (254)
T 3isa_A 192 ---------------AAAEAATALDPATRATLHRVLRD-------DHDDADLAALARSAAQP---GFKARIRDY-LAQ-P 244 (254)
T ss_dssp ---------------HHHHHHTTSCHHHHHHHHHHHSC-------CCHHHHHHHHHHHHHST---THHHHHHHH-HHC--
T ss_pred ---------------HHHHHHHcCCHHHHHHHHHHHhh-------hhHHHHHHHHHHHhCCH---HHHHHHHHH-Hhc-C
Confidence 23789999999999999999843 23456777888888766 999999999 599 8
Q ss_pred CCCCCCCCc
Q 017189 328 NPKWKPSKL 336 (375)
Q Consensus 328 ~P~w~~~~~ 336 (375)
+|+|++.++
T Consensus 245 ~p~~~~~~~ 253 (254)
T 3isa_A 245 AAEGHHHHH 253 (254)
T ss_dssp ---------
T ss_pred CCCCCCCCC
Confidence 999998764
|
| >2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-54 Score=400.66 Aligned_cols=243 Identities=21% Similarity=0.278 Sum_probs=203.6
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEee-CCCCccccCCchhHhhccchh--hHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKG-KGRAFCAGGDVAAVVRGINEG--AKFFS 87 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg-~g~~F~aG~Dl~~~~~~~~~~--~~~~~ 87 (375)
|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+||||| .|++||+|+|++++....... ..+..
T Consensus 2 v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 81 (250)
T 2a7k_A 2 VFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWID 81 (250)
T ss_dssp EEEEEETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHH
T ss_pred eEEEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHHH
Confidence 678899999999999999999999999999999999999999999999999 899999999999986532211 23445
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|+|++| .+++++++|
T Consensus 82 ~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~lt 160 (250)
T 2a7k_A 82 RVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEIIYQ 160 (250)
T ss_dssp HHHHHHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHHHc
Confidence 56788889999999999999999999999999999999999999999999999999999999 9999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||+|||++++.. .+.
T Consensus 161 g~~~~a~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------- 189 (250)
T 2a7k_A 161 CQSLDAPRCVDYRLVNQVVESSALLD--AAI------------------------------------------------- 189 (250)
T ss_dssp CCCBCHHHHHHHTCCSEEECHHHHHH--HHH-------------------------------------------------
T ss_pred CCcccHHHHHHcCCcceecCHHHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999877633 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.+++|++.||.+++.+|++++.....++.++++.|.+.+..++.++ |++||+++|+ +|
T Consensus 190 ----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~---d~~eg~~af~-ek 248 (250)
T 2a7k_A 190 ----------------TQAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASKAVHKAAFQAR---DAQGHFKNVL-GK 248 (250)
T ss_dssp ----------------HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------------------
T ss_pred ----------------HHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHH-hc
Confidence 23789999999999999999998877789999999999998888655 9999999994 88
|
| >3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-53 Score=398.37 Aligned_cols=245 Identities=24% Similarity=0.291 Sum_probs=206.4
Q ss_pred CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc-----c-
Q 017189 8 EDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI-----N- 80 (375)
Q Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-----~- 80 (375)
++.+.++. +++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.... .
T Consensus 5 ~~~~~~~~~~~~v~~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (263)
T 3l3s_A 5 QDGLLGEVLSEGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGR 83 (263)
T ss_dssp ---CEEEEESSSEEEEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSH
T ss_pred ccceEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccH
Confidence 34566666 89999999999999 9999999999999999999999999999999999999999999876531 1
Q ss_pred hh-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H
Q 017189 81 EG-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F 158 (375)
Q Consensus 81 ~~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~ 158 (375)
.. ..+...++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++| .
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG~~ 162 (263)
T 3l3s_A 84 AFVTDLFEACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIGRR 162 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcCHH
Confidence 11 4456667788999999999999999999999999999999999999999999999999999 5678999999999 6
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
++++|++||+.++|+||+++||||+|||++++.. .+.
T Consensus 163 ~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------- 199 (263)
T 3l3s_A 163 AVTEMALTGATYDADWALAAGLINRILPEAALAT--HVA----------------------------------------- 199 (263)
T ss_dssp HHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHH--HHH-----------------------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHH--HHH-----------------------------------------
Confidence 7999999999999999999999999999887743 222
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhH
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGC 318 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv 318 (375)
+.+++|+..||.+++.+|++++.....+++++++.|.+.+..++.++ |++||+
T Consensus 200 ------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~---d~~Eg~ 252 (263)
T 3l3s_A 200 ------------------------DLAGALAARNQAPLRRGLETLNRHLELPLEQAYALATPVMVEHFMDP---GRRHLD 252 (263)
T ss_dssp ------------------------HHHHHHHSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHC-----------
T ss_pred ------------------------HHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCH---HHHHHH
Confidence 33789999999999999999999999999999999999999999755 999999
Q ss_pred hhhhccC
Q 017189 319 RAILLDK 325 (375)
Q Consensus 319 ~A~l~ek 325 (375)
+|| ++.
T Consensus 253 ~Af-~~~ 258 (263)
T 3l3s_A 253 WID-EGH 258 (263)
T ss_dssp -------
T ss_pred HHh-hcc
Confidence 999 665
|
| >1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=399.33 Aligned_cols=249 Identities=18% Similarity=0.214 Sum_probs=215.1
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeC-CCCccccCCchhHhhccchh-hHHHH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK-GRAFCAGGDVAAVVRGINEG-AKFFS 87 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~-g~~F~aG~Dl~~~~~~~~~~-~~~~~ 87 (375)
.|.++.+++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||. |++||+|+|++++....... ..+..
T Consensus 6 ~v~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 84 (260)
T 1sg4_A 6 LVEPDAGAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAGYWK 84 (260)
T ss_dssp EEEEETTTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHHHHH
T ss_pred EEEEEecCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccCHHHHHHHHH
Confidence 3566777999999999997 699999999999999999999999999999999 69999999999875432111 34455
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEe--CCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT--ENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~--~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
.++.++.++.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|++| .++++|+
T Consensus 85 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ll 164 (260)
T 1sg4_A 85 AVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERAL 164 (260)
T ss_dssp HHHHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHHHH
Confidence 66788889999999999999999999999999999999999 89999999999999999999999999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||+|||++++.. ++.
T Consensus 165 ltg~~~~a~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------------- 195 (260)
T 1sg4_A 165 QLGLLFPPAEALQVGIVDQVVPEEQVQS--TAL----------------------------------------------- 195 (260)
T ss_dssp HHTCCBCHHHHHHHTSSSEEECGGGHHH--HHH-----------------------------------------------
T ss_pred HcCCcCCHHHHHHcCCCCEecCHHHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999888743 332
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhcc
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLD 324 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~e 324 (375)
+.+++|+..||.+++.+|++++.....++.++++.|...+..++.+ +|++||+++| .+
T Consensus 196 ------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s---~d~~eg~~af-~e 253 (260)
T 1sg4_A 196 ------------------SAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFISK---DSIQKSLQMY-LE 253 (260)
T ss_dssp ------------------HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTS---HHHHHHHTC----
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-HH
Confidence 2378999999999999999999887778889999999999999965 4999999999 59
Q ss_pred CCCCCCC
Q 017189 325 KDKNPKW 331 (375)
Q Consensus 325 k~r~P~w 331 (375)
| |+|+-
T Consensus 254 k-r~~~~ 259 (260)
T 1sg4_A 254 R-LKEEK 259 (260)
T ss_dssp -------
T ss_pred h-hcccC
Confidence 8 77763
|
| >3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-53 Score=402.82 Aligned_cols=250 Identities=16% Similarity=0.197 Sum_probs=221.1
Q ss_pred CCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCC-CccccCCchhHhhcc
Q 017189 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR-AFCAGGDVAAVVRGI 79 (375)
Q Consensus 1 M~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~-~F~aG~Dl~~~~~~~ 79 (375)
|+.. ..++.|.++++++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||+|+ +||+|+|++++....
T Consensus 1 Ms~~-~~~~~v~~~~~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~ 78 (289)
T 3h0u_A 1 MSLT-ASYETIKARLDGTVLSATFNAPP-MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYT 78 (289)
T ss_dssp -CCC-CCCSSEEEEEETTEEEEEECCTT-TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHH
T ss_pred CCCC-CCCCeEEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcC
Confidence 5433 45778999999999999999998 79999999999999999999999999999999995 456677999886532
Q ss_pred chh-h---HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhh
Q 017189 80 NEG-A---KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSR 154 (375)
Q Consensus 80 ~~~-~---~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~r 154 (375)
... . .+...+++++.++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r 158 (289)
T 3h0u_A 79 AEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTR 158 (289)
T ss_dssp HHHHTTSSTTCCSHHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHH
Confidence 211 1 33445677888999999999999999999999999999999999998 999999999999999999999999
Q ss_pred cch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHH
Q 017189 155 LPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVI 233 (375)
Q Consensus 155 l~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 233 (375)
++| .++++|++||+.|+|+||+++||||+|||++++.. .+.
T Consensus 159 ~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~--~a~------------------------------------ 200 (289)
T 3h0u_A 159 LLGRGRALEAVLTSSDFDADLAERYGWVNRAVPDAELDE--FVA------------------------------------ 200 (289)
T ss_dssp HHCHHHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHH--HHH------------------------------------
T ss_pred HhCHHHHHHHHHcCCCCCHHHHHHCCCccEecCHHHHHH--HHH------------------------------------
Confidence 999 67999999999999999999999999999887743 222
Q ss_pred HHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcch
Q 017189 234 DKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKD 313 (375)
Q Consensus 234 ~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d 313 (375)
+++++|++.||.+++.+|++++.... ++.++++.|...+..++.+ +|
T Consensus 201 -----------------------------~lA~~la~~~p~a~~~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s---~d 247 (289)
T 3h0u_A 201 -----------------------------GIAARMSGFPRDALIAAKSAINAISL-PAPAEVRADAALFQQLVRG---EK 247 (289)
T ss_dssp -----------------------------HHHHHHHTSCHHHHHHHHHHHHHHHS-CCHHHHHHHHHHHHHHTTS---HH
T ss_pred -----------------------------HHHHHHHhCCHHHHHHHHHHHHhhcc-cHHHHHHHHHHHHHHHhCC---HH
Confidence 33789999999999999999999877 8999999999999999965 49
Q ss_pred HHhhHhhhhcc
Q 017189 314 FFEGCRAILLD 324 (375)
Q Consensus 314 ~~egv~A~l~e 324 (375)
++||++||+ |
T Consensus 248 ~~egi~AFl-e 257 (289)
T 3h0u_A 248 VQQRTAELF-K 257 (289)
T ss_dssp HHHHHHHHH-H
T ss_pred HHHHHHHHh-C
Confidence 999999995 7
|
| >2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-52 Score=389.60 Aligned_cols=239 Identities=19% Similarity=0.221 Sum_probs=213.8
Q ss_pred cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHH
Q 017189 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKE 89 (375)
Q Consensus 10 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 89 (375)
-+.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++........ ..
T Consensus 4 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~----~~ 79 (243)
T 2q35_A 4 VQLTELGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGEV----EV 79 (243)
T ss_dssp EEEEEEETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTCC----CC
T ss_pred eEEEEeeCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchhh----HH
Confidence 35578899999999999999999999999999999999999999999999999999999999998754211101 12
Q ss_pred HHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCC
Q 017189 90 FILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGA 168 (375)
Q Consensus 90 ~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~ 168 (375)
++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+++++++||+
T Consensus 80 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~ltg~ 159 (243)
T 2q35_A 80 LDLSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYTGE 159 (243)
T ss_dssp CCCHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHHcCC
Confidence 45667889999999999999999999999999999999999999999999999999999999999999 67999999999
Q ss_pred ccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHH
Q 017189 169 RLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSA 248 (375)
Q Consensus 169 ~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~ 248 (375)
.++|+||+++||||+|+|++++.. .+.
T Consensus 160 ~~~a~eA~~~GLv~~vv~~~~l~~--~a~--------------------------------------------------- 186 (243)
T 2q35_A 160 NYRGKELAERGIPFPVVSRQDVLN--YAQ--------------------------------------------------- 186 (243)
T ss_dssp CEEHHHHHHTTCSSCEECHHHHHH--HHH---------------------------------------------------
T ss_pred CCCHHHHHHcCCCCEecChhHHHH--HHH---------------------------------------------------
Confidence 999999999999999999877633 222
Q ss_pred HhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 249 LESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 249 L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.++++++.||.+++.+|++++.....++.++++.|...+..++.++ |++||+++||
T Consensus 187 --------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~---d~~eg~~a~~ 243 (243)
T 2q35_A 187 --------------QLGQKIAKSPRLSLVALKQHLSADIKAKFPEAIKKELEIHQVTFNQP---EIASRIQQEF 243 (243)
T ss_dssp --------------HHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSST---THHHHHHTTC
T ss_pred --------------HHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCH---HHHHHHhhcC
Confidence 23789999999999999999999887789999999999999999755 9999999974
|
| >1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-52 Score=392.49 Aligned_cols=249 Identities=16% Similarity=0.194 Sum_probs=204.5
Q ss_pred CCCCCCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccc
Q 017189 1 MASAQSQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGIN 80 (375)
Q Consensus 1 M~~~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 80 (375)
|+..-++++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 1 ~~~~~m~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~ 80 (280)
T 1pjh_A 1 MSQEIRQNEKISYRIEGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQG 80 (280)
T ss_dssp ----CCCBTTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC---
T ss_pred CCcccccCCceEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhccc
Confidence 44443456789999999999999999999999999999999999999999999999999999999999999998753211
Q ss_pred -------hh-h----HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEe-CCeEEeccccccCCCCCcc
Q 017189 81 -------EG-A----KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT-ENSVFAMPETALGLFPDIG 147 (375)
Q Consensus 81 -------~~-~----~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~-~~a~f~~pe~~~G~~p~~g 147 (375)
.. . .++...+.++.++.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g 160 (280)
T 1pjh_A 81 DDTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGG 160 (280)
T ss_dssp ----CCSSHHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTT
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCcc
Confidence 00 1 122233577888999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCc-----cHHHHHHHHHhcCCCChHHHHHHHHHhccCCCC
Q 017189 148 ASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSS-----RLALLEEALYKVNSSDPAVISAVIDKFSLEPYL 221 (375)
Q Consensus 148 ~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~-----~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 221 (375)
++++|+|++| .++++|++||+.++|+||+++||||+|||++ ++.. +++
T Consensus 161 ~~~~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~--~a~------------------------ 214 (280)
T 1pjh_A 161 TTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNA--KVL------------------------ 214 (280)
T ss_dssp HHHHHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHH--HHH------------------------
T ss_pred HHHHHHHHhCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHH--HHH------------------------
Confidence 9999999999 6799999999999999999999999999985 3421 221
Q ss_pred CcchhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHH
Q 017189 222 KDHSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRM 301 (375)
Q Consensus 222 ~~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~ 301 (375)
.+++++|++.||.+++.+|++++......+....
T Consensus 215 ----------------------------------------~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~------ 248 (280)
T 1pjh_A 215 ----------------------------------------EELREKVKGLYLPSCLGMKKLLKSNHIDAFNKAN------ 248 (280)
T ss_dssp ----------------------------------------HHHHHHHTTCCHHHHHHHHHHHHTTTHHHHHHHH------
T ss_pred ----------------------------------------HHHHHHHHcCCHHHHHHHHHHHHHhHHHHHHHhh------
Confidence 0237899999999999999999876533333221
Q ss_pred HHHHhhCCCcchHHhhHhhhhccCCCCC-CCC
Q 017189 302 VCHVMMGEVSKDFFEGCRAILLDKDKNP-KWK 332 (375)
Q Consensus 302 ~~~~~~~~~s~d~~egv~A~l~ek~r~P-~w~ 332 (375)
++|++||+++| .+| |.| .|.
T Consensus 249 ---------~~d~~e~~~af-~~k-r~~e~~~ 269 (280)
T 1pjh_A 249 ---------SVEVNESLKYW-VDG-EPLKRFR 269 (280)
T ss_dssp ---------HHHHHHHHHHH-HHT-HHHHHHT
T ss_pred ---------hHHHHHHHHHH-hCC-ccHHHHH
Confidence 23777777777 366 556 455
|
| >2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=380.27 Aligned_cols=236 Identities=17% Similarity=0.205 Sum_probs=207.1
Q ss_pred CCCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh--h
Q 017189 7 QEDQVLEEETS-FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--A 83 (375)
Q Consensus 7 ~~~~v~~~~~~-~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--~ 83 (375)
+++.|.+++++ +|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... .
T Consensus 21 ~~~~i~~~~~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 100 (263)
T 2j5g_A 21 KYENLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWD 100 (263)
T ss_dssp SCTTEEEEECTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHH
T ss_pred CCCeEEEEEcCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHH
Confidence 36679999999 99999999999999999999999999999999999999999999999999999999875432111 2
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEec-cccccCCCCCccHHHHHhhcch-HHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAM-PETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~-pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
.+...+.+++.++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++| .+++
T Consensus 101 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ 179 (263)
T 2j5g_A 101 KTYWEGKKVLQNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRGR 179 (263)
T ss_dssp HHHHHHHHHHHHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHHH
Confidence 34445567888999999999999999999 5999999999999999999999 9999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+|++||+.++|+||+++||||+|||++++.. ++.
T Consensus 180 ~llltG~~~~A~eA~~~GLv~~vv~~~~l~~--~a~-------------------------------------------- 213 (263)
T 2j5g_A 180 YFLFTQEKLTAQQAYELNVVHEVLPQSKLME--RAW-------------------------------------------- 213 (263)
T ss_dssp HHHHTTCCEEHHHHHHTTSCSEEECGGGHHH--HHH--------------------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEecChHHHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999988743 222
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAI 321 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~ 321 (375)
+.+++|++.||.+++.+|+++++....++.++++.| ...||++||
T Consensus 214 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e--------------~~~eg~~af 258 (263)
T 2j5g_A 214 ---------------------EIARTLAKQPTLNLRYTRVALTQRLKRLVNEGIGYG--------------LALEGITAT 258 (263)
T ss_dssp ---------------------HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHH
T ss_pred ---------------------HHHHHHHhCCHHHHHHHHHHHHhhhhccHHHHHHHH--------------HHHhhHHHH
Confidence 237899999999999999999987666666665543 455999999
Q ss_pred hccC
Q 017189 322 LLDK 325 (375)
Q Consensus 322 l~ek 325 (375)
+ +|
T Consensus 259 ~-~~ 261 (263)
T 2j5g_A 259 D-LR 261 (263)
T ss_dssp H-TT
T ss_pred H-hc
Confidence 5 77
|
| >3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=392.17 Aligned_cols=257 Identities=21% Similarity=0.302 Sum_probs=207.3
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccch----
Q 017189 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINE---- 81 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---- 81 (375)
.+++.|.++++++|++||||||++.|+||.+|+.+|.++|+.++.|+++|+|||||.|++||+|+|++++......
T Consensus 32 ~~~~~i~~e~~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~~ 111 (333)
T 3njd_A 32 DNLKTMTYEVTDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGGG 111 (333)
T ss_dssp TSCSSEEEEEETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC--------------
T ss_pred CCCCeEEEEEECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhcccccccc
Confidence 4577899999999999999999999999999999999999999999999999999999999999999987543211
Q ss_pred ---------------------------hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEe
Q 017189 82 ---------------------------GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFA 134 (375)
Q Consensus 82 ---------------------------~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~ 134 (375)
...+...+..++..|.++||||||+|||+|+|||++|+++||+|||+++++|+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~f~ 191 (333)
T 3njd_A 112 SPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIG 191 (333)
T ss_dssp -CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCEEE
T ss_pred cccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCeee
Confidence 01234556677788999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHH
Q 017189 135 MPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVID 213 (375)
Q Consensus 135 ~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~ 213 (375)
+||+++|++|++| ++++++| .++++|++||+.|+|+||+++||||+|||++++.. ++.
T Consensus 192 ~pe~~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~--~a~---------------- 250 (333)
T 3njd_A 192 YPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDA--RTE---------------- 250 (333)
T ss_dssp CGGGGTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHH--HHH----------------
T ss_pred chhhceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHH--HHH----------------
Confidence 9999999999887 4788899 67999999999999999999999999999988744 222
Q ss_pred HhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc-CCHH
Q 017189 214 KFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL-QGVG 292 (375)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~-~~l~ 292 (375)
+++++|++.||.+++.+|++++.... ..+.
T Consensus 251 -------------------------------------------------~lA~~ia~~~~~al~~~K~~l~~~~~~~~~~ 281 (333)
T 3njd_A 251 -------------------------------------------------RLVERIAAMPVNQLIMAKLACNTALLNQGVA 281 (333)
T ss_dssp -------------------------------------------------HHHHHHHTSCHHHHHHHHHHHHHHHHTTTHH
T ss_pred -------------------------------------------------HHHHHHHcCCHHHHHHHHHHHHHHHHhcchh
Confidence 23799999999999999999998765 3454
Q ss_pred HH--HHHHHHHHHHHhhCCCcchH-----HhhHhhhhccCCCCCCCCCCCc
Q 017189 293 QC--LIREYRMVCHVMMGEVSKDF-----FEGCRAILLDKDKNPKWKPSKL 336 (375)
Q Consensus 293 ~~--l~~e~~~~~~~~~~~~s~d~-----~egv~A~l~ek~r~P~w~~~~~ 336 (375)
.. +........+. .+..+.| .+|+++| ++| |.|.|.+.+.
T Consensus 282 ~~~~~~~~~~~~~~~--~~e~~~f~~~~~~~g~~a~-~ek-R~~~f~~~~~ 328 (333)
T 3njd_A 282 TSQMVSTVFDGIARH--TPEGHAFVATAREHGFREA-VRR-RDEPMGDHGR 328 (333)
T ss_dssp HHHHHHHHHHHHHTT--SHHHHHHHHHHHHHCHHHH-HHH-HHGGGTCCTT
T ss_pred HHHHHHHHHHHHHhc--ChHHHHHHHHhhhHHHHHH-HHh-cCCCCCCccc
Confidence 43 22222211111 0011233 7999999 599 8999998553
|
| >3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-50 Score=370.89 Aligned_cols=225 Identities=19% Similarity=0.199 Sum_probs=202.0
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFFS 87 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~ 87 (375)
+.|.++++++|++||||||+ .|+||.+|+.+|.++++.+++| ++|+|||||.|++||+|+|++++....... ..+..
T Consensus 5 ~~v~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 82 (233)
T 3r6h_A 5 GPVTYTHDDAIGVIRMDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEAKPAIDMLR 82 (233)
T ss_dssp CCEEEEEETTEEEEEECCSS-SCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---CHHHHHHHH
T ss_pred CceEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccChHHHHHHHH
Confidence 46999999999999999985 6999999999999999999987 599999999999999999999986542222 45666
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
..++++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++| .+++++++|
T Consensus 83 ~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~~l~lt 162 (233)
T 3r6h_A 83 GGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGL 162 (233)
T ss_dssp HHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHHHHHHS
T ss_pred HHHHHHHHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHHHHHHc
Confidence 7778999999999999999999999999999999999999999999999999999999999999999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|++++|+||+++||||+|||++++.. ++.
T Consensus 163 g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------- 191 (233)
T 3r6h_A 163 AKTFFGETALAAGFIDEISLPEVVLS--RAE------------------------------------------------- 191 (233)
T ss_dssp CCEECHHHHHHHTSCSEECCGGGHHH--HHH-------------------------------------------------
T ss_pred CCcCCHHHHHHcCCCcEeeCHHHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999988743 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMV 302 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~ 302 (375)
+.+++|++.||.+++.+|+++++....+++++++.|...+
T Consensus 192 ----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~f 231 (233)
T 3r6h_A 192 ----------------EAAREFAGLNQQAHNATKLRARAEALKAIRAGIDGIEAEF 231 (233)
T ss_dssp ----------------HHHHHHHTSCHHHHHHHHHHTTHHHHHHHHHHHHTSHHHH
T ss_pred ----------------HHHHHHHcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 2378999999999999999999988888999999887765
|
| >3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-49 Score=366.18 Aligned_cols=224 Identities=18% Similarity=0.199 Sum_probs=201.2
Q ss_pred CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHH
Q 017189 9 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSK 88 (375)
Q Consensus 9 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 88 (375)
+.|.++++++|++||||||+ .|+||.+|+.+|.++++.++.| +|+|||||.|++||+|+|++++.........+...
T Consensus 6 ~~v~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 82 (232)
T 3ot6_A 6 DLVSYHLDDGVATLTLNNGK-VNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSSAEAAINLVAQ 82 (232)
T ss_dssp HHEEEEEETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHCHHHHHHHHHH
T ss_pred cceEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhChHHHHHHHHH
Confidence 46899999999999999985 6999999999999999999987 49999999999999999999987633222455666
Q ss_pred HHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 89 EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 89 ~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+.++.++.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|+++++++++| .+++++++|
T Consensus 83 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l~lt 162 (232)
T 3ot6_A 83 GSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRSVIN 162 (232)
T ss_dssp HHHHHHHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHHHTS
T ss_pred HHHHHHHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHHHHc
Confidence 778899999999999999999999999999999999999998 899999999999988888889999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||+|||++++.. ++.
T Consensus 163 g~~i~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------------------------- 191 (232)
T 3ot6_A 163 AEMFDPEGAMAAGFLDKVVSVEELQG--AAL------------------------------------------------- 191 (232)
T ss_dssp CCEECHHHHHHHTSCSEEECTTTHHH--HHH-------------------------------------------------
T ss_pred CCccCHHHHHHCCCCCEecCHHHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999998843 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMV 302 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~ 302 (375)
+.+++|++.||.+++.+|++++.....+++++++.|.+.+
T Consensus 192 ----------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 192 ----------------AVAAQLKKINMNAHKKTKLKVRKGLLDTLDAAIEQDRQHM 231 (232)
T ss_dssp ----------------HHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ----------------HHHHHHHcCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHhc
Confidence 3378999999999999999999998889999999988753
|
| >3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=374.08 Aligned_cols=246 Identities=15% Similarity=0.194 Sum_probs=211.5
Q ss_pred CCcEEE--EEeCCEEEEEEcCCCC----CCCCCHHHHHHHHHHHHHhhc-----CCCceEEEEeeCCCCccccCCchhHh
Q 017189 8 EDQVLE--EETSFVRILTLNRPRQ----LNALSAQMISRLLELFQRYET-----DSNVKLLILKGKGRAFCAGGDVAAVV 76 (375)
Q Consensus 8 ~~~v~~--~~~~~v~~itlnrp~~----~Nal~~~~~~eL~~~l~~~~~-----d~~vr~vVltg~g~~F~aG~Dl~~~~ 76 (375)
|+++.+ +++++|++||||||+| .|+||.+|+.+|.++|+.++. |+++|+|||||.|++||+|+|++++.
T Consensus 29 y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~ 108 (305)
T 3m6n_A 29 GSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFC 108 (305)
T ss_dssp CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHH
T ss_pred CceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHH
Confidence 555554 6689999999999998 459999999999999999987 58999999999999999999999986
Q ss_pred hccchh-----hHHHHHHHHHHHHH---HhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccH
Q 017189 77 RGINEG-----AKFFSKEFILNYLM---ATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGA 148 (375)
Q Consensus 77 ~~~~~~-----~~~~~~~~~l~~~i---~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~ 148 (375)
...... ..+...+...+..+ ..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~ 188 (305)
T 3m6n_A 109 QLIREGDRARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGA 188 (305)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSH
T ss_pred hccccccHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCccH
Confidence 542211 23344444445444 4689999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhh
Q 017189 149 SYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAY 227 (375)
Q Consensus 149 ~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (375)
+++|+|++| .++++|++||+.|+|+||+++||||+|||++++.. .+.
T Consensus 189 ~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~--~a~------------------------------ 236 (305)
T 3m6n_A 189 YSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVA--AVE------------------------------ 236 (305)
T ss_dssp HHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHH--HHH------------------------------
T ss_pred HHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHH--HHH------------------------------
Confidence 999999999 67999999999999999999999999999998844 222
Q ss_pred hHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhh
Q 017189 228 HWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMM 307 (375)
Q Consensus 228 ~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~ 307 (375)
+++++|++ +|.+++.+|++++.....+++++++.|...+..++.
T Consensus 237 -----------------------------------~~a~~la~-~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~ 280 (305)
T 3m6n_A 237 -----------------------------------QVIRESKR-TPHAWAAMQQVREMTTAVPLEEMMRITEIWVDTAMQ 280 (305)
T ss_dssp -----------------------------------HHHHHHTT-CHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------------HHHHHHhh-ChHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHc
Confidence 22678876 899999999999999999999999999999999997
Q ss_pred CCCcchHHhhHhhhhcc
Q 017189 308 GEVSKDFFEGCRAILLD 324 (375)
Q Consensus 308 ~~~s~d~~egv~A~l~e 324 (375)
++ |....+-+.|+.
T Consensus 281 s~---d~~~~~m~~l~~ 294 (305)
T 3m6n_A 281 LG---EKSLRTMDRLVR 294 (305)
T ss_dssp CC---HHHHHHHHHHHH
T ss_pred Cc---hHHHHHHHHHHH
Confidence 65 887777776554
|
| >3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-49 Score=372.04 Aligned_cols=246 Identities=19% Similarity=0.248 Sum_probs=199.7
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh---
Q 017189 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--- 82 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--- 82 (375)
++++.|.++++++|++||||||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 17 ~~~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~ 96 (279)
T 3t3w_A 17 RTEMYIDYDVSDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTLE 96 (279)
T ss_dssp --CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCHH
T ss_pred ccCCeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccchH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999886542111
Q ss_pred ---hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H
Q 017189 83 ---AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F 158 (375)
Q Consensus 83 ---~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~ 158 (375)
......+..++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+. +.++..+ +|++| .
T Consensus 97 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~-~~~~~~~-~~~vG~~ 174 (279)
T 3t3w_A 97 FIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIG-GVEYHGH-TWELGPR 174 (279)
T ss_dssp HHHHHHHHHTHHHHHHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTCS-SCSSCCH-HHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCCC-CchHHHH-HhhcCHH
Confidence 1123345567888999999999999999999999999999999999999999999999994 4444433 88999 6
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
++++|++||++++|+||+++||||+|||++++.....
T Consensus 175 ~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~------------------------------------------- 211 (279)
T 3t3w_A 175 KAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETR------------------------------------------- 211 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHH-------------------------------------------
T ss_pred HHHHHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHH-------------------------------------------
Confidence 7999999999999999999999999999988744222
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhc-CCHHHHHHHHHHHHHHHhhCCCcchHHhh
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRL-QGVGQCLIREYRMVCHVMMGEVSKDFFEG 317 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~-~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 317 (375)
+.+++|++.||.+++.+|+++++... .+++++++.++... ++.|+
T Consensus 212 ------------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~----------~~~~~ 257 (279)
T 3t3w_A 212 ------------------------ALAGEIAKMPPFALRQAKRAVNQTLDVQGFYAAIQSVFDIH----------QTGHG 257 (279)
T ss_dssp ------------------------HHHHHHHTSCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH----------HHHHH
T ss_pred ------------------------HHHHHHHcCCHHHHHHHHHHHHHhhhcccHHHHHHHHhhHH----------HHHHH
Confidence 23789999999999999999998765 57888887776654 44455
Q ss_pred HhhhhccCCCCCCCCC
Q 017189 318 CRAILLDKDKNPKWKP 333 (375)
Q Consensus 318 v~A~l~ek~r~P~w~~ 333 (375)
. +|. +. ..|.+.+
T Consensus 258 ~-~~~-~~-~~~~~~~ 270 (279)
T 3t3w_A 258 N-AMS-VS-GWPVLVD 270 (279)
T ss_dssp H-HHH-HT-SSCC---
T ss_pred H-HHH-hc-CCccccC
Confidence 5 442 33 4565543
|
| >1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=365.51 Aligned_cols=224 Identities=18% Similarity=0.236 Sum_probs=197.8
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hHHH
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AKFF 86 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~ 86 (375)
++.|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ..+.
T Consensus 15 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 94 (257)
T 1szo_A 15 YENIRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDEII 94 (257)
T ss_dssp CTTEEEEEETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHHHH
T ss_pred CceEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcCCHHHHHHHH
Confidence 457999999999999999999999999999999999999999999999999999999999999999875321111 2334
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEec-cccccCCCCCccHHHHHhhcch-HHHHHHh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAM-PETALGLFPDIGASYFLSRLPG-FFGEYVG 164 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~-pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ 164 (375)
...++++.++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++| .++++++
T Consensus 95 ~~~~~~~~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~ll 173 (257)
T 1szo_A 95 FEGQRLLNNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRYFL 173 (257)
T ss_dssp HHHHHHHHHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHHHH
Confidence 44567888999999999999999999 5999999999999999999999 9999999999999999999999 6799999
Q ss_pred hcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHH
Q 017189 165 LTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEE 244 (375)
Q Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 244 (375)
+||+.++|+||+++||||+|||++++.. ++.
T Consensus 174 ltG~~~~A~eA~~~GLv~~vv~~~~l~~--~a~----------------------------------------------- 204 (257)
T 1szo_A 174 LTGQELDARTALDYGAVNEVLSEQELLP--RAW----------------------------------------------- 204 (257)
T ss_dssp HTTCEEEHHHHHHHTSCSEEECHHHHHH--HHH-----------------------------------------------
T ss_pred HcCCCCCHHHHHHCCCceEEeChHHHHH--HHH-----------------------------------------------
Confidence 9999999999999999999999877633 222
Q ss_pred HHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHH
Q 017189 245 ILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREY 299 (375)
Q Consensus 245 i~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~ 299 (375)
+.+++|++.||.+++.+|+++++....++.++++.|.
T Consensus 205 ------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~~~ 241 (257)
T 1szo_A 205 ------------------ELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLGL 241 (257)
T ss_dssp ------------------HHHHHHHTSCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred ------------------HHHHHHHhCCHHHHHHHHHHHHhhhhccHHHHHHHHH
Confidence 3378999999999999999999877767777766654
|
| >2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-48 Score=383.54 Aligned_cols=242 Identities=21% Similarity=0.231 Sum_probs=198.8
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeC--------C-CCccccCCchhHhhc
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK--------G-RAFCAGGDVAAVVRG 78 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~--------g-~~F~aG~Dl~~~~~~ 78 (375)
++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++||+|||||. | ++||+|+|++++...
T Consensus 166 ~~~v~~e~~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~ 245 (440)
T 2np9_A 166 MEAVHLERRDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQG 245 (440)
T ss_dssp CSSEEEEEETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTT
T ss_pred CceEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhcc
Confidence 5679999999999999999999999999999999999999999999999999994 6 899999999998643
Q ss_pred cchh-h----HHHHHHHHHHHHH------------HhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccC
Q 017189 79 INEG-A----KFFSKEFILNYLM------------ATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALG 141 (375)
Q Consensus 79 ~~~~-~----~~~~~~~~l~~~i------------~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G 141 (375)
.... . .....+..++..+ ..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~lG 325 (440)
T 2np9_A 246 GISLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEG 325 (440)
T ss_dssp CCCTTTTHHHHHHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTTC
T ss_pred CcchhhhhhHHHHHHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhccC
Confidence 2111 1 1111223444433 479999999999999999999999999999999999999999999
Q ss_pred CCCCccHHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCC
Q 017189 142 LFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPY 220 (375)
Q Consensus 142 ~~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 220 (375)
++|++| +++|+|++| .++++|++||+.|+|+||+++||||+|||++++.. .+.
T Consensus 326 l~P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~--~a~----------------------- 379 (440)
T 2np9_A 326 IIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDA--AIE----------------------- 379 (440)
T ss_dssp CCCTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHH--HHH-----------------------
T ss_pred cCcchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHH--HHH-----------------------
Confidence 999887 689999999 67999999999999999999999999999877632 211
Q ss_pred CCcchhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHH---HHHHH
Q 017189 221 LKDHSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVG---QCLIR 297 (375)
Q Consensus 221 ~~~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~---~~l~~ 297 (375)
+.+++ .++.++..+|++++.... .++ +.+..
T Consensus 380 ------------------------------------------~~A~~---la~~Av~~~K~~l~~~~~-~~~~~~~~l~~ 413 (440)
T 2np9_A 380 ------------------------------------------RSLTR---LDGDAVLANRRMLNLADE-SPDGFRAYMAE 413 (440)
T ss_dssp ------------------------------------------HHHHT---TCSHHHHHHHHHHHHHHS-CHHHHHHHHHH
T ss_pred ------------------------------------------HHHHH---hCHHHHHHHHHHHHhhhc-chhHHHHHHHH
Confidence 11233 356899999999988754 443 45566
Q ss_pred HHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 298 EYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 298 e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
|...+..++.+ +|++||++|| ++|
T Consensus 414 e~~~~~~~~~s---~D~~Egv~AF-leK 437 (440)
T 2np9_A 414 FALMQALRLYG---HDVIDKVGRF-GGR 437 (440)
T ss_dssp HHHHHHHHHTC---HHHHHHHHTC-C--
T ss_pred HHHHHHHHhcC---HHHHHHHHHH-HhC
Confidence 66677777754 5999999999 588
|
| >3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-47 Score=397.95 Aligned_cols=275 Identities=20% Similarity=0.277 Sum_probs=215.3
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEF 90 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 90 (375)
..++.+|+|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||+|++||+|+||+++...... . .+.
T Consensus 23 ~~~~~~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~-~----~~~ 96 (742)
T 3zwc_A 23 EYLRLPHSLAMIRLCNPP-VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG-L----ALG 96 (742)
T ss_dssp EEEECSTTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSC-S----HHH
T ss_pred eEEEeeCCEEEEEeCCCc-ccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChh-H----HHH
Confidence 345668999999999997 6999999999999999999999999999999999999999999998654332 1 234
Q ss_pred HHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCc
Q 017189 91 ILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGAR 169 (375)
Q Consensus 91 ~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~ 169 (375)
.++.+|.+++|||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++| ..|++|++||+.
T Consensus 97 ~~~~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~~ 176 (742)
T 3zwc_A 97 SLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGKY 176 (742)
T ss_dssp HHHHHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCCC
T ss_pred HHHHHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCCc
Confidence 6778899999999999999999999999999999999999999999999999999999999999999 679999999999
Q ss_pred cCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHH
Q 017189 170 LDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSAL 249 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L 249 (375)
++|++|+++||||+|++++.++...+...+++...+...+. ..... ..........
T Consensus 177 i~a~eA~~~GLv~~vv~~d~~~~A~~~A~~ia~~~~~~~~~----~~~~~-----------------~~~~~~~~~~--- 232 (742)
T 3zwc_A 177 LSADEALRLGILDAVVKSDPVEEAIKFAQKIIDKPIEPRRI----FNKPV-----------------PSLPNMDSVF--- 232 (742)
T ss_dssp EEHHHHHHHTSCSEEESSCHHHHHHHHHHHHTTSCSGGGCG----GGSCC-----------------CCCTTHHHHH---
T ss_pred hhHHHHHHcCCccEecCchhhHHHHHHHHHHhcCCchhhhh----hcccc-----------------cccchhhhhH---
Confidence 99999999999999999876543222222222222111000 00000 0000001100
Q ss_pred hhcccccccHHHHHHHHHHHh--cCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCC
Q 017189 250 ESESTNRADAWISDAIQSLKK--ASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDK 327 (375)
Q Consensus 250 ~~~~~~~~~~~a~~~a~~i~~--~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r 327 (375)
.....++.+ ..+.+...++++++.+...+++++++.|.+.|..++.++ +.++++++||.++ +
T Consensus 233 ------------~~~~~~~~k~~~~~~A~~~~~~~v~~~~~~~~~~gl~~E~~~F~~l~~s~---~~k~~~~aFf~~r-~ 296 (742)
T 3zwc_A 233 ------------AEAIAKVRKQYPGVLAPETCVRSIQASVKHPYEVGIKEEEKLFMYLRASG---QAKALQYAFFAEK-S 296 (742)
T ss_dssp ------------HHHHHHHHHHSTTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSH---HHHHHHHHHHHHH-H
T ss_pred ------------HHHHHHHhhhccchhHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCCH---HHHHHHHHHHHHh-h
Confidence 111222222 234588889999999999999999999999999999765 9999999997443 3
Q ss_pred CCCC
Q 017189 328 NPKW 331 (375)
Q Consensus 328 ~P~w 331 (375)
..+|
T Consensus 297 ~~k~ 300 (742)
T 3zwc_A 297 ANKW 300 (742)
T ss_dssp TTSC
T ss_pred cccc
Confidence 3344
|
| >2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=397.30 Aligned_cols=289 Identities=18% Similarity=0.245 Sum_probs=219.0
Q ss_pred CCCCcEEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCC-CccccCCchhHhhccch--
Q 017189 6 SQEDQVLEE-ETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR-AFCAGGDVAAVVRGINE-- 81 (375)
Q Consensus 6 ~~~~~v~~~-~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~-~F~aG~Dl~~~~~~~~~-- 81 (375)
++++.+.++ .+++|++|||||| +.|+||.+|+.+|.++++.++.|+++|+||||| |+ +||+|+|++++......
T Consensus 4 ~~~~~i~~~~~~~~va~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~ 81 (725)
T 2wtb_A 4 RTKGKTVMEVGGDGVAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNV 81 (725)
T ss_dssp ---CEEEEEECTTSEEEEEEECT-TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC-----------
T ss_pred CcCCeEEEEEeeCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhh
Confidence 345578898 7899999999999 799999999999999999999999999999999 85 99999999988543211
Q ss_pred --hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H
Q 017189 82 --GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F 158 (375)
Q Consensus 82 --~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~ 158 (375)
...+...++.++.++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~ 161 (725)
T 2wtb_A 82 KEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLT 161 (725)
T ss_dssp -CCSSSHHHHHCCCCCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred hhHHHHHHHHHHHHHHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHH
Confidence 0123344556667788999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred HHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCC-cchhhhHHHHHHHHh
Q 017189 159 FGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLK-DHSAYHWMDVIDKCF 237 (375)
Q Consensus 159 ~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~f 237 (375)
+|++|++||+.++|+||+++||||+|||++++.....++. +.+.... .+.. ......
T Consensus 162 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a----------~~la~~~---~p~~~~~~~~~--------- 219 (725)
T 2wtb_A 162 KALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWA----------LDIVGRR---KPWVSSVSKTD--------- 219 (725)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHH----------HHHHTTS---SCCCCGGGCCT---------
T ss_pred HHHHHHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHH----------HHHHhcC---CChhhhhhhcc---------
Confidence 7999999999999999999999999999988844333221 1111110 0000 000000
Q ss_pred CcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhh
Q 017189 238 SRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEG 317 (375)
Q Consensus 238 ~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~eg 317 (375)
........... -+++.+.+++..+.+| +...+|++++.+...+++++++.|.+.+..++.+ +|++||
T Consensus 220 ~~~~~~~~~~~---------~~~a~~~~~~~~~g~p-A~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~s---~~~~~~ 286 (725)
T 2wtb_A 220 KLPPLGEAREI---------LTFAKAQTLKRAPNMK-HPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKL---DTTKGL 286 (725)
T ss_dssp TSCCHHHHHHH---------HHHHHHHHHHHCTTCC-HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTC---HHHHHH
T ss_pred ccCccchHHHH---------HHHHHHHHHHhccCCc-HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcc---hhHHHH
Confidence 00000000001 1244455666666665 6677999999998899999999999999999965 599999
Q ss_pred HhhhhccCCCCCCCCC
Q 017189 318 CRAILLDKDKNPKWKP 333 (375)
Q Consensus 318 v~A~l~ek~r~P~w~~ 333 (375)
+++|+ +| |.|++.+
T Consensus 287 ~~aF~-~k-r~~~~~~ 300 (725)
T 2wtb_A 287 IHVFF-SQ-RGTAKVP 300 (725)
T ss_dssp HHHHH-HH-HGGGCCT
T ss_pred HHHhh-hh-hhhcccC
Confidence 99995 88 6776554
|
| >1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-46 Score=390.78 Aligned_cols=286 Identities=17% Similarity=0.170 Sum_probs=219.0
Q ss_pred CcEEEE-EeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCC-CccccCCchhHhhcc--c--h
Q 017189 9 DQVLEE-ETSFVRILTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGR-AFCAGGDVAAVVRGI--N--E 81 (375)
Q Consensus 9 ~~v~~~-~~~~v~~itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~-~F~aG~Dl~~~~~~~--~--~ 81 (375)
..+.++ .+++|++||||||+ +.|+||.+|+.+|.++++.++.|+++|+||||| |+ +||+|+|++++.... . .
T Consensus 6 ~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~~ 84 (715)
T 1wdk_A 6 KAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDAE 84 (715)
T ss_dssp SSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHHH
T ss_pred CeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHHH
Confidence 458888 78999999999998 899999999999999999999999999999999 85 999999999986421 1 1
Q ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 82 GAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 82 ~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
...+...++.++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .++
T Consensus 85 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~A 164 (715)
T 1wdk_A 85 LIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNA 164 (715)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHHH
Confidence 1234456678889999999999999999999999999999999999999999999999999999999999999999 679
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHh-cCCCC-hHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYK-VNSSD-PAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFS 238 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~ 238 (375)
++|++||+.++|+||+++||||+|||++++.....++.+ +.... |-..+. +. .. .+.......+
T Consensus 165 ~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~---~~-~~-~p~~~~~~~~--------- 230 (715)
T 1wdk_A 165 VEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKR---QP-KL-EKLKLNAIEQ--------- 230 (715)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHH---GG-GG-SCCSCCHHHH---------
T ss_pred HHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhc---cc-cc-CccccCchhH---------
Confidence 999999999999999999999999998887543333311 11100 000000 00 00 0000000000
Q ss_pred cCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhH
Q 017189 239 RRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGC 318 (375)
Q Consensus 239 ~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv 318 (375)
...+. .+++.+.+-.+..-.+...+|++++.+...+++++++.|.+.+..++.++ |++||+
T Consensus 231 ----~~~~~------------~~k~~~~~~~~g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~s~---~~~~~~ 291 (715)
T 1wdk_A 231 ----MMAFE------------TAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS---ASNCLI 291 (715)
T ss_dssp ----HHHHH------------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSH---HHHHHH
T ss_pred ----HHHHH------------HHHHHHHHhcccCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcch---hHHHHH
Confidence 00000 11111222233323377888999999888899999999999999999754 999999
Q ss_pred hhhhccCCCCCC
Q 017189 319 RAILLDKDKNPK 330 (375)
Q Consensus 319 ~A~l~ek~r~P~ 330 (375)
++|+ +| |.|+
T Consensus 292 ~aF~-~k-r~~~ 301 (715)
T 1wdk_A 292 GLFL-ND-QELK 301 (715)
T ss_dssp HHHH-HH-HHHH
T ss_pred HHHH-hh-hhhh
Confidence 9995 77 5554
|
| >2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-43 Score=348.35 Aligned_cols=184 Identities=17% Similarity=0.221 Sum_probs=168.5
Q ss_pred CCcEEEEEeCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHhhcC-CCceEEEEee-CCCCccccCCchhH
Q 017189 8 EDQVLEEETSFVRILTLNRPR----------QLNALSAQMISRLLELFQRYETD-SNVKLLILKG-KGRAFCAGGDVAAV 75 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~----------~~Nal~~~~~~eL~~~l~~~~~d-~~vr~vVltg-~g~~F~aG~Dl~~~ 75 (375)
+..|.++++++|++||||||+ +.|+||.+|+.+|.++++.++.| +++|+||||| .|++||+|+|++++
T Consensus 20 ~~~v~ve~~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~el 99 (556)
T 2w3p_A 20 YKHWKLSFNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFML 99 (556)
T ss_dssp CSSEEEEEETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHHH
T ss_pred CceEEEEeeCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHHH
Confidence 567899999999999999998 89999999999999999999999 9999999999 88999999999998
Q ss_pred hhccchh-hHHHHHHHHHHHHH----HhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC--eEEeccccc-cCCCCCcc
Q 017189 76 VRGINEG-AKFFSKEFILNYLM----ATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN--SVFAMPETA-LGLFPDIG 147 (375)
Q Consensus 76 ~~~~~~~-~~~~~~~~~l~~~i----~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~-~G~~p~~g 147 (375)
....... ..+...+++++.+| .++||||||+|||+|+|||++|+++||+|||+++ ++|++||++ +|++|++|
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~Pg~G 179 (556)
T 2w3p_A 100 GLSTHAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLPGTG 179 (556)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCCTTT
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCCCcc
Confidence 6533221 33445566777888 9999999999999999999999999999999999 999999999 99999999
Q ss_pred HHHHHh--hcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHH
Q 017189 148 ASYFLS--RLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLA 191 (375)
Q Consensus 148 ~~~~l~--rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~ 191 (375)
++++|+ |++| .++++|++||+.++|+||+++||||+|||++++.
T Consensus 180 gt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~ 226 (556)
T 2w3p_A 180 GLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFD 226 (556)
T ss_dssp HHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHH
T ss_pred HHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHH
Confidence 999999 9999 6799999999999999999999999999987763
|
| >3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-22 Score=204.05 Aligned_cols=162 Identities=16% Similarity=0.103 Sum_probs=136.7
Q ss_pred EeCCEEEEEEcCCCCCCC--CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHH
Q 017189 15 ETSFVRILTLNRPRQLNA--LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFIL 92 (375)
Q Consensus 15 ~~~~v~~itlnrp~~~Na--l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l 92 (375)
.+++|++|+||+|...|+ ++..+.++|.++|+.++.|+++++|||++.+ .|+|+... ..+++.
T Consensus 299 ~~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~-----------~~i~~~ 363 (593)
T 3bf0_A 299 TGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTAS-----------EVIRAE 363 (593)
T ss_dssp CSCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHH-----------HHHHHH
T ss_pred CCCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHH-----------HHHHHH
Confidence 457899999999988888 6889999999999999999999999999974 57776542 233456
Q ss_pred HHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecccc------------ccCCCCCc-------------c
Q 017189 93 NYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET------------ALGLFPDI-------------G 147 (375)
Q Consensus 93 ~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~------------~~G~~p~~-------------g 147 (375)
+.++..++|||||+|+|.|.|||+.|+++||+|+|++++.|+.+++ ++|+.|+. +
T Consensus 364 i~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~~~ 443 (593)
T 3bf0_A 364 LAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSITRA 443 (593)
T ss_dssp HHHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTTSC
T ss_pred HHHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcCCC
Confidence 6778889999999999999999999999999999999999999885 68887643 2
Q ss_pred HH---------------HHHhhcch-HH-----HHHHhhcCCccCHHHHHHcCccceecCCccHH
Q 017189 148 AS---------------YFLSRLPG-FF-----GEYVGLTGARLDGAEMRACGLATHFVPSSRLA 191 (375)
Q Consensus 148 ~~---------------~~l~rl~g-~~-----a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~ 191 (375)
.+ ..+.+.++ .+ +.+++++|+.++|+||+++||||++++.+++.
T Consensus 444 ~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~ 508 (593)
T 3bf0_A 444 LPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAV 508 (593)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHH
Confidence 22 45566666 44 78899999999999999999999999877763
|
| >3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=166.46 Aligned_cols=161 Identities=19% Similarity=0.116 Sum_probs=122.1
Q ss_pred eCCEEEEEEcCCCCCCC-----CC--HHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHH
Q 017189 16 TSFVRILTLNRPRQLNA-----LS--AQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSK 88 (375)
Q Consensus 16 ~~~v~~itlnrp~~~Na-----l~--~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 88 (375)
+++|++|+++.+=..+. ++ .-.+.+|.++|+.+..|+++|+|||++. |.|+|+... ..
T Consensus 2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~-----------~~ 66 (240)
T 3rst_A 2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYES-----------AE 66 (240)
T ss_dssp CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHH-----------HH
T ss_pred CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHH-----------HH
Confidence 36788999987532221 10 0136899999999999999999999997 678887643 23
Q ss_pred HHHHHHHHHh-CCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEecc---------------------ccccCCCCCc
Q 017189 89 EFILNYLMAT-YTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMP---------------------ETALGLFPDI 146 (375)
Q Consensus 89 ~~~l~~~i~~-~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~p---------------------e~~~G~~p~~ 146 (375)
+++.+..+.. ++|||||+|+|.|.|||+.|+++||+|||++++.|+.+ +++.|-+++.
T Consensus 67 i~~~l~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~k~~ 146 (240)
T 3rst_A 67 IHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAHADI 146 (240)
T ss_dssp HHHHHHHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTTTTT
T ss_pred HHHHHHHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEeccccccc
Confidence 4455666776 89999999999999999999999999999999999999 6677777766
Q ss_pred cHHH--------------------------HHhhcchHHHHHHhhcCCccCHHHHHHcCccceecCCccHH
Q 017189 147 GASY--------------------------FLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPSSRLA 191 (375)
Q Consensus 147 g~~~--------------------------~l~rl~g~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~ 191 (375)
+..+ .-.|-+......-+++|+.++|++|+++||||++.+.+++.
T Consensus 147 ~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~~~~g~~~~a~~A~~~GLVD~i~~~~~~~ 217 (240)
T 3rst_A 147 MSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKKIADGRVYDGRQAKKLNLVDELGFYDDTI 217 (240)
T ss_dssp TCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHCSSCEEEHHHHHHTTSSSEECCHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHHH
Confidence 5321 11222332223347899999999999999999999876653
|
| >3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A | Back alignment and structure |
|---|
Probab=99.79 E-value=8.2e-19 Score=160.04 Aligned_cols=147 Identities=13% Similarity=0.168 Sum_probs=123.2
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL 95 (375)
Q Consensus 16 ~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~ 95 (375)
.+.|++|+++. +++..+...|.++|+.++++ ++++|||+.. |.|+|+... ..++..
T Consensus 7 ~~~V~vI~i~g-----~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~~--------------~~i~~~ 62 (230)
T 3viv_A 7 KNIVYVAQIKG-----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAM--------------MNIVQR 62 (230)
T ss_dssp CCEEEEEEEES-----CBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHHH--------------HHHHHH
T ss_pred CCeEEEEEEeC-----EECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHHH--------------HHHHHH
Confidence 35799999984 69999999999999999874 6999999986 777776432 245567
Q ss_pred HHhCCCcEEEEE---ccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHH---------------HHHhhcch
Q 017189 96 MATYTKPQVSIL---NGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGAS---------------YFLSRLPG 157 (375)
Q Consensus 96 i~~~~kPvIAav---nG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~---------------~~l~rl~g 157 (375)
|..++||||++| +|.|.|+|+.|+++||+++|+++++|+.+++..+. |..|.+ ..+++..|
T Consensus 63 i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~~G 141 (230)
T 3viv_A 63 IQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQESG 141 (230)
T ss_dssp HHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHHTT
T ss_pred HHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHHhC
Confidence 788999999999 99999999999999999999999999999987533 444431 24666777
Q ss_pred ---HHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 158 ---FFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 158 ---~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
..+..++.++..++|+||+++||||+++++
T Consensus 142 r~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~ 174 (230)
T 3viv_A 142 RNATIAEEFITKDLSLTPEEALKYGVIEVVARD 174 (230)
T ss_dssp CCHHHHHHHHHTCCEECHHHHHHTTSCSEECSS
T ss_pred cCHHHHHHHHhcCCeecHHHHHHcCCceEecCC
Confidence 358999999999999999999999999986
|
| >2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 | Back alignment and structure |
|---|
Probab=99.59 E-value=8.2e-15 Score=139.01 Aligned_cols=144 Identities=13% Similarity=0.165 Sum_probs=114.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHH--
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLM-- 96 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i-- 96 (375)
|..+..+..-..|+++..+...+.++++.+.++ ++.+|+|+++| |+|+.+... . ...+.+++..+
T Consensus 120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~------~-l~~~~~i~~al~~ 186 (304)
T 2f9y_B 120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALM------S-LMQMAKTSAALAK 186 (304)
T ss_dssp CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHH------H-HHHHHHHHHHHHH
T ss_pred EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHH------H-HHHHHHHHHHHHH
Confidence 345555555578999999999999999999998 89999999977 777755321 1 12233444555
Q ss_pred -HhCCCcEEEEEccccchhh-hhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHH
Q 017189 97 -ATYTKPQVSILNGIVMGGG-AGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAE 174 (375)
Q Consensus 97 -~~~~kPvIAavnG~a~GgG-~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~e 174 (375)
...++|+|++|+|.|.||| +.++++||++||.++|+|++. +...+.+.+|.. ++++..+|++
T Consensus 187 ~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~-----l~~~~~~Ae~ 250 (304)
T 2f9y_B 187 MQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK-----LPPGFQRSEF 250 (304)
T ss_dssp HHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC-----CCTTTTBHHH
T ss_pred HhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc-----CCcccCCHHH
Confidence 4459999999999999999 778999999999999999986 455667766632 5789999999
Q ss_pred HHHcCccceecCCccHH
Q 017189 175 MRACGLATHFVPSSRLA 191 (375)
Q Consensus 175 A~~~GLv~~vv~~~~l~ 191 (375)
+.++|+||.|++++++.
T Consensus 251 ~~~~Glvd~Vv~~~el~ 267 (304)
T 2f9y_B 251 LIEKGAIDMIVRRPEMR 267 (304)
T ss_dssp HGGGTCCSEECCHHHHH
T ss_pred HHhcCCccEEeCcHHHH
Confidence 99999999999987653
|
| >1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=131.43 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=107.3
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+..+|.+.|..++.|+.++.|+|.- .|.|+++.. ...++..|..+++||++.|+|.|.
T Consensus 54 I~~~~a~~i~~~L~~l~~~~~~k~I~l~I----nSPGG~v~a--------------g~~I~~~i~~~~~pV~t~v~G~Aa 115 (218)
T 1y7o_A 54 VEDNMANSVIAQLLFLDAQDSTKDIYLYV----NTPGGSVSA--------------GLAIVDTMNFIKADVQTIVMGMAA 115 (218)
T ss_dssp BCHHHHHHHHHHHHHHHHHCTTSCEEEEE----EECCBCHHH--------------HHHHHHHHHHSSSCEEEEEEEEEE
T ss_pred ECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECcCCCHHH--------------HHHHHHHHHhcCCCEEEEEccEeH
Confidence 88999999999999999887778877763 344544321 122445677789999999999999
Q ss_pred hhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccH------------------HHHHhhcch-H--HHHHHhhcCCc
Q 017189 113 GGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGA------------------SYFLSRLPG-F--FGEYVGLTGAR 169 (375)
Q Consensus 113 GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~------------------~~~l~rl~g-~--~a~~l~ltG~~ 169 (375)
++|+.|+++||. |+|.++++|++++.. |.+|..|. ...+++..| . .+..++.+|..
T Consensus 116 S~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~~~~~ 194 (218)
T 1y7o_A 116 SMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDNW 194 (218)
T ss_dssp THHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCCC
T ss_pred HHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCCE
Confidence 999999999999 999999999999987 44443332 245666667 2 57888899999
Q ss_pred cCHHHHHHcCccceecCCcc
Q 017189 170 LDGAEMRACGLATHFVPSSR 189 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~ 189 (375)
++|+||+++||||+++++++
T Consensus 195 ~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 195 MSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp BCHHHHHHHTSCSEECCCC-
T ss_pred EcHHHHHHCCCCcEEcCcCC
Confidence 99999999999999998865
|
| >2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.3e-13 Score=130.19 Aligned_cols=152 Identities=13% Similarity=0.096 Sum_probs=109.2
Q ss_pred eCCEEEEEEcCCC---------CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHH
Q 017189 16 TSFVRILTLNRPR---------QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFF 86 (375)
Q Consensus 16 ~~~v~~itlnrp~---------~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 86 (375)
.|.-..|.-|.+. ..++++++....+.+.++.+++.. +-+|.|.-.++++. |..... ....
T Consensus 115 ~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~Ga~~-g~~ae~--------~g~~ 184 (327)
T 2f9i_A 115 NGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTKGAYP-GKAAEE--------RGQS 184 (327)
T ss_dssp TTEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-CHHHHH--------TTHH
T ss_pred CCEEEEEEEEcCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCCc-chhhhh--------hhhH
Confidence 4444445556654 347899999999999999998865 45555554433332 221111 1123
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
.....++..+..+++|+|++|+|.|.|||+.++++||++||.++++|++ +.|.++++.++.+..+ ..+.++
T Consensus 185 ~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~-- 256 (327)
T 2f9i_A 185 ESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET-- 256 (327)
T ss_dssp HHHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH--
T ss_pred HHHHHHHHHHHhCCCCEEEEEECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH--
Confidence 3455677788999999999999999999999999999999999999885 3455555544444444 446655
Q ss_pred cCCccCHHHHHHcCccceecCC
Q 017189 166 TGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~ 187 (375)
..++|++|.++|+||+|++.
T Consensus 257 --~~itA~~a~~~GlVd~VV~e 276 (327)
T 2f9i_A 257 --MKITAHDIKQLGIIDDVISE 276 (327)
T ss_dssp --HTCBHHHHHHTTSSSEEECC
T ss_pred --cCCCHHHHHHcCCceEEecC
Confidence 77999999999999999984
|
| >2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 | Back alignment and structure |
|---|
Probab=99.49 E-value=4.1e-13 Score=128.94 Aligned_cols=138 Identities=14% Similarity=0.071 Sum_probs=107.0
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 30 LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 30 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
.++++++....+.++++.+++.. +-+|.|.-.++++. |..... .........++..+..+++|+|++|+|
T Consensus 152 ~G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~Ga~~-g~~aE~--------~g~~~~~a~~l~al~~~~vPvIavV~G 221 (339)
T 2f9y_A 152 FGMPAPEGYRKALRLMQMAERFK-MPIITFIDTPGAYP-GVGAEE--------RGQSEAIARNLREMSRLGVPVVCTVIG 221 (339)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-SHHHHH--------TTHHHHHHHHHHHHHTCSSCEEEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCcc-chHHHH--------HHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 47899999999999999998764 45555554443332 221111 112344556777889999999999999
Q ss_pred ccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 110 IVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 110 ~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
.|.|||+.++++||++||.++++|++ +.|.++++.++.+..+ ..+.++ ..++|++|.++|+||+||+.
T Consensus 222 ~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~e 290 (339)
T 2f9y_A 222 EGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIPE 290 (339)
T ss_dssp EEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCCC
T ss_pred CcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEecC
Confidence 99999999999999999999999996 4677777777777666 556666 67999999999999999984
|
| >2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A | Back alignment and structure |
|---|
Probab=98.97 E-value=4.4e-09 Score=94.42 Aligned_cols=138 Identities=16% Similarity=0.133 Sum_probs=97.1
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+...+.+.|..++.++.++.|+|.=. |.|+++. ....++..|..+++||++.|.|.|.
T Consensus 36 I~~~~a~~i~~~L~~~~~~~~~k~I~l~In----SPGG~v~--------------a~~~I~~~i~~~~~pV~~~v~g~Aa 97 (208)
T 2cby_A 36 VNDEIANRLCAQILLLAAEDASKDISLYIN----SPGGSIS--------------AGMAIYDTMVLAPCDIATYAMGMAA 97 (208)
T ss_dssp BCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH--------------HHHHHHHHHHHCSSCEEEEEEEEEE
T ss_pred ECHHHHHHHHHHHHHHHhCCCCCCEEEEEE----CCCCCHH--------------HHHHHHHHHHhcCCCEEEEECcEeH
Confidence 788999999999999987766676665421 2233221 1123455677789999999999999
Q ss_pred hhhhhhhhcCCE--EEEeCCeEEeccccccCCCC---CccH------------HHHHhhcch-H--HHHHHhhcCCccCH
Q 017189 113 GGGAGVSIHGRF--RVATENSVFAMPETALGLFP---DIGA------------SYFLSRLPG-F--FGEYVGLTGARLDG 172 (375)
Q Consensus 113 GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p---~~g~------------~~~l~rl~g-~--~a~~l~ltG~~i~A 172 (375)
++|..++++||. |+|.+++.+++....-|... +... ...+.+..| . ....++..|..++|
T Consensus 98 S~g~~Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~~ta 177 (208)
T 2cby_A 98 SMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTA 177 (208)
T ss_dssp THHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEEEH
T ss_pred HHHHHHHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCcEEcH
Confidence 999999999998 99999999998776433210 0000 011233334 2 24557788999999
Q ss_pred HHHHHcCccceecCCc
Q 017189 173 AEMRACGLATHFVPSS 188 (375)
Q Consensus 173 ~eA~~~GLv~~vv~~~ 188 (375)
+||+++||||++.+..
T Consensus 178 ~eA~e~GLvD~i~~~~ 193 (208)
T 2cby_A 178 AEALEYGFVDHIITRA 193 (208)
T ss_dssp HHHHHHTSCSEECSCC
T ss_pred HHHHHcCCCcEecCch
Confidence 9999999999999763
|
| >2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=98.67 E-value=2e-06 Score=86.53 Aligned_cols=174 Identities=13% Similarity=0.140 Sum_probs=127.9
Q ss_pred EEEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHhhc-CCCceEEEEeeCCCCccccCCchhHhh
Q 017189 12 LEEETSFVRILTLNRPRQL-------------NALSAQMISRLLELFQRYET-DSNVKLLILKGKGRAFCAGGDVAAVVR 77 (375)
Q Consensus 12 ~~~~~~~v~~itlnrp~~~-------------Nal~~~~~~eL~~~l~~~~~-d~~vr~vVltg~g~~F~aG~Dl~~~~~ 77 (375)
.+++..+++.++...|... +.....|..||.+++..+.. +.++...++...|+. ..+..
T Consensus 271 ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g~~-------~~~~~ 343 (556)
T 2w3p_A 271 TIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDA-------RHLLA 343 (556)
T ss_dssp EEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEESCH-------HHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccCCH-------HHHhh
Confidence 3455678888898876531 33456688999888877764 568999998887743 22221
Q ss_pred c------cchh---hHHHHHHHHHHHHHHhCCCcEEEEEc-cccchhh-hhhhhcCCEEEEeC-------CeEEeccccc
Q 017189 78 G------INEG---AKFFSKEFILNYLMATYTKPQVSILN-GIVMGGG-AGVSIHGRFRVATE-------NSVFAMPETA 139 (375)
Q Consensus 78 ~------~~~~---~~~~~~~~~l~~~i~~~~kPvIAavn-G~a~GgG-~~Lala~D~ria~~-------~a~f~~pe~~ 139 (375)
. ..+. .+....+.+.+.++.-.+.-++|.|. |.|+.|- ++|+++||..++-+ .+.+.+.+.+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (556)
T 2w3p_A 344 ADASLMQHKDHWFVRETIGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPAITLSEVN 423 (556)
T ss_dssp HHHHHHHTTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCCEECCGGG
T ss_pred hHHHHHhccchHHHHHHHHHHHHHHHHhcccchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCceeEeeccc
Confidence 1 1111 33344456677778888999999997 9998876 48999999999853 4789999999
Q ss_pred cCCCCCccHHHHHhhcc-h-H--HHHHHhhcCCccCHHHHHHcCccceecCCccHHH
Q 017189 140 LGLFPDIGASYFLSRLP-G-F--FGEYVGLTGARLDGAEMRACGLATHFVPSSRLAL 192 (375)
Q Consensus 140 ~G~~p~~g~~~~l~rl~-g-~--~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~ 192 (375)
+|.+|-..+..+|.+.. | . ...--...|+++++++|.++|||+...++-++++
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (556)
T 2w3p_A 424 FGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWAD 480 (556)
T ss_dssp GTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHH
T ss_pred cCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHH
Confidence 99999887766776654 4 2 2333456799999999999999999998877754
|
| >3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A | Back alignment and structure |
|---|
Probab=98.61 E-value=5.3e-07 Score=80.36 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=95.6
Q ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcccc
Q 017189 32 ALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIV 111 (375)
Q Consensus 32 al~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a 111 (375)
.++..+...+.+.|..++.++..+.|+|.=. |.|+++. ....+...|..+++||++.+.|.|
T Consensus 35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~--------------~~~~I~~~i~~~~~~V~t~~~G~A 96 (203)
T 3qwd_A 35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYIN----SPGGSVT--------------AGFAIYDTIQHIKPDVQTICIGMA 96 (203)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH--------------HHHHHHHHHHHSSSCEEEEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEe----CCCCCHH--------------HHHHHHHHHHHhcCCcEEEEeeee
Confidence 3899999999999999987766665554321 2233321 112345567778999999999999
Q ss_pred chhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccHH----H-----------HHhhcch-H--HHHHHhhcCCccC
Q 017189 112 MGGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGAS----Y-----------FLSRLPG-F--FGEYVGLTGARLD 171 (375)
Q Consensus 112 ~GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~~----~-----------~l~rl~g-~--~a~~l~ltG~~i~ 171 (375)
.++|..|+++|| .|++.++++|.+....-|..-...-. . .+....| . ....++-...-++
T Consensus 97 aSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~d~~lt 176 (203)
T 3qwd_A 97 ASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLT 176 (203)
T ss_dssp ETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTSCCCEE
T ss_pred hhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhcCceec
Confidence 999999999999 69999999999866543321100000 0 1112223 1 2444555556699
Q ss_pred HHHHHHcCccceecCCcc
Q 017189 172 GAEMRACGLATHFVPSSR 189 (375)
Q Consensus 172 A~eA~~~GLv~~vv~~~~ 189 (375)
|+||+++||||+|+.+..
T Consensus 177 a~EA~e~GliD~I~~~~~ 194 (203)
T 3qwd_A 177 AEEAKEYGLIDEVMVPET 194 (203)
T ss_dssp HHHHHHHTSCSEECCCCC
T ss_pred HHHHHHcCCcCEecCCcc
Confidence 999999999999998753
|
| >1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.8e-07 Score=82.82 Aligned_cols=134 Identities=17% Similarity=0.120 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+...+.+.|..++.++..+.|+|.=. |-|+++. ....++..|..+++||++.+.|.|.
T Consensus 35 I~~~~a~~i~~~L~~l~~~~~~~~I~l~In----SPGG~v~--------------a~~~I~~~i~~~~~pV~~~v~g~Aa 96 (193)
T 1yg6_A 35 VEDHMANLIVAQMLFLEAENPEKDIYLYIN----SPGGVIT--------------AGMSIYDTMQFIKPDVSTICMGQAA 96 (193)
T ss_dssp BCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH--------------HHHHHHHHHHHSSSCEEEEEEEEEE
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CcCCCHH--------------HHHHHHHHHHhcCCCEEEEEeeeHH
Confidence 788999999999999887766777666522 2233321 1123455677788999999999999
Q ss_pred hhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHH-H-----------------HHhhcch-H--HHHHHhhcCCc
Q 017189 113 GGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGAS-Y-----------------FLSRLPG-F--FGEYVGLTGAR 169 (375)
Q Consensus 113 GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~-~-----------------~l~rl~g-~--~a~~l~ltG~~ 169 (375)
.+|.-++++||. |+|.+++.+++.....|. .|-. - .+.+..| . ....++-.+.-
T Consensus 97 S~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~~ 173 (193)
T 1yg6_A 97 SMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY---QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRF 173 (193)
T ss_dssp THHHHHHHTSCTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEE
T ss_pred HHHHHHHHCCCcCcEEEecCcEEEEEeccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCeE
Confidence 999999999999 999999998876654332 1110 0 0111123 1 23334334455
Q ss_pred cCHHHHHHcCccceecCC
Q 017189 170 LDGAEMRACGLATHFVPS 187 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~ 187 (375)
++|+||+++||||+++++
T Consensus 174 ~ta~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 174 LSAPEAVEYGLVDSILTH 191 (193)
T ss_dssp EEHHHHHHHTSSSEECCC
T ss_pred EcHHHHHHcCCCCEecCC
Confidence 799999999999999875
|
| >2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1 | Back alignment and structure |
|---|
Probab=98.56 E-value=1.1e-06 Score=79.14 Aligned_cols=137 Identities=12% Similarity=0.150 Sum_probs=90.5
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+...+.+.|..++.++. +.|+|.=. |-|+++. ....++..|...++||++.+.|.|.
T Consensus 48 I~~~~a~~i~~~L~~l~~~~~-k~I~l~IN----SPGGsv~--------------a~~~I~~~i~~~~~pV~t~v~g~AA 108 (215)
T 2f6i_A 48 INKKTADELISQLLYLDNINH-NDIKIYIN----SPGGSIN--------------EGLAILDIFNYIKSDIQTISFGLVA 108 (215)
T ss_dssp BCHHHHHHHHHHHHHHHHHCC-SCEEEEEE----ECCBCHH--------------HHHHHHHHHHHSSSCEEEEEEEEEC
T ss_pred ECHHHHHHHHHHHHHHHhCCC-CcEEEEEE----CCCCCHH--------------HHHHHHHHHHhcCCCEEEEEeeEhH
Confidence 788899999999998876554 66555421 2233321 1123455677788999999999999
Q ss_pred hhhhhhhhcCCE--EEEeCCeEEeccccccCCC---CCccH----HH--------HHhhcch---HHHHHHhhcCCccCH
Q 017189 113 GGGAGVSIHGRF--RVATENSVFAMPETALGLF---PDIGA----SY--------FLSRLPG---FFGEYVGLTGARLDG 172 (375)
Q Consensus 113 GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~---p~~g~----~~--------~l~rl~g---~~a~~l~ltG~~i~A 172 (375)
.+|.-++++||. |+|.+++.+++.....|.. .+... .. .+.+..| .....++-.+.-++|
T Consensus 109 S~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~~~~lta 188 (215)
T 2f6i_A 109 SMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNA 188 (215)
T ss_dssp HHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEECH
T ss_pred hHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhCCeecCH
Confidence 999999999999 9999999998766543321 11110 00 0111112 123334333445799
Q ss_pred HHHHHcCccceecCCc
Q 017189 173 AEMRACGLATHFVPSS 188 (375)
Q Consensus 173 ~eA~~~GLv~~vv~~~ 188 (375)
+||+++||||++.++.
T Consensus 189 ~eA~e~GLiD~I~~~~ 204 (215)
T 2f6i_A 189 LEAKQYGIIDEVIETK 204 (215)
T ss_dssp HHHHHHTSCSEECCCS
T ss_pred HHHHHCCCCCEecCCc
Confidence 9999999999999763
|
| >3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1 | Back alignment and structure |
|---|
Probab=98.43 E-value=9.5e-07 Score=78.60 Aligned_cols=134 Identities=16% Similarity=0.099 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+...+...|..++.++..+.|+|.=. |.|+++. ....++..|...++||++.+.|.|.
T Consensus 39 I~~~~a~~i~~~L~~l~~~~~~~~I~l~IN----SpGG~v~--------------~~~~I~~~i~~~~~~v~t~~~G~Aa 100 (201)
T 3p2l_A 39 VNDHSANLVIAQLLFLESEDPDKDIYFYIN----SPGGMVT--------------AGMGVYDTMQFIKPDVSTICIGLAA 100 (201)
T ss_dssp BCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH--------------HHHHHHHHHHHSSSCEEEEEEEEEE
T ss_pred ECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHH--------------HHHHHHHHHHHhCCCeEEEEcCEeh
Confidence 789999999999999987665665555421 2233321 1123455677788999999999999
Q ss_pred hhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHHH-------HH-----------hhcch-H--HHHHHhhcCCc
Q 017189 113 GGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGASY-------FL-----------SRLPG-F--FGEYVGLTGAR 169 (375)
Q Consensus 113 GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~~-------~l-----------~rl~g-~--~a~~l~ltG~~ 169 (375)
.+|.-+++++|. |++.+++++.+....-|. .|-.. .+ .+..| . ....++-...-
T Consensus 101 S~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~~~~~~ 177 (201)
T 3p2l_A 101 SMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNF 177 (201)
T ss_dssp THHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEE
T ss_pred hHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhhcCee
Confidence 999999999998 999999999877664332 11110 01 11113 1 23344333344
Q ss_pred cCHHHHHHcCccceecCC
Q 017189 170 LDGAEMRACGLATHFVPS 187 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~ 187 (375)
++|+||+++||||+++++
T Consensus 178 lta~EA~e~GliD~I~~~ 195 (201)
T 3p2l_A 178 MMADEAKAYGLIDHVIES 195 (201)
T ss_dssp EEHHHHHHHTSCSEECCC
T ss_pred ecHHHHHHcCCccEecCC
Confidence 799999999999999976
|
| >1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1 | Back alignment and structure |
|---|
Probab=98.42 E-value=2.6e-06 Score=79.15 Aligned_cols=138 Identities=14% Similarity=0.088 Sum_probs=92.3
Q ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccc
Q 017189 33 LSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVM 112 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~ 112 (375)
++..+...+...|..++.++..+.|+|.=. |-|+++. ....++..|...++||++.|.|.|.
T Consensus 91 I~d~~a~~iiaqL~~l~~ed~~k~I~L~IN----SPGGsV~--------------ag~aIyd~I~~~k~pV~t~v~G~AA 152 (277)
T 1tg6_A 91 IDDSVASLVIAQLLFLQSESNKKPIHMYIN----SPGGVVT--------------AGLAIYDTMQYILNPICTWCVGQAA 152 (277)
T ss_dssp BCHHHHHHHHHHHHHHHHHCSSSCEEEEEE----ECCBCHH--------------HHHHHHHHHHHSCSCEEEEEEEEEE
T ss_pred ECHHHHHHHHHHHHHHHhcCCCCCEEEEEE----CCCCCHH--------------HHHHHHHHHHhcCCCEEEEEccEeH
Confidence 788899999999998876544576666421 2233321 1123445577788999999999999
Q ss_pred hhhhhhhhcCCE--EEEeCCeEEeccccccCCCCCccHHH---------------HHhhcch---HHHHHHhhcCCccCH
Q 017189 113 GGGAGVSIHGRF--RVATENSVFAMPETALGLFPDIGASY---------------FLSRLPG---FFGEYVGLTGARLDG 172 (375)
Q Consensus 113 GgG~~Lala~D~--ria~~~a~f~~pe~~~G~~p~~g~~~---------------~l~rl~g---~~a~~l~ltG~~i~A 172 (375)
.+|.-|+++||. |+|.+++.++.....-|......-.. .+....| .....++-.+.-++|
T Consensus 153 SaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~drd~~lta 232 (277)
T 1tg6_A 153 SMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSP 232 (277)
T ss_dssp THHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSCEEECH
T ss_pred HHHHHHHHCCCcCCEEEecCCEEEEecccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcccCH
Confidence 999999999998 99999999987665433211000000 0111112 123444444556799
Q ss_pred HHHHHcCccceecCCc
Q 017189 173 AEMRACGLATHFVPSS 188 (375)
Q Consensus 173 ~eA~~~GLv~~vv~~~ 188 (375)
+||+++||||+++...
T Consensus 233 ~EAle~GLID~I~~~~ 248 (277)
T 1tg6_A 233 MEAQEFGILDKVLVHP 248 (277)
T ss_dssp HHHHHHTSCSEECSSC
T ss_pred HHHHHCCCCCEecCcc
Confidence 9999999999999764
|
| >4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A | Back alignment and structure |
|---|
Probab=98.04 E-value=7e-05 Score=66.49 Aligned_cols=142 Identities=13% Similarity=0.119 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHHHHhhcCCCce--EEEEeeCCCCc----cccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEE
Q 017189 33 LSAQMISRLLELFQRYETDSNVK--LLILKGKGRAF----CAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSI 106 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~vr--~vVltg~g~~F----~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAa 106 (375)
++.++...+...|..++.++..+ .|.|.+.|..- -.-+| ......++..|...+.||...
T Consensus 37 I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~--------------v~aglaIyd~m~~~~~~V~t~ 102 (205)
T 4gm2_A 37 IYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNG--------------ITDVISIVDVINYISSDVYTY 102 (205)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTH--------------HHHHHHHHHHHHHSSSCEEEE
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCC--------------HHHHHHHHHHHHhcCCCEEEE
Confidence 89999999999999988543223 33344444110 00011 112234556677789999999
Q ss_pred EccccchhhhhhhhcCC--EEEEeCCeEEeccccccCC----CCCcc------------HHHHHhhcch-H--HHHHHhh
Q 017189 107 LNGIVMGGGAGVSIHGR--FRVATENSVFAMPETALGL----FPDIG------------ASYFLSRLPG-F--FGEYVGL 165 (375)
Q Consensus 107 vnG~a~GgG~~Lala~D--~ria~~~a~f~~pe~~~G~----~p~~g------------~~~~l~rl~g-~--~a~~l~l 165 (375)
+-|.|.+.|..|++++| .|++.+++++.+....-|. ..+.- ....+.+..| . ....++-
T Consensus 103 ~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~m~ 182 (205)
T 4gm2_A 103 CLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVISNVLE 182 (205)
T ss_dssp EEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHTT
T ss_pred EEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc
Confidence 99999999999999999 5999999999876665443 11110 0001111112 1 1344444
Q ss_pred cCCccCHHHHHHcCccceecCCc
Q 017189 166 TGARLDGAEMRACGLATHFVPSS 188 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~ 188 (375)
...-++|+||+++||||+|++++
T Consensus 183 rd~~msa~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 183 RDKYFNADEAVDFKLIDHILEKE 205 (205)
T ss_dssp SCEEEEHHHHHHTTSCSEECCC-
T ss_pred CCcccCHHHHHHcCCccEeecCC
Confidence 45569999999999999999763
|
| >3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A | Back alignment and structure |
|---|
Probab=97.90 E-value=9e-05 Score=76.39 Aligned_cols=87 Identities=11% Similarity=0.043 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHhhcCCCceEEEEeeCCCCcccc-CCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccccchhh
Q 017189 37 MISRLLELFQRYETDSNVKLLILKGKGRAFCAG-GDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGG 115 (375)
Q Consensus 37 ~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG 115 (375)
...++.+.|+.+..|+.++.|+|.-. |.| +++... ..+++.+..+....|||||.+++ +.-+|
T Consensus 71 ~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~-----------~~I~~~i~~~k~~gkpvva~~~~-aas~~ 134 (593)
T 3bf0_A 71 SLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSM-----------QYIGKALKEFRDSGKPVYAVGEN-YSQGQ 134 (593)
T ss_dssp EHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHH-----------HHHHHHHHHHHHTTCCEEEEESC-EEHHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHH-----------HHHHHHHHHHHhcCCeEEEEEcc-chhHH
Confidence 46788999999999999999999864 233 444322 34455566666667999999876 45678
Q ss_pred hhhhhcCCEEEEeCCeEEeccccc
Q 017189 116 AGVSIHGRFRVATENSVFAMPETA 139 (375)
Q Consensus 116 ~~Lala~D~ria~~~a~f~~pe~~ 139 (375)
+-|+.+||.+++.+.+.++...+.
T Consensus 135 y~lAsaad~i~~~P~~~vg~~g~~ 158 (593)
T 3bf0_A 135 YYLASFANKIWLSPQGVVDLHGFA 158 (593)
T ss_dssp HHHHTTSSEEEECTTCCEECCCCB
T ss_pred HHHHHhCCEEEECCCceEEEeccc
Confidence 999999999999999988876664
|
| >1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 | Back alignment and structure |
|---|
Probab=97.89 E-value=7.5e-05 Score=76.39 Aligned_cols=154 Identities=12% Similarity=0.079 Sum_probs=99.5
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
..+..+..-..-++.....+.+.++++.+.+.. +-+|.|.-+ +|+.+.+-.........+ .........+...
T Consensus 108 ~v~a~D~t~~gGs~g~~~~~Ki~r~~e~A~~~~-lPvI~l~dS-----gGArlqe~~~~l~~~~~~-g~i~~~~~~ls~~ 180 (587)
T 1pix_A 108 VVVASDNKKLAGAWVPGQAECLLRASDTAKTLH-VPLVYVLNC-----SGVKFDEQEKVYPNRRGG-GTPFFRNAELNQL 180 (587)
T ss_dssp EEEEECTTTTTTEECTTHHHHHHHHHHHHHHHT-CCEEEEECC-----CEECGGGHHHHSSSTTST-THHHHHHHHHHHT
T ss_pred EEEEECCccccCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeC-----CCCCccccchhccccccH-HHHHHHHHHHhCC
Confidence 333444444566889999999999999888764 556666653 444443321110000001 1222334556778
Q ss_pred CCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEecccc--ccCCCCCccHHHHHhhcch-HHHHHHh-hcCCccCHHH
Q 017189 100 TKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPET--ALGLFPDIGASYFLSRLPG-FFGEYVG-LTGARLDGAE 174 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~--~~G~~p~~g~~~~l~rl~g-~~a~~l~-ltG~~i~A~e 174 (375)
..|+|++|.|.|.|||... ..||++|+.++ +.+++.-. --++-|- - .++ ..|.+++ .||+.+++++
T Consensus 181 giP~Isvv~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~vi~~~~~~-------~-~~d~~~A~el~~~tge~v~~e~ 251 (587)
T 1pix_A 181 GIPVIVGIYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAGIMGGMNPK-------G-HVDLEYANEIADMVDRTGKTEP 251 (587)
T ss_dssp TCCEEEEECSEEETHHHHH-HHSSSEEEEETTCEEESCCCTTCCSCCSS-------S-SCCHHHHHHHHHHHHTTCCCCC
T ss_pred CCCEEEEEecCCcHHHHHH-HhcCceEEecCCcEEEecCHHHHhhhccc-------c-ccchhHHHHHHHHhCCccChhh
Confidence 8999999999999999988 88999988875 88776222 1111000 0 134 5688888 8998887654
Q ss_pred -----HH--HcCccceecCCcc
Q 017189 175 -----MR--ACGLATHFVPSSR 189 (375)
Q Consensus 175 -----A~--~~GLv~~vv~~~~ 189 (375)
.+ +.|++|.++++++
T Consensus 252 lgga~~h~~~~GvvD~vv~~e~ 273 (587)
T 1pix_A 252 PGAVDIHYTETGFMREVYASEE 273 (587)
T ss_dssp SSBHHHHTTTSCCSCEEESSHH
T ss_pred cccHHHHHhhcCceeEecCCHH
Confidence 33 5899999999865
|
| >2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.81 E-value=0.001 Score=62.09 Aligned_cols=146 Identities=8% Similarity=0.090 Sum_probs=92.6
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
+++..|..-..-+++....+.+.++++.+.+. .+-+|.|.-+|++. ..+ .... ..........+.++...
T Consensus 124 ~v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~-~lPlI~l~dsgGar-----~qE---Gi~s-l~q~aki~~~l~~~s~~ 193 (285)
T 2f9i_B 124 GVAVMDSRFRMGSMGSVIGEKICRIIDYCTEN-RLPFILFSASGGAR-----MQE---GIIS-LMQMGKTSVSLKRHSDA 193 (285)
T ss_dssp EEEEECTTTGGGCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEECSCC-----GGG---HHHH-HHHHHHHHHHHHHHHHT
T ss_pred EEEEEccccccCcCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcc-----hhh---hhhh-HhHHHHHHHHHHHHHcC
Confidence 33333333345789999999999999998886 46677777655431 111 0000 01123334455666678
Q ss_pred CCcEEEEEccccchhhhh-hhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHHHHc
Q 017189 100 TKPQVSILNGIVMGGGAG-VSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRAC 178 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~-Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA~~~ 178 (375)
..|.|+.|-|.|.||+.. +++.+|+++|.++|.+++ ..+-+....+.+-+. -..-+|+.+.+.
T Consensus 194 ~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~-------aGP~vi~~~~~~~~~---------e~~~~Ae~~~~~ 257 (285)
T 2f9i_B 194 GLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGF-------AGRRVIEQTINEKLP---------DDFQTAEFLLEH 257 (285)
T ss_dssp TCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEES-------SCHHHHHHHHTSCCC---------TTTTBHHHHHHT
T ss_pred CCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEE-------cCHHHHHHHhcccch---------HhHhhHHHHHhc
Confidence 899999999999999865 488999999998887664 211122222221111 111246777789
Q ss_pred CccceecCCccHH
Q 017189 179 GLATHFVPSSRLA 191 (375)
Q Consensus 179 GLv~~vv~~~~l~ 191 (375)
|+||.|++++++.
T Consensus 258 G~iD~Iv~~~e~r 270 (285)
T 2f9i_B 258 GQLDKVVHRNDMR 270 (285)
T ss_dssp TCCSEECCGGGHH
T ss_pred CCccEEeChHHHH
Confidence 9999999987653
|
| >3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00057 Score=69.03 Aligned_cols=133 Identities=16% Similarity=0.140 Sum_probs=90.0
Q ss_pred EEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC--C
Q 017189 23 TLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY--T 100 (375)
Q Consensus 23 tlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~--~ 100 (375)
..|-.-+.-++.....+.+.++++.+.+. .+-+|.|.-+|++. +.+ +...+..+.+++.++..+ .
T Consensus 103 a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dSgGaR-----mqE-------g~~~l~~~~~i~~~~~~~s~~ 169 (530)
T 3iav_A 103 SQDFTVFGGALGEVYGQKIVKVMDFALKT-GCPVVGINDSGGAR-----IQE-------GVASLGAYGEIFRRNTHASGV 169 (530)
T ss_dssp EECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCSBC-----GGG-------THHHHHHHHHHHHHHHHTTTT
T ss_pred EECCCcceEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCcc-----hhh-------hhhhHHHHHHHHHHHHHHcCC
Confidence 33333466789999999999999998876 46677777654433 322 111111222233333222 3
Q ss_pred CcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH----
Q 017189 101 KPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM---- 175 (375)
Q Consensus 101 kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA---- 175 (375)
.|+|++|.|+|.|||......||++|++++ +.+++. |+..-. ..||+.+++++.
T Consensus 170 iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~-~~~ge~v~~e~LGGa~ 228 (530)
T 3iav_A 170 IPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIK-TVTGEDVGFEELGGAR 228 (530)
T ss_dssp SCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHH-HHHCCCCCHHHHHBHH
T ss_pred CCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHH-HHhCCcCChhhcchHH
Confidence 899999999999999988889999999886 877652 222111 257888888775
Q ss_pred ---HHcCccceecCCcc
Q 017189 176 ---RACGLATHFVPSSR 189 (375)
Q Consensus 176 ---~~~GLv~~vv~~~~ 189 (375)
...|++|.++++++
T Consensus 229 ~h~~~sGv~d~va~de~ 245 (530)
T 3iav_A 229 THNSTSGVAHHMAGDEK 245 (530)
T ss_dssp HHHHTSCCCSEEESSHH
T ss_pred HHHhccCceeEEecChH
Confidence 57999999998853
|
| >3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0013 Score=66.26 Aligned_cols=134 Identities=13% Similarity=0.097 Sum_probs=89.4
Q ss_pred EEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHH--hC
Q 017189 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMA--TY 99 (375)
Q Consensus 22 itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~--~~ 99 (375)
+..+..-+.-++.....+.+.++++.+.+. .+-+|.|.-+|++. +.+-. ..+..+-+.+.++. .-
T Consensus 110 ~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSGGAR-----mqeg~-------~sl~~~~~i~~~~~~~s~ 176 (531)
T 3n6r_B 110 FSQDFTVLGGSVSETHSKKICKIMDMAMQN-GAPVIGINDSGGAR-----IQEGV-------DSLAGYGEVFQRNIMASG 176 (531)
T ss_dssp EEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCCBC-----GGGTH-------HHHHHHHHHHHHHHHTTT
T ss_pred EEECCCcccccccHHHHHHHHHHHHHHHHc-CCCEEEEeCCCccc-----cCccc-------chhhhHHHHHHHHHHHhC
Confidence 334444456789999999999999988875 45677776544333 33210 00111112222222 23
Q ss_pred CCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH---
Q 017189 100 TKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM--- 175 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA--- 175 (375)
..|+|++|.|+|.|||......||++|+.++ +.+++ -|+..-+ ..||+.+++++.
T Consensus 177 ~iP~Isvv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~--------------------aGP~vI~-~~~ge~v~~E~LGGa 235 (531)
T 3n6r_B 177 VVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMFV--------------------TGPDVVK-TVTNEQVSAEELGGA 235 (531)
T ss_dssp TSCEEEEECSCCBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHH-HHHCCCCCHHHHHBH
T ss_pred CCCEEEEEeCCcchHHHHHhhhCCEEEEecCCceEee--------------------cCHHHHH-HHhCCccChhhcchH
Confidence 4899999999999999887777999999985 66443 1222111 258899999998
Q ss_pred ----HHcCccceecCCcc
Q 017189 176 ----RACGLATHFVPSSR 189 (375)
Q Consensus 176 ----~~~GLv~~vv~~~~ 189 (375)
...|++|.++++++
T Consensus 236 ~~h~~~sG~~d~v~~~e~ 253 (531)
T 3n6r_B 236 TTHTRKSSVADAAFENDV 253 (531)
T ss_dssp HHHHHTTSCCSEEESSHH
T ss_pred HHHhhccCcceEEeCCHH
Confidence 78999999998854
|
| >1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0021 Score=64.95 Aligned_cols=137 Identities=13% Similarity=0.169 Sum_probs=88.7
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
..+..+-.=..-++.....+.+.++++.+.+. .+-+|.|..+| |+.+.+-.... ..+.+.+..+. .+ .-
T Consensus 98 ~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~SG-----GARmqeg~~sl---~~~~~i~~~~~-~~-s~ 166 (523)
T 1on3_A 98 HAASQDFTVMGGSAGETQSTKVVETMEQALLT-GTPFLFFYDSG-----GARIQEGIDSL---SGYGKMFFANV-KL-SG 166 (523)
T ss_dssp EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEEC-----SBCGGGTHHHH---HHHHHHHHHHH-HH-TT
T ss_pred EEEEEcCCccCCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----CCChhhHHHHH---HHHHHHHHHHH-Hh-cC
Confidence 33334443466789999999999999988875 46677777643 44443311100 11111122221 22 33
Q ss_pred CCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHH-----H
Q 017189 100 TKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGA-----E 174 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~-----e 174 (375)
..|.|+++.|+|.||+......||++||.+++.+++. |+..-+ ..+|+.++.+ +
T Consensus 167 ~iP~Isvv~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~-~~~ge~~~~e~lggae 225 (523)
T 1on3_A 167 VVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIK-SVTGEDVTADELGGAE 225 (523)
T ss_dssp TSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHH-HHHCCCCCHHHHHSHH
T ss_pred CCCEEEEEcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHH-HHhCCcCChHhcccHH
Confidence 4999999999999999988899999999999887654 211111 1467777753 3
Q ss_pred HH--HcCccceecCCc
Q 017189 175 MR--ACGLATHFVPSS 188 (375)
Q Consensus 175 A~--~~GLv~~vv~~~ 188 (375)
.+ ..|++|.+++++
T Consensus 226 ~h~~~~G~vd~vv~d~ 241 (523)
T 1on3_A 226 AHMAISGNIHFVAEDD 241 (523)
T ss_dssp HHHHTTCCCSEEESSH
T ss_pred HHhhccCceEEEeCCH
Confidence 34 589999999964
|
| >2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0039 Score=63.29 Aligned_cols=132 Identities=13% Similarity=0.069 Sum_probs=87.1
Q ss_pred EEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh--CC
Q 017189 23 TLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT--YT 100 (375)
Q Consensus 23 tlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~--~~ 100 (375)
..+-.-..-++.....+.+.++++.+.+. .+-+|.|.-+| |+.+.+-.. . +..+.+++.++.. -.
T Consensus 114 a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dSG-----GARmqeg~~------s-l~~~~~i~~~~~~~s~~ 180 (548)
T 2bzr_A 114 SQDATVFGGSLGEVYGEKIVKVQELAIKT-GRPLIGINDGA-----GARIQEGVV------S-LGLYSRIFRNNILASGV 180 (548)
T ss_dssp EECTTSGGGCCCHHHHHHHHHHHHHHHHH-TCCEEEEECCC-----SCCGGGTTH------H-HHHHHHHHHHHHHTTTT
T ss_pred EEcCccccCCCChhHHHHHHHHHHHHHHc-CCCEEEEEcCC-----CCCchhHHH------H-HHHHHHHHHHHHHhcCC
Confidence 33333356789999999999999988875 46777777644 444432110 0 1122223333332 34
Q ss_pred CcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHH-----H
Q 017189 101 KPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGA-----E 174 (375)
Q Consensus 101 kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~-----e 174 (375)
.|.|++|.|+|.||+......||++||.++ +.+++. |+..-+ ..+|+.++.+ +
T Consensus 181 iP~Isvv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~-~~~ge~v~~e~lggae 239 (548)
T 2bzr_A 181 IPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIK-TVTGEEVTMEELGGAH 239 (548)
T ss_dssp SCEEEEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHH-HHHCCCCCHHHHHBHH
T ss_pred CcEEEEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHH-HHhCCcCChHhcccHH
Confidence 999999999999999887789999999997 876653 211111 1467777754 3
Q ss_pred HH--HcCccceecCCc
Q 017189 175 MR--ACGLATHFVPSS 188 (375)
Q Consensus 175 A~--~~GLv~~vv~~~ 188 (375)
.+ ..|++|.+++++
T Consensus 240 ~h~~~sG~~d~vv~d~ 255 (548)
T 2bzr_A 240 THMAKSGTAHYAASGE 255 (548)
T ss_dssp HHHHTSSCCSEEESSH
T ss_pred HHhhccCceeEEeCCH
Confidence 33 589999999864
|
| >3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0016 Score=65.92 Aligned_cols=142 Identities=18% Similarity=0.181 Sum_probs=92.9
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccc-cCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCA-GGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~a-G~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
..+..+..-+.-++.....+.+.++++.+.+. .+-+|.|.-+|+++.. +.+. +.... . +.........+..
T Consensus 124 ~V~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSgGARl~~q~~~--~~~~~----~-~~~i~~~~~~ls~ 195 (555)
T 3u9r_B 124 MIVGNDATVKGGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSGGANLPRQDEV--FPDRE----H-FGRIFFNQANMSA 195 (555)
T ss_dssp EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCCBCGGGGGGT--SSSTT----S-TTHHHHHHHHHHH
T ss_pred EEEEECCccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCCCccee--ecccc----c-HHHHHHHHHHHhc
Confidence 33334444456789999999999999998876 4567777665554431 1111 00000 0 1122222334566
Q ss_pred CCCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH--
Q 017189 99 YTKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM-- 175 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA-- 175 (375)
...|+|++|.|.|.|||......||++|+.++ +.+ |+ + |+..-+ ..||+.+++++.
T Consensus 196 ~giP~Isvv~G~~~GGga~~~a~~d~vim~e~~a~i-------~~----a---------GP~vik-~~~ge~~~~e~LGG 254 (555)
T 3u9r_B 196 RGIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATI-------FL----A---------GPPLVK-AATGEVVSAEELGG 254 (555)
T ss_dssp TTCCEEEEECSCCBGGGGHHHHTSSEEEEETTTCBC-------BS----S---------CHHHHH-HHHCCCCCHHHHHB
T ss_pred CCCCEEEEEecCCCccHHHHHHhCCceEEecCCceE-------EE----c---------cHHHHH-HHhcCccChhhccc
Confidence 78999999999999999999999999988764 543 33 1 211111 258899999988
Q ss_pred -----HHcCccceecCCccH
Q 017189 176 -----RACGLATHFVPSSRL 190 (375)
Q Consensus 176 -----~~~GLv~~vv~~~~l 190 (375)
...|++|.++++++.
T Consensus 255 a~~h~~~sGv~d~v~~de~~ 274 (555)
T 3u9r_B 255 ADVHCKVSGVADHYAEDDDH 274 (555)
T ss_dssp HHHHHHTTCSCSEEESSHHH
T ss_pred hhhhhhccCceeEEeCCHHH
Confidence 789999999987653
|
| >1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.005 Score=62.18 Aligned_cols=135 Identities=11% Similarity=0.120 Sum_probs=87.0
Q ss_pred EEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCC
Q 017189 22 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTK 101 (375)
Q Consensus 22 itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~k 101 (375)
+..+-.-..-++.....+.+.++++.+.+. .+-+|.|..+| |+.+.+-.... ..+.+.+..+. .+ .-..
T Consensus 96 ~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~SG-----GaRmqeg~~sl---~~~~~i~~~~~-~~-s~~i 164 (522)
T 1x0u_A 96 YAQDFTVLGGSLGETHANKIVRAYELALKV-GAPVVGINDSG-----GARIQEGALSL---EGYGAVFKMNV-MA-SGVI 164 (522)
T ss_dssp EEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCC-----SBCGGGTHHHH---HHHHHHHHHHH-HH-TTTS
T ss_pred EEecCceeCccccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----CCChhHHHHHH---HHHHHHHHHHH-Hh-CCCC
Confidence 333333356789999999999999988875 46778777644 44443211100 11111122221 22 3349
Q ss_pred cEEEEEccccchhhhhhhhcCCEEEEeCC-e-EEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHH-----H
Q 017189 102 PQVSILNGIVMGGGAGVSIHGRFRVATEN-S-VFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGA-----E 174 (375)
Q Consensus 102 PvIAavnG~a~GgG~~Lala~D~ria~~~-a-~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~-----e 174 (375)
|.|+++.|+|.||+......||++|+.++ + .+++. |+..-+ ..+|+.++.+ +
T Consensus 165 P~Isvv~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~a--------------------GP~vI~-~~~ge~~~~e~lggae 223 (522)
T 1x0u_A 165 PQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFVT--------------------GPEITK-VVLGEEVSFQDLGGAV 223 (522)
T ss_dssp CEEEEECSEEEGGGGHHHHHSSEEEEECSTTCEEESS--------------------CHHHHH-HTTCCCCCHHHHHBHH
T ss_pred cEEEEEcCCCchHHHHHHhcCCeEEEecCCccEEEec--------------------CHHHHH-HHhCCcCChhhcchHH
Confidence 99999999999999988889999999988 7 66541 211111 1467777753 3
Q ss_pred HH--HcCccceecCCc
Q 017189 175 MR--ACGLATHFVPSS 188 (375)
Q Consensus 175 A~--~~GLv~~vv~~~ 188 (375)
.+ ..|++|.+++++
T Consensus 224 ~~~~~~G~~d~vv~~~ 239 (522)
T 1x0u_A 224 VHATKSGVVHFMVDSE 239 (522)
T ss_dssp HHHHTTCCCSEEESCH
T ss_pred HHhhcCceeEEEeCCH
Confidence 33 589999999964
|
| >1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0066 Score=61.31 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=96.2
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCC
Q 017189 22 LTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYT 100 (375)
Q Consensus 22 itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 100 (375)
|.-|.+. ...+++.+....+.+.++.+.+. .+-+|.|.-.++ |..|.+-.. ........+++..+....
T Consensus 329 via~d~~~~gG~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~G-~~~G~~~E~--------~G~~~~~Ak~l~~~~~~~ 398 (522)
T 1x0u_A 329 IVANNPEEFGGSIDIDAADKAARFIRFCDAF-NIPLISLVDTPG-YVPGTDQEY--------KGIIRHGAKMLYAFAEAT 398 (522)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEECC-BCCSHHHHH--------TTHHHHHHHHHHHHHHCC
T ss_pred EEEECCCccCCCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCCC-CCCchHHHH--------HHHHHHHHHHHHHHHhCC
Confidence 3334443 33589999999999999988775 566777765443 333322111 122335556777888899
Q ss_pred CcEEEEEccccchhhhhhh----hcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc-hH-----H-HHHHh--hcC
Q 017189 101 KPQVSILNGIVMGGGAGVS----IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLP-GF-----F-GEYVG--LTG 167 (375)
Q Consensus 101 kPvIAavnG~a~GgG~~La----la~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~-g~-----~-a~~l~--ltG 167 (375)
.|.|+.|-|.|.|||.... +.+|+++|.+++.++ +..+-|+...+.+.. .. . ...+. +.-
T Consensus 399 vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~-------v~gpegaa~Il~r~~i~~~~d~~~~~~~l~~~y~~ 471 (522)
T 1x0u_A 399 VPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIA-------VTGPEGAVRILYRKEIQQASNPDDVLKQRIAEYRK 471 (522)
T ss_dssp SCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTSSSSSSSSSSSSSSHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 9999999999999976433 349999998887765 333333333333321 10 0 00010 001
Q ss_pred CccCHHHHHHcCccceecCCccHH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRLA 191 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l~ 191 (375)
..-++..+.+.|+||.|+++.++.
T Consensus 472 ~~~~~~~~~~~G~iD~II~p~~tR 495 (522)
T 1x0u_A 472 LFANPYWAAEKGLVDDVIEPKDTR 495 (522)
T ss_dssp HHSSSHHHHHTTSSSEECCGGGHH
T ss_pred hcCCHHHHHhcCCCcEeECHHHHH
Confidence 124667899999999999987763
|
| >1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.012 Score=59.48 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=85.8
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
..+..+..-+.-++.....+.+.++++.+.+. .+-+|.|.-+|+++..-.+. .+ ..+.+.+.... ....
T Consensus 101 ~v~a~D~t~~gGS~g~~~~~Ki~r~~e~A~~~-~lPvI~l~dSgGAR~qeg~~-~l-------~g~~~~~~~~~--~~s~ 169 (527)
T 1vrg_A 101 AVFSQDFTVMGGSLGEMHAKKIVKLLDLALKM-GIPVIGINDSGGARIQEGVD-AL-------AGYGEIFLRNT--LASG 169 (527)
T ss_dssp EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEECSBCGGGTHH-HH-------HHHHHHHHHHH--HHTT
T ss_pred EEEEEeccccCccccHHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCccchhH-HH-------HHHHHHHHHHH--HhCC
Confidence 33333433356789999999999999988875 45566666544444321111 01 11112222221 2245
Q ss_pred CCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHH-----
Q 017189 100 TKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGA----- 173 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~----- 173 (375)
..|+|+.|.|+|.|||......||++||.++ +.++ + .|+..... .+|+.++.+
T Consensus 170 ~iP~Isvv~Gp~~GG~a~s~al~D~vi~~~~~a~i~-------~-------------aGP~vi~~-~~ge~v~~e~lgga 228 (527)
T 1vrg_A 170 VVPQITVIAGPCAGGAVYSPALTDFIVMVDQTARMF-------I-------------TGPNVIKA-VTGEEISQEDLGGA 228 (527)
T ss_dssp TSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCBCB-------S-------------SCHHHHHH-HHCCCCCHHHHHBH
T ss_pred CCCEEEEEeCCCchHHHHHHHcCCeEEEecCceEEE-------e-------------cCHHHHHH-HhCCCCCccccccH
Confidence 6999999999999999887779999999987 6633 2 12221111 466776653
Q ss_pred HHH--HcCccceecCCc
Q 017189 174 EMR--ACGLATHFVPSS 188 (375)
Q Consensus 174 eA~--~~GLv~~vv~~~ 188 (375)
+.+ ..|++|.+++++
T Consensus 229 e~~~~~~G~vd~vv~d~ 245 (527)
T 1vrg_A 229 MVHNQKSGNAHFLADND 245 (527)
T ss_dssp HHHHHTSCCCSEEESSH
T ss_pred HHHhhcccceEEEecCH
Confidence 333 589999999964
|
| >1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.021 Score=57.72 Aligned_cols=152 Identities=11% Similarity=0.087 Sum_probs=95.0
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCC
Q 017189 22 LTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYT 100 (375)
Q Consensus 22 itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 100 (375)
|.=|.|. ...+++.+-.....+.++.+++. ++-+|.|.-.. .|..|.+-+. ....+...+++..+....
T Consensus 334 via~~~~~~~G~~~~~~~~Kaar~i~~a~~~-~~Plv~lvDtp-G~~~G~~~E~--------~g~~~~~A~~~~a~~~~~ 403 (527)
T 1vrg_A 334 IVANQPSVLAGVLDIDSSDKAARFIRFLDAF-NIPILTFVDTP-GYLPGVAQEH--------GGIIRHGAKLLYAYSEAT 403 (527)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH--------TTHHHHHHHHHHHHHHCC
T ss_pred EEEEcCcccCCCCCHHHHHHHHHHHHHHhhc-CCCeEEEecCC-CCcCchhhHH--------hHHHHHHHHHHHHHhcCC
Confidence 3344443 23479999999999999888764 45555554332 2444433221 122344456777888899
Q ss_pred CcEEEEEccccchhhhhhhh----cCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc-h----H-H-HHHHh--hcC
Q 017189 101 KPQVSILNGIVMGGGAGVSI----HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLP-G----F-F-GEYVG--LTG 167 (375)
Q Consensus 101 kPvIAavnG~a~GgG~~Lal----a~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~-g----~-~-a~~l~--ltG 167 (375)
.|+|+.|-|.|.|||+.-.. .+|+++|.+++.+ ++.++-|+...+.|.- . . . ...+. +.-
T Consensus 404 vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~-------~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~ 476 (527)
T 1vrg_A 404 VPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEI-------AVMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQ 476 (527)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeE-------EecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 99999999999988764332 3888877766665 4555555554554422 0 1 1 11111 111
Q ss_pred CccCHHHHHHcCccceecCCccH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
..-++..+.+.|+||.|+++.+.
T Consensus 477 ~~~~p~~~~~~g~iD~II~p~~t 499 (527)
T 1vrg_A 477 QFANPYIAASRGYVDMVIDPRET 499 (527)
T ss_dssp HTSSHHHHHHTTSSSEECCGGGH
T ss_pred hhCCHHHHHHcCCCCeeeCHHHH
Confidence 13567889999999999998765
|
| >3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.028 Score=57.36 Aligned_cols=156 Identities=13% Similarity=0.054 Sum_probs=91.6
Q ss_pred EcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcE
Q 017189 24 LNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQ 103 (375)
Q Consensus 24 lnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPv 103 (375)
.+..-+.-++.....+.+.++++.+.+. .+-+|.|.-+|+++.. +-.+.... . ..+. ........+.....|+
T Consensus 113 ~D~tv~gGS~g~~~~~Ki~Ra~e~A~~~-~lPvI~l~dSgGArl~--~qe~~~~~-l--~~~g-~if~~~~~ls~~~iP~ 185 (588)
T 3gf3_A 113 SDNKKMAGAWVPGQAENLIRCSDAAKMM-HLPLIYLLNCSGVEFP--NQDKVYPN-R--RGGG-TPFFRNSELNQLGIPV 185 (588)
T ss_dssp ECTTSGGGCBCTTHHHHHHHHHHHHHHH-TCCEEEEECCCCBCGG--GHHHHSSS-T--TSTT-HHHHHHHHHHHTTCCE
T ss_pred ECCcccCCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCcCcc--cccccccc-h--hhHH-HHHHHHHHHhcCCCCE
Confidence 3333356788899999999999988875 3667777765555442 00111000 0 0011 1222223455678999
Q ss_pred EEEEccccchhhhhhhhcCCEEEEeCCeEEecccccc--CCCCCccHHHHHhhcc---h-HHHHHHhhcCCccCHHHHH-
Q 017189 104 VSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETAL--GLFPDIGASYFLSRLP---G-FFGEYVGLTGARLDGAEMR- 176 (375)
Q Consensus 104 IAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~--G~~p~~g~~~~l~rl~---g-~~a~~l~ltG~~i~A~eA~- 176 (375)
|++|-|.|.|||...++++|++++.+++.+++.-..+ |+-|.+ . ..+.-+ . ....+-..+.+.+.+.+.+
T Consensus 186 Isvv~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g--~-~~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~ 262 (588)
T 3gf3_A 186 IVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKG--Y-IDDEAAEQIIAAQIENSKLKVPAPGSVPIHY 262 (588)
T ss_dssp EEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCTTBHHHHT
T ss_pred EEEEeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccc--c-ccccchhhhhhhhccccccChhhccchhhhc
Confidence 9999999999988668888999999999887744321 211111 0 011000 0 1111111466778888877
Q ss_pred -HcCccceecCCcc
Q 017189 177 -ACGLATHFVPSSR 189 (375)
Q Consensus 177 -~~GLv~~vv~~~~ 189 (375)
..|++|.++++++
T Consensus 263 ~~sGv~d~~a~de~ 276 (588)
T 3gf3_A 263 DETGFFREVYQNDL 276 (588)
T ss_dssp TTSCCSCEEESSHH
T ss_pred cccccceEEeCCHH
Confidence 4899999998854
|
| >2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.029 Score=56.88 Aligned_cols=159 Identities=16% Similarity=0.190 Sum_probs=98.1
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCC
Q 017189 22 LTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYT 100 (375)
Q Consensus 22 itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 100 (375)
|.=|+|. ..-+++.+-.....+.++.+++. ++-+|.|--.+ .|..|.+-+. ....+...+++..+....
T Consensus 351 vian~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt~-Gf~~G~~~E~--------~Gi~~~ga~~l~a~~~~~ 420 (548)
T 2bzr_A 351 IVANQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDVP-GFLPGTDQEY--------NGIIRRGAKLLYAYGEAT 420 (548)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH--------TTHHHHHHHHHHHHHHCC
T ss_pred EEEECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeecc-CCCCChHHHH--------hhHHHHHHHHHHHHhCCC
Confidence 3334443 23479999999999999998764 45555554332 2555544322 122344556777788899
Q ss_pred CcEEEEEccccchhhhhhh----hcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-H------H-H---HHHhh
Q 017189 101 KPQVSILNGIVMGGGAGVS----IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-F------F-G---EYVGL 165 (375)
Q Consensus 101 kPvIAavnG~a~GgG~~La----la~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~------~-a---~~l~l 165 (375)
.|+|+.|-|.|.|||..-. +.+|+++|.++++++ +..+-|+...+.+.-- . . + ..+.-
T Consensus 421 VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~-------Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~ 493 (548)
T 2bzr_A 421 VPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQ 493 (548)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTCCC----------CHHHHHHHHH
T ss_pred CCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEE-------ecCHHHHHHHHhhhHHhhhhcccccHHHHHHHHHH
Confidence 9999999999998876433 348998887777655 5444455545544311 0 0 0 11111
Q ss_pred --cCCccCHHHHHHcCccceecCCccHH-HHHHHH
Q 017189 166 --TGARLDGAEMRACGLATHFVPSSRLA-LLEEAL 197 (375)
Q Consensus 166 --tG~~i~A~eA~~~GLv~~vv~~~~l~-~~~~~l 197 (375)
.-..-++..+.+.|+||.|+++.+.. .+..+|
T Consensus 494 ~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L 528 (548)
T 2bzr_A 494 EYEDTLVNPYVAAERGYVGAVIPPSHTRGYIGTAL 528 (548)
T ss_dssp HHHHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHH
T ss_pred HHHHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHH
Confidence 01124557799999999999987753 233444
|
| >1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.031 Score=56.37 Aligned_cols=152 Identities=14% Similarity=0.077 Sum_probs=96.3
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCC
Q 017189 22 LTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYT 100 (375)
Q Consensus 22 itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 100 (375)
|.=|+|. ...+++++-.....+.++.+++. ++-+|.|.-.. .|..|.+-+. ....+...+++..+....
T Consensus 330 vian~~~~~~G~~~~~~a~Kaar~i~~~~~~-~iPlv~lvDtp-Gf~~G~~~E~--------~Gi~~~~A~~l~a~a~~~ 399 (523)
T 1on3_A 330 IVANQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDVP-GFLPGVQQEY--------GGIIRHGAKMLYAYSEAT 399 (523)
T ss_dssp EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH--------TTHHHHHHHHHHHHHHCC
T ss_pred EEEecCCccCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCC-CcCcchHHHH--------hhHHHHHHHHHHHHhcCC
Confidence 3444543 23479999999999999888764 45555554332 2555543221 123345566777888999
Q ss_pred CcEEEEEccccchhhhhhhhc----CCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc-h----HH-H-HHHh--hcC
Q 017189 101 KPQVSILNGIVMGGGAGVSIH----GRFRVATENSVFAMPETALGLFPDIGASYFLSRLP-G----FF-G-EYVG--LTG 167 (375)
Q Consensus 101 kPvIAavnG~a~GgG~~Lala----~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~-g----~~-a-~~l~--ltG 167 (375)
.|+|+.|-|.+.|||+.-... +|+++|.+++.+ ++.++-|+...+.|.- . .. . ..+. +.-
T Consensus 400 vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~-------~Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~ 472 (523)
T 1on3_A 400 VPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEI-------AVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQN 472 (523)
T ss_dssp SCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeE-------EecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 999999999999888744333 788777666654 5555555555554431 0 00 0 1111 011
Q ss_pred CccCHHHHHHcCccceecCCccH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
..-++..+.+.|+||.|+++.+.
T Consensus 473 ~~~~p~~~a~~g~iD~II~p~~t 495 (523)
T 1on3_A 473 AFNTPYVAAARGQVDDVIDPADT 495 (523)
T ss_dssp HHSSHHHHHHTTSSSEECCGGGH
T ss_pred hhCCHHHHHhcCCCCEeeCHHHH
Confidence 12566889999999999998765
|
| >3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.038 Score=55.73 Aligned_cols=156 Identities=17% Similarity=0.153 Sum_probs=99.9
Q ss_pred CCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHH
Q 017189 17 SFVRILTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYL 95 (375)
Q Consensus 17 ~~v~~itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~ 95 (375)
|.-.-|.=|+|. ..-+++.+......+.++.+++. ++-+|.|.-..+ |..|.+-+. ....+...+++..
T Consensus 331 G~~Vgvian~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtpG-f~~G~~~E~--------~gi~~~~Ak~l~a 400 (530)
T 3iav_A 331 GRPVGIVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVPG-FLPGVDQEH--------DGIIRRGAKLIFA 400 (530)
T ss_dssp TEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEECC-BCCCHHHHH--------TTHHHHHHHHHHH
T ss_pred CEEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCCC-CCccHHHHH--------hhHHHHHHHHHHH
Confidence 333334445554 23579999999999999988875 466666654332 666654221 2344566778888
Q ss_pred HHhCCCcEEEEEccccchhhhhhhhc-----CCEEEEeCCeEEeccccccCCCCCccHHHHHhhc-ch-------HHHHH
Q 017189 96 MATYTKPQVSILNGIVMGGGAGVSIH-----GRFRVATENSVFAMPETALGLFPDIGASYFLSRL-PG-------FFGEY 162 (375)
Q Consensus 96 i~~~~kPvIAavnG~a~GgG~~Lala-----~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl-~g-------~~a~~ 162 (375)
+.....|+|+.|-|.+.|||. ++++ +|+++|.+++.++ +.++-|+...+.|- +. ..-..
T Consensus 401 ~a~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~-------Vm~~egaa~il~r~~~~~~~~d~~~~~~~ 472 (530)
T 3iav_A 401 YAEATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIA-------VMGAQGAVNILHRRTIADAGDDAEATRAR 472 (530)
T ss_dssp HHHCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTSTTTSTTCTTCHHHHHH
T ss_pred HHhCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEe-------cCCHHHHHHHHhhhhhhhcccCHHHHHHH
Confidence 999999999999999998776 3333 7988887777655 44444444444332 10 00011
Q ss_pred Hh--hcCCccCHHHHHHcCccceecCCccH
Q 017189 163 VG--LTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 163 l~--ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
+. +.-+..++..|.+.|+||.|+++.+.
T Consensus 473 ~~~~y~~~~~~p~~aa~~~~vD~VIdP~~T 502 (530)
T 3iav_A 473 LIQEYEDALLNPYTAAERGYVDAVIMPSDT 502 (530)
T ss_dssp HHHHHHHHHSSSHHHHHTTSSSEECCGGGH
T ss_pred HHHHHHHhcCCHHHHHhcCCCCcccCHHHH
Confidence 11 11112477888899999999999876
|
| >3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.051 Score=54.77 Aligned_cols=151 Identities=17% Similarity=0.167 Sum_probs=97.3
Q ss_pred EEEEEcCCCC-CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 20 RILTLNRPRQ-LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 20 ~~itlnrp~~-~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
.-|.=|+|.. ...++.+-.....+.++.+++. ++-+|.|.-.. .|..|.+-+. ....+...+++..+..
T Consensus 340 Vgvian~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDtp-Gf~~G~~~E~--------~Gi~~~gAk~l~a~a~ 409 (531)
T 3n6r_B 340 VGVVANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDVP-GFLPGTSQEY--------GGVIKHGAKLLYAYGE 409 (531)
T ss_dssp EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-SBCCSHHHHH--------TTHHHHHHHHHHHHHH
T ss_pred EEEEEecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCCC-CCCCCHHHHH--------hhHHHHHHHHHHHHHh
Confidence 3344455542 2479999999999999888764 45666655432 2555543221 2234566778888999
Q ss_pred CCCcEEEEEccccchhhhhhhh----cCCEEEEeCCeEEeccccccCCCCCccHHHHHhhc-ch------HH-HHHHhhc
Q 017189 99 YTKPQVSILNGIVMGGGAGVSI----HGRFRVATENSVFAMPETALGLFPDIGASYFLSRL-PG------FF-GEYVGLT 166 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lal----a~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl-~g------~~-a~~l~lt 166 (375)
...|+|+.|-|.+.|||..-.. .+|+++|.+++.++ +.++-|+...+.|- +. .. ..|-
T Consensus 410 a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~-------Vm~pegaa~Il~r~~~~~~~~~~~~~~~y~--- 479 (531)
T 3n6r_B 410 ATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVA-------VMGAKGATEIIHRGDLGDPEKIAQHTADYE--- 479 (531)
T ss_dssp CCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHCCTTTTSTTHHHHHHHHHH---
T ss_pred CCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEe-------cCCHHHHHHHHhcccccchhHHHHHHHHHH---
Confidence 9999999999999988864333 38998877776654 54444444444332 11 11 1221
Q ss_pred CCccCHHHHHHcCccceecCCccH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
-+.-++..|.+.|+||.|+++.+.
T Consensus 480 ~~~~~p~~aa~~~~vD~vIdP~~T 503 (531)
T 3n6r_B 480 ERFANPFVASERGFVDEVIQPRST 503 (531)
T ss_dssp HHHSSSHHHHHHTSSSEECCGGGH
T ss_pred HHhcCHHHHHhcCccCcccCHHHH
Confidence 122466678899999999999775
|
| >1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 | Back alignment and structure |
|---|
Probab=95.90 E-value=0.11 Score=53.20 Aligned_cols=143 Identities=13% Similarity=0.078 Sum_probs=94.8
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 30 LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 30 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
...++++-.....+.++.+++ .++-+|.|.-.. .|..|.+-+. ....+...+++..+..+..|+|+.|-|
T Consensus 384 ~G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDtp-Gf~~G~~~E~--------~Gi~~~gA~~~~a~a~a~vP~itvI~g 453 (587)
T 1pix_A 384 GGKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDTT-GIDVGNDAEK--------AELLGLGQSLIYSIQTSHIPQFEITLR 453 (587)
T ss_dssp TTEECHHHHHHHHHHHHHHHH-TTCCEEEEECCC-EECCSHHHHH--------TTHHHHHHHHHHHHHTCCCCEEEEECS
T ss_pred CCCcCHHHHHHHHHHHHHhhc-CCCCeEEEecCC-CCCCcHHHHH--------HHHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 357999999999999988776 456666665442 3555543221 233456677888999999999999999
Q ss_pred ccchhhhhhhhc-----C--CEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHH-----------H---HHHh-hcC
Q 017189 110 IVMGGGAGVSIH-----G--RFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFF-----------G---EYVG-LTG 167 (375)
Q Consensus 110 ~a~GgG~~Lala-----~--D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~-----------a---~~l~-ltG 167 (375)
.+.|||. ++++ + |+++|.+++.++ +.++-|+...+.+.--.. + ..+. -.-
T Consensus 454 ~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~~~~y~ 525 (587)
T 1pix_A 454 KGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFY 525 (587)
T ss_dssp EEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred CCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHHHH
Confidence 9998874 3443 4 888777776655 554455554444322100 0 0000 001
Q ss_pred CccCHHHHHHcCccceecCCccH
Q 017189 168 ARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
+..++..|.+.|+||.|+++.+.
T Consensus 526 ~~~~p~~aa~~g~iD~VI~p~~t 548 (587)
T 1pix_A 526 TKSRPKVCAELGLVDEIVDMNKI 548 (587)
T ss_dssp HTTSHHHHHHHTSSSEECCTTTH
T ss_pred HhCCHHHHHhcCCCccccCHHHH
Confidence 24788999999999999998775
|
| >3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B | Back alignment and structure |
|---|
Probab=95.04 E-value=0.32 Score=49.23 Aligned_cols=143 Identities=15% Similarity=0.058 Sum_probs=91.8
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
-+++.+......+.++.+++- ++-+|.|.-.++ |..|.+-.+ ....+...+++.++.....|+|+.|-|.
T Consensus 366 G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtpG-f~~G~~~E~--------~Gi~~~gAk~~~a~~~a~vP~itvi~g~ 435 (555)
T 3u9r_B 366 GILFAEAAQKGAHFIELACQR-GIPLLFLQNITG-FMVGQKYEA--------GGIAKHGAKLVTAVACARVPKFTVLIGG 435 (555)
T ss_dssp SSBCHHHHHHHHHHHHHHHHH-TCCEEEEEEECC-BCCSHHHHH--------TTHHHHHHHHHHHHHHCCSCEEEEEEEE
T ss_pred CccCHHHHHHHHHHHHHHhcC-CCCEEEEecCcC-CCCCHHHHH--------HHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 579999999999999988764 466777765433 555543221 2234556678888999999999999999
Q ss_pred cchhhhh-hh---hcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhc------------chH-H-H--HHH-hhcCCc
Q 017189 111 VMGGGAG-VS---IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRL------------PGF-F-G--EYV-GLTGAR 169 (375)
Q Consensus 111 a~GgG~~-La---la~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl------------~g~-~-a--~~l-~ltG~~ 169 (375)
+.|||.- ++ +.+|+++|.+++.++ +..+-|+...|... ... . + ..+ -..-+.
T Consensus 436 ~~Ggg~~am~~~~~~~d~~~a~p~A~i~-------Vmgpegaa~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~ 508 (555)
T 3u9r_B 436 SFGAGNYGMCGRAYDPRFLWMWPNARIG-------VMGGEQAAGVLAQVKREQAERAGQQLGVEEEAKIKAPILEQYEHQ 508 (555)
T ss_dssp EETTHHHHTTCGGGCCSEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhHhhcCccCCCCeEEEcCCcEEE-------cCCHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHHHHh
Confidence 9887643 22 347999887777665 44444444443311 000 0 0 000 001112
Q ss_pred cCHHHHHHcCccceecCCccH
Q 017189 170 LDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 170 i~A~eA~~~GLv~~vv~~~~l 190 (375)
.++..|...|++|.|+++.+.
T Consensus 509 ~~p~~aa~r~~vD~vIdP~~T 529 (555)
T 3u9r_B 509 GHPYYSSARLWDDGVIDPAQT 529 (555)
T ss_dssp HSHHHHHHTTSSSCBCCGGGH
T ss_pred CCHHHHhhccccCcccChHHH
Confidence 477778889999999999775
|
| >3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* | Back alignment and structure |
|---|
Probab=93.19 E-value=1.1 Score=45.62 Aligned_cols=140 Identities=14% Similarity=0.130 Sum_probs=92.3
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
..++++-.....+.++.+++- ++-+|.|.-. ..|..|.+-++ ....+...+++.++..+.+|+|+.|-|.
T Consensus 387 G~l~~~~a~Kaarfi~lcd~f-~iPlv~lvDt-pGf~~G~~aE~--------~Gi~~~gAk~l~a~a~a~VP~itvI~g~ 456 (588)
T 3gf3_A 387 GKLYRQGLIKMNEFVTLCARD-RIPLIWLQDT-TGIDVGDEAEK--------AELLGLGQSLIYSIENSKLPSLEITIRK 456 (588)
T ss_dssp TEECHHHHHHHHHHHHHHHHT-TCCEEEEECC-CEECCSHHHHH--------TTHHHHHHHHHHHHHHHCSCEEEEESSE
T ss_pred CCcCHHHHHHHHHHHHHhhhc-CCCeEEEecC-CCCCCCHHHHH--------HHHHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 468999999999999988874 5666666543 33666644221 2344566778889999999999999999
Q ss_pred cchhhhhhhhcC-------CEEEEeCCeEEeccccccCCCCCccHHHHHhhc-ch-----------------HHHHHHhh
Q 017189 111 VMGGGAGVSIHG-------RFRVATENSVFAMPETALGLFPDIGASYFLSRL-PG-----------------FFGEYVGL 165 (375)
Q Consensus 111 a~GgG~~Lala~-------D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl-~g-----------------~~a~~l~l 165 (375)
+.|||. +++++ |+++|.+++. +++.++-|+...+.+. +. ....++
T Consensus 457 ~~Ggg~-~am~~~~~~~~~~~~~awp~A~-------~sVm~pEgaa~Il~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-- 526 (588)
T 3gf3_A 457 ASAAAH-YVLGGPQGNNTNVFSIGTGACE-------YYVMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMIQMY-- 526 (588)
T ss_dssp EETTHH-HHTTCTTCTTTEEEEEECTTCE-------EESSCHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHH--
T ss_pred ccHHHH-HHhcccccCCccceEEECCCce-------EEeCCHHHHHHHHhhhHHhhhhccccccchHHHHHHHHHHHH--
Confidence 988775 34433 2666666655 4555544444444321 11 011111
Q ss_pred cCCccCHHHHHHcCccceecCCccHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLA 191 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~ 191 (375)
-+..++.-|.+.|+||.|+++.+..
T Consensus 527 -~~~~~p~~aA~r~~vD~VIdP~~TR 551 (588)
T 3gf3_A 527 -TDKSRPKYCTEKGMVDEIVDMTEVR 551 (588)
T ss_dssp -HHTTSHHHHHHTTSSSEECCGGGHH
T ss_pred -HHhCCHHHHHhcCCCCeeeCHHHHH
Confidence 1135788899999999999998763
|
| >2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A* | Back alignment and structure |
|---|
Probab=92.40 E-value=0.65 Score=48.81 Aligned_cols=37 Identities=22% Similarity=0.202 Sum_probs=33.3
Q ss_pred CCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEec
Q 017189 99 YTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAM 135 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~ 135 (375)
...|+|+.|.|.|.|||..++..||++|+.+++.+.+
T Consensus 258 ~~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~l 294 (793)
T 2x24_A 258 DEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIIL 294 (793)
T ss_dssp HHSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEES
T ss_pred CCCCEEEEEecCCchHHHHHHhhCCeEEEeccccEEe
Confidence 3599999999999999999999999999999876543
|
| >3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A | Back alignment and structure |
|---|
Probab=91.83 E-value=0.11 Score=54.20 Aligned_cols=34 Identities=15% Similarity=0.110 Sum_probs=31.4
Q ss_pred CCCcEEEEEccccchhhhhhhhcCCEEEEeCCeE
Q 017189 99 YTKPQVSILNGIVMGGGAGVSIHGRFRVATENSV 132 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~ 132 (375)
...|+|+.|.|+|.|||..+...||++|+.+++.
T Consensus 245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~ 278 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQP 278 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCC
T ss_pred cCCCEEEEEccCCchHHHHHHhhCCEEEEECCce
Confidence 4579999999999999999999999999999864
|
| >3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A | Back alignment and structure |
|---|
Probab=85.66 E-value=1.8 Score=45.10 Aligned_cols=109 Identities=14% Similarity=0.225 Sum_probs=73.4
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEc--
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILN-- 108 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavn-- 108 (375)
..++++-.....+.++.+++..++-+|.|.-. ..|..|.+-.. ....+...+++.++..+..|+|+.|-
T Consensus 447 G~l~pe~a~KaArfI~lcd~~f~iPLv~LvDt-pGf~~G~~aE~--------~Gi~k~gAkll~A~a~a~VP~itVI~Rk 517 (758)
T 3k8x_A 447 QVWHPNSAFKTAQAINDFNNGEQLPMMILANW-RGFSGGQRDMF--------NEVLKYGSFIVDALVDYKQPIIIYIPPT 517 (758)
T ss_dssp TEECHHHHHHHHHHHHHHHHTSCCCEEECCCC-CEECCSHHHHH--------TTHHHHHHHHHHHHHTCCSCEEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHhhhccCCCEEEEecC-CCCCCCHHHHH--------ccHHHHHHHHHHHHHhCCCCEEEEEecC
Confidence 47899999999999999887445666666533 34666654221 23345667788899999999999998
Q ss_pred cccchhhhhhhhc----CCEEEEeCCeEEeccccccCCCCCccHHHHHhh
Q 017189 109 GIVMGGGAGVSIH----GRFRVATENSVFAMPETALGLFPDIGASYFLSR 154 (375)
Q Consensus 109 G~a~GgG~~Lala----~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r 154 (375)
|.+.||++ +++. +|+ .-.|+.|...+|+.++-|+...+-|
T Consensus 518 Ge~~GGA~-~am~~~~~ad~-----~~v~Awp~A~isVM~pEgaa~Il~r 561 (758)
T 3k8x_A 518 GELRGGSW-VVVDPTINADQ-----MEMYADVNARAGVLEPQGMVGIKFR 561 (758)
T ss_dssp CEEETHHH-HTTCGGGSTTT-----EEEEEETTCEEESSCHHHHHHHHSC
T ss_pred CccchHHH-HHhCcccCCCH-----HHHhcCCCCEEEccCHHHHHHHHhc
Confidence 99988776 5554 444 0134455555666665665555543
|
| >2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A* | Back alignment and structure |
|---|
Probab=84.39 E-value=5.4 Score=41.94 Aligned_cols=102 Identities=15% Similarity=0.172 Sum_probs=68.5
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEE--c
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSIL--N 108 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAav--n 108 (375)
..++++-.....+.++.++. .++-+|.|.-. ..|..|.+-.. ....+...+++.++..+..|+|+.| .
T Consensus 462 G~l~~~~a~KaarfI~~cd~-f~iPlv~LvDt-pGf~~G~~aE~--------~Gi~~~gAkll~A~a~a~VP~itvI~r~ 531 (793)
T 2x24_A 462 QVWFPDSAYKTAQAIKDFNR-EKLPLMIFANW-RGFSGGMKDMY--------DQVLKFGAYIVDGLRKYRQPVLIYIPPY 531 (793)
T ss_dssp TEECHHHHHHHHHHHHHHHT-TTCCEEEECCB-CEECCSHHHHH--------TTHHHHHHHHHHHHHTCCSCEEEEECTT
T ss_pred CcccHHHHHHHHHHHHHhcc-CCCCEEEEecC-CCCCCCHHHHH--------hhHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 47999999999999999975 45666666543 33666643221 2344566778889999999999999 8
Q ss_pred cccchhhhhhh---hcCCE--EEEeCCeEEeccccccCCCCCccHH
Q 017189 109 GIVMGGGAGVS---IHGRF--RVATENSVFAMPETALGLFPDIGAS 149 (375)
Q Consensus 109 G~a~GgG~~La---la~D~--ria~~~a~f~~pe~~~G~~p~~g~~ 149 (375)
|.+.||++.++ +..|+ ++|.++|+ +|+.++-|+.
T Consensus 532 Ge~~GGa~~~~~~~~~~d~~ev~Awp~A~-------~~VM~pEgaa 570 (793)
T 2x24_A 532 AEVRGGSWAVMDTSINPLCIEMYADRESR-------ASVLEPEGTV 570 (793)
T ss_dssp CEEEHHHHHTTCGGGSTTTEEEEEETTCE-------EESSCHHHHH
T ss_pred CcccchhHHhhhcccCccHHHHhhhccCE-------EEecCHHHHH
Confidence 98877655332 34565 55555555 4555444443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 375 | ||||
| d1mj3a_ | 260 | c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat | 3e-30 | |
| d1uiya_ | 253 | c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {The | 1e-20 | |
| d1hzda_ | 266 | c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [T | 4e-16 | |
| d1dcia_ | 275 | c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2 | 5e-16 | |
| d1pjha_ | 266 | c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2 | 3e-13 | |
| d2f6qa1 | 245 | c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-C | 7e-13 | |
| d1wdka4 | 310 | c.14.1.3 (A:1-310) Fatty oxidation complex alpha s | 9e-13 | |
| d1q52a_ | 297 | c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacter | 3e-11 | |
| d1nzya_ | 269 | c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Ps | 6e-10 | |
| d2a7ka1 | 230 | c.14.1.3 (A:1-230) Carbapenem biosynthes protein C | 8e-09 | |
| d2fw2a1 | 258 | c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Hum | 1e-08 | |
| d1szoa_ | 249 | c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus | 1e-07 | |
| d1wz8a1 | 263 | c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TT | 3e-07 | |
| d1sg4a1 | 249 | c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-d | 1e-06 | |
| d1ef8a_ | 261 | c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Esc | 3e-06 |
| >d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Enoyl-CoA hydratase (crotonase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 114 bits (287), Expect = 3e-30
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V ++ LNRP+ LNAL +I L + + +E D V ++L G +AF AG D+ ++
Sbjct: 17 VGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIK-EMQN 75
Query: 79 INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPET 138
+ K + KP ++ +NG +GGG +++ A E + F PE
Sbjct: 76 RTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEI 135
Query: 139 ALGLFPDIGASYFLSRLPGF-FGEYVGLTGARLDGAEMRACG 179
LG P G + L+R G + LTG R+ + + G
Sbjct: 136 LLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAG 177
|
| >d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Enoyl-CoA hydratase (crotonase) species: Thermus thermophilus [TaxId: 274]
Score = 87.8 bits (216), Expect = 1e-20
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+++ E V ++ LN P + N LS +M LL+ E D V+ ++L G+G+AF AG
Sbjct: 1 MVQVEKGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGA 60
Query: 71 DVAAVVRGINEGAKFFSKEFILNY----LMATYTKPQVSILNGIVMGGGAGVSIHGRFRV 126
D+A + R GA+ + + + TY KP V+ +NG + GGAG+++ V
Sbjct: 61 DLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVV 120
Query: 127 ATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHF 184
E + E +G + + + + + + LTG ++ E +A GL
Sbjct: 121 MDEEARLGYTEVKIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRI 178
|
| >d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: AUH protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.2 bits (183), Expect = 4e-16
Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 3/181 (1%)
Query: 10 QVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAG 69
+ LEEE + +L +NR N+LS +I L + ++D V+ +I++ +
Sbjct: 7 RHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCA 66
Query: 70 GDVAAVVRGIN--EGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVA 127
G ++ E F SK + +A P ++ ++G+ +GGG +++ RVA
Sbjct: 67 GADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVA 126
Query: 128 TENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGL-TGARLDGAEMRACGLATHFVP 186
++ + ET L + P G + L R G + + LDG E +A GL +H +
Sbjct: 127 ASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLE 186
Query: 187 S 187
Sbjct: 187 Q 187
|
| >d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 75.2 bits (183), Expect = 5e-16
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
+ E + V + LNRP + NA++ L+E FQ+ DS+ + +++ G G+
Sbjct: 1 AYESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKM 60
Query: 66 FCAGGDVAAVVRGINEGAKFFSKEFILNY------------LMATYTKPQVSILNGIVMG 113
F +G D+ + I + ++ KP ++ ++G +G
Sbjct: 61 FTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIG 120
Query: 114 GGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFF 159
GG + R T+++ F + E +GL D+G L ++ G
Sbjct: 121 GGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNR 166
|
| >d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 67.0 bits (162), Expect = 3e-13
Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 16/206 (7%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
Q +++ I+ L P LNAL + L EL + + + +V I++ GR
Sbjct: 2 RQNEKISYRIEGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRF 61
Query: 66 FCAGGDVAAVVRGINEGAK------------FFSKEFILNYLMATYTKPQVSILNGIVMG 113
F +G D + + + F ++ + ++K + LNG +G
Sbjct: 62 FSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIG 121
Query: 114 GGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGL--TGARLD 171
A + + + V+ + A G + L
Sbjct: 122 LSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFK 181
Query: 172 GAEMRACGLATHFVPSSRLALLEEAL 197
M G + + EA
Sbjct: 182 YDIMCENGFISKNFNMP--SSNAEAF 205
|
| >d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.5 bits (158), Expect = 7e-13
Identities = 26/139 (18%), Positives = 58/139 (41%), Gaps = 6/139 (4%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
+ + NRP++ NA++ +M ++ + D ++ ++ G G + +G D+
Sbjct: 13 ITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSIITVL-TGNGDYYSSGNDLTNFTDI 71
Query: 79 INEGAKFFSK-----EFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVF 133
G + +K + KP ++++NG +G + A++ + F
Sbjct: 72 PPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATF 131
Query: 134 AMPETALGLFPDIGASYFL 152
P + LG P+ +SY
Sbjct: 132 HTPFSHLGQSPEGCSSYTF 150
|
| >d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Fatty oxidation complex alpha subunit, N-terminal domain species: Pseudomonas fragi [TaxId: 296]
Score = 66.3 bits (160), Expect = 9e-13
Identities = 52/314 (16%), Positives = 100/314 (31%), Gaps = 36/314 (11%)
Query: 12 LEEETSFVRILTLN-RPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGG 70
+ S + L + + +N + ++ L + + D++VK +I+ F G
Sbjct: 10 VTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGA 69
Query: 71 DVAAVVRGINEGAKFFSKEFI----LNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRV 126
D+ V + + P V+ +NGI +GGG + + FRV
Sbjct: 70 DITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRV 129
Query: 127 ATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVP 186
+++ +PE LG++P G + L R + A ++
Sbjct: 130 MADSAKIGLPEVKLGIYPGFGGTVRLPR--------------------LIGVDNAVEWIA 169
Query: 187 SSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246
S + E+AL + AV+ L D +D R+ E L
Sbjct: 170 SGKENRAEDALKVSA------VDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKL 223
Query: 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVM 306
E + P ++ +++I++ G + L E +
Sbjct: 224 KLNAIEQMMAFETAKGFVAGQAGPNYPAPVEA-IKTIQKAANFGRDKALEVEAAGFAKLA 282
Query: 307 MGEVSKD----FFE 316
S F
Sbjct: 283 KTSASNCLIGLFLN 296
|
| >d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Naphthoate synthase MenB species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 61.3 bits (147), Expect = 3e-11
Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 19/126 (15%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
+ NRP NA + L + +V +++L G G + GG
Sbjct: 30 TVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGD 89
Query: 79 INEGA-------------------KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVS 119
+ L+ K + ++NG GGG +
Sbjct: 90 QRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLH 149
Query: 120 IHGRFR 125
+
Sbjct: 150 VVCDLT 155
|
| >d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: 4-Chlorobenzoyl-CoA dehalogenase species: Pseudomonas sp., strain CBS-3 [TaxId: 306]
Score = 57.1 bits (136), Expect = 6e-10
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDV------ 72
V +T+ PR NALS + + + + R E D +V +++ G AFCAG +
Sbjct: 13 VAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLD 72
Query: 73 AAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSV 132
V + + + + +P ++ +NG+ GGG G+S+ + +++
Sbjct: 73 KGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAK 132
Query: 133 FAMPETALGLFPDIGASYFLSRLPGFF 159
F +G+ D SY L+R+ G
Sbjct: 133 FVCAWHTIGIGNDTATSYSLARIVGMR 159
|
| >d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Carbapenem biosynthes protein CarB species: Pectobacterium carotovorum [TaxId: 554]
Score = 53.3 bits (126), Expect = 8e-09
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVK 55
V EE + VR++TL+ P + N S + + + + R D +V+
Sbjct: 2 VFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVR 46
|
| >d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Chromodomain protein CDY2A species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (126), Expect = 1e-08
Identities = 32/165 (19%), Positives = 54/165 (32%), Gaps = 4/165 (2%)
Query: 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
D V+++E F +I+ R + NAL+ ++I ++ D + +L C
Sbjct: 2 RDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCC 61
Query: 68 AGGD----VAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGR 123
+ + KP V +NG +G GA +
Sbjct: 62 GLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD 121
Query: 124 FRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGA 168
A E + F P T G PD +S ++ G L
Sbjct: 122 LVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANEMLIAG 166
|
| >d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: 6-oxo camphor hydrolase species: Rhodococcus erythropolis [TaxId: 1833]
Score = 49.7 bits (117), Expect = 1e-07
Identities = 32/181 (17%), Positives = 54/181 (29%), Gaps = 4/181 (2%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRG 78
V ++T++ + ++ L F D K++IL G G +FC D + G
Sbjct: 23 VLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLG 82
Query: 79 INEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFA--MP 136
E + V + + + +A E++ F
Sbjct: 83 TPHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGPVTNAPEIPVMSDIVLAAESATFQDGPH 142
Query: 137 ETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEA 196
+ + D + L G Y LTG LD G + LL A
Sbjct: 143 FPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNEVLSEQ--ELLPRA 200
Query: 197 L 197
Sbjct: 201 W 201
|
| >d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Probable enoyl-CoA hydratase TTHA0218 species: Thermus thermophilus [TaxId: 274]
Score = 48.7 bits (114), Expect = 3e-07
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 1 MASAQSQ-EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLIL 59
+AS +++ V +T R +LNA+ + L +++ E V+ ++L
Sbjct: 1 LASLEARYPGLAFAWPRPGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLL 59
Query: 60 KGKGRAFC 67
+G+G F
Sbjct: 60 RGEGGVFS 67
|
| >d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 47.1 bits (110), Expect = 1e-06
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRA 65
SQ V + + V ++ P +N+LS + ++ L+ ++ E D + + +IL
Sbjct: 1 SQRVLVEPDAGAGVAVMKFKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPG 59
Query: 66 FC 67
Sbjct: 60 VF 61
|
| >d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Methylmalonyl CoA decarboxylase species: Escherichia coli [TaxId: 562]
Score = 45.6 bits (106), Expect = 3e-06
Identities = 11/49 (22%), Positives = 19/49 (38%)
Query: 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFC 67
V ++ N R+LNALS I L++ +++ G
Sbjct: 14 VAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVF 62
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 375 | |||
| d1mj3a_ | 260 | Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve | 100.0 | |
| d2fw2a1 | 258 | Chromodomain protein CDY2A {Human (Homo sapiens) [ | 100.0 | |
| d1wz8a1 | 263 | Probable enoyl-CoA hydratase TTHA0218 {Thermus the | 100.0 | |
| d1nzya_ | 269 | 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., | 100.0 | |
| d1hzda_ | 266 | AUH protein {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ef8a_ | 261 | Methylmalonyl CoA decarboxylase {Escherichia coli | 100.0 | |
| d1dcia_ | 275 | Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso | 100.0 | |
| d1uiya_ | 253 | Enoyl-CoA hydratase (crotonase) {Thermus thermophi | 100.0 | |
| d1q52a_ | 297 | Naphthoate synthase MenB {Mycobacterium tuberculos | 100.0 | |
| d2f6qa1 | 245 | Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human ( | 100.0 | |
| d1wdka4 | 310 | Fatty oxidation complex alpha subunit, N-terminal | 100.0 | |
| d2a7ka1 | 230 | Carbapenem biosynthes protein CarB {Pectobacterium | 100.0 | |
| d1sg4a1 | 249 | Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso | 100.0 | |
| d1pjha_ | 266 | Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso | 100.0 | |
| d1szoa_ | 249 | 6-oxo camphor hydrolase {Rhodococcus erythropolis | 100.0 | |
| d2cbya1 | 179 | Clp protease, ClpP subunit {Mycobacterium tubercul | 98.18 | |
| d1yg6a1 | 183 | Clp protease, ClpP subunit {Escherichia coli [TaxI | 98.13 | |
| d2f6ia1 | 190 | Clp protease, ClpP subunit {Plasmodium falciparum | 97.93 | |
| d1y7oa1 | 192 | Clp protease, ClpP subunit {Streptococcus pneumoni | 97.93 | |
| d1tg6a1 | 193 | Clp protease, ClpP subunit {Human (Homo sapiens), | 97.79 | |
| d1on3a1 | 253 | Methylmalonyl-CoA carboxyltransferase (transcarbox | 97.6 | |
| d2f9ya1 | 316 | Acetyl-coenzyme A carboxylase carboxyl transferase | 97.55 | |
| d1xnya1 | 258 | Propionyl-CoA carboxylase complex B subunit, PccB | 97.38 | |
| d1vrga1 | 251 | Propionyl-CoA carboxylase complex B subunit, PccB | 97.37 | |
| d2f9yb1 | 263 | Acetyl-coenzyme A carboxylase carboxyl transferase | 97.27 | |
| d1pixa2 | 287 | Glutaconyl-CoA decarboxylase A subunit {Acidaminoc | 97.27 | |
| d2a7sa1 | 258 | Propionyl-CoA carboxylase complex B subunit, PccB | 97.14 | |
| d2a7sa2 | 271 | Propionyl-CoA carboxylase complex B subunit, PccB | 96.52 | |
| d1on3a2 | 264 | Methylmalonyl-CoA carboxyltransferase (transcarbox | 96.49 | |
| d1xnya2 | 263 | Propionyl-CoA carboxylase complex B subunit, PccB | 96.37 | |
| d1vrga2 | 264 | Propionyl-CoA carboxylase complex B subunit, PccB | 96.27 | |
| d1uyra2 | 404 | Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc | 94.53 | |
| d1pixa3 | 299 | Glutaconyl-CoA decarboxylase A subunit {Acidaminoc | 93.91 | |
| d1uyra1 | 333 | Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc | 93.87 |
| >d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Enoyl-CoA hydratase (crotonase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-57 Score=424.92 Aligned_cols=254 Identities=23% Similarity=0.372 Sum_probs=230.4
Q ss_pred CCCcEEEEEeC---CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhh
Q 017189 7 QEDQVLEEETS---FVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGA 83 (375)
Q Consensus 7 ~~~~v~~~~~~---~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 83 (375)
+|++|.++++| +|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||||.|+.||+|+|++++...... .
T Consensus 2 ~~~~i~~e~~g~~~~I~~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~-~ 80 (260)
T d1mj3a_ 2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQ-D 80 (260)
T ss_dssp CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHH-H
T ss_pred CCeEEEEEEEcCCCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCcceEEEecccccccccchhhhhhccchh-h
Confidence 58899999974 8999999999999999999999999999999999999999999999999999999998654322 3
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.+...+..++..+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++| ..+++
T Consensus 81 ~~~~~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~ig~~~a~~ 160 (260)
T d1mj3a_ 81 CYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAME 160 (260)
T ss_dssp HHHC--CCGGGGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHHHHH
T ss_pred hhHHHHHHHHHHhccCCCeEEEEEcCeEeHHHHHHHHHCCEEEEcCCCEEECchhccCcCCcccHHHHHHHHhCHHHHHH
Confidence 34445566778899999999999999999999999999999999999999999999999999999999999999 57999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
++++|++++|+||+++|||+++++++++.....
T Consensus 161 l~l~g~~~~a~eA~~~Glv~~v~~~~~~~~~a~----------------------------------------------- 193 (260)
T d1mj3a_ 161 MVLTGDRISAQDAKQAGLVSKIFPVETLVEEAI----------------------------------------------- 193 (260)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHH-----------------------------------------------
T ss_pred HHHcCcccCchhhccCCCceeeecccccccccc-----------------------------------------------
Confidence 999999999999999999999999988743222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAIL 322 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l 322 (375)
+.+++++..+|.+++.+|++++.....+++++++.|.+.+..++.++ |++||++||
T Consensus 194 --------------------~~a~~i~~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~~~~~~~s~---d~~egi~aF- 249 (260)
T d1mj3a_ 194 --------------------QCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYSTFATD---DRREGMSAF- 249 (260)
T ss_dssp --------------------HHHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSH---HHHHHHHHH-
T ss_pred --------------------cccccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHH-
Confidence 23789999999999999999999999999999999999999999765 999999999
Q ss_pred ccCCCCCCCCC
Q 017189 323 LDKDKNPKWKP 333 (375)
Q Consensus 323 ~ek~r~P~w~~ 333 (375)
+|| |+|+|+.
T Consensus 250 leK-R~P~f~~ 259 (260)
T d1mj3a_ 250 VEK-RKANFKD 259 (260)
T ss_dssp HTT-SCCCCCC
T ss_pred hCC-CCCCCCC
Confidence 599 8999985
|
| >d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Chromodomain protein CDY2A species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-56 Score=415.86 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=229.1
Q ss_pred CCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh----
Q 017189 8 EDQVLEEETSFVRILTLN-RPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---- 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itln-rp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---- 82 (375)
|++|.++++++|++|+|| ||+++|++|.+|+.+|.++++.++.| ++++|||||.|++||+|+|++++.......
T Consensus 1 y~~i~v~~~~gi~~i~l~~rp~~~Nals~~~~~el~~al~~~~~d-~~~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~ 79 (258)
T d2fw2a1 1 YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAAD-DSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTA 79 (258)
T ss_dssp CCSEEEEEETTEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHS-SCSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHH
T ss_pred CceEEEEEECCEEEEEECCCCcccCCCCHHHHHHHHHHHHHHHcC-CCEEEEEecCccccccccccchhhhcccccccch
Confidence 578999999999999997 79999999999999999999999987 569999999999999999999986543221
Q ss_pred -hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 83 -AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 83 -~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
..+...+.+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++|++| ..+
T Consensus 80 ~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ig~~~a 159 (258)
T d2fw2a1 80 SLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASA 159 (258)
T ss_dssp HHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHH
T ss_pred hhHHHHHHHHHHHhhhccceeeeeecccccccccccccccccccceecccceeeccccccccccccccccchhhcCcccc
Confidence 355667788999999999999999999999999999999999999999999999999999999999999999999 579
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcC
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRR 240 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~ 240 (375)
++|++||++++|++|+++||||+|||++++.+ ++.
T Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------- 194 (258)
T d2fw2a1 160 NEMLIAGRKLTAREACAKGLVSQVFLTGTFTQ--EVM------------------------------------------- 194 (258)
T ss_dssp HHHHTTCCEEEHHHHHHTTSCSEEECSTTHHH--HHH-------------------------------------------
T ss_pred chhhccCccccccccccccccccccccccccc--ccc-------------------------------------------
Confidence 99999999999999999999999999998743 222
Q ss_pred CHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 241 TVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 241 ~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+.+++|++.||.+++.+|++++.....+++++++.|.+.+..++.++ |++||++|
T Consensus 195 ----------------------~~a~~i~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~~s~---d~~Egi~a 249 (258)
T d2fw2a1 195 ----------------------IQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWSSA---QGIESMLK 249 (258)
T ss_dssp ----------------------HHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSH---HHHHHHHH
T ss_pred ----------------------hhhhhhhhhhHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCH---HHHHHHHH
Confidence 22689999999999999999999888899999999999999999754 99999999
Q ss_pred hhccCCCCCCC
Q 017189 321 ILLDKDKNPKW 331 (375)
Q Consensus 321 ~l~ek~r~P~w 331 (375)
| +|| |+|+|
T Consensus 250 f-~EK-R~p~f 258 (258)
T d2fw2a1 250 Y-VEN-KIDEF 258 (258)
T ss_dssp H-HHS-SCCCC
T ss_pred H-hCC-CCCCC
Confidence 9 599 89998
|
| >d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Probable enoyl-CoA hydratase TTHA0218 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.2e-56 Score=417.33 Aligned_cols=258 Identities=19% Similarity=0.256 Sum_probs=230.6
Q ss_pred CCCCCCCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhcc
Q 017189 1 MASAQSQEDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGI 79 (375)
Q Consensus 1 M~~~~~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~ 79 (375)
|++.+..|+.+.++. ++||++||| ||++.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....
T Consensus 1 ~~~~~~~~~~i~~~~~~~gV~~itl-rp~~~Nal~~~m~~el~~~~~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~~ 79 (263)
T d1wz8a1 1 LASLEARYPGLAFAWPRPGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMR 79 (263)
T ss_dssp CHHHHHHCTTEEEEEEETTEEEEEE-CCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHHH
T ss_pred CCccccCCCeEEEEEcCCCEEEEEE-CCCCCCCCCHHHHHHHHHHHHHHhhCCCCeEEEEecccccccccchhhhhhhhc
Confidence 455566788999987 779999999 899999999999999999999999999999999999999999999999986542
Q ss_pred ch--h-hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc
Q 017189 80 NE--G-AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLP 156 (375)
Q Consensus 80 ~~--~-~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~ 156 (375)
.. . ..+....++++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~~ 159 (263)
T d1wz8a1 80 ASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLV 159 (263)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHH
T ss_pred ccccccccchhhhhHHHHHhhhhhcceeeecccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 22 1 45566778889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred h-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHH
Q 017189 157 G-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDK 235 (375)
Q Consensus 157 g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (375)
| ..+++|+++|++++|++|+++||||+|||++++.. ++.
T Consensus 160 G~~~a~~l~l~g~~i~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------- 199 (263)
T d1wz8a1 160 GMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVYE--KAL-------------------------------------- 199 (263)
T ss_dssp CHHHHHHHHHHTCCEEHHHHHHHTSSSEEECGGGHHH--HHH--------------------------------------
T ss_pred ccchhhhhcccccccchhHHHhcCCcccccchhhhhH--HHH--------------------------------------
Confidence 9 67999999999999999999999999999988743 222
Q ss_pred HhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHH
Q 017189 236 CFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFF 315 (375)
Q Consensus 236 ~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~ 315 (375)
+.+++|++.||.+++.+|+++++.....+ +.++.|...+..++.+ +|++
T Consensus 200 ---------------------------~~a~~la~~~~~al~~~K~~l~~~~~~~~-~~~~~e~~~~~~~~~s---~d~~ 248 (263)
T d1wz8a1 200 ---------------------------EVAERLAQGPKEALHHTKHALNHWYRSFL-PHFELSLALEFLGFSG---KELE 248 (263)
T ss_dssp ---------------------------HHHHHHHTSCHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHGGGS---HHHH
T ss_pred ---------------------------HHHHHhhccHHHHHHHHHHHHHHHHhChH-HHHHHHHHHHHHHccC---HHHH
Confidence 33789999999999999999998877555 5689999999888875 4999
Q ss_pred hhHhhhhccCCCCCCCC
Q 017189 316 EGCRAILLDKDKNPKWK 332 (375)
Q Consensus 316 egv~A~l~ek~r~P~w~ 332 (375)
||++|| +|| |+|+|.
T Consensus 249 Egi~Af-~eK-R~P~f~ 263 (263)
T d1wz8a1 249 EGLKAL-KEK-RPPEFP 263 (263)
T ss_dssp HHHHHH-HTT-SCCCCC
T ss_pred HHHHHH-hCC-CCCCCC
Confidence 999999 599 899993
|
| >d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: 4-Chlorobenzoyl-CoA dehalogenase species: Pseudomonas sp., strain CBS-3 [TaxId: 306]
Probab=100.00 E-value=1.5e-55 Score=412.86 Aligned_cols=258 Identities=21% Similarity=0.280 Sum_probs=233.7
Q ss_pred CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh----
Q 017189 7 QEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---- 82 (375)
Q Consensus 7 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---- 82 (375)
+|+.|.++.++||++||||||++.|+||.+|+.+|.++++.+++|+++++|||||.|+.||+|+|++++.......
T Consensus 1 my~~i~~~i~dgVa~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~i~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 80 (269)
T d1nzya_ 1 MYEAIGHRVEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRD 80 (269)
T ss_dssp CCSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHH
T ss_pred CCCceEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCcccccchhhHHHHhhcccccchhh
Confidence 3678999999999999999999999999999999999999999999999999999999999999999885432211
Q ss_pred --hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HH
Q 017189 83 --AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FF 159 (375)
Q Consensus 83 --~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~ 159 (375)
..+...++.++.++.++||||||+|||+|+|||++|+++||+||++++++|++||.++|++|++|+++++++++| .+
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~~~~~~~~~g~~~~~g~~~~l~~~ig~~~ 160 (269)
T d1nzya_ 81 HFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRR 160 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcchhehhhhhhcCCCceeeeecccHhhhhhhhhhcccccccccccccccccccccccChhh
Confidence 233445668889999999999999999999999999999999999999999999999999999999999999999 67
Q ss_pred HHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCc
Q 017189 160 GEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSR 239 (375)
Q Consensus 160 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~ 239 (375)
++++++||+.++|+||+++||||+||+++++.+ ++.
T Consensus 161 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------ 196 (269)
T d1nzya_ 161 AMELMLTNRTLYPEEAKDWGLVSRVYPKDEFRE--VAW------------------------------------------ 196 (269)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHH--HHH------------------------------------------
T ss_pred hhhccccccccchhHHHHcCCcccccccccccc--chh------------------------------------------
Confidence 999999999999999999999999999887743 222
Q ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 240 RTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 240 ~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+.+++|++.||.+++.+|+.+++....+++++++.|.+.+...+.++ |++|||+
T Consensus 197 -----------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~---~~~e~v~ 250 (269)
T d1nzya_ 197 -----------------------KVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASVTHP---HFMPCLT 250 (269)
T ss_dssp -----------------------HHHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHST---THHHHHH
T ss_pred -----------------------hhhhhhhhhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcCH---HHHHHHH
Confidence 22688999999999999999999999999999999999999999866 9999999
Q ss_pred hhhccCCCCCCCCCCCc
Q 017189 320 AILLDKDKNPKWKPSKL 336 (375)
Q Consensus 320 A~l~ek~r~P~w~~~~~ 336 (375)
+| +|| |+|+|.+..+
T Consensus 251 af-lek-rkp~~~~~~~ 265 (269)
T d1nzya_ 251 RF-LDG-HRADRPQVEL 265 (269)
T ss_dssp HH-HTT-CCTTCCSSCC
T ss_pred HH-HCC-CCCCcCCCCC
Confidence 99 599 8999987654
|
| >d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: AUH protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-56 Score=415.11 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=228.0
Q ss_pred eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AKFFSKEFILN 93 (375)
Q Consensus 16 ~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~~~~~~~~l~ 93 (375)
++||++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|.|++.+....... ..+...++.++
T Consensus 13 ~~gI~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~f~~g~d~~~~~~~~~~~~~~~~~~~~~~~ 92 (266)
T d1hzda_ 13 NRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVI 92 (266)
T ss_dssp GTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcceEEEeccccccccccccccccccccchhhhhhhhHHHHHH
Confidence 468999999999999999999999999999999999999999999998 6899999999887654433 55667788899
Q ss_pred HHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhcCCccCH
Q 017189 94 YLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLTGARLDG 172 (375)
Q Consensus 94 ~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A 172 (375)
..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++| .+++++++||+.++|
T Consensus 93 ~~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~ig~~~a~~l~ltg~~~~a 172 (266)
T d1hzda_ 93 NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDG 172 (266)
T ss_dssp HHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTCEEEH
T ss_pred HHHhcCCcccccccccccccccceeccccceeeecCCcEEeecccceeecCCccceeeehhhhHHHHHHhhhccCCccCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999 679999999999999
Q ss_pred HHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHHHHHhhc
Q 017189 173 AEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEILSALESE 252 (375)
Q Consensus 173 ~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~ 252 (375)
++|+++||||+|||++++.+ ..+
T Consensus 173 ~eA~~~Glv~~vv~~~~l~~--~~~------------------------------------------------------- 195 (266)
T d1hzda_ 173 KEAKAVGLISHVLEQNQEGD--AAY------------------------------------------------------- 195 (266)
T ss_dssp HHHHHHTSCSEEECCCTTSC--HHH-------------------------------------------------------
T ss_pred HHhhcccccccccChhhhhh--HHH-------------------------------------------------------
Confidence 99999999999999987621 222
Q ss_pred ccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccCCCCCCCC
Q 017189 253 STNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDKDKNPKWK 332 (375)
Q Consensus 253 ~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek~r~P~w~ 332 (375)
+++.+.+++++..||.+++.+|+++++....++.++++.|...+..++.+ +|++||++|| +|| |+|+|+
T Consensus 196 ------~~a~~~a~~i~~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s---~d~~Eg~~AF-~eK-R~P~f~ 264 (266)
T d1hzda_ 196 ------RKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPT---KDRLEGLLAF-KEK-RPPRYK 264 (266)
T ss_dssp ------HHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTC---HHHHHHHHHH-TTT-SCCCCC
T ss_pred ------HHHHHHHHhcccCChHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-hCC-CCCCCC
Confidence 23334578999999999999999999999999999999999999998865 5999999999 599 899999
Q ss_pred CC
Q 017189 333 PS 334 (375)
Q Consensus 333 ~~ 334 (375)
+|
T Consensus 265 Gk 266 (266)
T d1hzda_ 265 GE 266 (266)
T ss_dssp CC
T ss_pred CC
Confidence 86
|
| >d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Methylmalonyl CoA decarboxylase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-55 Score=412.09 Aligned_cols=256 Identities=21% Similarity=0.302 Sum_probs=221.0
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeC--CCCccccCCchhHhhccchhh
Q 017189 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK--GRAFCAGGDVAAVVRGINEGA 83 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~--g~~F~aG~Dl~~~~~~~~~~~ 83 (375)
|+|++|.++.+|+|++||||||+++|+||.+|+.+|.++|+++++ +++++|||+|. |++||+|+|++++.....+..
T Consensus 1 M~~~~i~~~~~~~v~~Itlnrp~~~Nal~~~~~~~l~~al~~~~~-~~~~~vVl~g~~g~~~F~aG~Dl~~~~~~~~~~~ 79 (261)
T d1ef8a_ 1 MSYQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNR-PEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPL 79 (261)
T ss_dssp CCCSSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCS-TTCCEEEEECCTTCSEEECCSCSTTC-----CTT
T ss_pred CCCCEEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeccccchhhcccccccccccCCcccc
Confidence 357889999999999999999999999999999999999999974 57999999986 479999999999866443333
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 84 KFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 84 ~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
.+...+++++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++|++| .++++
T Consensus 80 ~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~~~~pe~~~Gl~~~~~~~~~l~r~~g~~~a~~ 159 (261)
T d1ef8a_ 80 SYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKE 159 (261)
T ss_dssp CTTSHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHHHHH
T ss_pred ccccchhhhHHHHHhCchhhhhcccccccchhhhhhhhhhhhhhhHhHHHhhhhcccccccccccccccccccCcccccc
Confidence 34455678899999999999999999999999999999999999999999999999999999999999999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
+++||+.++|+||+++||||++++++++.+ .+.
T Consensus 160 ~~l~g~~~~a~eA~~~Glv~~vv~~~~~~~--~a~--------------------------------------------- 192 (261)
T d1ef8a_ 160 LIFTASPITAQRALAVGILNHVVEVEELED--FTL--------------------------------------------- 192 (261)
T ss_dssp HHHHCCCEEHHHHHHTTSCSEEECHHHHHH--HHH---------------------------------------------
T ss_pred ccccCceEcHHHHHHcCCcceeeechhhhh--hhH---------------------------------------------
Confidence 999999999999999999999999887743 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCH--HHHHHHHHHHHHHHhhCCCcchHHhhHhh
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGV--GQCLIREYRMVCHVMMGEVSKDFFEGCRA 320 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l--~~~l~~e~~~~~~~~~~~~s~d~~egv~A 320 (375)
+++++++..||.+++.+|+.++......+ ...++.+...+..++.+ +|++||++|
T Consensus 193 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s---~D~~Egi~A 249 (261)
T d1ef8a_ 193 --------------------QMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDS---EDYQEGMNA 249 (261)
T ss_dssp --------------------HHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTS---HHHHHHHHH
T ss_pred --------------------HHHHHHHhcCcHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHhCC---HHHHHHHHH
Confidence 33789999999999999999998765444 44555556667777764 599999999
Q ss_pred hhccCCCCCCCCCC
Q 017189 321 ILLDKDKNPKWKPS 334 (375)
Q Consensus 321 ~l~ek~r~P~w~~~ 334 (375)
| +|| |+|+|++.
T Consensus 250 f-leK-R~P~f~G~ 261 (261)
T d1ef8a_ 250 F-LEK-RKPNFVGH 261 (261)
T ss_dssp H-HTT-SCCCCCCC
T ss_pred H-hCC-CCCcCCCC
Confidence 9 599 89999973
|
| >d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-54 Score=408.04 Aligned_cols=255 Identities=21% Similarity=0.316 Sum_probs=227.2
Q ss_pred CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh----
Q 017189 8 EDQVLEEE-TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG---- 82 (375)
Q Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---- 82 (375)
|+++.++. +++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||||.|++||+|+|+.++.......
T Consensus 2 y~~l~~~~~~~~I~~itlnrP~~~Nals~~m~~el~~~l~~~~~d~~v~~vvltg~~~~F~aG~dl~~~~~~~~~~~~~~ 81 (275)
T d1dcia_ 2 YESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDD 81 (275)
T ss_dssp CSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSS
T ss_pred CceEEEEEccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccCccHHHhhhccccccccc
Confidence 67888755 8899999999999999999999999999999999999999999999999999999999886543211
Q ss_pred --------hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhh
Q 017189 83 --------AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSR 154 (375)
Q Consensus 83 --------~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~r 154 (375)
..+...+..++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~~~~~~~~~ 161 (275)
T d1dcia_ 82 VARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPK 161 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGG
T ss_pred ccchhhhhccchhhhHHHHHHHHhcCCCEEEEEeeEeehhhHHHHhhcCchhhccCccccchhccccccccccccccccc
Confidence 233445567888899999999999999999999999999999999999999999999999999999999999
Q ss_pred cch-HH-HHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHH
Q 017189 155 LPG-FF-GEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDV 232 (375)
Q Consensus 155 l~g-~~-a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (375)
++| .. +.+++++|+.++|+||+++||||+|+|+++. +..+.
T Consensus 162 ~~g~~~~~~~ll~~g~~~~a~eA~~~Glv~~v~~~~~~--l~~~~----------------------------------- 204 (275)
T d1dcia_ 162 VIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDV--MLNAA----------------------------------- 204 (275)
T ss_dssp TCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHH--HHHHH-----------------------------------
T ss_pred ccccccccccccccccccchhhhccCCCceeeeehhhh--hhhcc-----------------------------------
Confidence 999 54 5689999999999999999999999997654 11222
Q ss_pred HHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcc
Q 017189 233 IDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSK 312 (375)
Q Consensus 233 i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~ 312 (375)
.+.+++|++.+|.+++.+|+.+++....+++++++.|.+.+..++.++
T Consensus 205 -----------------------------~~~a~~i~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~--- 252 (275)
T d1dcia_ 205 -----------------------------FALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYMATWNMSMLQTQ--- 252 (275)
T ss_dssp -----------------------------HHHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSH---
T ss_pred -----------------------------cccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCH---
Confidence 133789999999999999999999999999999999999999999754
Q ss_pred hHHhhHhhhhccCCCCCCCCC
Q 017189 313 DFFEGCRAILLDKDKNPKWKP 333 (375)
Q Consensus 313 d~~egv~A~l~ek~r~P~w~~ 333 (375)
|++|||+|| +|| |+|+|..
T Consensus 253 d~~Egi~Af-leK-R~pk~~~ 271 (275)
T d1dcia_ 253 DIIKSVQAA-MEK-KDSKSIT 271 (275)
T ss_dssp HHHHHHHHH-HTT-CCGGGCC
T ss_pred HHHHHHHHH-hCC-CCCCCCC
Confidence 999999999 599 8999974
|
| >d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Enoyl-CoA hydratase (crotonase) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.3e-54 Score=402.51 Aligned_cols=247 Identities=28% Similarity=0.388 Sum_probs=222.6
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh----hHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG----AKFF 86 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~----~~~~ 86 (375)
|.++ +|+|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|+.||+|+|++.+....... ..+.
T Consensus 2 v~ie-~G~va~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvl~g~g~~f~aG~dl~~~~~~~~~~~~~~~~~~ 80 (253)
T d1uiya_ 2 VQVE-KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRHS 80 (253)
T ss_dssp EEEE-CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHHH
T ss_pred EEEe-eCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEecccccccccchhHHhhhccccCcccccchh
Confidence 4565 4789999999999999999999999999999999999999999999999999999999876543322 4455
Q ss_pred HHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhh
Q 017189 87 SKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGL 165 (375)
Q Consensus 87 ~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~l 165 (375)
...+.++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|. |++++|+|++| .++++|++
T Consensus 81 ~~~~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~ria~~~a~~~~~e~~~g~~~~-~~~~~l~~~~g~~~a~~l~l 159 (253)
T d1uiya_ 81 LSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAA-LVSVILVRAVGEKAAKDLLL 159 (253)
T ss_dssp HHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCH-HHHHHHHHHSCHHHHHHHHH
T ss_pred hhhhhhhhHHhcCCCCEEEEeCeEEehhhHHHHhhhhhhhhhhhhHHhhhhcccccccc-cchhhhhcccCHHHHHHHhh
Confidence 66778889999999999999999999999999999999999999999999999998875 56788999999 67999999
Q ss_pred cCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHH
Q 017189 166 TGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEI 245 (375)
Q Consensus 166 tG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei 245 (375)
||++++|++|+++||||+|++++++.....
T Consensus 160 ~g~~~~a~eA~~~Glv~~v~~~~~~~~~a~-------------------------------------------------- 189 (253)
T d1uiya_ 160 TGRLVEAREAKALGLVNRIAPPGKALEEAK-------------------------------------------------- 189 (253)
T ss_dssp HCCEEEHHHHHHHTSCSEEECTTCHHHHHH--------------------------------------------------
T ss_pred cCcCCCHHHHHHhCCCcccccccccchhHH--------------------------------------------------
Confidence 999999999999999999999998743222
Q ss_pred HHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHhhhhccC
Q 017189 246 LSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCRAILLDK 325 (375)
Q Consensus 246 ~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~A~l~ek 325 (375)
+.++++++.||.++..+|+++++....++++++..|.+.+..++.+ +|++||++|| +||
T Consensus 190 -----------------~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s---~d~~egi~af-~eK 248 (253)
T d1uiya_ 190 -----------------ALAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVRET---GDLAEGIRAF-FEK 248 (253)
T ss_dssp -----------------HHHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGC---HHHHHHHHHH-HTT
T ss_pred -----------------HHHHhhcccchHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHH-hCC
Confidence 3378999999999999999999999999999999999999999975 4999999999 599
Q ss_pred CCCCCC
Q 017189 326 DKNPKW 331 (375)
Q Consensus 326 ~r~P~w 331 (375)
|+|+|
T Consensus 249 -R~P~f 253 (253)
T d1uiya_ 249 -RPPRF 253 (253)
T ss_dssp -SCCCC
T ss_pred -CCCCC
Confidence 89998
|
| >d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Naphthoate synthase MenB species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2.2e-52 Score=396.70 Aligned_cols=255 Identities=19% Similarity=0.290 Sum_probs=210.6
Q ss_pred CCCCcEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeC-------CCCccccCCchhHh
Q 017189 6 SQEDQVLEEE--TSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGK-------GRAFCAGGDVAAVV 76 (375)
Q Consensus 6 ~~~~~v~~~~--~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~-------g~~F~aG~Dl~~~~ 76 (375)
+++..|.+++ ++||++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||. |+.||+|.|++...
T Consensus 15 ~~~~~i~~~~~~~~gi~~ItlnRP~~~NAl~~~m~~eL~~~l~~~~~d~~vr~vVltg~~~~f~~gG~~f~ag~Dl~~~~ 94 (297)
T d1q52a_ 15 DDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRG 94 (297)
T ss_dssp TTCSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC------
T ss_pred CCCcceEEEEEccCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCccEEEEecCCCcccchhhhhhhcchhhhhc
Confidence 3466788987 48999999999999999999999999999999999999999999997 45678888887654
Q ss_pred hccchh------------hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCC
Q 017189 77 RGINEG------------AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLF 143 (375)
Q Consensus 77 ~~~~~~------------~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~ 143 (375)
...... ......+..+...|..+||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GGG~~lal~~D~~ia~~~~~~f~~pe~~~Gl~ 174 (297)
T d1q52a_ 95 RSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSF 174 (297)
T ss_dssp -----------------------CHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCGGGGTCC
T ss_pred ccccccccccccchhhhHHHHHHHHHHHHHHHHhcCCeEEEEEcceeeeccchhhhhhhccccccccccceeeeeccccc
Confidence 322110 222334567888899999999999999999999999999999999875 5799999999999
Q ss_pred CCccHHHHHhhcch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCC
Q 017189 144 PDIGASYFLSRLPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLK 222 (375)
Q Consensus 144 p~~g~~~~l~rl~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (375)
|++|++++|+|++| ..++++++||+.++|+||+++||||+|||++++.....
T Consensus 175 p~~~~~~~L~r~iG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~el~~~~~--------------------------- 227 (297)
T d1q52a_ 175 DGGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGL--------------------------- 227 (297)
T ss_dssp CCSTTTHHHHHHHCHHHHHHHHHHCCEECHHHHHHHTSCSEEECGGGHHHHHH---------------------------
T ss_pred cccccccccccccCccceeeccccccccchHhhhhhccccccCchHHhhHHHH---------------------------
Confidence 99999999999999 67999999999999999999999999999998844222
Q ss_pred cchhhhHHHHHHHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHH
Q 017189 223 DHSAYHWMDVIDKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMV 302 (375)
Q Consensus 223 ~~~~~~~~~~i~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~ 302 (375)
+.++++++.||.+++.+|++++... ..+.+....|.+.+
T Consensus 228 ----------------------------------------~~a~~l~~~~~~a~~~~K~~~~~~~-~~~~~~~~~~~~~~ 266 (297)
T d1q52a_ 228 ----------------------------------------QWAAEINAKSPQAQRMLKFAFNLLD-DGLVGQQLFAGEAT 266 (297)
T ss_dssp ----------------------------------------HHHHHHHTSCHHHHHHHHHHHHHTT-THHHHHHHHHHHHH
T ss_pred ----------------------------------------HHhhhhccCCHHHHHHHHHHHHHhh-cChHHHHHHHHHHH
Confidence 2378999999999999999998755 45655666677777
Q ss_pred HHHhhCCCcchHHhhHhhhhccCCCCCCCCC
Q 017189 303 CHVMMGEVSKDFFEGCRAILLDKDKNPKWKP 333 (375)
Q Consensus 303 ~~~~~~~~s~d~~egv~A~l~ek~r~P~w~~ 333 (375)
..++.+ +|++||++|| +|| |+|+|++
T Consensus 267 ~~~~~s---~d~~Egv~AF-~eK-R~P~f~~ 292 (297)
T d1q52a_ 267 RLAYMT---DEAVEGRDAF-LQK-RPPDWSP 292 (297)
T ss_dssp HHHHTS---HHHHHHHHHH-HTT-SCCCCTT
T ss_pred HHHhcC---HHHHHHHHHH-hCC-CCCCCCC
Confidence 777754 5999999999 599 8999975
|
| >d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-51 Score=375.33 Aligned_cols=237 Identities=19% Similarity=0.276 Sum_probs=211.6
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-----
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG----- 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~----- 82 (375)
|++|.++++++|++||||||++.|++|.+|+.+|.++++.++.|+.+ +||++|.|++||+|+|++++.......
T Consensus 2 ~~~i~~~~~~gi~~Itlnrp~~~Nals~~~~~~l~~~l~~~~~d~~v-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 80 (245)
T d2f6qa1 2 FETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKA 80 (245)
T ss_dssp CSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHH
T ss_pred cceEEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCce-EEeecCCCccccCCccchhhhccccccccccc
Confidence 67899999999999999999999999999999999999999999876 899999999999999999986654322
Q ss_pred hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 83 AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 83 ~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
..+.....+++.+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++| .+++
T Consensus 81 ~~~~~~~~~~~~~i~~~~kpvIa~v~G~a~GgG~~la~~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~g~~~a~ 160 (245)
T d2f6qa1 81 KNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKAT 160 (245)
T ss_dssp HHHHHHHHHHHHHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHH
T ss_pred chhhhHHHHHHhhhhhcCCceEEEECCccccccccchhhhhhhhhhccCeEecccccCCCCccccchhhcccccccchhh
Confidence 234445567888999999999999999999999999999999999999999999999999999999999999999 6799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
+++++|+.++|+||+++||||+|||++++.. ++.
T Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~-------------------------------------------- 194 (245)
T d2f6qa1 161 EMLIFGKKLTAGEACAQGLVTEVFPDSTFQK--EVW-------------------------------------------- 194 (245)
T ss_dssp HHHTTCCCEEHHHHHHTTSCSEEECTTTHHH--HHH--------------------------------------------
T ss_pred hhcccccccccccccccccccccCCcchHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999998844 222
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHH
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFF 315 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~ 315 (375)
+.++++++.||.+++.+|+++++.....+++.++.|...+..+|.++ |++
T Consensus 195 ---------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~---d~~ 244 (245)
T d2f6qa1 195 ---------------------TRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRWLSD---ECT 244 (245)
T ss_dssp ---------------------HHHHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSH---HHH
T ss_pred ---------------------HHHHHHHcCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHhcCc---ccC
Confidence 22789999999999999999999988899999999999999999754 775
|
| >d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Fatty oxidation complex alpha subunit, N-terminal domain species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=2.4e-49 Score=377.67 Aligned_cols=285 Identities=16% Similarity=0.190 Sum_probs=220.4
Q ss_pred CCcEEEEE-eCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh---
Q 017189 8 EDQVLEEE-TSFVRILTLN-RPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG--- 82 (375)
Q Consensus 8 ~~~v~~~~-~~~v~~itln-rp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--- 82 (375)
++.|.+++ ++||++|+|| ||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.......
T Consensus 5 ~~~i~~~~~~~gva~i~ln~~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 84 (310)
T d1wdka4 5 GKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAE 84 (310)
T ss_dssp CSSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTSCHHH
T ss_pred CceEEEEEecCCEEEEEECCCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccchhhhhhhhhcccccchh
Confidence 45788887 7889999998 899999999999999999999999999999999999999999999999986543321
Q ss_pred -hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHH
Q 017189 83 -AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFG 160 (375)
Q Consensus 83 -~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a 160 (375)
.......++++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| ..+
T Consensus 85 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~elal~cD~ria~~~a~f~~pe~~~Gl~P~~gg~~~L~r~iG~~~a 164 (310)
T d1wdka4 85 LIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNA 164 (310)
T ss_dssp HHHHHHHHHHHHHHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred hhhhhhHHHHHHHHhhcCCccceeeccccccccccccchhhhhhhccccceecccccccCCCccccchhhhhhhhhhhhh
Confidence 233345678889999999999999999999999999999999999999999999999999999999999999999 579
Q ss_pred HHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHh-cCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCc
Q 017189 161 EYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYK-VNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSR 239 (375)
Q Consensus 161 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~ 239 (375)
+++++||+.++|+||+++||||+|||++++......+.+ +.+..+........ ..+.+..
T Consensus 165 ~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~~~~~~~~~~~~~~-------------------~~~~~~~ 225 (310)
T d1wdka4 165 VEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQP-------------------KLEKLKL 225 (310)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHHGG-------------------GGSCCSC
T ss_pred hhhhccccccCHHHHhhccCccEEccHHHHHHHHHHHHHHHHhcccchhhhhhh-------------------hcccccc
Confidence 999999999999999999999999999998554443321 11111000000000 0000011
Q ss_pred CCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 240 RTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 240 ~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+.+++.+. + ..+...+.++...+.| +...+.+.++.+...+++++|+.|.+.+..++.++ +.+++++
T Consensus 226 ~~~~~~~~-~--------~~~~~~~~~~~~~~~p-A~~~~l~~v~~~~~~~~~~~L~~E~~~f~~l~~t~---~a~~~i~ 292 (310)
T d1wdka4 226 NAIEQMMA-F--------ETAKGFVAGQAGPNYP-APVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS---ASNCLIG 292 (310)
T ss_dssp CHHHHHHH-H--------HHHHHHHHHHHCTTCH-HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSH---HHHHHHH
T ss_pred cchhhhHH-H--------HHhhhhhhhhccCCCh-HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCH---HHHHHHH
Confidence 11111110 0 0111122334444455 44455688888989999999999999999999765 9999999
Q ss_pred hhhccC
Q 017189 320 AILLDK 325 (375)
Q Consensus 320 A~l~ek 325 (375)
+|| +|
T Consensus 293 aF~-~k 297 (310)
T d1wdka4 293 LFL-ND 297 (310)
T ss_dssp HHH-HH
T ss_pred HHH-hh
Confidence 995 66
|
| >d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Carbapenem biosynthes protein CarB species: Pectobacterium carotovorum [TaxId: 554]
Probab=100.00 E-value=7.2e-49 Score=359.23 Aligned_cols=222 Identities=21% Similarity=0.290 Sum_probs=197.5
Q ss_pred EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh--hHHHH
Q 017189 11 VLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG--AKFFS 87 (375)
Q Consensus 11 v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~--~~~~~ 87 (375)
+..+.+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|.|++++....... ..+..
T Consensus 2 ~~~~~~d~I~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~i~~vVl~~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~ 81 (230)
T d2a7ka1 2 VFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWID 81 (230)
T ss_dssp EEEEEETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHH
T ss_pred EEEEecCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCcccccceeccchhhhhhhcccccccccccccccccchh
Confidence 34566899999999999999999999999999999999999999999999988 8999999999987654322 55667
Q ss_pred HHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-HHHHHHhhc
Q 017189 88 KEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-FFGEYVGLT 166 (375)
Q Consensus 88 ~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-~~a~~l~lt 166 (375)
.+.+++.++.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+ ++|++++| ..++++++|
T Consensus 82 ~~~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~-~~l~~~iG~~~a~~l~l~ 160 (230)
T d2a7ka1 82 RVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGA-AILGFTHGFSTMQEIIYQ 160 (230)
T ss_dssp HHHHHHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHH-HHHHHHHCHHHHHHHHHH
T ss_pred hhhhhhhcccchhcceeeecccccccccccchhccchhhccccchhhhccccccccccccc-cccccccccccccccccc
Confidence 7888999999999999999999999999999999999999999999999999999998775 57999999 679999999
Q ss_pred CCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCHHHHH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTVEEIL 246 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~ei~ 246 (375)
|+.++|+||+++||||+|||++++.. ++.
T Consensus 161 g~~~~a~eA~~~Glv~~vv~~~~l~~--~a~------------------------------------------------- 189 (230)
T d2a7ka1 161 CQSLDAPRCVDYRLVNQVVESSALLD--AAI------------------------------------------------- 189 (230)
T ss_dssp CCCBCHHHHHHHTCCSEEECHHHHHH--HHH-------------------------------------------------
T ss_pred cccchHHHHHHhhhcccCCChHHHHH--HHH-------------------------------------------------
Confidence 99999999999999999999887633 222
Q ss_pred HHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHH
Q 017189 247 SALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYR 300 (375)
Q Consensus 247 ~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~ 300 (375)
+.+++|++.||.+++.+|+++++.....+++.++.|..
T Consensus 190 ----------------~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~a 227 (230)
T d2a7ka1 190 ----------------TQAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASKA 227 (230)
T ss_dssp ----------------HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHcCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 23789999999999999999999887778888776654
|
| >d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=3.4e-49 Score=365.59 Aligned_cols=240 Identities=19% Similarity=0.248 Sum_probs=213.9
Q ss_pred CcEEEEEe--CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCC-CCccccCCchhHhhccchh-hH
Q 017189 9 DQVLEEET--SFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEG-AK 84 (375)
Q Consensus 9 ~~v~~~~~--~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~-~~ 84 (375)
+.|.++.+ +||++||||||+ .|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++....... ..
T Consensus 2 ~~ilve~~~~~gIa~itln~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~Fs~G~Dl~~~~~~~~~~~~~ 80 (249)
T d1sg4a1 2 QRVLVEPDAGAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRSPAHYAG 80 (249)
T ss_dssp CSEEEEEETTTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCCHHHHHH
T ss_pred CcEEEEEECCCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHHhCCCccEEEEEeccceeEecccccccccccccccccc
Confidence 45666664 789999999996 6999999999999999999999999999999998 5799999999986544332 56
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEE--eccccccCCCCCccHHHHHhhcch-HHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVF--AMPETALGLFPDIGASYFLSRLPG-FFGE 161 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f--~~pe~~~G~~p~~g~~~~l~rl~g-~~a~ 161 (375)
++..+++++.++.++||||||+|||+|+|||++|+++||+|||+++++| ++||+++|++|++|++++|++++| ..++
T Consensus 81 ~~~~~~~~~~~l~~~~kpvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~ 160 (249)
T d1sg4a1 81 YWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAE 160 (249)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHH
T ss_pred cchhhHHHHHhhhcCccccchhhcccccccccccccccccceeecccccccccccccccccccccccccccccccccccc
Confidence 6778888999999999999999999999999999999999999999876 789999999999999999999999 5799
Q ss_pred HHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCC
Q 017189 162 YVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRT 241 (375)
Q Consensus 162 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~ 241 (375)
++++||++++|++|+++||||+++|++++.. ++.
T Consensus 161 ~lll~g~~~~a~~A~~~Glv~~v~~~~~l~~--~a~-------------------------------------------- 194 (249)
T d1sg4a1 161 RALQLGLLFPPAEALQVGIVDQVVPEEQVQS--TAL-------------------------------------------- 194 (249)
T ss_dssp HHHHHTCCBCHHHHHHHTSSSEEECGGGHHH--HHH--------------------------------------------
T ss_pred ccccccccccHHHHHhhccccccCChHHHHH--HHH--------------------------------------------
Confidence 9999999999999999999999999988744 222
Q ss_pred HHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhCCCcchHHhhHh
Q 017189 242 VEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVMMGEVSKDFFEGCR 319 (375)
Q Consensus 242 ~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~~~~~s~d~~egv~ 319 (375)
+.++++++.||.+++.+|+++++.....+.+.++.|.+.+...+.+ +++++|++
T Consensus 195 ---------------------~~a~~l~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~~~---e~~~~~le 248 (249)
T d1sg4a1 195 ---------------------SAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFISK---DSIQKSLQ 248 (249)
T ss_dssp ---------------------HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTS---HHHHHHHT
T ss_pred ---------------------HHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCC---HHHHHhcC
Confidence 2278999999999999999999988889999999999999888754 48888774
|
| >d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-48 Score=365.12 Aligned_cols=238 Identities=16% Similarity=0.166 Sum_probs=201.0
Q ss_pred CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-----
Q 017189 8 EDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG----- 82 (375)
Q Consensus 8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~----- 82 (375)
++.|.++.+|+|++||||||+++|++|.+|+.+|.++++.++.|+++++|||||+|++||+|+|++++.......
T Consensus 4 ~e~i~~~~~~~v~~Itlnrp~~~Na~~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~ 83 (266)
T d1pjha_ 4 NEKISYRIEGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYP 83 (266)
T ss_dssp BTTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCS
T ss_pred CCeEEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccchhHHHHHhcccccccccc
Confidence 567999999999999999999999999999999999999999999999999999999999999999986543211
Q ss_pred -------hHHHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEe-CCeEEeccccccCCCCCccHHHHHhh
Q 017189 83 -------AKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVAT-ENSVFAMPETALGLFPDIGASYFLSR 154 (375)
Q Consensus 83 -------~~~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~-~~a~f~~pe~~~G~~p~~g~~~~l~r 154 (375)
..+......++..+.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a~GgG~~lal~~D~~ia~~~~~~~~~pe~~lGl~p~~g~~~~l~r 163 (266)
T d1pjha_ 84 SETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPL 163 (266)
T ss_dssp SHHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHhcchhhhhhhhcccccccccchhccchhhhhhcccccccccccccccccccccccccc
Confidence 3355667778889999999999999999999999999999999996 56889999999999999999999999
Q ss_pred cch-HHHHHHhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHH
Q 017189 155 LPG-FFGEYVGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVI 233 (375)
Q Consensus 155 l~g-~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 233 (375)
++| ..+++|++||+.++|+||+++||||+|+++.++.. +++.
T Consensus 164 ~~g~~~a~~llltg~~~~a~eA~~~Glv~~v~~~~~~~~--~~~~----------------------------------- 206 (266)
T d1pjha_ 164 KFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNA--EAFN----------------------------------- 206 (266)
T ss_dssp HHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCH--HHHH-----------------------------------
T ss_pred ccccchhhhhhccCCcCCHHHHHHCCCEeEeeCchhhhH--HHHH-----------------------------------
Confidence 999 67999999999999999999999999998766521 2220
Q ss_pred HHHhCcCCHHHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHh
Q 017189 234 DKCFSRRTVEEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIREYRMVCHVM 306 (375)
Q Consensus 234 ~~~f~~~~~~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e~~~~~~~~ 306 (375)
.+.+.++++.+...++.++..+|++++......+..++..|.......|
T Consensus 207 ------------------------~~~~~~l~~~~~~~~~~s~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~f 255 (266)
T d1pjha_ 207 ------------------------AKVLEELREKVKGLYLPSCLGMKKLLKSNHIDAFNKANSVEVNESLKYW 255 (266)
T ss_dssp ------------------------HHHHHHHHHHHTTCCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 0122244678888999999999999988766666666555555444444
|
| >d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Crotonase-like domain: 6-oxo camphor hydrolase species: Rhodococcus erythropolis [TaxId: 1833]
Probab=100.00 E-value=1.3e-47 Score=354.96 Aligned_cols=225 Identities=18% Similarity=0.237 Sum_probs=199.5
Q ss_pred CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchh-hH
Q 017189 6 SQEDQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEG-AK 84 (375)
Q Consensus 6 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~ 84 (375)
.+|++|.++++|+|++||||||++.|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++....... ..
T Consensus 10 ~~y~~i~~~~~~~v~~itln~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~ 89 (249)
T d1szoa_ 10 QKYENIRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLGTPHDWDE 89 (249)
T ss_dssp TSCTTEEEEEETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCSSHHHHHH
T ss_pred CCCCeEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcceEeeecccccccccchhhhhhcccccchhh
Confidence 46889999999999999999999999999999999999999999999999999999999999999999985543332 55
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEe-ccccccCCCCCccHHHHHhhcch-HHHHH
Q 017189 85 FFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFA-MPETALGLFPDIGASYFLSRLPG-FFGEY 162 (375)
Q Consensus 85 ~~~~~~~l~~~i~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~-~pe~~~G~~p~~g~~~~l~rl~g-~~a~~ 162 (375)
+...++.++..+.++||||||+|||+|. ||++|+++||+||++++++|. +||+++|++|++|++++++|++| ..+++
T Consensus 90 ~~~~~~~l~~~i~~~~~pvIa~v~g~~~-GG~~l~l~~D~ria~~~a~f~~~pe~~~g~~p~~g~~~~l~r~ig~~~a~~ 168 (249)
T d1szoa_ 90 IIFEGQRLLNNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRY 168 (249)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHH
T ss_pred hhhhhhhhhhhcccCcccceeeeccccc-cccccccccccccccCCcEEEEeeccccccccccccccccccccCccceee
Confidence 6667788999999999999999999885 477999999999999999995 79999999999999999999999 67999
Q ss_pred HhhcCCccCHHHHHHcCccceecCCccHHHHHHHHHhcCCCChHHHHHHHHHhccCCCCCcchhhhHHHHHHHHhCcCCH
Q 017189 163 VGLTGARLDGAEMRACGLATHFVPSSRLALLEEALYKVNSSDPAVISAVIDKFSLEPYLKDHSAYHWMDVIDKCFSRRTV 242 (375)
Q Consensus 163 l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~ 242 (375)
|++||++++|+||+++||||+|||++++.. ++.
T Consensus 169 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~--~a~--------------------------------------------- 201 (249)
T d1szoa_ 169 FLLTGQELDARTALDYGAVNEVLSEQELLP--RAW--------------------------------------------- 201 (249)
T ss_dssp HHHTTCEEEHHHHHHHTSCSEEECHHHHHH--HHH---------------------------------------------
T ss_pred ecccCCCCCHHHHHHhCCcCcccCHHHHHH--HHH---------------------------------------------
Confidence 999999999999999999999999887633 222
Q ss_pred HHHHHHHhhcccccccHHHHHHHHHHHhcCCchHHHHHHHHHhhhcCCHHHHHHHH
Q 017189 243 EEILSALESESTNRADAWISDAIQSLKKASPTSLKISLRSIREGRLQGVGQCLIRE 298 (375)
Q Consensus 243 ~ei~~~L~~~~~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~l~~e 298 (375)
+.++++++.||.+++.+|+++++.....++..++.+
T Consensus 202 --------------------~~a~~la~~~~~a~~~~K~~l~~~~~~~~e~~l~~~ 237 (249)
T d1szoa_ 202 --------------------ELARGIAEKPLLARRYARKVLTRQLRRVMEADLSLG 237 (249)
T ss_dssp --------------------HHHHHHHTSCHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred --------------------HHHHHHHcCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 337899999999999999999887665565555443
|
| >d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.18 E-value=1.1e-05 Score=68.42 Aligned_cols=135 Identities=15% Similarity=0.122 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHhhcCC--CceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 33 LSAQMISRLLELFQRYETDS--NVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~--~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
+|.++..++...|..++.++ ..=-+.|.+. |+|+... ..++..|..++.||...+.|.
T Consensus 22 I~~~~~~~~i~~l~~l~~~~~~~~I~l~InS~------GG~v~~g--------------l~i~d~i~~~~~~v~t~~~G~ 81 (179)
T d2cbya1 22 VNDEIANRLCAQILLLAAEDASKDISLYINSP------GGSISAG--------------MAIYDTMVLAPCDIATYAMGM 81 (179)
T ss_dssp BCHHHHHHHHHHHHHHHHHCSSSCEEEEEEEC------CBCHHHH--------------HHHHHHHHHCSSCEEEEEEEE
T ss_pred ECHHHHHHHHHHHHHHhccCCCCeEEEEeeCC------CCCHHHH--------------HHHHHHHHhhccceeeehhhh
Confidence 78999999988876655332 2223344544 3443221 234556778899999999999
Q ss_pred cchhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccHH---------------HHHhhcch-H--HHHHHhhcCCcc
Q 017189 111 VMGGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGAS---------------YFLSRLPG-F--FGEYVGLTGARL 170 (375)
Q Consensus 111 a~GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~~---------------~~l~rl~g-~--~a~~l~ltG~~i 170 (375)
|.+.|.-+++++| .|++.++++|-+.+...|..-...-. ..+.+..| . .-...+-.-.-+
T Consensus 82 aaS~a~~il~ag~k~~R~~~~~s~~miH~~~~~~~G~~~~i~~~~~~l~~~~~~i~~i~a~~tg~~~~~i~~~~~~d~~l 161 (179)
T d2cbya1 82 AASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWF 161 (179)
T ss_dssp EETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEE
T ss_pred hhhHHHHHHHcCCCCceEECCchHhhcCCCchhcCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhhcCCcee
Confidence 9999999999999 89999999999888765553211100 00111112 1 123344455669
Q ss_pred CHHHHHHcCccceecCC
Q 017189 171 DGAEMRACGLATHFVPS 187 (375)
Q Consensus 171 ~A~eA~~~GLv~~vv~~ 187 (375)
+|+||+++||||+|+..
T Consensus 162 ~a~EA~~~GliDeIi~~ 178 (179)
T d2cbya1 162 TAAEALEYGFVDHIITR 178 (179)
T ss_dssp EHHHHHHHTSCSEECSC
T ss_pred cHHHHHHcCCCcEEecC
Confidence 99999999999999975
|
| >d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Escherichia coli [TaxId: 562]
Probab=98.13 E-value=6.1e-06 Score=70.18 Aligned_cols=135 Identities=16% Similarity=0.106 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHhhcCCCc--eEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 33 LSAQMISRLLELFQRYETDSNV--KLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d~~v--r~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
++.++..++...+..++.++.. =.|.|.+. |+|+.. ...++..|..++.||+..+.|.
T Consensus 25 I~~~~~~~~i~~l~~l~~~~~~~~I~l~InS~------GG~v~~--------------g~~i~d~i~~~~~~v~tv~~G~ 84 (183)
T d1yg6a1 25 VEDHMANLIVAQMLFLEAENPEKDIYLYINSP------GGVITA--------------GMSIYDTMQFIKPDVSTICMGQ 84 (183)
T ss_dssp BCHHHHHHHHHHHHHHHHHCSSSCEEEEEEEC------CBCHHH--------------HHHHHHHHHHSSSCEEEEEEEE
T ss_pred ECHHHHHHHHHHHHHhhhhccCCceEEEEeCC------CccHHH--------------HHHHHHHHHhCCCCEEEEEEEE
Confidence 7889999998888877643321 22334544 344322 1335567788999999999999
Q ss_pred cchhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccHHH---------------HHhhcch-H--HHHHHhhcCCcc
Q 017189 111 VMGGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGASY---------------FLSRLPG-F--FGEYVGLTGARL 170 (375)
Q Consensus 111 a~GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~~~---------------~l~rl~g-~--~a~~l~ltG~~i 170 (375)
|.+.|.-|++++| .|++.++++|-+.+...|..-...-.. .+....| . .-..++-.-.-+
T Consensus 85 aaS~a~~I~~ag~~~~R~~~~ns~~miH~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~tg~~~e~i~~~~~~d~~l 164 (183)
T d1yg6a1 85 AASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFL 164 (183)
T ss_dssp EETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTSSCEEE
T ss_pred eHHHHHHHHHcCCCCceeeCCCceEEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhccCccc
Confidence 9999999999998 799999999998888766531111000 0111112 1 122332222337
Q ss_pred CHHHHHHcCccceecCC
Q 017189 171 DGAEMRACGLATHFVPS 187 (375)
Q Consensus 171 ~A~eA~~~GLv~~vv~~ 187 (375)
+|+||+++||||+|++.
T Consensus 165 ta~EAl~~GliD~Ii~~ 181 (183)
T d1yg6a1 165 SAPEAVEYGLVDSILTH 181 (183)
T ss_dssp EHHHHHHHTSSSEECCC
T ss_pred cHHHHHHcCCCcEEecc
Confidence 99999999999999975
|
| >d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Plasmodium falciparum [TaxId: 5833]
Probab=97.93 E-value=0.00012 Score=62.33 Aligned_cols=134 Identities=12% Similarity=0.174 Sum_probs=90.2
Q ss_pred CCHHHHHHHHHHHHHhhcC--CCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 33 LSAQMISRLLELFQRYETD--SNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d--~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
+|.++..++...|..++.. ..+. |.|.+ .|+|+.. ...++..+..++.||...+.|.
T Consensus 27 Id~~~~~~~i~~l~~l~~~~~~~I~-l~INS------~GG~v~~--------------g~ai~d~i~~~~~~v~tv~~G~ 85 (190)
T d2f6ia1 27 INKKTADELISQLLYLDNINHNDIK-IYINS------PGGSINE--------------GLAILDIFNYIKSDIQTISFGL 85 (190)
T ss_dssp BCHHHHHHHHHHHHHHHHHCCSCEE-EEEEE------CCBCHHH--------------HHHHHHHHHHSSSCEEEEEEEE
T ss_pred eCHHHHHHHHHHHHHHhccCCCCeE-EEEeC------chhhhhH--------------HHHHHHHHHhhCCceEEEEecc
Confidence 7899999999988877653 2343 33444 3444432 1235566778899999999999
Q ss_pred cchhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccH----HH-----------HHhhcch-H--HHHHHhhcCCcc
Q 017189 111 VMGGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGA----SY-----------FLSRLPG-F--FGEYVGLTGARL 170 (375)
Q Consensus 111 a~GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~----~~-----------~l~rl~g-~--~a~~l~ltG~~i 170 (375)
|.+.|..++++++ .|++.++++|-+.....|..-...- .. .+....| . .-...+-.-.-+
T Consensus 86 aaS~a~~i~~aG~kg~R~~~pns~imiH~~s~~~~G~~~di~~~~~~l~~~~~~~~~i~a~~tg~~~~~i~~~~~~d~~l 165 (190)
T d2f6ia1 86 VASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDRDYYM 165 (190)
T ss_dssp ECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTTCEE
T ss_pred ccchhHHHHHhCCCCccccCCCcEEEEcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhccCCeee
Confidence 9999999999988 6999999999999987776321110 00 1111122 1 122233333448
Q ss_pred CHHHHHHcCccceecCC
Q 017189 171 DGAEMRACGLATHFVPS 187 (375)
Q Consensus 171 ~A~eA~~~GLv~~vv~~ 187 (375)
+|+||+++||||+|+++
T Consensus 166 ~a~EAl~~GliD~Ii~~ 182 (190)
T d2f6ia1 166 NALEAKQYGIIDEVIET 182 (190)
T ss_dssp CHHHHHHHTSCSEECCC
T ss_pred cHHHHHHcCCCcEEccc
Confidence 99999999999999975
|
| >d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.93 E-value=7.5e-05 Score=63.69 Aligned_cols=135 Identities=14% Similarity=0.132 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHHHHhhc-CCC-ceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 33 LSAQMISRLLELFQRYET-DSN-VKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~-d~~-vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
++.++...+...|..++. |+. .=-+.|.+.| +|+.. ...++..|..++.||...+.|.
T Consensus 33 I~~~~~~~~~~~l~~l~~~~~~~~I~l~InS~G------G~v~~--------------glai~d~i~~~~~~v~t~~~G~ 92 (192)
T d1y7oa1 33 VEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPG------GSVSA--------------GLAIVDTMNFIKADVQTIVMGM 92 (192)
T ss_dssp BCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECC------BCHHH--------------HHHHHHHHHHSSSCEEEEEEEE
T ss_pred EchHHHHHHHHHHHHhhhhcccCceeeeecCCC------CCHHH--------------HHHHHHHHHhcCcceEEEeccc
Confidence 788999999888876653 321 2234445554 33221 1235566778999999999999
Q ss_pred cchhhhhhhhc--CCEEEEeCCeEEeccccccCCCCCccHH------HHH-----------hhcch-H--HHHHHhhcCC
Q 017189 111 VMGGGAGVSIH--GRFRVATENSVFAMPETALGLFPDIGAS------YFL-----------SRLPG-F--FGEYVGLTGA 168 (375)
Q Consensus 111 a~GgG~~Lala--~D~ria~~~a~f~~pe~~~G~~p~~g~~------~~l-----------~rl~g-~--~a~~l~ltG~ 168 (375)
|.+.|.-|+++ ++.|++.++++|-+.....|........ ..+ ....| . .-...+-.-.
T Consensus 93 aaS~as~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~~~~~~~~~~el~~~~~~i~~i~~~~tg~~~~~i~~~~~rd~ 172 (192)
T d1y7oa1 93 AASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAERDN 172 (192)
T ss_dssp EETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred cCCccceeeeecCCCccccchHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhhcCCc
Confidence 99999888775 5799999999999998877764321111 001 11112 1 1233444555
Q ss_pred ccCHHHHHHcCccceecCC
Q 017189 169 RLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 169 ~i~A~eA~~~GLv~~vv~~ 187 (375)
-++|+||+++||||+|+.+
T Consensus 173 ~lsa~EAleyGliD~Ii~~ 191 (192)
T d1y7oa1 173 WMSAQETLEYGFIDEIMAN 191 (192)
T ss_dssp CBCHHHHHHHTSCSEECCC
T ss_pred eecHHHHHHcCCCcEEecC
Confidence 6999999999999999865
|
| >d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Clp protease, ClpP subunit domain: Clp protease, ClpP subunit species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=97.79 E-value=0.00021 Score=60.83 Aligned_cols=132 Identities=13% Similarity=0.141 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHHHHhhcC-C--CceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 33 LSAQMISRLLELFQRYETD-S--NVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 33 l~~~~~~eL~~~l~~~~~d-~--~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
+|.++..++...|..++.. + .+.. .|.+.|+.+-+| ..++..|..++.||...+.|
T Consensus 35 I~~~~~~~~i~~l~~l~~~~~~~~I~l-~InS~GG~v~~g--------------------~~i~d~i~~~~~~V~tv~~G 93 (193)
T d1tg6a1 35 IDDSVASLVIAQLLFLQSESNKKPIHM-YINSPGGVVTAG--------------------LAIYDTMQYILNPICTWCVG 93 (193)
T ss_dssp BCHHHHHHHHHHHHHHHHHCSSSCEEE-EEEECCBCHHHH--------------------HHHHHHHHHSCSCEEEEEEE
T ss_pred EchHHHHHHHHHHHHhcccCCCcEEEE-EeecCcccHHHH--------------------HHHHHHHHhhcCceEEEEcc
Confidence 7888889888877776643 2 3443 345554322221 23556677899999999999
Q ss_pred ccchhhhhhhhcCC--EEEEeCCeEEeccccccCCCCCccHHHH-----------------Hhhcch-H--HHHHHhhcC
Q 017189 110 IVMGGGAGVSIHGR--FRVATENSVFAMPETALGLFPDIGASYF-----------------LSRLPG-F--FGEYVGLTG 167 (375)
Q Consensus 110 ~a~GgG~~Lala~D--~ria~~~a~f~~pe~~~G~~p~~g~~~~-----------------l~rl~g-~--~a~~l~ltG 167 (375)
.|.+.|..|++++| .|++.++++|-+.....|..-. .... +....| . ....++-.-
T Consensus 94 ~aaS~a~~il~aG~~g~R~~~pns~~miHq~~~~~~G~--~~di~~~~~el~~~~~~i~~i~a~~Tg~~~~~i~~~~~rD 171 (193)
T d1tg6a1 94 QAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQ--ATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERD 171 (193)
T ss_dssp EEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCSS--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHSSC
T ss_pred chHHHHHHHhhcCccCccccCcccHHHhcCCccCCCcC--HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccC
Confidence 99999999999999 6999999999998887666321 1111 001112 1 123333223
Q ss_pred CccCHHHHHHcCccceecCC
Q 017189 168 ARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 168 ~~i~A~eA~~~GLv~~vv~~ 187 (375)
.-++|+||+++||||+|+..
T Consensus 172 ~~lta~EAl~yGliD~Ii~~ 191 (193)
T d1tg6a1 172 RYMSPMEAQEFGILDKVLVH 191 (193)
T ss_dssp EEECHHHHHHHTSCSEECSS
T ss_pred ccCCHHHHHHcCCCCEEccC
Confidence 34999999999999999854
|
| >d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) species: Propionibacterium freudenreichii [TaxId: 1744]
Probab=97.60 E-value=0.0011 Score=58.74 Aligned_cols=139 Identities=13% Similarity=0.233 Sum_probs=86.0
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
..+-.|-.=+.-+++......+..+.+.+.++. +-+|.+.- |+|+-+.+-.... ..+ .........+..
T Consensus 92 ~v~a~Dftv~GGS~g~~~~~K~~~a~e~A~~~~-lPlV~l~~-----sgG~r~~eg~~~l---~~~-~~~~~~~~~ls~- 160 (253)
T d1on3a1 92 HAASQDFTVMGGSAGETQSTKVVETMEQALLTG-TPFLFFYD-----SGGARIQEGIDSL---SGY-GKMFFANVKLSG- 160 (253)
T ss_dssp EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEE-----ECSBCGGGTHHHH---HHH-HHHHHHHHHHTT-
T ss_pred hhhhchhhhhcccceecccchhhhhHHHHhhcC-CCeEEEEe-----cCCCcccccceec---ccc-ceehHHHHHHhc-
Confidence 333334444667899999999999999888764 44555543 2233333211000 111 111112223332
Q ss_pred CCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH----
Q 017189 100 TKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM---- 175 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA---- 175 (375)
..|+|+++.|+|.||+......||++|+.+++.+++. +...+. ..+|+.++.+|.
T Consensus 161 ~vP~i~vv~Gp~~GG~a~~~~~~d~vi~~~~a~i~~a-----------GP~vVe----------~~~ge~~~~eelGga~ 219 (253)
T d1on3a1 161 VVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT-----------GPQVIK----------SVTGEDVTADELGGAE 219 (253)
T ss_dssp TSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS-----------CHHHHH----------HHHCCCCCHHHHHSHH
T ss_pred cceEEEEEecCcccceeeccchhhheeccccceEEec-----------Ccchhh----------hhhCCcCChHhccCHH
Confidence 4899999999999999999999999999998776542 111111 135666665533
Q ss_pred ---HHcCccceecCCccH
Q 017189 176 ---RACGLATHFVPSSRL 190 (375)
Q Consensus 176 ---~~~GLv~~vv~~~~l 190 (375)
..-|.+|.++++++.
T Consensus 220 ~h~~~sG~iD~v~~~e~~ 237 (253)
T d1on3a1 220 AHMAISGNIHFVAEDDDA 237 (253)
T ss_dssp HHHHTTCCCSEEESSHHH
T ss_pred HhhhccccceEEECCHHH
Confidence 347999999998664
|
| >d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA species: Escherichia coli [TaxId: 562]
Probab=97.55 E-value=0.00054 Score=62.48 Aligned_cols=136 Identities=13% Similarity=0.055 Sum_probs=96.2
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEccc
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGI 110 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG~ 110 (375)
-+++++-...-.+.++.++.- ++-+|-|--.++ |-.|.+-++ ....+...+++..+..+.+|+|+.|-|-
T Consensus 130 G~~~p~~~rKa~r~~~~a~~~-~~Pii~~vDtpG-~~~g~~~E~--------~g~~~~~a~~~~~~~~~~vP~i~vv~g~ 199 (316)
T d2f9ya1 130 GMPAPEGYRKALRLMQMAERF-KMPIITFIDTPG-AYPGVGAEE--------RGQSEAIARNLREMSRLGVPVVCTVIGE 199 (316)
T ss_dssp GCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEESC-SCCSHHHHH--------TTHHHHHHHHHHHHHTCSSCEEEEEEEE
T ss_pred ccccHHHHHHHHHHHHHHHHc-CcceEEEEecCc-ccCCccccc--------ccHHHHHHHHHHHHHhCCCceEEEEEhh
Confidence 357888999988988888875 355555543333 333332222 2233456677888999999999999999
Q ss_pred cchhhhhhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch--HHHHHHhhcCCccCHHHHHHcCccceecCC
Q 017189 111 VMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG--FFGEYVGLTGARLDGAEMRACGLATHFVPS 187 (375)
Q Consensus 111 a~GgG~~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g--~~a~~l~ltG~~i~A~eA~~~GLv~~vv~~ 187 (375)
+.|||.-....+|.++|.++|.++ +..+-|+...|.+-.. ..+... ..+++++.+++|+||++++.
T Consensus 200 g~~gga~a~~~~d~v~m~~~a~~s-------vispEg~AsILwkd~~~a~eaAea----lklta~dL~~lgiIDeII~E 267 (316)
T d2f9ya1 200 GGSGGALAIGVGDKVNMLQYSTYS-------VISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIPE 267 (316)
T ss_dssp EEHHHHHTTCCCSEEEECTTCEEE-------SSCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCCC
T ss_pred hhchhhhhhhhhhHHHHHhhhHHh-------hccchhhhhHhhccchhhcchHHH----HhhhhHHHHHcCchhhcccC
Confidence 999999888889999999999987 3333444555555433 223322 34889999999999999964
|
| >d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.38 E-value=0.0037 Score=55.28 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=86.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
|..+..|..=+.-+++....+.+.++.+.+.+.. +-.|.|.-+|++ .+.+-... ............. ..
T Consensus 90 v~v~a~Dftv~gGS~g~~~~~K~~r~~e~A~~~~-lPlI~l~dsgGa-----rm~e~~~~----~~~~~~~~~~~~~-~s 158 (258)
T d1xnya1 90 VAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTG-CPVVGINDSGGA-----RIQEGVAS----LGAYGEIFRRNTH-AS 158 (258)
T ss_dssp EEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEECCCSB-----CGGGTHHH----HHHHHHHHHHHHH-TT
T ss_pred EEEEechhhhhcCccchhhHHHHHHHHHHHHHcC-CceEEEecCCCc-----ccCccccc----ccchhHHHHHHHH-Hc
Confidence 3444444444677899999999999999888764 566777654433 33221110 0111112222222 23
Q ss_pred CCCcEEEEEccccchhhhhhhhcCCEEEEeC-CeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH--
Q 017189 99 YTKPQVSILNGIVMGGGAGVSIHGRFRVATE-NSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM-- 175 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lala~D~ria~~-~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA-- 175 (375)
-..|+|+++.|+|.|||......||++|+.+ ++.+++. +...+. ..+|+.++.+|+
T Consensus 159 ~~vP~I~vv~G~~~gG~a~~~~~~~~vim~~~~a~i~~a-----------GP~vv~----------~~~ge~i~~eelgg 217 (258)
T d1xnya1 159 GVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT-----------GPDVIK----------TVTGEDVGFEELGG 217 (258)
T ss_dssp TTSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS-----------CHHHHH----------HHHCCCCCHHHHHB
T ss_pred CCCCEEEEEcCCcChhHHHHHHhccchhhcccceEEEec-----------CHHHHH----------HHhcCccChHHhcc
Confidence 4589999999999999999888899988876 4554321 111111 257888887774
Q ss_pred -----HHcCccceecCCc
Q 017189 176 -----RACGLATHFVPSS 188 (375)
Q Consensus 176 -----~~~GLv~~vv~~~ 188 (375)
..-|++|.+++++
T Consensus 218 a~~h~~~sG~~d~v~~de 235 (258)
T d1xnya1 218 ARTHNSTSGVAHHMAGDE 235 (258)
T ss_dssp HHHHHHTSSCCSEEESSH
T ss_pred HHHHHhcCCeeEEEeCCH
Confidence 4469999999864
|
| >d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Thermotoga maritima [TaxId: 2336]
Probab=97.37 E-value=0.002 Score=56.76 Aligned_cols=137 Identities=13% Similarity=0.232 Sum_probs=84.8
Q ss_pred EEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCC
Q 017189 21 ILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYT 100 (375)
Q Consensus 21 ~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 100 (375)
.+..|-.-..-+++......+.++.+.+.+.. +-+|.|... +|..+.+-... ............ ...-.
T Consensus 90 v~a~D~t~~gGs~g~~~~~K~~r~~e~A~~~~-~P~I~~~ds-----gG~r~~e~~~~----l~~~~~~~~~~~-~~s~~ 158 (251)
T d1vrga1 90 VFSQDFTVMGGSLGEMHAKKIVKLLDLALKMG-IPVIGINDS-----GGARIQEGVDA----LAGYGEIFLRNT-LASGV 158 (251)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEEE-----CSBCGGGTHHH----HHHHHHHHHHHH-HHTTT
T ss_pred EeeehhhhhhcccchHHHHHHHHHHHHHHHcC-CCEEEEEcC-----CCccccccccc----cccchHHHHHHH-HHCCC
Confidence 33334334567889888899999988887764 445555543 33444321110 001111222222 23456
Q ss_pred CcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH----
Q 017189 101 KPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM---- 175 (375)
Q Consensus 101 kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA---- 175 (375)
.|+|++|.|+|.||+......||++|+.++ +. +++. + |++ -. ..+|+.++.++.
T Consensus 159 iP~I~vv~G~~~gG~a~~~~~~d~~im~~~~a~-------i~~a----G----p~v-----v~-~~~ge~~~~eelGga~ 217 (251)
T d1vrga1 159 VPQITVIAGPCAGGAVYSPALTDFIVMVDQTAR-------MFIT----G----PNV-----IK-AVTGEEISQEDLGGAM 217 (251)
T ss_dssp SCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCB-------CBSS----C----HHH-----HH-HHHCCCCCHHHHHBHH
T ss_pred CCEEEEEccCccccceehhhhCceEEEEcccee-------EEec----C----chh-----hh-hhcCCcCChHHccchh
Confidence 999999999999999999999999998764 43 2221 1 111 11 257888887775
Q ss_pred ---HHcCccceecCCcc
Q 017189 176 ---RACGLATHFVPSSR 189 (375)
Q Consensus 176 ---~~~GLv~~vv~~~~ 189 (375)
.+-|++|.++++++
T Consensus 218 ~h~~~sG~~D~v~~de~ 234 (251)
T d1vrga1 218 VHNQKSGNAHFLADNDE 234 (251)
T ss_dssp HHHHTSCCCSEEESSHH
T ss_pred hhhhccccceEEECCHH
Confidence 35699999998753
|
| >d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD species: Escherichia coli [TaxId: 562]
Probab=97.27 E-value=0.0019 Score=57.39 Aligned_cols=140 Identities=12% Similarity=0.172 Sum_probs=86.4
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 20 RILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 20 ~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
..+..|-.=..-+++....+.+.++.+.+.+.. +-.|.++-. .|..+.+-.. ..............+...
T Consensus 99 ~v~a~Dftv~gGS~g~~~~~Ki~~a~e~A~~~~-lPlI~~~~s-----gG~r~~e~~~----sl~~~~~~~~~~~~~~~~ 168 (263)
T d2f9yb1 99 VAAAFEFAFMGGSMGSVVGARFVRAVEQALEDN-CPLICFSAS-----GGARMQEALM----SLMQMAKTSAALAKMQER 168 (263)
T ss_dssp BEEEECTTSTTTCBCTHHHHHHHHHHHHHHHHT-CCEEEEEEE-----SSBCGGGTHH----HHHHHHHHHHHHHHHHHT
T ss_pred EEEeeeehhhccccccchhhHHhHHHHHHHHcC-CCeEEEecC-----CCcccccccc----hhhcchhHHHHHHHHHhC
Confidence 334444444667899999999999999888754 456666543 3333332110 011122223333445567
Q ss_pred CCcEEEEEccccchhhh-hhhhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCcc-----CHH
Q 017189 100 TKPQVSILNGIVMGGGA-GVSIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARL-----DGA 173 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~-~Lala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i-----~A~ 173 (375)
..|+|+++.|+|.|||. .+++.+|++++.+++.+++.-. ..+.. .+|+.+ +++
T Consensus 169 ~vP~I~v~~g~~~GG~aa~~~~~~d~i~~~~~s~i~~aGP-----------~vve~----------~~ge~~~e~~g~a~ 227 (263)
T d2f9yb1 169 GLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFAGP-----------RVIEQ----------TVREKLPPGFQRSE 227 (263)
T ss_dssp TCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCH-----------HHHHH----------HHTSCCCTTTTBHH
T ss_pred CCceEEEecCCcchHHHhhhhhcCceEeeecceeeeccCH-----------HHHhh----------hcCCcCChhhccHH
Confidence 78999999999999986 5788888888888877654211 11111 233333 444
Q ss_pred HHHHcCccceecCCccH
Q 017189 174 EMRACGLATHFVPSSRL 190 (375)
Q Consensus 174 eA~~~GLv~~vv~~~~l 190 (375)
-..+.|+||.++++++.
T Consensus 228 ~~~~~G~iD~vv~~ee~ 244 (263)
T d2f9yb1 228 FLIEKGAIDMIVRRPEM 244 (263)
T ss_dssp HHGGGTCCSEECCHHHH
T ss_pred HHHhCCCCCEEECCHHH
Confidence 45578999999987654
|
| >d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Glutaconyl-CoA decarboxylase A subunit species: Acidaminococcus fermentans [TaxId: 905]
Probab=97.27 E-value=0.0005 Score=62.06 Aligned_cols=152 Identities=14% Similarity=0.037 Sum_probs=86.4
Q ss_pred CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEc
Q 017189 29 QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILN 108 (375)
Q Consensus 29 ~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavn 108 (375)
+.-+++....+.+.++++.+.+.. +-+|.|.-++ |+.+.+-.........+.+.++ -...+....+|+|++|-
T Consensus 116 ~gGs~~~~~~~K~~r~~~lA~~~~-lP~I~l~ds~-----Ga~~~~~~e~~~~~~~~g~~~~-~~a~ls~~~VP~Isvv~ 188 (287)
T d1pixa2 116 LAGAWVPGQAECLLRASDTAKTLH-VPLVYVLNCS-----GVKFDEQEKVYPNRRGGGTPFF-RNAELNQLGIPVIVGIY 188 (287)
T ss_dssp TTTEECTTHHHHHHHHHHHHHHHT-CCEEEEECCC-----EECGGGHHHHSSSTTSTTHHHH-HHHHHHHTTCCEEEEEC
T ss_pred ccccchhhHHHHHHHHHHhhhhcC-CCEEEEecCC-----cccCCcchhhccchhhHHHHHH-HHHHHhhcCCCeEEEec
Confidence 556888899999999988887753 5566555433 3333221110000001111122 22345667899999999
Q ss_pred cccchhhhhhhhcCCEEEEeCCeEEecc--ccccCCCCCccHHHHHhhcchHH-HHHHhhcCCccCHHHHH--HcCccce
Q 017189 109 GIVMGGGAGVSIHGRFRVATENSVFAMP--ETALGLFPDIGASYFLSRLPGFF-GEYVGLTGARLDGAEMR--ACGLATH 183 (375)
Q Consensus 109 G~a~GgG~~Lala~D~ria~~~a~f~~p--e~~~G~~p~~g~~~~l~rl~g~~-a~~l~ltG~~i~A~eA~--~~GLv~~ 183 (375)
|.|.|||...+++||++++.+++.+.+. .+--+..+..+........+... .. -.+-+.+.+.+.+ ..|++|.
T Consensus 189 G~~~gGgAy~~~~~~~i~~~~~a~i~~~Gp~vv~~~~~~~~~~~~~~~ei~~~~ge--~~~~eeLGGa~~H~~~sG~~d~ 266 (287)
T d1pixa2 189 GTNPAGGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDR--TGKTEPPGAVDIHYTETGFMRE 266 (287)
T ss_dssp SEEETHHHHHHHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHHHHHT--TCCCCCSSBHHHHTTTSCCSCE
T ss_pred CCccccceeccccceeEEecCCeEEEEECHHHhcccchhhhhhhhhHHHHHhhhcc--cccccccccHHHhhhhccccee
Confidence 9999999888888888888998887763 22222333222211111111100 11 1234445555544 4699999
Q ss_pred ecCCcc
Q 017189 184 FVPSSR 189 (375)
Q Consensus 184 vv~~~~ 189 (375)
++++++
T Consensus 267 v~~~e~ 272 (287)
T d1pixa2 267 VYASEE 272 (287)
T ss_dssp EESSHH
T ss_pred ecCCHH
Confidence 998753
|
| >d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.14 E-value=0.0066 Score=53.57 Aligned_cols=138 Identities=17% Similarity=0.199 Sum_probs=85.8
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHh
Q 017189 19 VRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMAT 98 (375)
Q Consensus 19 v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~ 98 (375)
|.++..|-.-+.-+++....+.+.++.+.+.++. +-+|.|.-+| |..+.+-... ............ ...
T Consensus 91 v~v~a~Dft~~gGS~g~~~g~K~~ra~e~A~~~~-lP~I~l~dsg-----Gar~~eg~~~----~~~~~~~~~~~~-~~~ 159 (258)
T d2a7sa1 91 VCIFSQDATVFGGSLGEVYGEKIVKVQELAIKTG-RPLIGINDGA-----GARIQEGVVS----LGLYSRIFRNNI-LAS 159 (258)
T ss_dssp EEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEECCC-----SBCGGGCTHH----HHHHHHHHHHHH-HHT
T ss_pred EEEecccceEeCCccchhhhhHHHHHHHHHHhcC-CceEEEeccC-----Cccccccccc----ccchhhHHHHHH-HHc
Confidence 3444444444677899999999999999888764 5556555433 3333321000 111112222222 234
Q ss_pred CCCcEEEEEccccchhhhhhhhcCCEEEEeCC-eEEeccccccCCCCCccHHHHHhhcchHHHHHHhhcCCccCHHHH--
Q 017189 99 YTKPQVSILNGIVMGGGAGVSIHGRFRVATEN-SVFAMPETALGLFPDIGASYFLSRLPGFFGEYVGLTGARLDGAEM-- 175 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~G~~p~~g~~~~l~rl~g~~a~~l~ltG~~i~A~eA-- 175 (375)
-..|+|+++.|+|.|||......||++|+.++ +.++ +. +...+ . ..+|+.++.++.
T Consensus 160 ~~vP~I~~v~G~~~gG~a~~~~~~d~~vm~~~~a~i~-------~a----GP~vV---------~-~~~ge~~~~eeLGg 218 (258)
T d2a7sa1 160 GVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMF-------IT----GPDVI---------K-TVTGEEVTMEELGG 218 (258)
T ss_dssp TTSCEEEEECSCCBSGGGHHHHHSSEEEEEBTTBBCB-------SS----CHHHH---------H-HHHCCCCCHHHHHB
T ss_pred CCCCEEEEEecCcccHHHHHHHhccceEeecCceEEE-------cc----ChhHH---------H-HhcCCccChhhccC
Confidence 56999999999999999999999999998654 4432 21 11111 1 247788877754
Q ss_pred -----HHcCccceecCCc
Q 017189 176 -----RACGLATHFVPSS 188 (375)
Q Consensus 176 -----~~~GLv~~vv~~~ 188 (375)
.+.|.+|.+++++
T Consensus 219 a~~h~~~sG~~D~v~~de 236 (258)
T d2a7sa1 219 AHTHMAKSGTAHYAASGE 236 (258)
T ss_dssp HHHHHHTSCCCSEEESSH
T ss_pred HhHhhhhccccceEeCCH
Confidence 3579999999864
|
| >d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.52 E-value=0.021 Score=50.53 Aligned_cols=158 Identities=15% Similarity=0.168 Sum_probs=102.1
Q ss_pred eCCEEEEEEcCCCC-CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPRQ-LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY 94 (375)
Q Consensus 16 ~~~v~~itlnrp~~-~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~ 94 (375)
.|...-|.-|+|.. ..+++.+-.....+.++.++.. ++-.|.|.-.+ .|..|.+... ....+...+++.
T Consensus 68 ~G~~vgvian~~~~~~G~~~~~~~~Ka~rfi~lc~~~-~iPlv~l~dtp-Gf~~G~~~E~--------~g~~~~ga~~~~ 137 (271)
T d2a7sa2 68 DGRPVGIVANQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDVP-GFLPGTDQEY--------NGIIRRGAKLLY 137 (271)
T ss_dssp SSCEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH--------HCHHHHHHHHHH
T ss_pred CCeEEEEEeccccccCCCcCHHHHHHHHHHHHHHHHh-CCceEEeechh-hhhhhccHHH--------hhHHHHHHHHHH
Confidence 34444455566542 3589999999999999999875 56777776543 3666654332 223456677889
Q ss_pred HHHhCCCcEEEEEccccchhhhhh----hhcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhc-chH-----------
Q 017189 95 LMATYTKPQVSILNGIVMGGGAGV----SIHGRFRVATENSVFAMPETALGLFPDIGASYFLSRL-PGF----------- 158 (375)
Q Consensus 95 ~i~~~~kPvIAavnG~a~GgG~~L----ala~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl-~g~----------- 158 (375)
++..+..|.|+.|-|.++|||... .+.+|+++|-+++.++ +.++-|+...+.+. +..
T Consensus 138 a~a~~~vP~isvi~~~~~G~~~~am~~~~~~~d~~~AwP~A~ig-------vMgpegaa~v~~~~~l~~~~~~~~~~~~~ 210 (271)
T d2a7sa2 138 AYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAAANGEDIDKL 210 (271)
T ss_dssp HHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTTTTTTGGGTSSCCTTSS
T ss_pred HHHhCCCCeEEEEeCCccchhhhhhcccccccceEEEecceeEe-------ecCHHHHHHHHHHHhhhhhhhcccchHHH
Confidence 999999999999999999987542 2346888776666654 44444444443332 110
Q ss_pred HHH-HHhhcCCccCHHHHHHcCccceecCCccH
Q 017189 159 FGE-YVGLTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 159 ~a~-~l~ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
+.. ..-..-..-++-.|...|++|.|+++.+.
T Consensus 211 ~~~~~~e~~e~~~~p~~aa~~g~iD~VIdP~dT 243 (271)
T d2a7sa2 211 RLRLQQEYEDTLVNPYVAAERGYVDAVIPPSHT 243 (271)
T ss_dssp TTHHHHHHHTTTSBSHHHHHHTSSSEECCGGGH
T ss_pred HHHHHHHHHHHhcCHHHHHHcCCCCeeECHHHH
Confidence 001 11112233467788889999999999875
|
| >d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) species: Propionibacterium freudenreichii [TaxId: 1744]
Probab=96.49 E-value=0.02 Score=50.40 Aligned_cols=153 Identities=14% Similarity=0.119 Sum_probs=98.6
Q ss_pred EEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhC
Q 017189 21 ILTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATY 99 (375)
Q Consensus 21 ~itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~ 99 (375)
-|.=|+|. ...+++.+-.....+.++.++.- ++-.|.|.-. ..|..|.+-+. ....+...+++.++.++
T Consensus 70 gvian~~~~~~G~~~~~~a~Kaarfi~lc~~~-~iPlv~l~D~-pGf~~G~~~E~--------~g~i~~ga~~~~a~a~~ 139 (264)
T d1on3a2 70 GIVANQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDV-PGFLPGVQQEY--------GGIIRHGAKMLYAYSEA 139 (264)
T ss_dssp EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHH--------TTHHHHHHHHHHHHHHC
T ss_pred EEEeccchhcccccChHHHHHHHHHHHHHHhc-CCceEEEecc-ccccccHHHHH--------HHHHHHHHHHHHHHHcC
Confidence 34445554 35689999999999999988874 5667766544 23666654322 23456677889999999
Q ss_pred CCcEEEEEccccchhhhhhh----hcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcc-h----H---HHHHH-hhc
Q 017189 100 TKPQVSILNGIVMGGGAGVS----IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLP-G----F---FGEYV-GLT 166 (375)
Q Consensus 100 ~kPvIAavnG~a~GgG~~La----la~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~-g----~---~a~~l-~lt 166 (375)
.+|.|+.|=|.++|+|..-. ..+|+++|-+++ .+|..++-|+...+.+.- . . ....+ -..
T Consensus 140 ~vP~itvi~rkayG~g~~am~g~~~~~d~~~aWP~A-------~~~vMg~Egaa~v~~~~el~a~~~~~~~~~~~~~e~~ 212 (264)
T d1on3a2 140 TVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSA-------EIAVMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQ 212 (264)
T ss_dssp CSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTC-------EEESSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeccccCccccccccccCChhheeeHHhh-------HhhhccHHHHHHHHHhhhhhhhhhhhhhhHHHHHHHH
Confidence 99999999999999875433 245666655555 455655555554443321 0 0 01111 111
Q ss_pred CCccCHHHHHHcCccceecCCccH
Q 017189 167 GARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 167 G~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
-..-++-.|...|.+|.|+++.+.
T Consensus 213 ~~~~~p~~aA~~g~iD~VIdP~eT 236 (264)
T d1on3a2 213 NAFNTPYVAAARGQVDDVIDPADT 236 (264)
T ss_dssp HHHSSHHHHHHTTSSSEECCGGGH
T ss_pred HHhcCHHHHHHcCCCCeeECHHHH
Confidence 122356778889999999999775
|
| >d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Streptomyces coelicolor [TaxId: 1902]
Probab=96.37 E-value=0.022 Score=50.15 Aligned_cols=158 Identities=16% Similarity=0.130 Sum_probs=100.2
Q ss_pred eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY 94 (375)
Q Consensus 16 ~~~v~~itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~ 94 (375)
+|.-.-|.-|+|. ...+++.+......+.++.++.. ++=.|.|.-.. .|..|.+-+. ....+...+++.
T Consensus 63 ~G~~vgvia~~~~~~~G~~~~~~a~Ka~~fi~lc~~~-~iPli~l~d~p-Gf~~G~~~E~--------~g~~~~ga~~~~ 132 (263)
T d1xnya2 63 EGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVP-GFLPGVDQEH--------DGIIRRGAKLIF 132 (263)
T ss_dssp TTEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH--------TTHHHHHHHHHH
T ss_pred ccceEEEEecccceecCCcchhhHHHHHHHHHHHHHh-CCceEEeeccc-ccccchhHHH--------HhHHHHHHHHHH
Confidence 3333334445554 34589999999999999999875 46666665443 2666654322 234566678889
Q ss_pred HHHhCCCcEEEEEccccchhhhhhhh----cCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcchH--------HHHH
Q 017189 95 LMATYTKPQVSILNGIVMGGGAGVSI----HGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPGF--------FGEY 162 (375)
Q Consensus 95 ~i~~~~kPvIAavnG~a~GgG~~Lal----a~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g~--------~a~~ 162 (375)
++.++..|.|+.|-|.++|||..... ..|+++|.+++.+ |+.++-|+...+.+.-.. ....
T Consensus 133 a~a~~~vPkitvi~~~~~Gga~~~m~~~~~~~d~~~awP~a~~-------gvm~pe~aa~il~~~~~~~a~~~~~~~~~~ 205 (263)
T d1xnya2 133 AYAEATVPLITVITRKAFGGAYDVMGSKHLGADLNLAWPTAQI-------AVMGAQGAVNILHRRTIADAGDDAEATRAR 205 (263)
T ss_dssp HHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTHHHHHSCCTTCSSSHHH
T ss_pred HHHccCCCeEEEEecCccccceeccCCcccCCcEEEEcchhhh-------hccCHHHHHHHHHHHHHhhhccchHHHHHH
Confidence 99999999999999999998765432 4678877766665 455444444444322110 0000
Q ss_pred Hh--hcCCccCHHHHHHcCccceecCCccH
Q 017189 163 VG--LTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 163 l~--ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
+. ..-...++..+...|.+|.|+++.+.
T Consensus 206 ~~~~~~~~~~~p~~aA~~g~iD~VIdP~dT 235 (263)
T d1xnya2 206 LIQEYEDALLNPYTAAERGYVDAVIMPSDT 235 (263)
T ss_dssp HHHHHHHHHSSSHHHHHHTSSSEECCGGGH
T ss_pred HHHHHHHHhcCHHHHHHcccCCcccCHHHH
Confidence 00 01112356778889999999999886
|
| >d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Propionyl-CoA carboxylase complex B subunit, PccB species: Thermotoga maritima [TaxId: 2336]
Probab=96.27 E-value=0.029 Score=49.37 Aligned_cols=158 Identities=10% Similarity=0.085 Sum_probs=100.6
Q ss_pred eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHH
Q 017189 16 TSFVRILTLNRPR-QLNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNY 94 (375)
Q Consensus 16 ~~~v~~itlnrp~-~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~ 94 (375)
.|...-+.-|+|. ...+++.+-.....+.++.++.. ++=.|.|.-. ..|..|.+-.. ....+...+++.
T Consensus 65 ~G~~vgvian~~~~~~G~~~~~~a~Kaa~fi~lc~~~-~iPli~l~Dt-pGf~~G~~~E~--------~g~~~~ga~~~~ 134 (264)
T d1vrga2 65 QGKTVGIVANQPSVLAGVLDIDSSDKAARFIRFLDAF-NIPILTFVDT-PGYLPGVAQEH--------GGIIRHGAKLLY 134 (264)
T ss_dssp TTEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHH--------TTHHHHHHHHHH
T ss_pred cCceEEEEeccccccccchhhhhHHHHHHHHHHHHHh-CCceEEEeec-ccccccHHHHH--------HhHHHHHHHHHH
Confidence 3433334455654 33579999999999999998875 4666666543 23666654322 234556678889
Q ss_pred HHHhCCCcEEEEEccccchhhhhhh----hcCCEEEEeCCeEEeccccccCCCCCccHHHHHhhcch-----H--HHHHH
Q 017189 95 LMATYTKPQVSILNGIVMGGGAGVS----IHGRFRVATENSVFAMPETALGLFPDIGASYFLSRLPG-----F--FGEYV 163 (375)
Q Consensus 95 ~i~~~~kPvIAavnG~a~GgG~~La----la~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~rl~g-----~--~a~~l 163 (375)
++..+.+|.|+.|=|.++|+|..-. +.+|+++|-+++.+ |+..+-++...+.+.-- . ....+
T Consensus 135 a~a~~~vP~i~viir~~yG~g~~am~~~~~~~d~~~awP~a~~-------~vm~pe~aa~v~~~~~l~~~~~~~~~~~~~ 207 (264)
T d1vrga2 135 AYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEI-------AVMGPEGAANIIFKREIEASSNPEETRRKL 207 (264)
T ss_dssp HHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEE-------ESSCHHHHHHHHTHHHHHHSSCHHHHHHHH
T ss_pred HHhcCCCCEEEEEeCCcccHHhhhccCCccCCCeeeeccceeE-------EecCHHHhhhhhhhhhhhhhhCcHHHHHHH
Confidence 9999999999999999999876322 25788877666654 45544444444432210 0 00000
Q ss_pred --hhcCCccCHHHHHHcCccceecCCccH
Q 017189 164 --GLTGARLDGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 164 --~ltG~~i~A~eA~~~GLv~~vv~~~~l 190 (375)
...-+.-++-.+...|++|.|+++.+.
T Consensus 208 ~~~~~e~~~~~~~aa~~g~iD~VIdP~dT 236 (264)
T d1vrga2 208 IEEYKQQFANPYIAASRGYVDMVIDPRET 236 (264)
T ss_dssp HHHHHHHTSSHHHHHHTTSSSEECCGGGH
T ss_pred HHHHHHHhcCHHHHHHcCCCCeeECHHHH
Confidence 011122367788899999999999876
|
| >d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.53 E-value=0.21 Score=45.94 Aligned_cols=108 Identities=13% Similarity=0.198 Sum_probs=68.3
Q ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEE--c
Q 017189 31 NALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSIL--N 108 (375)
Q Consensus 31 Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAav--n 108 (375)
-.+.++-.....+++..+.+..++-+|+|.-. ..|+.|.+-.. ....+....++.++.++..|+|+.| .
T Consensus 108 gv~~p~sA~K~A~~i~d~cd~~~lPLi~l~D~-pGF~~G~~~E~--------~gilr~GA~iv~A~~~~~vP~i~vI~~~ 178 (404)
T d1uyra2 108 QVWHPNSAFKTAQAINDFNNGEQLPMMILANW-RGFSGGQRDMF--------NEVLKYGSFIVDALVDYKQPIIIYIPPT 178 (404)
T ss_dssp TCBCHHHHHHHHHHHHHHHTTSCCCEEECCCC-CCBCC--------------CTHHHHHHHHHHHHHTCCSCEEEEECTT
T ss_pred CccCchHHHHHHHHHHHhhhccccceEEeecC-CcccCcHHHHH--------HHHHHHHHHHHHHHHhcCCCEEEEEeCC
Confidence 46778888888888887766566777777544 45888865321 2334556678889999999999999 6
Q ss_pred cccchhhhhhhh---cCCEEEEeCCeEEeccccccCCCCCccHHHHH
Q 017189 109 GIVMGGGAGVSI---HGRFRVATENSVFAMPETALGLFPDIGASYFL 152 (375)
Q Consensus 109 G~a~GgG~~Lal---a~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l 152 (375)
|.+.||.+.++- ..+.. ..|+.|..+.|+.++-|+.-..
T Consensus 179 g~~~GGa~vv~~~~~~~~~~-----~~yAwP~a~~gVm~pEGav~I~ 220 (404)
T d1uyra2 179 GELRGGSWVVVDPTINADQM-----EMYADVNARAGVLEPQGMVGIK 220 (404)
T ss_dssp CEEEHHHHHTTCGGGGTTTE-----EEEEETTCEEESSCHHHHHHHH
T ss_pred cccchhhhhcccCccCCccc-----eEEECCccccccCChhhhhhhe
Confidence 777776544332 11211 2355566667777666665444
|
| >d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Glutaconyl-CoA decarboxylase A subunit species: Acidaminococcus fermentans [TaxId: 905]
Probab=93.91 E-value=0.42 Score=42.32 Aligned_cols=146 Identities=14% Similarity=0.081 Sum_probs=91.2
Q ss_pred CCCCCHHHHHHHHHHHHHhhcCCCceEEEEeeCCCCccccCCchhHhhccchhhHHHHHHHHHHHHHHhCCCcEEEEEcc
Q 017189 30 LNALSAQMISRLLELFQRYETDSNVKLLILKGKGRAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNG 109 (375)
Q Consensus 30 ~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~l~~~i~~~~kPvIAavnG 109 (375)
.-+|+.+......+.++.+++. ++-+|.|.-. ..|-.|.+-+. ....+...+++.++..+.+|.|+.|=|
T Consensus 96 ~G~l~~~~a~K~~rfi~lc~~~-~iPlv~l~D~-pGf~~g~~~E~--------~g~~r~ga~~~~a~~~~~VP~isvi~r 165 (299)
T d1pixa3 96 GGKLYRQGLVKMNEFVTLCARD-RLPIVWIQDT-TGIDVGNDAEK--------AELLGLGQSLIYSIQTSHIPQFEITLR 165 (299)
T ss_dssp TTEECHHHHHHHHHHHHHHHHT-TCCEEEEECC-CEECCSHHHHH--------TTHHHHHHHHHHHHHTCCCCEEEEECS
T ss_pred CCccCHHHHHHHHHHHHHHHHc-CCeEEEEEeC-CCcccchHHHh--------hhHHHHHHHHHHHHHhhcceeEEEEec
Confidence 4578999999999999999885 4566666433 22666643321 224456667888999999999999999
Q ss_pred ccchhhhhhhh----cCCEEEEeCCeEEeccccccCCCCCccHHHHHh-hcchH----------H-H--HHHh-hcCCcc
Q 017189 110 IVMGGGAGVSI----HGRFRVATENSVFAMPETALGLFPDIGASYFLS-RLPGF----------F-G--EYVG-LTGARL 170 (375)
Q Consensus 110 ~a~GgG~~Lal----a~D~ria~~~a~f~~pe~~~G~~p~~g~~~~l~-rl~g~----------~-a--~~l~-ltG~~i 170 (375)
.++|||..... ..|++++ +..|...+|..++-++...+. +-+.. . . ..+. -.-+..
T Consensus 166 ~~~G~a~~am~g~~~~~~~~~~-----~awP~aeigvMg~E~aa~vl~~~el~~~~~~~~~~~e~~e~~~~~~~~~~~~~ 240 (299)
T d1pixa3 166 KGTAAAHYVLGGPQGNDTNAFS-----IGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQAFYTKS 240 (299)
T ss_dssp EEETTHHHHTTCTTCTTTEEEE-----EECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccccCccCccccee-----cCCCccccccccchhhheeehhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhc
Confidence 99998854332 2343321 233555566665554444432 21110 0 0 1110 011235
Q ss_pred CHHHHHHcCccceecCCccH
Q 017189 171 DGAEMRACGLATHFVPSSRL 190 (375)
Q Consensus 171 ~A~eA~~~GLv~~vv~~~~l 190 (375)
++..|...|+||.|+++.+.
T Consensus 241 sp~~aAs~~~iD~IIDP~dT 260 (299)
T d1pixa3 241 RPKVCAELGLVDEIVDMNKI 260 (299)
T ss_dssp SHHHHHHHTSSSEECCTTTH
T ss_pred CHHHHHHhCCcCeeECHHHH
Confidence 77788899999999999875
|
| >d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ClpP/crotonase superfamily: ClpP/crotonase family: Biotin dependent carboxylase carboxyltransferase domain domain: Acetyl-coenzyme A carboxylase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.87 E-value=0.017 Score=52.38 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=32.9
Q ss_pred CCCcEEEEEccccchhhhhhhhcCCEEEEeCCeEEe
Q 017189 99 YTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFA 134 (375)
Q Consensus 99 ~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~ 134 (375)
-..|+|++|.|.|+|+|.-++..||++|+.+++.+.
T Consensus 239 ~~iptis~v~G~~vG~gAyl~~L~d~vIm~~~s~i~ 274 (333)
T d1uyra1 239 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPII 274 (333)
T ss_dssp HHSCEEEEESSCEETHHHHHHHHTCCEEEETTCCEE
T ss_pred CCCCEEEEEeCCccccceeecccccEEEEeCCceEE
Confidence 359999999999999999999999999999988654
|